Tumor_Sample_Barcode Fusion Junction Spanning Breakpoint1 Breakpoint2 Type oncogenic LEVEL_1 LEVEL_2A LEVEL_2B LEVEL_3A LEVEL_3B LEVEL_4 LEVEL_R1 Highest_level TCGA-OR-A5J1-01A-11R-A29S-07 RHOF-HEXDC 51 268 chr12:121801707:- chr17:82440997:+ . NA TCGA-OR-A5J1-01A-11R-A29S-07 PRLR-CLPTM1L 22 103 chr5:35230268:- chr5:1318453:- . NA TCGA-OR-A5J1-01A-11R-A29S-07 NCAPD2-MRPL48 23 51 chr12:6494154:+ chr11:73805027:+ . NA TCGA-OR-A5J1-01A-11R-A29S-07 DAB2-ARSB 13 59 chr5:39392365:- chr5:78969192:- INFRAME NA TCGA-OR-A5J1-01A-11R-A29S-07 TBCA-ARSB 5 16 chr5:77708242:- chr5:78839426:- FRAMESHIFT NA TCGA-OR-A5J1-01A-11R-A29S-07 DAB2-COL4A3BP 4 18 chr5:39424804:- chr5:75459181:- . NA TCGA-OR-A5J1-01A-11R-A29S-07 TBCD-GLIPR2 3 15 chr17:82884202:+ chr9:36147786:+ FRAMESHIFT NA TCGA-OR-A5J1-01A-11R-A29S-07 C9-COL4A3BP 4 10 chr5:39424804:- chr5:75459181:- . NA TCGA-OR-A5J1-01A-11R-A29S-07 CWC27-PLPP1 5 5 chr5:64885546:+ chr5:55426039:- FRAMESHIFT NA TCGA-OR-A5J1-01A-11R-A29S-07 DYNC1I1-ASB4 4 9 chr7:95869998:+ chr7:95495758:+ INFRAME NA TCGA-OR-A5J1-01A-11R-A29S-07 UIMC1-DBN1 3 13 chr5:176943335:- chr5:177468899:- FRAMESHIFT NA TCGA-OR-A5J1-01A-11R-A29S-07 KMT2A-ATP5L 2 15 chr11:118482495:+ chr11:118431024:+ INFRAME Likely Oncogenic NA TCGA-OR-A5J1-01A-11R-A29S-07 MIER3-KIF2A 3 9 chr5:56935428:- chr5:62385484:+ INFRAME NA TCGA-OR-A5J1-01A-11R-A29S-07 RBM14-BBS1 1 17 chr11:66618561:+ chr11:66515540:+ . NA TCGA-OR-A5J1-01A-11R-A29S-07 HNRNPUL1-CLIP3 1 11 chr19:41268345:+ chr19:36032766:- . NA TCGA-OR-A5J1-01A-11R-A29S-07 NRG4-SCNN1D 1 9 chr15:76009200:- chr1:1290477:+ FRAMESHIFT NA TCGA-OR-A5J1-01A-11R-A29S-07 TNPO1-MEF2C 2 3 chr5:72816752:+ chr5:88761328:- INFRAME NA TCGA-OR-A5J1-01A-11R-A29S-07 PAPD4-GPBP1 1 5 chr5:79613075:+ chr5:57175448:+ . NA TCGA-OR-A5J1-01A-11R-A29S-07 GIGYF2-HSCB 1 3 chr2:232794944:+ chr22:28751241:+ FRAMESHIFT NA TCGA-OR-A5J2-01A-11R-A29S-07 ASXL2-PPWD1 2 17 chr2:25806229:- chr5:65576879:+ INFRAME Likely Oncogenic NA TCGA-OR-A5J2-01A-11R-A29S-07 AJAP1-CYTH3 1 13 chr1:4655454:+ chr7:6190531:- FRAMESHIFT NA TCGA-OR-A5J3-01A-11R-A29S-07 ASB4-DYNC1I1 1 1 chr7:95536550:+ chr7:95804721:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 KIF1B-FAM58A 50 448 chr1:10232434:+ chrX:153596187:- INFRAME Likely Oncogenic NA TCGA-OR-A5J7-01A-11R-A29S-07 FLVCR2-BATF 49 328 chr14:75579641:+ chr14:75546462:+ INFRAME NA TCGA-OR-A5J7-01A-11R-A29S-07 PRX-BLVRB 54 162 chr19:40398620:- chr19:40448046:- FRAMESHIFT NA TCGA-OR-A5J7-01A-11R-A29S-07 PDXK-RRP1B 32 131 chr21:43758542:+ chr21:43694893:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 ASPSCR1-HGS 25 93 chr17:81985607:+ chr17:81700467:+ FRAMESHIFT NA TCGA-OR-A5J7-01A-11R-A29S-07 SCMH1-CA6 19 82 chr1:41033983:- chr1:8949263:+ INFRAME NA TCGA-OR-A5J7-01A-11R-A29S-07 MAPKAPK5-ALDH2 9 57 chr12:111842769:+ chr12:111803859:+ INFRAME NA TCGA-OR-A5J7-01A-11R-A29S-07 PEBP1-DENND4B 4 76 chr12:118139551:+ chr1:153936188:- FRAMESHIFT NA TCGA-OR-A5J7-01A-11R-A29S-07 NFE2L1-NPEPPS 10 41 chr17:48048462:+ chr17:47596353:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 NR5A1-NR6A1 5 43 chr9:124500090:- chr9:124524873:- FRAMESHIFT NA TCGA-OR-A5J7-01A-11R-A29S-07 CSNK1G1-CS 4 42 chr15:64355988:- chr12:56286645:- . NA TCGA-OR-A5J7-01A-11R-A29S-07 GTF2I-FLAD1 7 28 chr7:74658068:+ chr1:154988105:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 KDM4B-CCDC94 8 23 chr19:5047669:+ chr19:4247119:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 SBNO2-TULP2 5 34 chr19:1168694:- chr19:48889631:- . NA TCGA-OR-A5J7-01A-11R-A29S-07 TMEM87B-PVT1 5 24 chr2:112081118:+ chr8:127890589:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 PGAP1-HSPD1 5 16 chr2:196885424:- chr2:197497392:- INFRAME NA TCGA-OR-A5J7-01A-11R-A29S-07 RCOR1-PPP2R5C 3 21 chr14:102681978:+ chr14:101856686:+ INFRAME NA TCGA-OR-A5J7-01A-11R-A29S-07 MAP4-ENPP7P14 5 10 chr3:47928228:- chr16:5111430:- . NA TCGA-OR-A5J7-01A-11R-A29S-07 NDEL1-KCNB1 2 17 chr17:8454887:+ chr20:49310799:- . NA TCGA-OR-A5J7-01A-11R-A29S-07 ELMSAN1-ALDH6A1 2 13 chr14:73787102:- chr14:74075017:- . NA TCGA-OR-A5J7-01A-11R-A29S-07 EXOSC10-MTOR 2 9 chr1:11079711:- chr1:11130777:- INFRAME NA TCGA-OR-A5J7-01A-11R-A29S-07 PVT1-MERTK 2 9 chr8:127794734:+ chr2:111965191:+ . NA TCGA-OR-A5J7-01A-11R-A29S-07 AS3MT-SUFU 2 7 chr10:102890678:+ chr10:102597140:+ INFRAME NA TCGA-OR-A5J8-01A-11R-A29S-07 AARS2-SPATS1 184 1079 chr6:44310994:- chr6:44360446:+ INFRAME NA TCGA-OR-A5J8-01A-11R-A29S-07 EIF4H-AARS2 118 449 chr7:74174442:+ chr6:44312263:- FRAMESHIFT NA TCGA-OR-A5J8-01A-11R-A29S-07 CAPRIN1-CD151 8 65 chr11:34090678:+ chr11:838133:+ INFRAME NA TCGA-OR-A5J8-01A-11R-A29S-07 NFKBIE-FBXO9 1 15 chr6:44262560:- chr6:53071057:+ INFRAME NA TCGA-OR-A5J8-01A-11R-A29S-07 RNF185-SMTN 1 6 chr22:31192702:+ chr22:31095303:+ INFRAME NA TCGA-OR-A5J8-01A-11R-A29S-07 DDR2-ATF6 1 3 chr1:162655374:+ chr1:161958446:+ . NA TCGA-OR-A5J9-01A-11R-A29S-07 PPP2R5C-PRKD1 2 33 chr14:101810036:+ chr14:29599817:- FRAMESHIFT NA TCGA-OR-A5J9-01A-11R-A29S-07 ITPKA-NUSAP1 2 13 chr15:41494416:+ chr15:41342386:+ INFRAME NA TCGA-OR-A5J9-01A-11R-A29S-07 NCS1-GPR107 3 9 chr9:130172727:+ chr9:130127483:+ FRAMESHIFT NA TCGA-OR-A5J9-01A-11R-A29S-07 RAD51B-BAZ1A 2 3 chr14:67887204:+ chr14:34758846:- FRAMESHIFT NA TCGA-OR-A5JA-01A-11R-A29S-07 HELLPAR-NTN4 3 19 chr12:102315490:+ chr12:95683711:- . NA TCGA-OR-A5JA-01A-11R-A29S-07 PAH-METAP2 4 10 chr12:102894735:- chr12:95512801:+ INFRAME NA TCGA-OR-A5JA-01A-11R-A29S-07 VCP-FAM214B 5 6 chr9:35072337:- chr9:35108737:- . NA TCGA-OR-A5JA-01A-11R-A29S-07 NTN4-PAH 2 16 chr12:95682707:- chr12:102894918:- FRAMESHIFT NA TCGA-OR-A5JA-01A-11R-A29S-07 MIAT-CRYBA4 2 11 chr22:26657654:+ chr22:26630340:+ . NA TCGA-OR-A5JA-01A-11R-A29S-07 SLC44A2-LDLR 1 6 chr19:10635515:+ chr19:11131281:+ INFRAME NA TCGA-OR-A5JA-01A-11R-A29S-07 FRS2-NTN4 1 4 chr12:69470530:+ chr12:95670146:- . NA TCGA-OR-A5JB-01A-11R-A29S-07 ST3GAL3-EBNA1BP2 6 5 chr1:43707693:+ chr1:43261918:- . NA TCGA-OR-A5JC-01A-11R-A29S-07 FAM19A4-LMOD3 3 9 chr3:68880730:- chr3:69122409:- . NA TCGA-OR-A5JC-01A-11R-A29S-07 PPP2R5E-XRCC3 3 1 chr14:63415140:- chr14:103711567:- . NA TCGA-OR-A5JC-01A-11R-A29S-07 HERC1-DAPK2 1 3 chr15:63664470:- chr15:63983754:- FRAMESHIFT NA TCGA-OR-A5JD-01A-11R-A29S-07 MALAT1-FAM166A 15 79 chr11:65502076:+ chr9:137245222:- . NA TCGA-OR-A5JE-01A-11R-A29S-07 SETX-RAB14 7 18 chr9:132354917:- chr9:121193419:- . NA TCGA-OR-A5JE-01A-11R-A29S-07 SLC12A4-DPEP2 1 19 chr16:67957742:- chr16:67999748:- . NA TCGA-OR-A5JF-01A-11R-A29S-07 SNHG19-USP49 155 856 chr16:2155143:- chr6:41799938:- . NA TCGA-OR-A5JF-01A-11R-A29S-07 FAM96B-CYFIP1 1 2 chr16:66933614:- chr15:22932340:- FRAMESHIFT NA TCGA-OR-A5JK-01A-11R-A29S-07 JADE2-UBE2B 3 29 chr5:134526011:+ chr5:134390225:+ . NA TCGA-OR-A5JK-01A-11R-A29S-07 ZBTB38-C17orf64 2 15 chr3:141369946:+ chr17:60431181:+ . NA TCGA-OR-A5JK-01A-11R-A29S-07 MEG3-DLK1 1 1 chr14:100845533:+ chr14:100728396:+ . NA TCGA-OR-A5JL-01A-11R-A29S-07 GTF2A1-POMT2 12 38 chr14:81220489:- chr14:77302943:- FRAMESHIFT NA TCGA-OR-A5JL-01A-11R-A29S-07 ANO2-GALNT8 7 12 chr12:5732517:- chr12:4850740:+ . NA TCGA-OR-A5JM-01A-11R-A29S-07 TAF6L-PCYT1A 12 21 chr11:62771490:+ chr3:196242640:- . NA TCGA-OR-A5JM-01A-11R-A29S-07 SCARB2-SGMS1 3 15 chr4:76213427:- chr10:50344345:- . NA TCGA-OR-A5JM-01A-11R-A29S-07 LIN7A-R3HDM2 3 1 chr12:80811465:- chr12:57310463:- . NA TCGA-OR-A5JM-01A-11R-A29S-07 KIF5A-DTX1 1 6 chr12:57567618:+ chr12:113077424:+ FRAMESHIFT NA TCGA-OR-A5JM-01A-11R-A29S-07 WBP1L-DLK1 1000 1000 chr10:102816267:+ chr14:100728421:+ . NA TCGA-OR-A5JO-01A-11R-A29S-07 TMLHE-VBP1 1 13 chrX:155524456:- chrX:155208874:+ . NA TCGA-OR-A5JP-01A-11R-A29S-07 LDLR-ZGLP1 421 7675 chr19:11089615:+ chr19:10308391:- FRAMESHIFT NA TCGA-OR-A5JP-01A-11R-A29S-07 PEG3-DENR 35 260 chr19:56836070:- chr12:122767588:+ . NA TCGA-OR-A5JP-01A-11R-A29S-07 ZIM2-DENR 35 260 chr19:56836070:- chr12:122767588:+ . NA TCGA-OR-A5JP-01A-11R-A29S-07 ARMC9-BLVRB 40 215 chr2:231198698:+ chr19:40451492:- . NA TCGA-OR-A5JP-01A-11R-A29S-07 SCAMP4-COX8A 10 287 chr19:1918990:+ chr11:63976225:+ FRAMESHIFT NA TCGA-OR-A5JP-01A-11R-A29S-07 MYLIP-OR5V1 7 74 chr6:16130747:+ chr6:29356277:- . NA TCGA-OR-A5JP-01A-11R-A29S-07 ZC3H4-ARHGAP35 7 46 chr19:47110895:- chr19:46987989:+ . NA TCGA-OR-A5JP-01A-11R-A29S-07 LAPTM4B-ARMC9 7 14 chr8:97776108:+ chr2:231355798:+ FRAMESHIFT NA TCGA-OR-A5JP-01A-11R-A29S-07 QSOX2-CTU2 4 25 chr9:136245476:- chr16:88714860:+ FRAMESHIFT NA TCGA-OR-A5JP-01A-11R-A29S-07 RECQL5-CACNA1G 1 6 chr17:75658298:- chr17:50590471:+ INFRAME NA TCGA-OR-A5JR-01A-11R-A29S-07 DLK1-MTCO1P12 1 53 chr14:100729066:+ chr1:631074:+ . NA TCGA-OR-A5JS-01A-11R-A29S-07 NSD1-EFNA5 26 92 chr5:177192019:+ chr5:107381376:- INFRAME Likely Oncogenic NA TCGA-OR-A5JS-01A-11R-A29S-07 GJC1-SKAP1 23 70 chr17:44807394:- chr17:48189500:- . NA TCGA-OR-A5JS-01A-11R-A29S-07 TLK2-CEP112 19 67 chr17:62608148:+ chr17:65689218:- INFRAME NA TCGA-OR-A5JS-01A-11R-A29S-07 CCNG1-SLCO6A1 2 17 chr5:163444481:+ chr5:102373494:- . NA TCGA-OR-A5JS-01A-11R-A29S-07 CCDC47-TERT 2 8 chr17:63773412:- chr5:1282624:- . NA TCGA-OR-A5JS-01A-11R-A29S-07 UIMC1-PJA2 3 4 chr5:176982469:- chr5:109383520:- . NA TCGA-OR-A5JS-01A-11R-A29S-07 INTS2-GLIS3 1 10 chr17:61911520:- chr9:3829492:- FRAMESHIFT NA TCGA-OR-A5JT-01A-11R-A29S-07 PHF20-SPAG4 9 36 chr20:35899648:+ chr20:35619195:+ INFRAME NA TCGA-OR-A5JT-01A-11R-A29S-07 C4B-DLK1 1 15 chr6:32032133:+ chr14:100734648:+ INFRAME NA TCGA-OR-A5JT-01A-11R-A29S-07 ZNF341-C20orf144 2 8 chr20:33745299:+ chr20:33663532:+ INFRAME NA TCGA-OR-A5JT-01A-11R-A29S-07 CYC1-DLK1 1000 1000 chr8:144096010:+ chr14:100734465:+ FRAMESHIFT NA TCGA-OR-A5JT-01A-11R-A29S-07 RPL10-DLK1 1000 1000 chrX:154400201:+ chr14:100728950:+ . NA TCGA-OR-A5JT-01A-11R-A29S-07 NKAIN4-IGF2 1000 1000 chr20:63240784:- chr11:2132154:- . NA TCGA-OR-A5JV-01A-11R-A29S-07 ADGRV1-CLPTM1L 52 246 chr5:90985522:+ chr5:1318453:- INFRAME NA TCGA-OR-A5JX-01A-11R-A29S-07 APC-REEP2 1 8 chr5:112801383:+ chr5:138445683:+ INFRAME Likely Oncogenic NA TCGA-OR-A5JY-01A-31R-A29S-07 GABRA5-NOV 34 244 chr15:26869334:+ chr8:119416386:+ . NA TCGA-OR-A5JY-01A-31R-A29S-07 CREB3L2-CPA2 30 97 chr7:138001604:- chr7:130282104:+ INFRAME NA TCGA-OR-A5JY-01A-31R-A29S-07 COMT-YPEL1 10 58 chr22:19964299:+ chr22:21710908:- . NA TCGA-OR-A5JY-01A-31R-A29S-07 HPS4-CABIN1 13 46 chr22:26479265:- chr22:24164400:+ INFRAME NA TCGA-OR-A5JY-01A-31R-A29S-07 ASCC3-TXNRD2 13 9 chr6:100604631:- chr22:19941897:- . NA TCGA-OR-A5JY-01A-31R-A29S-07 UBE2J1-CFAP206 4 29 chr6:89352539:- chr6:87464020:+ FRAMESHIFT NA TCGA-OR-A5JY-01A-31R-A29S-07 PAFAH1B2-RRP7BP 3 21 chr11:117144418:+ chr22:42580359:- . NA TCGA-OR-A5JY-01A-31R-A29S-07 MGA-NUSAP1 4 9 chr15:41699159:+ chr15:41349098:+ FRAMESHIFT Likely Oncogenic NA TCGA-OR-A5JY-01A-31R-A29S-07 FGD4-SLCO1A2 2 16 chr12:32399959:+ chr12:21334709:- . NA TCGA-OR-A5JY-01A-31R-A29S-07 VPS26B-C15orf41 2 14 chr11:134240155:+ chr15:36644278:+ INFRAME NA TCGA-OR-A5JY-01A-31R-A29S-07 UBR2-PXT1 1 17 chr6:42674193:+ chr6:36400584:- FRAMESHIFT NA TCGA-OR-A5JY-01A-31R-A29S-07 WWOX-CDH3 2 11 chr16:78164289:+ chr16:68722425:+ INFRAME NA TCGA-OR-A5JY-01A-31R-A29S-07 KCTD18-PLCL1 2 9 chr2:200497753:- chr2:198355295:+ . NA TCGA-OR-A5JY-01A-31R-A29S-07 PKIB-BLK 1 12 chr6:122633367:+ chr8:11561302:+ . NA TCGA-OR-A5JY-01A-31R-A29S-07 TBL1XR1-ATG7 2 4 chr3:177160871:- chr3:11554811:+ . NA TCGA-OR-A5JY-01A-31R-A29S-07 LIPH-EHHADH 1 4 chr3:185552423:- chr3:185193487:- INFRAME NA TCGA-OR-A5JY-01A-31R-A29S-07 MBD3-PALM 1 4 chr19:1582622:- chr19:726138:+ FRAMESHIFT NA TCGA-OR-A5JZ-01A-11R-A29S-07 C5orf56-SGF29 11 33 chr5:132419940:+ chr16:28581055:+ . NA TCGA-OR-A5JZ-01A-11R-A29S-07 MADD-POU2AF1 3 58 chr11:47326858:+ chr11:111358882:- . NA TCGA-OR-A5JZ-01A-11R-A29S-07 LRFN5-SNORA31 3 15 chr14:41608562:+ chr14:41594478:+ . NA TCGA-OR-A5JZ-01A-11R-A29S-07 SPEF2-C5orf42 2 6 chr5:35659207:+ chr5:37224740:- FRAMESHIFT NA TCGA-OR-A5K0-01A-11R-A29S-07 MBTPS1-SLC38A8 35 76 chr16:84116735:- chr16:84016727:- . NA TCGA-OR-A5K2-01A-11R-A29S-07 NFIC-SPATA33 12 42 chr19:3359685:+ chr16:89669286:+ FRAMESHIFT NA TCGA-OR-A5K2-01A-11R-A29S-07 MICAL3-TPTEP1 1 7 chr22:17816690:- chr22:16697496:+ . NA TCGA-OR-A5K2-01A-11R-A29S-07 TLCD2-LRP5 2 2 chr17:1709499:- chr11:68409914:+ INFRAME NA TCGA-OR-A5K4-01A-11R-A29S-07 PCMTD2-WASHC1 1000 1000 chr20:64287821:+ chr9:29739:- . NA TCGA-OR-A5K5-01A-11R-A29S-07 OAZ1-AMH 77 192 chr19:2269590:+ chr19:2250191:+ . NA TCGA-OR-A5K5-01A-11R-A29S-07 SIK3-CTNNBIP1 15 83 chr11:117098143:- chr1:9850776:- FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 LDLR-CCDC130 9 79 chr19:11089615:+ chr19:13732175:+ . NA TCGA-OR-A5K5-01A-11R-A29S-07 BRK1-FANCD2 9 70 chr3:10115819:+ chr3:10096326:+ FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 TXNDC11-CIB4 9 43 chr16:11736017:- chr2:26640567:- INFRAME NA TCGA-OR-A5K5-01A-11R-A29S-07 RAB8A-PLVAP 7 42 chr19:16112025:+ chr19:17366195:- FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 ZDHHC19-PCYT1A 4 50 chr3:196207398:- chr3:196214498:- . NA TCGA-OR-A5K5-01A-11R-A29S-07 TMEM87B-MERTK 4 23 chr2:112060037:+ chr2:112028351:+ FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 KCMF1-RAB1A 3 13 chr2:84971467:+ chr2:65098066:- FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 MSH5-BSCL2 4 9 chr6:31759177:+ chr11:62692797:- INFRAME NA TCGA-OR-A5K5-01A-11R-A29S-07 SENP2-MSH5 3 8 chr3:185599024:+ chr6:31758766:+ INFRAME NA TCGA-OR-A5K5-01A-11R-A29S-07 BTRC-MICU1 2 7 chr10:101354228:+ chr10:72566794:- . NA TCGA-OR-A5K5-01A-11R-A29S-07 RPRD1B-MEF2B 1 10 chr20:38066256:+ chr19:19157142:- . NA TCGA-OR-A5K5-01A-11R-A29S-07 TXNDC11-BAMBI 1 10 chr16:11742477:- chr10:28681258:+ FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 ARMC9-NPAS1 1 9 chr2:231198941:+ chr19:47021006:+ . NA TCGA-OR-A5K5-01A-11R-A29S-07 DPY30-MCU 1 9 chr2:31917926:- chr10:72834359:+ . NA TCGA-OR-A5K5-01A-11R-A29S-07 MEMO1-MCU 1 9 chr2:31917926:- chr10:72834359:+ INFRAME NA TCGA-OR-A5K5-01A-11R-A29S-07 MYO1F-LRSAM1 2 5 chr19:8577307:- chr9:127451929:+ . NA TCGA-OR-A5K5-01A-11R-A29S-07 ZC3H8-PARD3B 2 2 chr2:112230903:- chr2:205158722:+ FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 FRA10AC1-GCA 1 3 chr10:93684056:- chr2:162352338:+ FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 KCNMA1-SERTAD1 1 3 chr10:77637265:- chr19:40423546:- INFRAME NA TCGA-OR-A5K5-01A-11R-A29S-07 MINDY3-CRYGD 1 2 chr10:15843212:- chr2:208124354:- FRAMESHIFT NA TCGA-OR-A5K5-01A-11R-A29S-07 TMEM182-SCN3A 1 2 chr2:102764427:+ chr2:165164520:- FRAMESHIFT NA TCGA-OR-A5K6-01A-11R-A29S-07 ERN1-TEX2 26 236 chr17:64063986:- chr17:64160933:- INFRAME NA TCGA-OR-A5K9-01A-11R-A29S-07 ANKRD52-RASSF3 9 39 chr12:56243238:- chr12:64691470:+ INFRAME NA TCGA-OR-A5K9-01A-11R-A29S-07 OLFM2-PLEKHG4B 5 31 chr19:9936304:- chr5:113251:+ INFRAME NA TCGA-OR-A5K9-01A-11R-A29S-07 PALM-SGTA 1 21 chr19:719657:+ chr19:2769091:- . NA TCGA-OR-A5K9-01A-11R-A29S-07 MLLT1-PRLR 1 9 chr19:6270579:- chr5:35118122:- . NA TCGA-OR-A5K9-01A-11R-A29S-07 FAM19A2-IKZF4 1 6 chr12:62191259:- chr12:56025054:+ . NA TCGA-OR-A5K9-01A-11R-A29S-07 ANKRD52-DYRK2 1 3 chr12:56247493:- chr12:67657106:+ INFRAME NA TCGA-OR-A5K9-01A-11R-A29S-07 SUGP1-CASP14 1 1 chr19:19316422:- chr19:15052206:+ . NA TCGA-OR-A5KO-01A-11R-A29S-07 SYNJ2-COX4I1 4 4 chr6:158068728:+ chr16:85806827:+ FRAMESHIFT NA TCGA-OR-A5KO-01A-11R-A29S-07 NT5DC1-SLC35F1 1 7 chr6:116117945:+ chr6:118266995:+ FRAMESHIFT NA TCGA-OR-A5KO-01A-11R-A29S-07 FLYWCH1-TVP23A 1000 1000 chr16:2940092:+ chr16:10818768:- . NA TCGA-OR-A5KT-01A-11R-A29S-07 PYM1-SLC16A7 18 80 chr12:55903387:- chr12:59779423:+ FRAMESHIFT NA TCGA-OR-A5KT-01A-11R-A29S-07 SLC16A7-SARNP 15 28 chr12:59596236:+ chr12:55760640:- . NA TCGA-OR-A5KT-01A-11R-A29S-07 SPATS2-TSPAN8 1 6 chr12:49514613:+ chr12:71139848:- FRAMESHIFT NA TCGA-OR-A5KV-01A-11R-A29S-07 KDM6A-FUNDC1 47 405 chrX:44974715:+ chrX:44542101:- FRAMESHIFT Likely Oncogenic NA TCGA-OR-A5KV-01A-11R-A29S-07 JADE3-SSX2 38 214 chrX:47058345:+ chrX:52700578:- INFRAME NA TCGA-OR-A5KV-01A-11R-A29S-07 REPS2-APOO 3 6 chrX:16947134:+ chrX:23880952:- INFRAME NA TCGA-OR-A5KV-01A-11R-A29S-07 GNL3L-PAGE5 1 4 chrX:54532585:+ chrX:55221375:+ INFRAME NA TCGA-OR-A5KW-01A-11R-A29S-07 BRMS1L-ZNF839 2 17 chr14:35834923:+ chr14:102338816:+ INFRAME NA TCGA-OR-A5KW-01A-11R-A29S-07 ARFGAP2-PACSIN3 1 2 chr11:47171426:- chr11:47178487:- INFRAME NA TCGA-OR-A5KX-01A-11R-A29S-07 ARHGAP23-RPL23 6 24 chr17:38482678:+ chr17:38853105:- FRAMESHIFT NA TCGA-OR-A5KX-01A-11R-A29S-07 FN3KRP-KCNQ1 3 34 chr17:82726602:+ chr11:2847767:+ INFRAME NA TCGA-OR-A5KX-01A-11R-A29S-07 PPP1R16A-SLC52A2 4 26 chr8:144490212:+ chr8:144360115:+ . NA TCGA-OR-A5KX-01A-11R-A29S-07 PPP3R1-WDR92 5 9 chr2:68252125:- chr2:68144715:- FRAMESHIFT NA TCGA-OR-A5KX-01A-11R-A29S-07 FKBP8-HAUS8 4 9 chr19:18541679:- chr19:17073335:- FRAMESHIFT NA TCGA-OR-A5KX-01A-11R-A29S-07 GIPC1-CYP4F22 1 12 chr19:14491656:- chr19:15548108:+ . NA TCGA-OR-A5KX-01A-11R-A29S-07 ZNF626-ADGRE5 1 12 chr19:20661444:- chr19:14388450:+ FRAMESHIFT NA TCGA-OR-A5KX-01A-11R-A29S-07 CDH12-BNIP3L 1 11 chr5:22505270:- chr8:26505307:+ . NA TCGA-OR-A5KX-01A-11R-A29S-07 PRLR-CDH12 1 10 chr5:35118061:- chr5:22505364:- . NA TCGA-OR-A5KX-01A-11R-A29S-07 CDK12-LRRC37A11P 1 9 chr17:39463117:+ chr17:39034170:+ . Likely Oncogenic NA TCGA-OR-A5KX-01A-11R-A29S-07 ASF1B-GIPC1 1 5 chr19:14136348:- chr19:14491743:- . NA TCGA-OR-A5KX-01A-11R-A29S-07 DNAJC21-SGCZ 1 5 chr5:34929916:+ chr8:14324204:- FRAMESHIFT NA TCGA-OR-A5KY-01A-11R-A29S-07 CHD3-RAD51C 17 88 chr17:7893935:+ chr17:58709859:+ INFRAME Likely Oncogenic NA TCGA-OR-A5KY-01A-11R-A29S-07 PPP1R37-BCAM 14 54 chr19:45093527:+ chr19:44811225:+ INFRAME NA TCGA-OR-A5KY-01A-11R-A29S-07 B4GALT5-ASIP 12 32 chr20:49713576:- chr20:34260365:+ . NA TCGA-OR-A5KY-01A-11R-A29S-07 TSPAN18-PIK3R2 8 37 chr11:44727287:+ chr19:18166160:+ . NA TCGA-OR-A5KY-01A-11R-A29S-07 ASB3-MTA3 4 15 chr2:53786821:- chr2:42640173:+ . NA TCGA-OR-A5KY-01A-11R-A29S-07 FHOD3-ESRRB 2 22 chr18:36372744:+ chr14:76482016:+ INFRAME NA TCGA-OR-A5KY-01A-11R-A29S-07 ALDH3A2-EIF5A 2 21 chr17:19671956:+ chr17:7309615:+ INFRAME NA TCGA-OR-A5KY-01A-11R-A29S-07 AMBRA1-LRP4 1 21 chr11:46493608:- chr11:46876830:- INFRAME NA TCGA-OR-A5KY-01A-11R-A29S-07 AHSA2-C2orf74 3 10 chr2:61186497:+ chr2:61162842:+ FRAMESHIFT NA TCGA-OR-A5KY-01A-11R-A29S-07 TMEM248-ATOH8 2 12 chr7:66942024:+ chr2:85763991:+ INFRAME NA TCGA-OR-A5KY-01A-11R-A29S-07 ALDH2-ACTB 1 10 chr12:111798242:+ chr7:5529663:- INFRAME NA TCGA-OR-A5KY-01A-11R-A29S-07 CTDNEP1-SHBG 1 2 chr17:7246026:- chr17:7630416:+ FRAMESHIFT NA TCGA-OR-A5KZ-01A-11R-A29S-07 VPS41-CEP41 3 23 chr7:38754702:- chr7:130428018:- INFRAME NA TCGA-OR-A5KZ-01A-11R-A29S-07 UBR2-NDUFS2 1 1 chr6:42642481:+ chr1:161214156:+ FRAMESHIFT NA TCGA-OR-A5L6-01A-11R-A29S-07 PLBD2-CIDEC 25 95 chr12:113358890:+ chr3:9878511:- INFRAME NA TCGA-OR-A5L6-01A-11R-A29S-07 CLK1-NAPRT 11 82 chr2:200854616:- chr8:143577943:- FRAMESHIFT NA TCGA-OR-A5LB-01A-11R-A29S-07 FAM19A4-TMF1 14 63 chr3:68880730:- chr3:69048562:- INFRAME NA TCGA-OR-A5LB-01A-11R-A29S-07 LMBR1-CHMP1A 2 1 chr7:156724112:- chr16:89647331:- FRAMESHIFT NA TCGA-OR-A5LD-01A-11R-A29S-07 ZXDC-UROC1 3 10 chr3:126466155:- chr3:126482485:- FRAMESHIFT NA TCGA-OR-A5LD-01A-11R-A29S-07 AUTS2-CDH8 1 5 chr7:70698620:+ chr16:61901473:- FRAMESHIFT NA TCGA-OR-A5LD-01A-11R-A29S-07 KIF18B-C1QL1 1 3 chr17:44947628:- chr17:44960367:- . NA TCGA-OR-A5LE-01A-11R-A29S-07 CCDC117-TNNI2 31 76 chr22:28773025:+ chr11:1841272:+ . NA TCGA-OR-A5LG-01A-11R-A29S-07 MAP3K9-MED6 3 33 chr14:70749933:- chr14:70593378:- INFRAME NA TCGA-OR-A5LG-01A-11R-A29S-07 MED6-MAP3K9 2 22 chr14:70596611:- chr14:70761182:- INFRAME NA TCGA-OR-A5LJ-01A-11R-A29S-07 TNS1-CATIP-AS2 4 53 chr2:217835091:- chr2:218327959:- . NA TCGA-OR-A5LL-01A-11R-A29S-07 NOTCH2NL-FCGR3B 5 48 chr1:146228709:- chr1:161630388:- . NA TCGA-OR-A5LL-01A-11R-A29S-07 MMACHC-TTC23L 1 9 chr1:45500413:+ chr5:34896770:+ INFRAME NA TCGA-OR-A5LL-01A-11R-A29S-07 ZNF616-TRAPPC8 1 4 chr19:52130501:- chr18:31931523:- FRAMESHIFT NA TCGA-OR-A5LM-01A-11R-A29S-07 CMTR1-SMIM13 3 24 chr6:37473601:+ chr6:11134403:+ FRAMESHIFT NA TCGA-OR-A5LO-01A-11R-A29S-07 CELF1-FNBP4 18 123 chr11:47483453:- chr11:47720086:- INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 QRICH1-ACOT2 5 146 chr3:49076709:- chr14:73574908:+ INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 FCN2-COL5A1 12 42 chr9:134886564:+ chr9:134822998:+ FRAMESHIFT NA TCGA-OR-A5LO-01A-11R-A29S-07 VPS26A-KIF1BP 12 37 chr10:69133047:+ chr10:69041564:+ INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 MINOS1-GSE1 11 28 chr1:19597109:+ chr16:85665976:+ INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 RAB40C-PRR35 2 61 chr16:618260:+ chr16:563256:+ . NA TCGA-OR-A5LO-01A-11R-A29S-07 PGPEP1-ALPL 7 40 chr19:18342911:+ chr1:21553978:+ . NA TCGA-OR-A5LO-01A-11R-A29S-07 RASSF3-DAZAP2 4 21 chr12:64610743:+ chr12:51240343:+ FRAMESHIFT NA TCGA-OR-A5LO-01A-11R-A29S-07 FOXO3-LACE1 3 11 chr6:108561829:+ chr6:108519697:+ INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 GBF1-NOLC1 3 8 chr10:102370860:+ chr10:102159193:+ INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 WRAP53-AHCY 2 11 chr17:7689701:+ chr20:34281165:- INFRAME NA TCGA-OR-A5LO-01A-11R-A29S-07 CMIP-BCO1 2 7 chr16:81445541:+ chr16:81262136:+ FRAMESHIFT NA TCGA-OR-A5LO-01A-11R-A29S-07 AP1B1-RFPL1S 2 5 chr22:29342285:- chr22:29442129:- . NA TCGA-OR-A5LO-01A-11R-A29S-07 FOXK2-TNFSF13 1 9 chr17:82520307:+ chr17:7559846:+ FRAMESHIFT NA TCGA-OR-A5LO-01A-11R-A29S-07 CAPZB-MUC22 2 4 chr1:19485436:- chr6:31025502:+ FRAMESHIFT NA TCGA-OR-A5LO-01A-11R-A29S-07 REPS2-TXLNG 2 4 chrX:17006344:+ chrX:16818574:+ FRAMESHIFT NA TCGA-OR-A5LR-01A-11R-A29S-07 TYW1B-STX5 1 5 chr7:72826855:- chr11:62807628:- FRAMESHIFT NA TCGA-OR-A5LS-01A-11R-A29S-07 IL6R-TDRD10 2 20 chr1:154435156:+ chr1:154547409:+ FRAMESHIFT NA TCGA-OU-A5PI-01A-12R-A29S-07 HNRNPA2B1-HSD17B10 5 10 chr7:26200572:- chrX:53433886:- INFRAME NA TCGA-OU-A5PI-01A-12R-A29S-07 ST3GAL2-VAC14 5 6 chr16:70438949:- chr16:70772172:- . NA TCGA-OU-A5PI-01A-12R-A29S-07 PLCB1-WTIP 2 6 chr20:8757178:+ chr19:34490376:+ INFRAME NA TCGA-OU-A5PI-01A-12R-A29S-07 CC2D2A-BST1 2 1 chr4:15480827:+ chr4:15711807:+ INFRAME NA TCGA-PA-A5YG-01A-11R-A29S-07 KCNQ1-DUSP8 11 73 chr11:2778037:+ chr11:1565934:- . NA TCGA-PK-A5H9-01A-11R-A29S-07 ARAP1-IGF2 1000 1000 chr11:72722065:- chr11:2132106:- . NA TCGA-PK-A5H9-01A-11R-A29S-07 CLUH-IGF2 1000 1000 chr17:2689386:- chr11:2139208:- . NA TCGA-PK-A5H9-01A-11R-A29S-07 GALNT2-IGF2 1000 1000 chr1:230255303:+ chr11:2131760:- . NA TCGA-PK-A5HA-01A-11R-A29S-07 RCC1L-DENND1A 9 64 chr7:75052711:- chr9:123403490:- INFRAME NA TCGA-PK-A5HA-01A-11R-A29S-07 MCCC1-LAMP3 4 5 chr3:183086693:- chr3:183154391:- FRAMESHIFT NA TCGA-PK-A5HA-01A-11R-A29S-07 PPIP5K1-FRMD5 3 7 chr15:43534974:- chr15:43888872:- FRAMESHIFT NA TCGA-PK-A5HA-01A-11R-A29S-07 PXK-RPP14 1 13 chr3:58333090:+ chr3:58310507:+ FRAMESHIFT NA TCGA-PK-A5HA-01A-11R-A29S-07 NUP85-TMEM94 1 12 chr17:75205794:+ chr17:75471800:+ . NA TCGA-PK-A5HA-01A-11R-A29S-07 SEMA6C-VPS72 1 4 chr1:151139976:- chr1:151185950:- FRAMESHIFT NA TCGA-PK-A5HB-01A-11R-A29S-07 RUSC2-U82695.5 33 45 chr9:35490172:+ chrX:153398920:- . NA TCGA-PK-A5HB-01A-11R-A29S-07 RRP7A-PACSIN2 8 133 chr22:42518005:- chr22:42879169:- INFRAME NA TCGA-PK-A5HB-01A-11R-A29S-07 TSGA10-ZRANB3 1 5 chr2:99154837:- chr2:135224517:- . NA TCGA-2F-A9KO-01A-11R-A38B-07 TOGARAM1-KCNK13 7 7 chr14:45054549:+ chr14:90184111:+ FRAMESHIFT NA TCGA-2F-A9KO-01A-11R-A38B-07 SHPK-GUCY1A2 1 9 chr17:3630205:- chr11:106986131:- FRAMESHIFT NA TCGA-2F-A9KO-01A-11R-A38B-07 NUDT2-UBAP1 1 4 chr9:34339166:+ chr9:34249779:+ FRAMESHIFT NA TCGA-2F-A9KP-01A-11R-A38B-07 EPB41-HGSNAT 51 152 chr1:28997319:+ chr8:43158575:+ INFRAME NA TCGA-2F-A9KP-01A-11R-A38B-07 SYS1-IDO2 21 109 chr20:45365686:+ chr8:40015247:+ FRAMESHIFT NA TCGA-2F-A9KP-01A-11R-A38B-07 NUP188-TMEM8C 8 88 chr9:129006368:+ chr9:133514785:- INFRAME NA TCGA-2F-A9KP-01A-11R-A38B-07 PHF21A-NUTF2 21 31 chr11:46076754:- chr16:67868340:+ INFRAME NA TCGA-2F-A9KP-01A-11R-A38B-07 IP6K1-MON1A 17 42 chr3:49738212:- chr3:49913359:- INFRAME NA TCGA-2F-A9KP-01A-11R-A38B-07 ST3GAL3-ZMAT4 11 35 chr1:43736380:+ chr8:40532238:- FRAMESHIFT NA TCGA-2F-A9KP-01A-11R-A38B-07 TRMT61A-AMN 5 14 chr14:103530309:+ chr14:102928426:+ FRAMESHIFT NA TCGA-2F-A9KP-01A-11R-A38B-07 GBF1-UBE2R2 4 16 chr10:102344182:+ chr9:33886881:+ FRAMESHIFT NA TCGA-2F-A9KP-01A-11R-A38B-07 SEMA5A-MYHAS 2 20 chr5:9437756:- chr17:10608354:+ . NA TCGA-2F-A9KP-01A-11R-A38B-07 RAF1-IQSEC1 2 15 chr3:12663813:- chr3:12941865:- . Likely Oncogenic NA TCGA-2F-A9KP-01A-11R-A38B-07 WDR59-CHST5 4 5 chr16:74888169:- chr16:75533183:- . NA TCGA-2F-A9KP-01A-11R-A38B-07 ABHD17C-PRAMEF6 2 5 chr15:80696019:+ chr1:12942540:- . NA TCGA-2F-A9KR-01A-11R-A38B-07 ZNF326-CCDC18 17 75 chr1:89995273:+ chr1:93226333:+ FRAMESHIFT NA TCGA-2F-A9KR-01A-11R-A38B-07 MSI2-BCAS3 4 14 chr17:57652161:+ chr17:60808004:+ INFRAME NA TCGA-2F-A9KR-01A-11R-A38B-07 OGT-GCNA 1000 1000 chrX:71554591:+ chrX:71592121:+ . NA TCGA-2F-A9KT-01A-11R-A38B-07 GSTP1-ELP4 12 18 chr11:67586537:+ chr11:31650115:+ FRAMESHIFT NA TCGA-2F-A9KT-01A-11R-A38B-07 CDC42BPG-EHD1 5 7 chr11:64844410:- chr11:64860336:- INFRAME NA TCGA-2F-A9KT-01A-11R-A38B-07 DHX35-MYO7A 4 4 chr20:39001842:+ chr11:77197481:+ FRAMESHIFT NA TCGA-2F-A9KT-01A-11R-A38B-07 CACNA1I-SYNGR1 2 7 chr22:39673082:+ chr22:39381696:+ FRAMESHIFT NA TCGA-2F-A9KT-01A-11R-A38B-07 NPRL3-UBE2L3 2 5 chr16:86668:- chr22:21621515:+ . NA TCGA-2F-A9KW-01A-11R-A38B-07 LIMCH1-UCHL1 30 380 chr4:41360936:+ chr4:41264103:+ FRAMESHIFT NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A6 26 53 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A1 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A10 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A3 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A4 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A5 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A7 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A8 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 CDS1-UGT1A9 26 48 chr4:84609525:+ chr2:233767034:+ INFRAME NA TCGA-2F-A9KW-01A-11R-A38B-07 VGLL4-TMEM40 7 15 chr3:11601833:- chr3:12749840:- . NA TCGA-2F-A9KW-01A-11R-A38B-07 KIF13B-PPP2R5B 1 9 chr8:29118868:- chr11:64925471:+ . NA TCGA-2F-A9KW-01A-11R-A38B-07 IPPK-CDC42SE1 2 4 chr9:92634386:- chr1:151059773:- . NA TCGA-2F-A9KW-01A-11R-A38B-07 PTPN11-ZNF706 1 4 chr12:112419125:+ chr8:101201743:- . NA TCGA-4Z-AA7M-01A-11R-A39I-07 NUP62-VSTM2B 95 385 chr19:49927694:- chr19:29563846:+ . NA TCGA-4Z-AA7M-01A-11R-A39I-07 IL4I1-VSTM2B 95 375 chr19:49927694:- chr19:29563846:+ . NA TCGA-4Z-AA7M-01A-11R-A39I-07 SLC39A11-ADSS 8 42 chr17:73084808:- chr1:244437768:- INFRAME NA TCGA-4Z-AA7M-01A-11R-A39I-07 TRIM37-ZNF385D 8 12 chr17:59062567:- chr3:22169035:- . NA TCGA-4Z-AA7M-01A-11R-A39I-07 USP31-PRKCB 4 12 chr16:23148638:- chr16:23988508:+ FRAMESHIFT NA TCGA-4Z-AA7M-01A-11R-A39I-07 PIGS-SPAG5 3 11 chr17:28556166:- chr17:28578292:- FRAMESHIFT NA TCGA-4Z-AA7M-01A-11R-A39I-07 ILF3-MAPK13 1 13 chr19:10654487:+ chr6:36131271:+ . NA TCGA-4Z-AA7M-01A-11R-A39I-07 NUDT19-DPY19L3 1 12 chr19:32709392:+ chr19:32432716:+ FRAMESHIFT NA TCGA-4Z-AA7M-01A-11R-A39I-07 ZNF507-TDRD12 1 8 chr19:32345783:+ chr19:32797735:+ . NA TCGA-4Z-AA7M-01A-11R-A39I-07 MELK-CNTFR 1 4 chr9:36573007:+ chr9:34581205:- . NA TCGA-4Z-AA7O-01A-31R-A39I-07 PPFIA1-SHANK2 4 3 chr11:70272436:+ chr11:70698763:- FRAMESHIFT NA TCGA-4Z-AA7O-01A-31R-A39I-07 RBM4B-FCHSD2 1 6 chr11:66676668:- chr11:73015885:- FRAMESHIFT NA TCGA-4Z-AA7Q-01A-11R-A39I-07 FOXJ3-SVBP 32 137 chr1:42227883:- chr1:42807500:- INFRAME NA TCGA-4Z-AA7Q-01A-11R-A39I-07 MLF1-RSRC1 5 11 chr3:158592581:+ chr3:158543335:+ INFRAME NA TCGA-4Z-AA7Q-01A-11R-A39I-07 SAMD8-ADK 4 15 chr10:75111722:+ chr10:74708321:+ FRAMESHIFT NA TCGA-4Z-AA7Q-01A-11R-A39I-07 ACOX3-CD96 1 5 chr4:8374978:- chr3:111665527:+ . NA TCGA-4Z-AA7Q-01A-11R-A39I-07 CHMP4C-ITGB1 2 0 chr8:81732816:+ chr10:32901635:- FRAMESHIFT NA TCGA-4Z-AA7Q-01A-11R-A39I-07 LPAR6-TPP2 1 2 chr13:48412421:- chr13:102604793:+ INFRAME NA TCGA-4Z-AA7Q-01A-11R-A39I-07 UBE2G1-PELP1 1 2 chr17:4282798:- chr17:4691442:- . NA TCGA-4Z-AA7Q-01A-11R-A39I-07 ABCA1-RAB5C 1 1 chr9:104883039:- chr17:42126848:- FRAMESHIFT NA TCGA-4Z-AA7R-01A-11R-A39I-07 ADAM10-TERB2 13 46 chr15:58717577:- chr15:44973867:+ INFRAME NA TCGA-4Z-AA7R-01A-11R-A39I-07 SWT1-DCAF8 8 34 chr1:185190642:+ chr1:160225663:- INFRAME NA TCGA-4Z-AA7R-01A-11R-A39I-07 DCDC2-MRS2 3 10 chr6:24353569:- chr6:24422937:+ INFRAME NA TCGA-4Z-AA7R-01A-11R-A39I-07 MCM3-ADGRF1 4 3 chr6:52282045:- chr6:47024217:- FRAMESHIFT NA TCGA-4Z-AA7R-01A-11R-A39I-07 CDKAL1-OFCC1 3 6 chr6:20548705:+ chr6:9850469:- . NA TCGA-4Z-AA7R-01A-11R-A39I-07 SLC9A8-TOM1L2 1 4 chr20:49815189:+ chr17:17850952:- FRAMESHIFT NA TCGA-4Z-AA7S-01A-11R-A39I-07 RAB3IP-CD63 425 1388 chr12:69739031:+ chr12:55726261:- . NA TCGA-4Z-AA7S-01A-11R-A39I-07 CD63-OS9 205 908 chr12:55725813:- chr12:57715760:+ INFRAME NA TCGA-4Z-AA7S-01A-11R-A39I-07 PABPC1-VPS13B 138 334 chr8:100704297:- chr8:99766774:+ . NA TCGA-4Z-AA7S-01A-11R-A39I-07 PGAP3-MYOCD 20 181 chr17:39684597:- chr17:12736161:+ FRAMESHIFT NA TCGA-4Z-AA7S-01A-11R-A39I-07 DCAF12-EXOSC2 11 43 chr9:34088000:- chr9:130699329:+ . NA TCGA-4Z-AA7S-01A-11R-A39I-07 RAB3IP-OS9 10 38 chr12:69739031:+ chr12:57715760:+ . NA TCGA-4Z-AA7S-01A-11R-A39I-07 SLFN11-MIEN1 8 18 chr17:35373474:- chr17:39729423:- . NA TCGA-4Z-AA7S-01A-11R-A39I-07 KB-1562D12.1-RGS22 4 6 chr8:101492450:- chr8:99965430:- . NA TCGA-4Z-AA7S-01A-11R-A39I-07 STARD3-SMCR5 5 1 chr17:39637231:+ chr17:17777459:- . NA TCGA-4Z-AA7S-01A-11R-A39I-07 AZIN1-NCALD 2 4 chr8:102863807:- chr8:102020289:- . NA TCGA-4Z-AA7S-01A-11R-A39I-07 PGAP3-LRRC6 2 4 chr17:39684597:- chr8:132610261:- INFRAME NA TCGA-4Z-AA7S-01A-11R-A39I-07 ERBB2-CTTN 1 6 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-4Z-AA7S-01A-11R-A39I-07 CRLF3-AATF 1 5 chr17:30784307:- chr17:36950214:+ FRAMESHIFT NA TCGA-4Z-AA7W-01A-11R-A39I-07 SCN8A-KCNC2 1 5 chr12:51689096:+ chr12:75051317:- FRAMESHIFT NA TCGA-4Z-AA80-01A-11R-A39I-07 SEC14L4-SIAH1 9 44 chr22:30503677:- chr16:48403667:- . NA TCGA-4Z-AA80-01A-11R-A39I-07 KIF13A-KDM1B 7 26 chr6:17987054:- chr6:18166267:+ INFRAME NA TCGA-4Z-AA80-01A-11R-A39I-07 PPFIA1-DYNC2H1 6 22 chr11:70272436:+ chr11:103113537:+ INFRAME NA TCGA-4Z-AA80-01A-11R-A39I-07 TRPM7-EHD4 1 21 chr15:50596255:- chr15:41901181:- FRAMESHIFT NA TCGA-4Z-AA80-01A-11R-A39I-07 ELF1-VWA8 2 9 chr13:40981983:- chr13:41891587:- INFRAME NA TCGA-4Z-AA80-01A-11R-A39I-07 LRCH1-PHF11 2 4 chr13:46728984:+ chr13:49513059:+ INFRAME NA TCGA-4Z-AA80-01A-11R-A39I-07 BTBD9-NBAT1 1 5 chr6:38192519:- chr6:22136669:- . NA TCGA-4Z-AA80-01A-11R-A39I-07 PSMD11-SLC4A4 1 4 chr17:32454619:+ chr4:71339370:+ FRAMESHIFT NA TCGA-4Z-AA82-01A-11R-A39I-07 CREBBP-NLRC3 5 14 chr16:3744894:- chr16:3542274:- FRAMESHIFT Likely Oncogenic NA TCGA-4Z-AA82-01A-11R-A39I-07 RANBP17-TLX3 4 3 chr5:170862051:+ chr5:171310150:+ INFRAME NA TCGA-4Z-AA82-01A-11R-A39I-07 ANKLE2-ZNF605 1 6 chr12:132741419:- chr12:132948270:- . NA TCGA-4Z-AA82-01A-11R-A39I-07 MOB1B-RUFY3 1 5 chr4:70902550:+ chr4:70806516:+ FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 EP300-HAUS8 8 44 chr22:41117821:+ chr19:17056002:- INFRAME Likely Oncogenic NA TCGA-4Z-AA84-01A-11R-A39I-07 FAF1-ITGB3BP 6 37 chr1:50801631:- chr1:63508570:- INFRAME NA TCGA-4Z-AA84-01A-11R-A39I-07 CEP170-UBE2Q1 6 19 chr1:243255040:- chr1:154555964:- . NA TCGA-4Z-AA84-01A-11R-A39I-07 IQCK-BCAR4 6 16 chr16:19733828:+ chr16:11820465:- . NA TCGA-4Z-AA84-01A-11R-A39I-07 ROCK1-FABP2 7 10 chr18:21110818:- chr4:119320842:- FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 ZW10-UPK2 6 9 chr11:113768833:- chr11:118957598:+ FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 ARHGAP1-AMBRA1 5 8 chr11:46695660:- chr11:46418052:- FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 MVP-SEZ6L2 6 4 chr16:29820510:+ chr16:29888725:- . NA TCGA-4Z-AA84-01A-11R-A39I-07 SRP68-XIRP2 2 17 chr17:76057403:- chr2:167210735:+ FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 PFKP-CAMK2G 4 6 chr10:3116846:+ chr10:73860889:- FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 FAM91A1-ANXA13 1 12 chr8:123775298:+ chr8:123712753:- INFRAME NA TCGA-4Z-AA84-01A-11R-A39I-07 ZNF700-TOX 2 7 chr19:11925273:+ chr8:58939544:- INFRAME NA TCGA-4Z-AA84-01A-11R-A39I-07 GANC-RORA 2 5 chr15:42326424:+ chr15:60497619:- FRAMESHIFT NA TCGA-4Z-AA84-01A-11R-A39I-07 AP4B1-PIFO 1 6 chr1:113901755:- chr1:111346910:+ INFRAME NA TCGA-4Z-AA84-01A-11R-A39I-07 CTNNA1-LARP1 1 6 chr5:138753510:+ chr5:154811247:+ . NA TCGA-4Z-AA84-01A-11R-A39I-07 GLCCI1-ICA1 1 6 chr7:8071131:+ chr7:8143972:- FRAMESHIFT NA TCGA-4Z-AA86-01A-11R-A39I-07 RANBP3-ANKRD24 5 8 chr19:5978061:- chr19:4199875:+ FRAMESHIFT NA TCGA-4Z-AA87-01A-11R-A39I-07 ADGRG1-GINS3 18 73 chr16:57619881:+ chr16:58386621:+ . NA TCGA-4Z-AA87-01A-11R-A39I-07 LUC7L-SLC27A5 7 28 chr16:220649:- chr19:58501410:- FRAMESHIFT NA TCGA-4Z-AA87-01A-11R-A39I-07 RAB3GAP2-BPNT1 6 15 chr1:220205907:- chr1:220079854:- . NA TCGA-4Z-AA87-01A-11R-A39I-07 ELOC-STAU2 1 32 chr8:73959765:- chr8:73617451:- FRAMESHIFT NA TCGA-4Z-AA87-01A-11R-A39I-07 MEGF9-PSMD5 5 9 chr9:120713758:- chr9:120820979:- FRAMESHIFT NA TCGA-4Z-AA87-01A-11R-A39I-07 C21orf59-BACE2 2 17 chr21:32603161:- chr21:41226266:+ INFRAME NA TCGA-4Z-AA87-01A-11R-A39I-07 GNB1-CDK11A 5 5 chr1:1890820:- chr1:1705025:- . NA TCGA-4Z-AA87-01A-11R-A39I-07 MSI2-YPEL2 3 5 chr17:57262192:+ chr17:59353215:+ . NA TCGA-4Z-AA87-01A-11R-A39I-07 MAN1C1-TMEM57 1 3 chr1:25753578:+ chr1:25498264:+ FRAMESHIFT NA TCGA-5N-A9KI-01A-31R-A42T-07 PTP4A2-ARFGEF2 1 13 chr1:31937987:- chr20:49028530:+ . NA TCGA-5N-A9KM-01A-11R-A42T-07 MYO1E-FOXB1 16 18 chr15:59372498:- chr15:60025756:+ . NA TCGA-5N-A9KM-01A-11R-A42T-07 DPP8-PARP16 4 13 chr15:65474209:- chr15:65248228:- INFRAME NA TCGA-BL-A13J-01A-11R-A10U-07 ACKR2-POMGNT2 5 35 chr3:42809532:+ chr3:43081536:- . NA TCGA-BL-A13J-01A-11R-A10U-07 KRBOX1-POMGNT2 5 28 chr3:42809532:+ chr3:43081536:- . NA TCGA-BL-A13J-01A-11R-A10U-07 DENND4C-ACER2 10 0 chr9:19230833:+ chr9:19446281:+ . NA TCGA-BL-A13J-01A-11R-A10U-07 MGST3-UCK2 1 9 chr1:165631293:+ chr1:165890204:+ . NA TCGA-BL-A3JM-01A-12R-A21D-07 UBL3-CKAP2 51 103 chr13:29849512:- chr13:52456523:+ FRAMESHIFT NA TCGA-BL-A3JM-01A-12R-A21D-07 SMARCC1-DOCK3 7 12 chr3:47772817:- chr3:50890026:+ INFRAME NA TCGA-BT-A0S7-01A-11R-A10U-07 RAB3IP-NUP107 91 536 chr12:69756663:+ chr12:68731607:+ FRAMESHIFT NA TCGA-BT-A0S7-01A-11R-A10U-07 EP300-MCHR1 14 81 chr22:41093098:+ chr22:40680949:+ INFRAME Likely Oncogenic NA TCGA-BT-A0S7-01A-11R-A10U-07 AMOTL1-SLCO2B1 2 12 chr11:94795160:+ chr11:75162655:+ INFRAME NA TCGA-BT-A0YX-01A-11R-A10U-07 C5orf66-JUP 53 205 chr5:135174172:+ chr17:41758870:- . NA TCGA-BT-A0YX-01A-11R-A10U-07 PCBD2-C5orf66 13 36 chr5:134905223:+ chr5:135174042:+ . NA TCGA-BT-A0YX-01A-11R-A10U-07 ACAP2-XXYLT1 1 5 chr3:195333028:- chr3:195156581:- FRAMESHIFT NA TCGA-BT-A20J-01A-11R-A14Y-07 ACAP2-XXYLT1 5 9 chr3:195342471:- chr3:195226856:- INFRAME NA TCGA-BT-A20J-01A-11R-A14Y-07 TBC1D4-TRAPPC12 3 17 chr13:75309942:- chr2:3443779:+ INFRAME NA TCGA-BT-A20J-01A-11R-A14Y-07 C3-EXO5 3 11 chr19:6677906:- chr1:40514515:+ . NA TCGA-BT-A20J-01A-11R-A14Y-07 KBTBD2-COBL 5 2 chr7:32891536:- chr7:51219944:- . NA TCGA-BT-A20J-01A-11R-A14Y-07 COBL-FKBP9 1 5 chr7:51190850:- chr7:33002676:+ INFRAME NA TCGA-BT-A20N-01A-11R-A14Y-07 CTNNB1-SEM1 5 58 chr3:41239354:+ chr7:96645932:- . NA TCGA-BT-A20N-01A-11R-A14Y-07 PPP6R3-YAP1 6 45 chr11:68558679:+ chr11:102227469:+ INFRAME Likely Oncogenic NA TCGA-BT-A20N-01A-11R-A14Y-07 ZNF652-MRPL1 2 15 chr17:49311312:- chr4:77906946:+ . NA TCGA-BT-A20N-01A-11R-A14Y-07 FBXL4-BTN3A3 4 6 chr6:98926477:- chr6:26443957:+ FRAMESHIFT NA TCGA-BT-A20P-01A-11R-A14Y-07 CPEB4-HMP19 1 18 chr5:173890858:+ chr5:174242682:+ . NA TCGA-BT-A20Q-01A-11R-A14Y-07 EPN2-KCNJ18 7 58 chr17:19237531:+ chr17:21695983:+ . NA TCGA-BT-A20Q-01A-11R-A14Y-07 KDM6A-ANOS1 3 6 chrX:45085979:+ chrX:8623670:- FRAMESHIFT Likely Oncogenic NA TCGA-BT-A20Q-01A-11R-A14Y-07 EPN2-KCNJ12 1000 1000 chr17:19237531:+ chr17:21408519:+ . NA TCGA-BT-A20R-01A-12R-A16R-07 GNA12-CARD11 10 17 chr7:2794928:- chr7:2934629:- INFRAME NA TCGA-BT-A20R-01A-12R-A16R-07 NEDD4L-HYI 2 10 chr18:58252054:+ chr1:43452319:- FRAMESHIFT NA TCGA-BT-A20R-01A-12R-A16R-07 GUCY1A3-SIK3 2 1 chr4:155667419:+ chr11:116957064:- . NA TCGA-BT-A20T-01A-11R-A14Y-07 GATAD2B-ERI3 2 6 chr1:153922733:- chr1:44319744:- . NA TCGA-BT-A20T-01A-11R-A14Y-07 NSD1-FAT2 1 2 chr5:177248324:+ chr5:151512606:- INFRAME Likely Oncogenic NA TCGA-BT-A20U-01A-11R-A14Y-07 ATP6V0A1-STAT5A 13 38 chr17:42458963:+ chr17:42288056:+ . NA TCGA-BT-A20V-01A-11R-A14Y-07 VAC14-WWOX 14 44 chr16:70731495:- chr16:79211608:+ INFRAME NA TCGA-BT-A20V-01A-11R-A14Y-07 UBE4B-ZNF536 6 17 chr1:10105744:+ chr19:30710757:+ FRAMESHIFT NA TCGA-BT-A20V-01A-11R-A14Y-07 KDM4C-IFNA22P 6 12 chr9:6990524:+ chr9:21278427:- . NA TCGA-BT-A20W-01A-21R-A14Y-07 DAP-CCT5 19 76 chr5:10748175:- chr5:10258111:+ INFRAME NA TCGA-BT-A20W-01A-21R-A14Y-07 ADIPOR2-DCP1B 10 70 chr12:1691213:+ chr12:1967910:- . NA TCGA-BT-A20W-01A-21R-A14Y-07 TRPM7-SRP14 7 79 chr15:50686531:- chr15:40038948:- INFRAME NA TCGA-BT-A20W-01A-21R-A14Y-07 SMARCC1-SHISA5 12 51 chr3:47706409:- chr3:48469843:- INFRAME NA TCGA-BT-A20W-01A-21R-A14Y-07 DDI2-FBXO15 7 26 chr1:15664111:+ chr18:74073557:- . NA TCGA-BT-A20W-01A-21R-A14Y-07 CYP4B1-FAAHP1 1 11 chr1:46815264:+ chr1:46482210:+ . NA TCGA-BT-A20W-01A-21R-A14Y-07 MACROD1-NRXN2 3 3 chr11:64151239:- chr11:64608082:- INFRAME NA TCGA-BT-A20W-01A-21R-A14Y-07 ARID1A-HNRNPK 1 8 chr1:26732792:+ chr9:83969440:- FRAMESHIFT Likely Oncogenic NA TCGA-BT-A20W-01A-21R-A14Y-07 ANKRD46-ODF1 1 7 chr8:100522606:- chr8:102560452:+ FRAMESHIFT NA TCGA-BT-A20W-01A-21R-A14Y-07 FAM169A-ANKRD31 1 3 chr5:74834426:- chr5:75068664:- INFRAME NA TCGA-BT-A20W-01A-21R-A14Y-07 TMEM178B-NDUFB2 1 2 chr7:141074692:+ chr7:140702866:+ FRAMESHIFT NA TCGA-BT-A20X-01A-11R-A16R-07 MARCH9-KCNC2 1 8 chr12:57757084:+ chr12:75051317:- INFRAME NA TCGA-BT-A2LA-01A-11R-A18C-07 STK24-TMTC4 11 33 chr13:98576745:- chr13:100606427:- INFRAME NA TCGA-BT-A2LA-01A-11R-A18C-07 FAM13C-ZNF365 3 8 chr10:59251575:- chr10:62623103:+ FRAMESHIFT NA TCGA-BT-A2LA-01A-11R-A18C-07 FECH-NCMAP 2 5 chr18:57580073:- chr1:24595424:+ . NA TCGA-BT-A2LA-01A-11R-A18C-07 KMT2A-SLC22A10 1 7 chr11:118474315:+ chr11:63362380:+ . Likely Oncogenic NA TCGA-BT-A2LA-01A-11R-A18C-07 HELZ-ABCA10 1 6 chr17:67243784:- chr17:69227285:- . NA TCGA-BT-A2LA-01A-11R-A18C-07 ALDOA-RPL7A 1 1 chr16:30069389:+ chr9:133350001:+ INFRAME NA TCGA-BT-A2LB-01A-11R-A18C-07 KIAA0430-IQCK 44 177 chr16:15630332:- chr16:19856487:+ FRAMESHIFT NA TCGA-BT-A2LD-01A-12R-A20F-07 RBM39-PRDM5 4 5 chr20:35741941:- chr4:120821345:- . NA TCGA-BT-A2LD-01A-12R-A20F-07 COX6C-TDRD12 2 8 chr8:99891908:- chr19:32790531:+ FRAMESHIFT NA TCGA-BT-A2LD-01A-12R-A20F-07 HIST1H2AC-HP1BP3 2 1 chr6:26124633:+ chr1:20773610:- . NA TCGA-BT-A2LD-01A-12R-A20F-07 PTDSS1-NIPAL2 2 1 chr8:96287146:+ chr8:98254087:- INFRAME NA TCGA-BT-A2LD-01A-12R-A20F-07 GNA12-URI1 1 1 chr7:2794928:- chr19:30015536:+ INFRAME NA TCGA-BT-A3PH-01A-11R-A220-07 WDR62-HCST 20 131 chr19:36084744:+ chr19:35903351:+ INFRAME NA TCGA-BT-A3PH-01A-11R-A220-07 UBE2L3-YPEL1 1 3 chr22:21567771:+ chr22:21710908:- . NA TCGA-BT-A3PH-01A-11R-A220-07 B4GALT4-H19 1000 1000 chr3:119211732:- chr11:1997807:- . NA TCGA-BT-A3PK-01A-21R-A220-07 EXT1-FAM155A 2 14 chr8:118110085:- chr13:107170786:- INFRAME NA TCGA-BT-A3PK-01A-21R-A220-07 MED16-MEX3D 2 11 chr19:881559:- chr19:1556923:- INFRAME NA TCGA-BT-A3PK-01A-21R-A220-07 ROCK1-GUCA2B 4 3 chr18:21023620:- chr1:42154680:+ INFRAME NA TCGA-BT-A3PK-01A-21R-A220-07 HIVEP3-ZMYND12 1 6 chr1:41918413:- chr1:42436543:- . NA TCGA-BT-A3PK-01A-21R-A220-07 SCMH1-CAP1 1 2 chr1:41242059:- chr1:40059337:+ . NA TCGA-BT-A3PK-01A-21R-A220-07 PPP2CB-MYOC 1 1 chr8:30812320:- chr1:171638722:- FRAMESHIFT NA TCGA-BT-A42C-01A-11R-A23N-07 SRGAP1-KCNMB4 49 457 chr12:63844883:+ chr12:70400209:+ FRAMESHIFT NA TCGA-BT-A42C-01A-11R-A23N-07 MDM1-FRS2 2 15 chr12:68302620:- chr12:69486202:+ . NA TCGA-BT-A42C-01A-11R-A23N-07 FCHSD2-PPFIA1 1 13 chr11:73140031:- chr11:70348189:+ INFRAME NA TCGA-BT-A42C-01A-11R-A23N-07 NUP107-TMBIM4 3 4 chr12:68719654:+ chr12:66138769:- FRAMESHIFT NA TCGA-BT-A42C-01A-11R-A23N-07 PTPRR-TPH2 1 9 chr12:70698265:- chr12:72140120:+ . NA TCGA-BT-A42C-01A-11R-A23N-07 AFG3L2-LYZ 1 5 chr18:12363782:- chr12:69350108:+ FRAMESHIFT NA TCGA-BT-A42C-01A-11R-A23N-07 SNHG16-MFSD11 1 5 chr17:76559043:+ chr17:76769746:+ . NA TCGA-BT-A42E-01A-11R-A23W-07 POT1-RTKN2 1 3 chr7:124928815:- chr10:62199861:- . NA TCGA-BT-A42F-01A-11R-A23W-07 PEAK1-CIB2 1 17 chr15:77286423:- chr15:78123739:- . NA TCGA-BT-A42F-01A-11R-A23W-07 GNB5-BNIP2 2 11 chr15:52147459:- chr15:59664120:- INFRAME NA TCGA-C4-A0EZ-01A-21R-A24X-07 MIAT-SEZ6L 5 11 chr22:26646959:+ chr22:26340436:+ . NA TCGA-C4-A0EZ-01A-21R-A24X-07 CALCB-INSC 1000 1000 chr11:15077470:+ chr11:15175741:+ . NA TCGA-C4-A0F0-01A-12R-A10U-07 DYNC2H1-C11orf70 7 82 chr11:103129005:+ chr11:102047815:+ FRAMESHIFT NA TCGA-C4-A0F0-01A-12R-A10U-07 PTK2-EIF3E 1 4 chr8:141001125:- chr8:108309463:- . NA TCGA-C4-A0F0-01A-12R-A10U-07 SAP30-GALNT7 1000 1000 chr4:173374037:+ chr4:173247980:+ INFRAME NA TCGA-C4-A0F6-01A-11R-A10U-07 TBC1D8B-RNF128 5 13 chrX:106802983:+ chrX:106795580:+ INFRAME NA TCGA-C4-A0F6-01A-11R-A10U-07 CCT2-BEST3 1 2 chr12:69589687:+ chr12:69678893:- INFRAME NA TCGA-CF-A1HR-01A-11R-A13Y-07 MSMO1-CPE 8 10 chr4:165327764:+ chr4:165464390:+ . NA TCGA-CF-A1HR-01A-11R-A13Y-07 NUP85-ZDHHC18 2 7 chr17:75233158:+ chr1:26853726:+ FRAMESHIFT NA TCGA-CF-A1HS-01A-11R-A13Y-07 ATPAF1-OSBPL9 15 91 chr1:46643194:- chr1:51776833:+ INFRAME NA TCGA-CF-A1HS-01A-11R-A13Y-07 AASDHPPT-CARD16 3 22 chr11:106079692:+ chr11:105044658:- INFRAME NA TCGA-CF-A1HS-01A-11R-A13Y-07 SHROOM2-REPS2 6 9 chrX:9912587:+ chrX:17103718:+ . NA TCGA-CF-A1HS-01A-11R-A13Y-07 FRMD6-RTN4 3 9 chr14:51570410:+ chr2:54987698:- . NA TCGA-CF-A1HS-01A-11R-A13Y-07 RICTOR-HCN1 2 9 chr5:39074111:- chr5:45645608:- FRAMESHIFT NA TCGA-CF-A1HS-01A-11R-A13Y-07 RTN4-FRMD6-AS2 2 7 chr2:55010087:- chr14:51584283:- . NA TCGA-CF-A1HS-01A-11R-A13Y-07 ZFAND3-DNAH8 2 7 chr6:37820016:+ chr6:38722776:+ . NA TCGA-CF-A27C-01A-11R-A16R-07 POLE-ANKS1B 5 12 chr12:132687254:- chr12:98832136:- FRAMESHIFT NA TCGA-CF-A3MG-01A-11R-A20F-07 SHANK2-LRTOMT 5 22 chr11:70798443:- chr11:72093496:+ INFRAME NA TCGA-CF-A3MH-01A-11R-A20F-07 PLEKHA7-SERGEF 10 33 chr11:17013989:- chr11:17788413:- FRAMESHIFT NA TCGA-CF-A47V-01A-11R-A23W-07 RNF4-ZFYVE28 8 124 chr4:2596329:+ chr4:2320271:- . NA TCGA-CF-A47X-01A-31R-A23W-07 TRAPPC9-PLAT 2 6 chr8:140360050:- chr8:42176151:- FRAMESHIFT NA TCGA-CF-A47X-01A-31R-A23W-07 MORC3-PCP4 1 8 chr21:36320303:+ chr21:39898476:+ INFRAME NA TCGA-CF-A7I0-01A-22R-A352-07 CIPC-LRRC74A 5 19 chr14:77098361:+ chr14:76865968:+ . NA TCGA-CF-A7I0-01A-22R-A352-07 SCYL2-UTP20 3 2 chr12:100298175:+ chr12:101356926:+ FRAMESHIFT NA TCGA-CF-A7I0-01A-22R-A352-07 MRPL42-POLR3B 1000 1000 chr12:93487660:+ chr12:106509420:+ INFRAME NA TCGA-CF-A8HX-01A-11R-A36F-07 ANO1-CWF19L2 5 18 chr11:70132079:+ chr11:107443049:- FRAMESHIFT NA TCGA-CF-A8HY-01A-11R-A36F-07 NCAPD3-KBTBD3 2 5 chr11:134192689:- chr11:106059109:- . NA TCGA-CF-A8HY-01A-11R-A36F-07 RASSF7-EPS8L2 1 8 chr11:561033:+ chr11:722091:+ . NA TCGA-CU-A0YN-01A-21R-A10U-07 PUM1-LAPTM5 26 208 chr1:31028796:- chr1:30742549:- INFRAME NA TCGA-CU-A0YN-01A-21R-A10U-07 LMBR1L-KCNK6 18 75 chr12:49110484:- chr19:38326593:+ FRAMESHIFT NA TCGA-CU-A0YN-01A-21R-A10U-07 ZNF606-RDH13 6 62 chr19:57980162:- chr19:55067715:- . NA TCGA-CU-A0YN-01A-21R-A10U-07 GRB10-STEAP1B 1 16 chr7:50755887:- chr7:22494886:- . NA TCGA-CU-A0YN-01A-21R-A10U-07 SLC2A13-FAM120A 4 2 chr12:40028301:- chr9:93561109:+ INFRAME NA TCGA-CU-A0YN-01A-21R-A10U-07 COBL-SEPT14 1 4 chr7:51083058:- chr7:55807258:- INFRAME NA TCGA-CU-A0YN-01A-21R-A10U-07 ATF7IP-PLBD1 1 1 chr12:14365827:+ chr12:14511711:- . NA TCGA-CU-A0YN-01A-21R-A10U-07 SLC2A13-ZNF329 1000 1000 chr12:40028301:- chr19:58142661:- . NA TCGA-CU-A0YO-01A-11R-A10U-07 RBM27-SLC35E2B 8 28 chr5:146219103:+ chr1:1666019:- FRAMESHIFT NA TCGA-CU-A0YO-01A-11R-A10U-07 RAB4A-SNRPB 7 18 chr1:229271370:+ chr20:2467758:- FRAMESHIFT NA TCGA-CU-A0YO-01A-11R-A10U-07 RBM17-PSAP 7 2 chr10:6089193:+ chr10:71834505:- FRAMESHIFT NA TCGA-CU-A0YO-01A-11R-A10U-07 SNRPB-RAB4A 2 15 chr20:2470688:- chr1:229286486:+ FRAMESHIFT NA TCGA-CU-A0YO-01A-11R-A10U-07 LUZP1-NEDD4L 1 6 chr1:23091190:- chr18:58252001:+ INFRAME NA TCGA-CU-A0YR-01A-12R-A10U-07 TMEM189-OFCC1 2 22 chr20:50129546:- chr6:9775889:- INFRAME NA TCGA-CU-A0YR-01A-12R-A10U-07 GRB7-PLXDC1 3 10 chr17:39744207:+ chr17:39067959:- INFRAME NA TCGA-CU-A0YR-01A-12R-A10U-07 ZNF280D-STK3 2 2 chr15:56733458:- chr8:98707311:- . NA TCGA-CU-A3KJ-01A-11R-A21D-07 BCL9-MPTX1 14 58 chr1:147600337:+ chr1:159276507:+ . NA TCGA-CU-A3KJ-01A-11R-A21D-07 SEPHS2-MAPK3 6 8 chr16:30445222:- chr16:30114377:- . NA TCGA-CU-A3KJ-01A-11R-A21D-07 HELZ-CEP112 1 15 chr17:67120405:- chr17:65689218:- FRAMESHIFT NA TCGA-CU-A3KJ-01A-11R-A21D-07 ERBB2-CTTN 1 1 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-CU-A3QU-01A-11R-A22U-07 HTT-GRK4 4 23 chr4:3130423:+ chr4:3013688:+ INFRAME NA TCGA-CU-A3QU-01A-11R-A22U-07 SPIDR-UBE2V2 2 25 chr8:47294030:+ chr8:48043033:+ FRAMESHIFT NA TCGA-CU-A3QU-01A-11R-A22U-07 ZNF267-AGBL4 3 10 chr16:31873969:+ chr1:48867230:- INFRAME NA TCGA-CU-A3QU-01A-11R-A22U-07 TFRC-FBLN1 1 2 chr3:196082043:- chr22:45518682:+ . NA TCGA-CU-A3YL-01A-11R-A22U-07 NAA35-LAMC3 3 12 chr9:86013897:+ chr9:131075831:+ INFRAME NA TCGA-CU-A5W6-01A-11R-A28M-07 ENAH-UCHL5 5 12 chr1:225652686:- chr1:193051817:- FRAMESHIFT NA TCGA-CU-A5W6-01A-11R-A28M-07 LIMCH1-CWH43 3 14 chr4:41524478:+ chr4:49028629:+ INFRAME NA TCGA-CU-A5W6-01A-11R-A28M-07 GAK-LUC7L3 1 16 chr4:932043:- chr17:50736960:+ FRAMESHIFT NA TCGA-CU-A5W6-01A-11R-A28M-07 FNBP4-SVIL 1 4 chr11:47765270:- chr10:29569312:- . NA TCGA-CU-A5W6-01A-11R-A28M-07 SMARCA4-CARM1 1 3 chr19:11027950:+ chr19:10904951:+ INFRAME Likely Oncogenic NA TCGA-CU-A72E-01A-12R-A33J-07 IP6K1-RHOA 51 161 chr3:49747818:- chr3:49375591:- . NA TCGA-CU-A72E-01A-12R-A33J-07 RPS14-MB21D2 5 9 chr5:150446802:- chr3:192799650:- FRAMESHIFT NA TCGA-DK-A1A3-01A-11R-A13Y-07 ERBB2-PPP1R1B 11 25 chr17:39710481:+ chr17:39633883:+ INFRAME NA TCGA-DK-A1A3-01A-11R-A13Y-07 CEBPG-TDRD12 8 16 chr19:33373895:+ chr19:32748476:+ . NA TCGA-DK-A1A3-01A-11R-A13Y-07 PSMD8-MAP2K5 1 13 chr19:38382228:+ chr15:67806646:+ INFRAME NA TCGA-DK-A1A3-01A-11R-A13Y-07 ERRFI1-LUZP1 2 6 chr1:8026158:- chr1:23109127:- . Likely Oncogenic NA TCGA-DK-A1A3-01A-11R-A13Y-07 BCL2L13-ZNF383 1 5 chr22:17702386:+ chr19:37242469:+ INFRAME NA TCGA-DK-A1A3-01A-11R-A13Y-07 EPS15-CC2D1B 1 4 chr1:51519199:- chr1:52346203:- . NA TCGA-DK-A1A5-01A-11R-A13Y-07 ERBB2-CTTN 7 20 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-DK-A1A5-01A-11R-A13Y-07 COIL-CA4 4 12 chr17:56960775:- chr17:60155314:+ FRAMESHIFT NA TCGA-DK-A1A6-01A-11R-A13Y-07 METTL16-VPS53 11 38 chr17:2511759:- chr17:560573:- . NA TCGA-DK-A1A6-01A-11R-A13Y-07 CPT1A-NANOGNBP1 4 12 chr11:68812437:- chr2:100660215:+ . NA TCGA-DK-A1A6-01A-11R-A13Y-07 STK3-MRPL48 4 12 chr8:98825515:- chr11:73805027:+ FRAMESHIFT NA TCGA-DK-A1A6-01A-11R-A13Y-07 SNRNP40-ADGRB2 4 8 chr1:31267871:- chr1:31744731:- FRAMESHIFT NA TCGA-DK-A1A6-01A-11R-A13Y-07 CSPP1-PPP1R42 1 16 chr8:67064496:+ chr8:66971140:- FRAMESHIFT NA TCGA-DK-A1A6-01A-11R-A13Y-07 VPS13B-MYO9B 2 9 chr8:99193057:+ chr19:17211647:+ FRAMESHIFT NA TCGA-DK-A1A6-01A-11R-A13Y-07 ZNF248-FAM107B 2 8 chr10:37831232:- chr10:14553387:- . NA TCGA-DK-A1A6-01A-11R-A13Y-07 MRPL48-PRSS23 1 8 chr11:73808350:+ chr11:86932695:+ . NA TCGA-DK-A1A6-01A-11R-A13Y-07 SHANK2-MATN2 1 3 chr11:71056481:- chr8:98021205:+ FRAMESHIFT NA TCGA-DK-A1A6-01A-11R-A13Y-07 ISYNA1-PABPC1 1 2 chr19:18438093:- chr8:100709223:- . NA TCGA-DK-A1A6-01A-11R-A13Y-07 FABP3-ADGRB2 1 1 chr1:31372942:- chr1:31756815:- FRAMESHIFT NA TCGA-DK-A1A7-01A-11R-A13Y-07 NECTIN4-PFDN2 6 45 chr1:161089218:- chr1:161102375:- FRAMESHIFT NA TCGA-DK-A1A7-01A-11R-A13Y-07 SHTN1-PRDX3 3 5 chr10:117005022:- chr10:119174592:- INFRAME NA TCGA-DK-A1A7-01A-11R-A13Y-07 KIF27-UBQLN1 2 4 chr9:83850099:- chr9:83669327:- INFRAME NA TCGA-DK-A1AC-01A-11R-A13Y-07 TAOK1-RB1CC1 41 97 chr17:29482288:+ chr8:52642812:- FRAMESHIFT NA TCGA-DK-A1AC-01A-11R-A13Y-07 PCMTD1-RHOT1 28 81 chr8:51860845:- chr17:32182757:+ FRAMESHIFT NA TCGA-DK-A1AC-01A-11R-A13Y-07 KMT5B-MYO1D 11 42 chr11:68180132:- chr17:32638835:- INFRAME NA TCGA-DK-A1AC-01A-11R-A13Y-07 SLC4A4-TMPRSS11E 4 40 chr4:71236649:+ chr4:68461821:+ INFRAME NA TCGA-DK-A1AC-01A-11R-A13Y-07 TMEM201-SPSB1 1 9 chr1:9602272:+ chr1:9355743:+ . NA TCGA-DK-A1AC-01A-11R-A13Y-07 TPCN2-MYO1D 1 3 chr11:69088366:+ chr17:32605241:- . NA TCGA-DK-A1AD-01A-11R-A13Y-07 GTF2F2-S100A4 104 396 chr13:45120721:+ chr1:153544809:- . NA TCGA-DK-A1AD-01A-11R-A13Y-07 EEA1-CRADD 17 58 chr12:92891629:- chr12:93849970:+ FRAMESHIFT NA TCGA-DK-A1AD-01A-11R-A13Y-07 GTF2F2-S100A3 10 77 chr13:45120721:+ chr1:153548490:- . NA TCGA-DK-A1AD-01A-11R-A13Y-07 PTK2-UGT2A3 10 28 chr8:141001125:- chr4:68932759:- . NA TCGA-DK-A1AD-01A-11R-A13Y-07 PPARG-CDKAL1 2 12 chr3:12417154:+ chr6:20649293:+ INFRAME NA TCGA-DK-A1AD-01A-11R-A13Y-07 STT3B-ZNF860 2 5 chr3:31533312:+ chr3:31988660:+ . NA TCGA-DK-A1AD-01A-11R-A13Y-07 SCGB2B2-ERCC1 1 4 chr19:34675630:- chr19:45423381:- . NA TCGA-DK-A1AE-01A-11R-A13Y-07 USP37-TNS1 1 5 chr2:218558498:- chr2:217836211:- FRAMESHIFT NA TCGA-DK-A1AE-01A-11R-A13Y-07 HPS1-PYROXD2 1000 1000 chr10:98446809:- chr10:98388510:- . NA TCGA-DK-A1AF-01A-11R-A13Y-07 C2CD3-MYEOV 2 16 chr11:74048205:- chr11:69341510:+ . NA TCGA-DK-A1AF-01A-11R-A13Y-07 NEK4-SETD2 3 12 chr3:52737586:- chr3:47067118:- INFRAME Likely Oncogenic NA TCGA-DK-A2HX-01A-12R-A18C-07 FBXW7-ARHGAP10 4 33 chr4:152534941:- chr4:148071993:+ . Likely Oncogenic NA TCGA-DK-A2I1-01A-11R-A180-07 DGUOK-STAMBP 8 26 chr2:73927052:+ chr2:73859254:+ FRAMESHIFT NA TCGA-DK-A2I1-01A-11R-A180-07 SMG9-KCNN4 5 26 chr19:43737597:- chr19:43767089:- . NA TCGA-DK-A2I1-01A-11R-A180-07 ATF7IP2-IGHV3OR16-7 3 15 chr16:10431455:+ chr16:33938650:- . NA TCGA-DK-A2I1-01A-11R-A180-07 DIRAS2-GNA14 5 5 chr9:90642752:- chr9:77434522:- . NA TCGA-DK-A2I1-01A-11R-A180-07 CD96-ATP6V0CP2 3 11 chr3:111365918:+ chr3:111478743:+ . NA TCGA-DK-A2I1-01A-11R-A180-07 ZNF500-MMP25 2 13 chr16:4760492:- chr16:3055830:+ FRAMESHIFT NA TCGA-DK-A2I1-01A-11R-A180-07 NFAT5-CCDC113 3 8 chr16:69568548:+ chr16:58252727:+ FRAMESHIFT NA TCGA-DK-A2I1-01A-11R-A180-07 SPAG6-PLXDC2 1 12 chr10:22368678:+ chr10:20279703:+ FRAMESHIFT NA TCGA-DK-A2I1-01A-11R-A180-07 IQCK-CASC16 1 9 chr16:19764112:+ chr16:52591067:- . NA TCGA-DK-A2I1-01A-11R-A180-07 FGD3-SYK 1 2 chr9:92947729:+ chr9:90843858:+ . NA TCGA-DK-A2I2-01A-11R-A180-07 RPL36AL-MAP4K5 6 3 chr14:49620562:- chr14:50456594:- . NA TCGA-DK-A2I2-01A-11R-A180-07 NUFIP2-ZFP69B 3 6 chr17:29293783:- chr1:40450656:+ . NA TCGA-DK-A2I2-01A-11R-A180-07 SLC12A6-RPL13 1 1 chr15:34336410:- chr16:89561578:+ FRAMESHIFT NA TCGA-DK-A2I4-01A-11R-A21D-07 MCF2L-STK24 1 6 chr13:112968714:+ chr13:98519473:- FRAMESHIFT NA TCGA-DK-A2I6-01A-12R-A18C-07 VPS13B-CDADC1 5 33 chr8:99391704:+ chr13:49291684:+ INFRAME NA TCGA-DK-A2I6-01A-12R-A18C-07 ERBB2-TATDN1 10 12 chr17:39712448:+ chr8:124495542:- INFRAME NA TCGA-DK-A2I6-01A-12R-A18C-07 MTSS1-ERBB2 5 22 chr8:124727884:- chr17:39706990:+ FRAMESHIFT NA TCGA-DK-A2I6-01A-12R-A18C-07 RBBP8-TP53 5 12 chr18:23016924:+ chr17:7676622:- . Likely Oncogenic NA TCGA-DK-A2I6-01A-12R-A18C-07 CAB39L-CPQ 3 6 chr13:49350744:- chr8:96834973:+ FRAMESHIFT NA TCGA-DK-A2I6-01A-12R-A18C-07 ETV6-PRH2 1 9 chr12:11752579:+ chr12:10930269:+ INFRAME Likely Oncogenic NA TCGA-DK-A2I6-01A-12R-A18C-07 ATAD5-SIPA1L3 1 4 chr17:30858323:+ chr19:38162253:+ INFRAME NA TCGA-DK-A2I6-01A-12R-A18C-07 CMSS1-CRYBG3 1 4 chr3:99818043:+ chr3:97843195:+ FRAMESHIFT NA TCGA-DK-A3IK-01A-32R-A21D-07 CYC1-SLC52A2 16 32 chr8:144096744:+ chr8:144359184:+ . NA TCGA-DK-A3IK-01A-32R-A21D-07 NPAS2-CNOT11 9 57 chr2:100949480:+ chr2:101262539:+ INFRAME NA TCGA-DK-A3IK-01A-32R-A21D-07 ATG2B-SLC22A17 4 50 chr14:96316533:- chr14:23346936:- FRAMESHIFT NA TCGA-DK-A3IK-01A-32R-A21D-07 ENTPD5-NUBPL 8 19 chr14:73970010:- chr14:31826629:+ INFRAME NA TCGA-DK-A3IK-01A-32R-A21D-07 LTBP1-PLB1 4 16 chr2:33188851:+ chr2:28548860:+ INFRAME NA TCGA-DK-A3IK-01A-32R-A21D-07 MAP3K5-PERP 4 10 chr6:136791710:- chr6:138096494:- INFRAME NA TCGA-DK-A3IK-01A-32R-A21D-07 TOM1L2-SREBF1 4 10 chr17:17972262:- chr17:17820521:- INFRAME NA TCGA-DK-A3IK-01A-32R-A21D-07 VWA8-TPTE2P5 3 12 chr13:41865736:- chr13:40826594:- . NA TCGA-DK-A3IK-01A-32R-A21D-07 NOS1AP-LRRC52 3 10 chr1:162154476:+ chr1:165563505:+ FRAMESHIFT NA TCGA-DK-A3IK-01A-32R-A21D-07 RAP1B-NUP107 2 4 chr12:68611043:+ chr12:68734708:+ . NA TCGA-DK-A3IM-01A-11R-A20F-07 FAM49B-AK5 3 22 chr8:129903312:- chr1:77483317:+ . NA TCGA-DK-A3IM-01A-11R-A20F-07 MARS-NOP2 3 17 chr12:57504299:+ chr12:6563946:- INFRAME NA TCGA-DK-A3IM-01A-11R-A20F-07 ITCH-NDUFA1 1 8 chr20:34449480:+ chrX:119873304:+ FRAMESHIFT NA TCGA-DK-A3IN-01A-11R-A20F-07 LIMK2-CDC45 29 67 chr22:31268200:+ chr22:19516527:+ INFRAME NA TCGA-DK-A3IN-01A-11R-A20F-07 GALNT18-IER3IP1 13 36 chr11:11432621:- chr18:47157537:- INFRAME NA TCGA-DK-A3IN-01A-11R-A20F-07 TAPT1-LDB2 3 10 chr4:16226259:- chr4:16595875:- INFRAME NA TCGA-DK-A3IN-01A-11R-A20F-07 CABIN1-GRIN2A 2 6 chr22:24119698:+ chr16:9891100:- FRAMESHIFT NA TCGA-DK-A3IQ-01A-31R-A32Y-07 ZCCHC7-FGF7P3 1 15 chr9:37120623:+ chr9:39818924:- . NA TCGA-DK-A3IQ-01A-31R-A32Y-07 KLHL18-HEMK1 2 8 chr3:47283094:+ chr3:50570931:+ . NA TCGA-DK-A3IQ-01A-31R-A32Y-07 RNF213-BAIAP2 1 11 chr17:80298518:+ chr17:81084832:+ FRAMESHIFT NA TCGA-DK-A3IQ-01A-31R-A32Y-07 EPS8-PIK3C2G 2 5 chr12:15789161:- chr12:18488449:+ . NA TCGA-DK-A3IQ-01A-31R-A32Y-07 AIG1-TIAM2 1 3 chr6:143284225:+ chr6:154944116:+ . NA TCGA-DK-A3IS-01A-21R-A21D-07 MAN2B2-TACC3 15 51 chr4:6578498:+ chr4:1735731:+ FRAMESHIFT NA TCGA-DK-A3IS-01A-21R-A21D-07 GPR78-POLN 16 26 chr4:8558981:+ chr4:2131290:- . NA TCGA-DK-A3IS-01A-21R-A21D-07 PRDX5-LGR5 4 9 chr11:64321068:+ chr12:71583647:+ FRAMESHIFT NA TCGA-DK-A3IS-01A-21R-A21D-07 TBC1D14-HTRA3 1 15 chr4:6924111:+ chr4:8286561:+ INFRAME NA TCGA-DK-A3IS-01A-21R-A21D-07 ZFYVE28-TACC3 3 6 chr4:2418285:- chr4:1739702:+ INFRAME NA TCGA-DK-A3IS-01A-21R-A21D-07 NCOA3-DUSP15 1 8 chr20:47502019:+ chr20:31867153:- . NA TCGA-DK-A3IS-01A-21R-A21D-07 ZMYM6-ACOX3 1 3 chr1:35030547:- chr4:8373628:- FRAMESHIFT NA TCGA-DK-A3IS-01A-21R-A21D-07 ACOX3-VAMP7 1 1 chr4:8428351:- chrY:57126221:+ . NA TCGA-DK-A3IT-01A-31R-A20F-07 C6orf132-GUCA1B 3 5 chr6:42110216:- chr6:42188731:- FRAMESHIFT NA TCGA-DK-A3IT-01A-31R-A20F-07 PARL-ABCC5 2 8 chr3:183884722:- chr3:183938060:- INFRAME NA TCGA-DK-A3IT-01A-31R-A20F-07 ACOX1-SRP68 1 10 chr17:75978534:- chr17:76067330:- INFRAME NA TCGA-DK-A3IT-01A-31R-A20F-07 MTA2-HNRNPUL2 2 6 chr11:62600622:- chr11:62724426:- FRAMESHIFT NA TCGA-DK-A3IT-01A-31R-A20F-07 SLC12A6-GOLGA8A 3 2 chr15:34336410:- chr15:34391426:- . NA TCGA-DK-A3IT-01A-31R-A20F-07 STX8-MYOCD 2 1 chr17:9568371:- chr17:12705128:+ FRAMESHIFT NA TCGA-DK-A3IT-01A-31R-A20F-07 IRF6-GRHL3 1 2 chr1:209805947:- chr1:24331426:+ . NA TCGA-DK-A3IV-01A-22R-A21D-07 TPX2-REM1 12 30 chr20:31757582:+ chr20:31482287:+ FRAMESHIFT NA TCGA-DK-A3IV-01A-22R-A21D-07 TRPC4AP-ASIP 7 34 chr20:35035123:- chr20:34260365:+ . NA TCGA-DK-A3IV-01A-22R-A21D-07 VPS41-NPSR1 3 23 chr7:38869146:- chr7:34811770:+ INFRAME NA TCGA-DK-A3IV-01A-22R-A21D-07 ANLN-POU6F2 2 3 chr7:36443862:+ chr7:39085860:+ INFRAME NA TCGA-DK-A3WW-01A-22R-A23N-07 EMC2-TANK 1 1 chr8:108470121:+ chr2:161163114:+ . NA TCGA-DK-A3WX-01A-22R-A22U-07 PLEKHA6-KISS1 2 5 chr1:204367799:- chr1:204192914:- . NA TCGA-DK-A3WY-01A-11R-A22U-07 KCTD20-ETV7 7 26 chr6:36443111:+ chr6:36354687:- . NA TCGA-DK-A3WY-01A-11R-A22U-07 PHLDB2-KCNAB1 2 4 chr3:111859576:+ chr3:156421616:+ . NA TCGA-DK-A3X2-01A-11R-A22U-07 FXYD3-TARM1 10 168 chr19:35119416:+ chr19:54075918:- INFRAME NA TCGA-DK-A3X2-01A-11R-A22U-07 DSG4-DSCAS 19 60 chr18:31409808:+ chr18:31162535:+ . NA TCGA-DK-A3X2-01A-11R-A22U-07 ZFP30-CEACAM7 20 44 chr19:37644610:- chr19:41687221:- INFRAME NA TCGA-DK-A3X2-01A-11R-A22U-07 NDC1-GLIS1 12 19 chr1:53818971:- chr1:53600278:- INFRAME NA TCGA-DK-A3X2-01A-11R-A22U-07 SPEN-EFHD2 8 32 chr1:15848150:+ chr1:15425871:+ INFRAME Likely Oncogenic NA TCGA-DK-A3X2-01A-11R-A22U-07 NUP85-KCTD2 1 11 chr17:75213119:+ chr17:75049220:+ INFRAME NA TCGA-DK-A3X2-01A-11R-A22U-07 HERC1-DAPK2 2 6 chr15:63833827:- chr15:63939361:- . NA TCGA-DK-A3X2-01A-11R-A22U-07 CTDSPL-WRN 1 6 chr3:37862278:+ chr8:31096768:+ FRAMESHIFT NA TCGA-DK-A3X2-01A-11R-A22U-07 UHRF2-IL33 1 6 chr9:6413643:+ chr9:6241684:+ . NA TCGA-DK-A3X2-01A-11R-A22U-07 MELTF-IGSF11 1 3 chr3:197003901:- chr3:118905718:- INFRAME NA TCGA-DK-A6AV-01A-12R-A30C-07 CDH3-CHKA 68 400 chr16:68684824:+ chr11:68068937:- INFRAME NA TCGA-DK-A6AV-01A-12R-A30C-07 RPS6KB2-ST3GAL2 2 27 chr11:67429595:+ chr16:70388546:- FRAMESHIFT NA TCGA-DK-A6AV-01A-12R-A30C-07 TANGO6-FGF3 2 7 chr16:68930295:+ chr11:69816423:- INFRAME NA TCGA-DK-A6B1-01A-12R-A30C-07 MRS2-DCDC2 3 37 chr6:24405241:+ chr6:24205102:- FRAMESHIFT NA TCGA-DK-A6B1-01A-12R-A30C-07 ASH1L-SPRR2G 2 5 chr1:155438327:- chr1:153150131:- . NA TCGA-DK-A6B5-01A-11R-A31N-07 FSCN1-EIF2AK1 235 494 chr7:5593768:+ chr7:6026961:- FRAMESHIFT NA TCGA-DK-A6B5-01A-11R-A31N-07 RAF1-NXPH1 13 41 chr3:12663813:- chr7:8751008:+ . Likely Oncogenic NA TCGA-DK-A6B5-01A-11R-A31N-07 CEP162-TTC33 3 18 chr6:84193609:- chr5:40613381:- INFRAME NA TCGA-DK-A6B5-01A-11R-A31N-07 SNX14-OSTM1 4 1 chr6:85593579:- chr6:108122714:- . NA TCGA-DK-A6B5-01A-11R-A31N-07 CAPN1-TNKS1BP1 1 1 chr11:65183592:+ chr11:57301041:- INFRAME NA TCGA-DK-A6B6-01A-11R-A30C-07 COPS2-CTTN 4 20 chr15:49155525:- chr11:70405265:+ . NA TCGA-DK-A6B6-01A-11R-A30C-07 ESYT1-PA2G4 3 8 chr12:56128709:+ chr12:56106588:+ FRAMESHIFT NA TCGA-DK-AA6L-01A-11R-A39I-07 ACTR5-ZNF682 2 3 chr20:38756039:+ chr19:20015842:- FRAMESHIFT NA TCGA-DK-AA6P-01A-11R-A39I-07 ELF1-UBL3 26 33 chr13:41060838:- chr13:29777263:- . NA TCGA-DK-AA6P-01A-11R-A39I-07 MAN1C1-TMEM50A 11 29 chr1:25763967:+ chr1:25360660:+ FRAMESHIFT NA TCGA-DK-AA6P-01A-11R-A39I-07 ATP8A2-ALG5 9 22 chr13:25862408:+ chr13:36985740:- INFRAME NA TCGA-DK-AA6P-01A-11R-A39I-07 B3GLCT-ALOX5AP 2 41 chr13:31323895:+ chr13:30755944:+ FRAMESHIFT NA TCGA-DK-AA6P-01A-11R-A39I-07 RPL41-SMARCC2 2 17 chr12:56116799:+ chr12:56186240:- INFRAME NA TCGA-DK-AA6P-01A-11R-A39I-07 ERCC2-NOVA2 3 10 chr19:45368630:- chr19:45940945:- INFRAME NA TCGA-DK-AA6P-01A-11R-A39I-07 RAD9A-AHNAK 4 1 chr11:67321333:+ chr11:62433891:- . NA TCGA-DK-AA6P-01A-11R-A39I-07 UBL3-CDK8 3 4 chr13:29849512:- chr13:26337567:+ FRAMESHIFT NA TCGA-DK-AA6P-01A-11R-A39I-07 ADAP1-MAD1L1 2 5 chr7:926553:- chr7:2069338:- INFRAME NA TCGA-DK-AA6P-01A-11R-A39I-07 EIF3L-TRIOBP 1 8 chr22:37855644:+ chr22:37754877:+ FRAMESHIFT NA TCGA-DK-AA6P-01A-11R-A39I-07 C12orf56-TMEM5 1 7 chr12:64390314:- chr12:63805234:+ FRAMESHIFT NA TCGA-DK-AA6P-01A-11R-A39I-07 PTPRK-SAMD3 1 5 chr6:128397566:- chr6:130184623:- FRAMESHIFT NA TCGA-DK-AA6R-01A-11R-A42T-07 CAT-FAM21EP 140 485 chr11:34464235:+ chr10:50021467:- . NA TCGA-DK-AA6R-01A-11R-A42T-07 ALG14-JAK1 2 16 chr1:95027129:- chr1:64847675:- INFRAME Likely Oncogenic NA TCGA-DK-AA6R-01A-11R-A42T-07 RAB27B-WDR7 2 12 chr18:54828700:+ chr18:56879944:+ . NA TCGA-DK-AA6S-01A-21R-A39I-07 PPP1R10-FLOT1 2 9 chr6:30616478:- chr6:30731100:- . NA TCGA-DK-AA6S-01A-21R-A39I-07 FANCI-ABHD2 1 8 chr15:89278774:+ chr15:89175812:+ INFRAME NA TCGA-DK-AA6T-01A-11R-A39I-07 KCNQ5-CRYL1 2 7 chr6:73042062:+ chr13:20432296:- FRAMESHIFT NA TCGA-DK-AA6U-01A-11R-A39I-07 CDKAL1-DNAH8 18 60 chr6:20535394:+ chr6:38882910:+ . NA TCGA-DK-AA6U-01A-11R-A39I-07 URI1-SLC35F1 11 10 chr19:29986417:+ chr6:118275459:+ INFRAME NA TCGA-DK-AA6U-01A-11R-A39I-07 ABHD8-ILKAP 7 17 chr19:17300856:- chr2:238171024:- INFRAME NA TCGA-DK-AA6U-01A-11R-A39I-07 KCNK17-DNAH8 2 8 chr6:39303957:- chr6:38921369:+ FRAMESHIFT NA TCGA-DK-AA6U-01A-11R-A39I-07 ACOX1-PPP2R3B 2 5 chr17:75960215:- chrY:361590:- INFRAME NA TCGA-DK-AA6U-01A-11R-A39I-07 PPARG-MKRN2OS 1 5 chr3:12312453:+ chr3:12542022:- . NA TCGA-DK-AA6U-01A-11R-A39I-07 ZFAND3-CCNE1 1 1 chr6:37820016:+ chr19:29812532:+ . NA TCGA-DK-AA6W-01A-12R-A39I-07 ERCC6L2-PTPRD 6 1 chr9:95928864:+ chr9:9018735:- . Likely Oncogenic NA TCGA-DK-AA6W-01A-12R-A39I-07 ZNF727-VPS50 2 12 chr7:64045624:+ chr7:93271220:+ FRAMESHIFT NA TCGA-DK-AA6W-01A-12R-A39I-07 QTRT2-NAA50 2 1 chr3:114057106:+ chr3:113721937:- . NA TCGA-DK-AA75-01A-11R-A39I-07 KCNMB4-MSRB3 11 132 chr12:70367070:+ chr12:65488004:+ INFRAME NA TCGA-DK-AA75-01A-11R-A39I-07 CCT2-CPM 2 30 chr12:69586344:+ chr12:68842329:- INFRAME NA TCGA-DK-AA75-01A-11R-A39I-07 PACS1-STPG1 6 12 chr11:66070842:+ chr1:24361041:- INFRAME NA TCGA-DK-AA75-01A-11R-A39I-07 FOSL1-HN1 3 8 chr11:65900241:- chr17:75136250:- INFRAME NA TCGA-DK-AA75-01A-11R-A39I-07 CDKAL1-MSRB3 2 6 chr6:21108463:+ chr12:65488004:+ INFRAME NA TCGA-DK-AA75-01A-11R-A39I-07 ANXA4-GKN1 1 8 chr2:69781574:+ chr2:68977495:+ INFRAME NA TCGA-DK-AA75-01A-11R-A39I-07 TMEM135-FGD5 2 3 chr11:87236684:+ chr3:14880572:+ FRAMESHIFT NA TCGA-DK-AA75-01A-11R-A39I-07 XPR1-DEDD 1 6 chr1:180682411:+ chr1:161124526:- . NA TCGA-DK-AA75-01A-11R-A39I-07 TSEN2-SYN2 2 1 chr3:12505231:+ chr3:12140651:+ FRAMESHIFT NA TCGA-DK-AA76-01A-11R-A39I-07 LCOR-MAP2K6 6 44 chr10:96907747:+ chr17:69524901:+ . NA TCGA-DK-AA76-01A-11R-A39I-07 ARPP19-MYO5A 3 19 chr15:52568848:- chr15:52314203:- INFRAME NA TCGA-DK-AA76-01A-11R-A39I-07 MAPKAPK2-IL19 2 8 chr1:206685508:+ chr1:206836661:+ FRAMESHIFT NA TCGA-DK-AA77-01A-11R-A39I-07 RHOQ-CALM2 5 11 chr2:46543812:+ chr2:47170764:- INFRAME NA TCGA-DK-AA77-01A-11R-A39I-07 RHOQ-C2orf61 5 3 chr2:46543812:+ chr2:47170764:- INFRAME NA TCGA-DK-AA77-01A-11R-A39I-07 SEC11A-UBE2Q2P1 2 7 chr15:84680713:- chr15:84546277:- . NA TCGA-E5-A2PC-01A-11R-A206-07 KPNA3-FGF2 40 161 chr13:49746949:- chr4:122876321:+ FRAMESHIFT NA TCGA-E5-A2PC-01A-11R-A206-07 NUP155-TRIO 7 99 chr5:37314198:- chr5:14531744:+ FRAMESHIFT NA TCGA-E5-A2PC-01A-11R-A206-07 NCOR1-CDRT4 5 40 chr17:16086282:- chr17:15440285:- . Likely Oncogenic NA TCGA-E5-A4TZ-01A-11R-A31N-07 FBXO31-ZNRF1 13 39 chr16:87360295:- chr16:75093572:+ INFRAME NA TCGA-E5-A4TZ-01A-11R-A31N-07 XPO6-FBXO31 4 33 chr16:28211366:- chr16:87360366:- FRAMESHIFT NA TCGA-E5-A4TZ-01A-11R-A31N-07 FSCN1-EIF2AK1 1 3 chr7:5593768:+ chr7:6026961:- FRAMESHIFT NA TCGA-E5-A4TZ-01A-11R-A31N-07 RNF4-CFAP99 1000 1000 chr4:2500738:+ chr4:2436874:+ INFRAME NA TCGA-E7-A3X6-01A-12R-A22U-07 L3MBTL2-TEF 2 7 chr22:41209933:+ chr22:41387351:+ INFRAME NA TCGA-E7-A3X6-01A-12R-A22U-07 HADHA-DNAJC27 1 6 chr2:26244530:- chr2:24947748:- FRAMESHIFT NA TCGA-E7-A4IJ-01A-31R-A26T-07 NFIX-CRYBB3 4 7 chr19:12995864:+ chr22:25201377:+ . NA TCGA-E7-A4IJ-01A-31R-A26T-07 TTC28-ARHGAP15 2 8 chr22:28163092:- chr2:143767989:+ FRAMESHIFT NA TCGA-E7-A4IJ-01A-31R-A26T-07 MPHOSPH9-VPS37B 2 3 chr12:123194386:- chr12:122871061:- INFRAME NA TCGA-E7-A4IJ-01A-31R-A26T-07 PITPNB-FAM25C 1 6 chr22:27910964:- chr10:47995511:- FRAMESHIFT NA TCGA-E7-A4IJ-01A-31R-A26T-07 LARGE1-EIF4ENIF1 1 3 chr22:33564848:- chr22:31488745:- . NA TCGA-E7-A4XJ-01A-11R-A26T-07 SNX31-SPAG1 11 69 chr8:100596639:- chr8:100259042:+ . NA TCGA-E7-A4XJ-01A-11R-A26T-07 PVT1-FLJ42969 3 21 chr8:127794734:+ chr8:101054498:+ . NA TCGA-E7-A4XJ-01A-11R-A26T-07 KDM5B-PVT1 2 7 chr1:202748945:- chr8:127855155:+ . NA TCGA-E7-A541-01A-11R-A26T-07 INTS1-PRKAR1B 2 19 chr7:1485098:- chr7:697102:- . NA TCGA-E7-A541-01A-11R-A26T-07 NOS1AP-AHI1 3 7 chr1:162154476:+ chr6:135358187:- FRAMESHIFT NA TCGA-E7-A541-01A-11R-A26T-07 OSBPL9-CERS5 2 4 chr1:51714079:+ chr12:50144057:- FRAMESHIFT NA TCGA-E7-A541-01A-11R-A26T-07 ZNF322-KIF6 2 1 chr6:26658558:- chr6:39431161:- . NA TCGA-E7-A5KE-01A-11R-A28M-07 ATP5H-HN1 47 414 chr17:75042181:- chr17:75146684:- INFRAME NA TCGA-E7-A5KE-01A-11R-A28M-07 PLXNB1-HINT1 26 71 chr3:48409571:- chr5:131171733:- . NA TCGA-E7-A5KE-01A-11R-A28M-07 PPP6R2-SELENOO 23 77 chr22:50372150:+ chr22:50215717:+ . NA TCGA-E7-A5KE-01A-11R-A28M-07 CASC3-SIPA1L3 3 33 chr17:40141607:+ chr19:38206097:+ INFRAME NA TCGA-E7-A5KE-01A-11R-A28M-07 ACOX1-SRP68 4 24 chr17:75953451:- chr17:76050526:- FRAMESHIFT NA TCGA-E7-A5KE-01A-11R-A28M-07 RPAP3-HDAC7 2 19 chr12:47701464:- chr12:47802274:- FRAMESHIFT NA TCGA-E7-A5KE-01A-11R-A28M-07 LLGL2-EXOC7 3 7 chr17:75525825:+ chr17:76087720:- . NA TCGA-E7-A5KE-01A-11R-A28M-07 ZNF704-DLGAP1 1 12 chr8:80821374:- chr18:3582248:- FRAMESHIFT NA TCGA-E7-A5KE-01A-11R-A28M-07 EHF-APOPT1 1 11 chr11:34621228:+ chr14:103571623:+ . NA TCGA-E7-A5KE-01A-11R-A28M-07 ANK3-RHOBTB1 1 6 chr10:60733263:- chr10:60892995:- FRAMESHIFT NA TCGA-E7-A5KE-01A-11R-A28M-07 PDLIM7-FAM193B 1 5 chr5:177491807:- chr5:177539147:- FRAMESHIFT NA TCGA-E7-A5KF-01A-11R-A28M-07 KMT5B-UNC93B1 3 40 chr11:68213477:- chr11:68003175:- . NA TCGA-E7-A677-01A-11R-A30C-07 ZMYM2-IFT88 1 15 chr13:20082130:+ chr13:20638332:+ FRAMESHIFT NA TCGA-E7-A6MD-01A-41R-A352-07 CDKN2A-CAPZB 100 358 chr9:21974678:- chr1:19345252:- INFRAME Likely Oncogenic NA TCGA-E7-A6MD-01A-41R-A352-07 EPB41L1-RBBP8 3 16 chr20:36178672:+ chr18:22911600:+ . NA TCGA-E7-A6ME-01A-22R-A32O-07 MFSD11-PRCD 2 12 chr17:76742273:+ chr17:76553109:+ . NA TCGA-E7-A7DV-01A-11R-A33J-07 TMEM123-CENPP 22 88 chr11:102448812:- chr9:92611314:+ FRAMESHIFT NA TCGA-E7-A7DV-01A-11R-A33J-07 RFTN1-TMEM40 22 48 chr3:16513442:- chr3:12749840:- . NA TCGA-E7-A7DV-01A-11R-A33J-07 FAM49B-MRPL13 5 24 chr8:129903312:- chr8:120443308:- . NA TCGA-E7-A7DV-01A-11R-A33J-07 B9D1-ALDH16A1 6 2 chr17:19360320:- chr19:49458486:+ INFRAME NA TCGA-E7-A7DV-01A-11R-A33J-07 WNK2-RECQL 1 13 chr9:93185610:+ chr12:21470346:- INFRAME NA TCGA-E7-A7DV-01A-11R-A33J-07 LCORL-CDKAL1 2 3 chr4:18021598:- chr6:20955419:+ INFRAME NA TCGA-E7-A7DV-01A-11R-A33J-07 NRIP1-C21orf91 2 2 chr21:15064745:- chr21:17793581:- . NA TCGA-E7-A7DV-01A-11R-A33J-07 ARID2-SPATS1 1 3 chr12:45893721:+ chr6:44368379:+ FRAMESHIFT Likely Oncogenic NA TCGA-E7-A7PW-01A-11R-A352-07 PCBP2-ITGB7 119 222 chr12:53471807:+ chr12:53191636:- FRAMESHIFT NA TCGA-E7-A85H-01A-11R-A352-07 DHRS2-IL25 229 1020 chr14:23639895:+ chr14:23375625:+ FRAMESHIFT NA TCGA-E7-A85H-01A-11R-A352-07 SCAMP4-DAZAP1 32 59 chr19:1905439:+ chr19:1417500:+ . NA TCGA-E7-A85H-01A-11R-A352-07 SUPT6H-SARM1 14 108 chr17:28676231:+ chr17:28403820:+ . NA TCGA-E7-A85H-01A-11R-A352-07 ADAT3-DAZAP1 32 14 chr19:1905439:+ chr19:1417500:+ . NA TCGA-E7-A85H-01A-11R-A352-07 AAAS-ATP5G2 10 34 chr12:53314298:- chr12:53633066:- . NA TCGA-E7-A85H-01A-11R-A352-07 PSPC1-ACTR8 12 25 chr13:19730239:- chr3:53880109:- INFRAME NA TCGA-E7-A85H-01A-11R-A352-07 TMEM41A-LIPH 7 34 chr3:185494623:- chr3:185507352:- . NA TCGA-E7-A85H-01A-11R-A352-07 ASH1L-ARHGEF2 2 38 chr1:155341936:- chr1:156003729:- . NA TCGA-E7-A85H-01A-11R-A352-07 NDUFAF6-INTS8 3 20 chr8:94958179:+ chr8:94873374:+ . NA TCGA-E7-A85H-01A-11R-A352-07 RAB27A-DYX1C1 4 13 chr15:55270165:- chr15:55439581:- . NA TCGA-E7-A85H-01A-11R-A352-07 PPME1-YIF1A 3 8 chr11:74204445:+ chr11:66287676:- INFRAME NA TCGA-E7-A85H-01A-11R-A352-07 UBE3C-FAF1 2 12 chr7:157225539:+ chr1:50596216:- FRAMESHIFT NA TCGA-E7-A85H-01A-11R-A352-07 DPP3-SPATA6 4 3 chr11:66493633:+ chr1:48453131:- INFRAME NA TCGA-E7-A85H-01A-11R-A352-07 CEP350-TOR1AIP1 2 6 chr1:180012075:+ chr1:179900126:+ INFRAME NA TCGA-E7-A85H-01A-11R-A352-07 NBN-RIPK2 2 3 chr8:89964410:- chr8:89784050:+ FRAMESHIFT NA TCGA-E7-A85H-01A-11R-A352-07 FRYL-NKAIN3 1 6 chr4:48780078:- chr8:62579539:+ . NA TCGA-E7-A85H-01A-11R-A352-07 ADGRL3-PGLYRP2 1 5 chr4:61813889:+ chr19:15479435:- FRAMESHIFT NA TCGA-E7-A85H-01A-11R-A352-07 ENSA-RPRD2 1 3 chr1:150627467:- chr1:150457288:+ INFRAME NA TCGA-E7-A97Q-01A-11R-A38B-07 PSMB3-KIAA1257 30 85 chr17:38753334:+ chr3:128910333:- FRAMESHIFT NA TCGA-FD-A3B3-01A-12R-A206-07 TBC1D15-NPIPB2 8 70 chr12:71897941:+ chr16:11929445:- FRAMESHIFT NA TCGA-FD-A3B3-01A-12R-A206-07 FAM49B-ZNF826P 12 47 chr8:129903312:- chr19:20341101:- . NA TCGA-FD-A3B3-01A-12R-A206-07 ASH2L-FAM110B 8 35 chr8:38110833:+ chr8:58197831:+ . NA TCGA-FD-A3B3-01A-12R-A206-07 GDI2-ZNF526 4 7 chr10:5813214:- chr19:42224215:+ . NA TCGA-FD-A3B3-01A-12R-A206-07 DHRS4-SCFD1 2 9 chr14:23953916:+ chr14:30633947:+ INFRAME NA TCGA-FD-A3B3-01A-12R-A206-07 ARID4A-L3HYPDH 2 6 chr14:58347878:+ chr14:59479351:- FRAMESHIFT NA TCGA-FD-A3B4-01A-12R-A206-07 LGALS8-RHBG 1 18 chr1:236526115:+ chr1:156374607:+ FRAMESHIFT NA TCGA-FD-A3B4-01A-12R-A206-07 ABLIM2-PPP2R2C 1 7 chr4:8077628:- chr4:6378572:- INFRAME NA TCGA-FD-A3B6-01A-21R-A20F-07 NACC1-CCDC74B 31 3 chr19:13118454:+ chr2:130143313:- . NA TCGA-FD-A3B6-01A-21R-A20F-07 TIMP3-SYN3 14 42 chr22:32802122:+ chr22:32629868:- . NA TCGA-FD-A3B6-01A-21R-A20F-07 ADORA2B-SYN3 9 26 chr17:15945583:+ chr22:32596736:- FRAMESHIFT NA TCGA-FD-A3B6-01A-21R-A20F-07 ABCA7-CIRBP 5 12 chr19:1049437:+ chr19:1264253:+ . NA TCGA-FD-A3B6-01A-21R-A20F-07 ADORA2B-TIMP3 5 7 chr17:15945583:+ chr22:32801769:+ . NA TCGA-FD-A3B6-01A-21R-A20F-07 MICU1-NRG3 1 8 chr10:72475100:- chr10:82358739:+ INFRAME NA TCGA-FD-A3B6-01A-21R-A20F-07 ATP2B1-SHCBP1 1 3 chr12:89655679:- chr16:46604461:- FRAMESHIFT NA TCGA-FD-A3B6-01A-21R-A20F-07 MYO18A-JAGN1 1 2 chr17:29165942:- chr3:9892915:+ FRAMESHIFT NA TCGA-FD-A3B7-01A-31R-A20F-07 SMARCA5-LRBA 6 15 chr4:143548140:+ chr4:150436864:- INFRAME NA TCGA-FD-A3B7-01A-31R-A20F-07 EGFR-GYG1 2 1 chr7:55019365:+ chr3:148994142:+ INFRAME Likely Oncogenic NA TCGA-FD-A3B7-01A-31R-A20F-07 LSM3-MRPL22 2 1 chr3:14184032:+ chr5:154956371:+ INFRAME NA TCGA-FD-A3B7-01A-31R-A20F-07 OTUD4-CHCHD2 1 2 chr4:145159503:- chr7:56104475:- INFRAME NA TCGA-FD-A3B8-01A-31R-A20F-07 ARIH2-RHOA 4 24 chr3:48922811:+ chr3:49375591:- . NA TCGA-FD-A3B8-01A-31R-A20F-07 KIF16B-RRBP1 1 3 chr20:16494291:- chr20:17660528:- . NA TCGA-FD-A3N5-01A-11R-A21D-07 MTSS1-TATDN1 18 67 chr8:124699526:- chr8:124488696:- FRAMESHIFT NA TCGA-FD-A3N6-01A-11R-A21D-07 ADCY9-TFAP4 1 10 chr16:4113750:- chr16:4260595:- INFRAME NA TCGA-FD-A3NA-01A-11R-A21D-07 PTPN6-P3H3 4 33 chr12:6957785:+ chr12:6839000:+ INFRAME NA TCGA-FD-A3NA-01A-11R-A21D-07 SCCPDH-CNST 6 20 chr1:246744125:+ chr1:246647139:+ FRAMESHIFT NA TCGA-FD-A3NA-01A-11R-A21D-07 KAT2A-STAT5B 2 10 chr17:42117035:- chr17:42202808:- FRAMESHIFT NA TCGA-FD-A3NA-01A-11R-A21D-07 BCAR3-EVI5 3 5 chr1:93571670:- chr1:92736627:- INFRAME NA TCGA-FD-A3NA-01A-11R-A21D-07 EIF2AK2-CEBPZ 1 11 chr2:37135484:- chr2:37201903:- FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 PRRC2C-NLRP8 27 139 chr1:171591204:+ chr19:55973652:+ . NA TCGA-FD-A3SJ-01A-12R-A22U-07 PPP2R5D-UBR2 8 84 chr6:42989688:+ chr6:42684794:+ FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 RHOA-CACNA2D2 7 38 chr3:49411820:- chr3:50394168:- . NA TCGA-FD-A3SJ-01A-12R-A22U-07 CASC15-MBOAT1 4 40 chr6:22020542:+ chr6:20152769:- . NA TCGA-FD-A3SJ-01A-12R-A22U-07 YIPF1-MRPL15 6 25 chr1:53883113:- chr8:54147382:+ FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 CMIP-BCO1 5 25 chr16:81445541:+ chr16:81245475:+ FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 HERC4-CDKAL1 4 19 chr10:68032778:- chr6:21000227:+ INFRAME NA TCGA-FD-A3SJ-01A-12R-A22U-07 TBC1D9B-C5orf60 1 22 chr5:179874902:- chr5:179641878:- . NA TCGA-FD-A3SJ-01A-12R-A22U-07 TSC22D2-FGF12 2 15 chr3:150411308:+ chr3:192170656:- INFRAME NA TCGA-FD-A3SJ-01A-12R-A22U-07 C1orf116-LIN9 1 14 chr1:207032579:- chr1:226250919:- . NA TCGA-FD-A3SJ-01A-12R-A22U-07 ACOXL-UNC5D 3 5 chr2:111092966:+ chr8:35549292:+ FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 POLA1-CXorf58 3 5 chrX:24930549:+ chrX:23910283:+ . NA TCGA-FD-A3SJ-01A-12R-A22U-07 ARHGEF7-KLF10 2 8 chr13:111244294:+ chr8:102652397:- FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 CHCHD6-PLXNA1 1 7 chr3:126704399:+ chr3:127029874:+ FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 KREMEN1-EMID1 1 6 chr22:29098953:+ chr22:29233379:+ INFRAME NA TCGA-FD-A3SJ-01A-12R-A22U-07 RAB7A-KBTBD12 1 4 chr3:128726359:+ chr3:127927764:+ . NA TCGA-FD-A3SJ-01A-12R-A22U-07 ADGRF3-IFT172 1 3 chr2:26345711:- chr2:27465882:- . NA TCGA-FD-A3SJ-01A-12R-A22U-07 FAM19A5-MAPK8IP2 1 3 chr22:48646746:+ chr22:50610212:+ FRAMESHIFT NA TCGA-FD-A3SJ-01A-12R-A22U-07 NME7-TIPRL 1 1 chr1:169323117:- chr1:168183902:+ INFRAME NA TCGA-FD-A3SL-01A-21R-A22U-07 IKZF3-MED24 13 30 chr17:39829387:- chr17:40019933:- INFRAME NA TCGA-FD-A3SM-01A-11R-A22U-07 ZNF638-C2orf78 5 20 chr2:71331865:+ chr2:73813477:+ . NA TCGA-FD-A3SM-01A-11R-A22U-07 ARHGAP45-CNN2 1 9 chr19:1078045:+ chr19:1036130:+ INFRAME NA TCGA-FD-A3SN-01A-12R-A22U-07 HID1-SUMO2 4 3 chr17:74972591:- chr17:75181188:- INFRAME NA TCGA-FD-A3SO-01A-11R-A22U-07 TGFB1-FXYD5 14 40 chr19:41332128:- chr19:35164156:+ FRAMESHIFT NA TCGA-FD-A3SO-01A-11R-A22U-07 TOMM40-PDZRN4 2 20 chr19:44894066:+ chr12:41506456:+ FRAMESHIFT NA TCGA-FD-A3SP-01A-31R-A22U-07 CFH-CRB1 7 24 chr1:196690239:+ chr1:197328422:+ INFRAME NA TCGA-FD-A3SP-01A-31R-A22U-07 RPL5-CCDC18 2 37 chr1:92834913:+ chr1:93192000:+ INFRAME NA TCGA-FD-A3SP-01A-31R-A22U-07 CCNY-ANK3 2 6 chr10:35337207:+ chr10:60114331:- FRAMESHIFT NA TCGA-FD-A3SP-01A-31R-A22U-07 DIP2C-GDI2 2 5 chr10:440871:- chr10:5800705:- FRAMESHIFT NA TCGA-FD-A3SQ-01A-21R-A22U-07 SGSM2-EPN2 22 69 chr17:2343620:+ chr17:19309885:+ INFRAME NA TCGA-FD-A3SR-01A-11R-A22U-07 RAPGEF2-OCIAD2 27 124 chr4:159314768:+ chr4:48904611:- . NA TCGA-FD-A3SR-01A-11R-A22U-07 INPP4A-MGAT4A 6 97 chr2:98533495:+ chr2:98625835:- FRAMESHIFT NA TCGA-FD-A3SR-01A-11R-A22U-07 POLR2E-ZNF420 8 34 chr19:1089472:- chr19:37127128:+ . NA TCGA-FD-A3SR-01A-11R-A22U-07 IKBKB-UNC5D 8 31 chr8:42272205:+ chr8:35549292:+ FRAMESHIFT NA TCGA-FD-A3SR-01A-11R-A22U-07 ZNF254-NANOS3 2 2 chr19:24046279:+ chr19:13880442:+ . NA TCGA-FD-A43N-01A-11R-A23W-07 BCR-PPIL2 10 28 chr22:23273774:+ chr22:21693816:+ FRAMESHIFT NA TCGA-FD-A43N-01A-11R-A23W-07 TUBB-U91328.19 3 44 chr6:30723028:+ chr6:25992847:+ . NA TCGA-FD-A43N-01A-11R-A23W-07 PLEKHA7-TRIM21 5 13 chr11:17013989:- chr11:4390458:- . NA TCGA-FD-A43N-01A-11R-A23W-07 C6orf136-AKR1C1 2 12 chr6:30649959:+ chr10:4965914:+ INFRAME NA TCGA-FD-A43N-01A-11R-A23W-07 NUP98-DNHD1 2 5 chr11:3753316:- chr11:6562982:+ FRAMESHIFT NA TCGA-FD-A43P-01A-31R-A23W-07 PSMD11-KRTAP2-1 22 64 chr17:32447046:+ chr17:41047296:- . NA TCGA-FD-A43P-01A-31R-A23W-07 GRK3-RHBDL3 7 54 chr22:25565153:+ chr17:32284659:+ FRAMESHIFT NA TCGA-FD-A43P-01A-31R-A23W-07 C6orf203-PDSS2 5 36 chr6:107040230:+ chr6:107154777:- FRAMESHIFT NA TCGA-FD-A43P-01A-31R-A23W-07 ZMYND11-CDH18 3 15 chr10:221356:+ chr5:20255505:- . NA TCGA-FD-A43P-01A-31R-A23W-07 FAM189A1-GABRG3 2 14 chr15:29196430:- chr15:27326809:+ INFRAME NA TCGA-FD-A43P-01A-31R-A23W-07 TLK2-THRA 4 4 chr17:62536337:+ chr17:40083835:+ INFRAME NA TCGA-FD-A43P-01A-31R-A23W-07 BCAS3-ZMYND8 2 4 chr17:61084564:+ chr20:47262428:- INFRAME NA TCGA-FD-A43P-01A-31R-A23W-07 TMEM99-FBXO47 1 4 chr17:40833199:+ chr17:38963051:- . NA TCGA-FD-A43X-01A-11R-A23W-07 WDR4-RUNX1 1 3 chr21:42850041:- chr21:35864467:- . Likely Oncogenic NA TCGA-FD-A43Y-01A-21R-A26T-07 SETBP1-NFYC 3 27 chr18:44869283:+ chr1:40738836:+ . NA TCGA-FD-A5BT-01A-11R-A26T-07 FNDC3B-EMP3 7 126 chr3:172251541:+ chr19:48329352:+ INFRAME NA TCGA-FD-A5BT-01A-11R-A26T-07 AP1B1-NIPSNAP1 1 7 chr22:29349218:- chr22:29558953:- FRAMESHIFT NA TCGA-FD-A5BV-01A-11R-A26T-07 SCUBE2-LDHC 5 36 chr11:9069370:- chr11:18429737:+ INFRAME NA TCGA-FD-A5BV-01A-11R-A26T-07 NDUFB9-NSMCE2 1 3 chr8:124547113:+ chr8:125357219:+ FRAMESHIFT NA TCGA-FD-A5BV-01A-11R-A26T-07 COPB1-SPON1 1 2 chr11:14483032:- chr11:14075345:+ FRAMESHIFT NA TCGA-FD-A5BX-01A-11R-A26T-07 APP-MMP9 1 3 chr21:25891722:- chr20:46014371:+ FRAMESHIFT NA TCGA-FD-A5BZ-01A-11R-A28M-07 REV1-LYG2 2 14 chr2:99462496:- chr2:99246820:- INFRAME NA TCGA-FD-A5BZ-01A-11R-A28M-07 REV1-LYG1 2 10 chr2:99462496:- chr2:99284820:- FRAMESHIFT NA TCGA-FD-A5C0-01A-11R-A28M-07 DIP2A-C16orf46 44 216 chr21:46484828:+ chr16:81054094:- FRAMESHIFT NA TCGA-FD-A62N-01A-11R-A30C-07 LIPA-TMEM132A 2 22 chr10:89245676:- chr11:60927204:+ INFRAME NA TCGA-FD-A62O-01A-11R-A30C-07 BAG4-WRN 11 66 chr8:38192795:+ chr8:31154624:+ INFRAME NA TCGA-FD-A62P-01A-32R-A30C-07 HMGCS1-UNC13A 3 20 chr5:43292848:- chr19:17646111:- INFRAME NA TCGA-FD-A62P-01A-32R-A30C-07 ATP6AP1-OPN1LW 2 16 chrX:154429174:+ chrX:154156294:+ INFRAME NA TCGA-FD-A62P-01A-32R-A30C-07 HSP90AB1-MRPL14 2 6 chr6:44247195:+ chr6:44116629:- . NA TCGA-FD-A62S-01A-11R-A30C-07 PPP6R3-CSN1S2AP 25 73 chr11:68460827:+ chr4:70078754:+ . NA TCGA-FD-A62S-01A-11R-A30C-07 ZMPSTE24-SMAP2 7 35 chr1:40272035:+ chr1:40406736:+ INFRAME NA TCGA-FD-A62S-01A-11R-A30C-07 RAB30-DPP3 3 20 chr11:83071691:- chr11:66504612:+ . NA TCGA-FD-A62S-01A-11R-A30C-07 TENM4-DPP3 1 6 chr11:79440509:- chr11:66509079:+ . NA TCGA-FD-A6TA-01A-12R-A33J-07 COBLL1-SCN3A 7 24 chr2:164841156:- chr2:165170548:- FRAMESHIFT NA TCGA-FD-A6TA-01A-12R-A33J-07 CHD9-ERVK3-1 7 10 chr16:53055077:+ chr19:58306088:+ . NA TCGA-FD-A6TB-01A-12R-A33J-07 GAS2L3-MED13L 5 35 chr12:100601753:+ chr12:115966243:- INFRAME NA TCGA-FD-A6TC-01A-21R-A33J-07 CCDC9-NUP62 14 38 chr19:47266792:+ chr19:49909884:- . NA TCGA-FD-A6TC-01A-21R-A33J-07 CES2-SLC9A5 6 22 chr16:66934884:+ chr16:67270784:+ . NA TCGA-FD-A6TC-01A-21R-A33J-07 CES2-PLEKHG4 5 18 chr16:66934621:+ chr16:67277594:+ . NA TCGA-FD-A6TC-01A-21R-A33J-07 CDC42BPA-WWOX 6 6 chr1:227317005:- chr16:79211608:+ INFRAME NA TCGA-FD-A6TC-01A-21R-A33J-07 OVOL2-CBLN4 1 10 chr20:18041534:- chr20:55998754:- FRAMESHIFT NA TCGA-FD-A6TC-01A-21R-A33J-07 ANO2-BICD1 3 1 chr12:5921040:- chr12:32293994:+ INFRAME NA TCGA-FD-A6TD-01A-51R-A33J-07 TRAF7-MAPK8IP3 38 51 chr16:2164001:+ chr16:1766904:+ FRAMESHIFT NA TCGA-FD-A6TD-01A-51R-A33J-07 PDE3B-MICAL2 1 5 chr11:14645053:+ chr11:12162079:+ . NA TCGA-FD-A6TD-01A-51R-A33J-07 MICAL2-RRAS2 1 4 chr11:12239585:+ chr11:14295855:- INFRAME NA TCGA-FD-A6TE-01A-12R-A33J-07 GAK-SPON2 4 16 chr4:859606:- chr4:1179541:- . NA TCGA-FD-A6TF-01A-52R-A32O-07 ZDHHC20-KCNK1 1 1 chr13:21391722:- chr1:233666595:+ INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 TLK2-IRAK3 21 33 chr17:62602180:+ chr12:66226723:+ INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 SPINT2-GRIP1 6 62 chr19:38290575:+ chr12:66541950:- INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 ZNHIT3-WDR60 8 47 chr17:36486966:+ chr7:158922377:+ INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 DLG1-MYO9B 7 25 chr3:197194425:- chr19:17191097:+ INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 OSBPL9-AGBL4 5 21 chr1:51652041:+ chr1:48590985:- INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 ZNF148-RPRD2 6 14 chr3:125331158:- chr1:150457288:+ . NA TCGA-FD-A6TG-01A-11R-A32O-07 ANKRD28-GRM7 4 20 chr3:15859377:- chr3:7740357:+ FRAMESHIFT NA TCGA-FD-A6TG-01A-11R-A32O-07 MICE-FARS2 4 18 chr6:29748900:- chr6:5545180:+ . NA TCGA-FD-A6TG-01A-11R-A32O-07 ARPC3-TYROBP 1 26 chr12:110450255:- chr19:35907580:- INFRAME NA TCGA-FD-A6TG-01A-11R-A32O-07 NQO1-SEC31A 3 15 chr16:69726433:- chr4:82900223:- . NA TCGA-FD-A6TG-01A-11R-A32O-07 FKRP-XPOT 2 3 chr19:46748088:+ chr12:64416698:+ . NA TCGA-FD-A6TG-01A-11R-A32O-07 SNX13-GLCCI1 2 3 chr7:17940284:- chr7:8003908:+ FRAMESHIFT NA TCGA-FD-A6TG-01A-11R-A32O-07 LPP-RNF168 1 3 chr3:188609844:+ chr3:196475312:- FRAMESHIFT NA TCGA-FD-A6TH-01A-11R-A32O-07 STARD3-ABR 4 11 chr17:39637231:+ chr17:1070090:- . NA TCGA-FD-A6TH-01A-11R-A32O-07 METRNL-DYNLL2 2 10 chr17:83085323:+ chr17:58087082:+ . NA TCGA-FD-A6TH-01A-11R-A32O-07 LLGL2-AP2B1 2 9 chr17:75573631:+ chr17:35709224:+ FRAMESHIFT NA TCGA-FD-A6TI-01A-11R-A32O-07 ARID1B-SMOC2 1 9 chr6:156829421:+ chr6:168650681:+ FRAMESHIFT Likely Oncogenic NA TCGA-FD-A6TK-01A-42R-A33J-07 MIRLET7BHG-HKDC1 6 44 chr22:46098558:+ chr10:69265585:+ . NA TCGA-FD-A6TK-01A-42R-A33J-07 RFT1-NEK4 1 12 chr3:53130338:- chr3:52741499:- INFRAME NA TCGA-FD-A6TK-01A-42R-A33J-07 RELB-PPP1R37 1 7 chr19:45002996:+ chr19:45138514:+ INFRAME NA TCGA-FD-A6TK-01A-42R-A33J-07 MTERF3-FNTA 1 2 chr8:96256962:- chr8:43077216:+ FRAMESHIFT NA TCGA-FJ-A3Z7-01A-12R-A23N-07 PAPPA2-RPS19 12 58 chr1:176671115:+ chr19:41869031:+ INFRAME NA TCGA-FJ-A3Z7-01A-12R-A23N-07 MIR611-SCGB1D2 8 7 chr11:61792556:- chr11:62243289:+ . NA TCGA-FJ-A3Z7-01A-12R-A23N-07 SRSF4-CREB5 5 19 chr1:29181646:- chr7:28804199:+ FRAMESHIFT NA TCGA-FJ-A3Z7-01A-12R-A23N-07 TMEM258-SCGB1D2 8 7 chr11:61792556:- chr11:62243289:+ FRAMESHIFT NA TCGA-FJ-A3Z7-01A-12R-A23N-07 NIPBL-SPEF2 1 4 chr5:36877178:+ chr5:35659019:+ . NA TCGA-FJ-A3Z7-01A-12R-A23N-07 TNRC6B-TPST2 1 3 chr22:40251200:+ chr22:26544675:- . NA TCGA-FJ-A3ZE-01A-11R-A23N-07 ACACA-HTRA4 81 248 chr17:37330173:- chr8:38987936:+ INFRAME NA TCGA-FJ-A3ZE-01A-11R-A23N-07 MIB1-CABYR 14 29 chr18:21804014:+ chr18:24155701:+ FRAMESHIFT NA TCGA-FJ-A3ZE-01A-11R-A23N-07 ACACA-ADAM9 2 9 chr17:37330173:- chr8:39007886:+ FRAMESHIFT NA TCGA-FJ-A3ZE-01A-11R-A23N-07 TMEM63A-FCGR2A 2 4 chr1:225871987:- chr1:161517975:+ INFRAME NA TCGA-FJ-A3ZE-01A-11R-A23N-07 POLR1D-SMYD2 2 2 chr13:27648453:+ chr1:214336704:+ FRAMESHIFT NA TCGA-FJ-A3ZE-01A-11R-A23N-07 DNMT1-ADGRE1 1 4 chr19:10155853:- chr19:6890481:+ INFRAME NA TCGA-FJ-A3ZF-01A-11R-A23N-07 UNC13D-ACOX1 14 84 chr17:75835409:- chr17:75943213:- . NA TCGA-FJ-A3ZF-01A-11R-A23N-07 ZNF613-SIGLEC7 7 36 chr19:51929896:+ chr19:51153063:+ . NA TCGA-FJ-A3ZF-01A-11R-A23N-07 TSTD1-GBAP1 4 21 chr1:161038880:- chr1:155217373:- . NA TCGA-FJ-A3ZF-01A-11R-A23N-07 TUBGCP4-TMEM62 5 10 chr15:43386330:+ chr15:43160681:+ INFRAME NA TCGA-FJ-A3ZF-01A-11R-A23N-07 FNIP1-IL5 1 6 chr5:131796830:- chr5:132543126:- FRAMESHIFT NA TCGA-FJ-A871-01A-11R-A352-07 MTAP-LINGO2 25 117 chr9:21838010:+ chr9:28080978:- . NA TCGA-FT-A3EE-01A-11R-A206-07 RAB11FIP1-KCNU1 28 108 chr8:37899071:- chr8:36905708:+ INFRAME NA TCGA-FT-A3EE-01A-11R-A206-07 ADGRA2-GSR 6 39 chr8:37834128:+ chr8:30712088:- INFRAME NA TCGA-G2-A2EF-01A-12R-A18C-07 LAP3-DDX1 163 314 chr4:17581814:+ chr2:15606150:+ INFRAME NA TCGA-G2-A2EF-01A-12R-A18C-07 SEC24C-ADK 120 113 chr10:73744437:+ chr10:74670183:+ . NA TCGA-G2-A2EF-01A-12R-A18C-07 CDK6-HEPACAM2 45 185 chr7:92774696:- chr7:93192363:- INFRAME NA TCGA-G2-A2EF-01A-12R-A18C-07 SPRED2-RAB1A 21 46 chr2:65431962:- chr2:65104806:- INFRAME NA TCGA-G2-A2EF-01A-12R-A18C-07 ALG5-WBSCR17 11 64 chr13:36985627:- chr7:71710761:+ INFRAME NA TCGA-G2-A2EF-01A-12R-A18C-07 TBC1D20-C20orf96 10 43 chr20:462336:- chr20:289676:- FRAMESHIFT NA TCGA-G2-A2EF-01A-12R-A18C-07 DALRD3-PRKAR2A 4 12 chr3:49016774:- chr3:48752317:- INFRAME NA TCGA-G2-A2EF-01A-12R-A18C-07 TXNL1-LRP1B 4 6 chr18:56638343:- chr2:140541971:- INFRAME NA TCGA-G2-A2EL-01A-12R-A18C-07 GIGYF2-MROH2A 6 21 chr2:232735238:+ chr2:233810794:+ FRAMESHIFT NA TCGA-G2-A2EO-01A-11R-A180-07 WDR74-SNHG1 35 128 chr11:62835431:- chr11:62852839:- . NA TCGA-G2-A2EO-01A-11R-A180-07 ASAP1-MRPL13 20 116 chr8:130214556:- chr8:120381174:- . NA TCGA-G2-A2EO-01A-11R-A180-07 EXT1-WDYHV1 15 32 chr8:118110085:- chr8:123427924:+ INFRAME NA TCGA-G2-A2EO-01A-11R-A180-07 LCLAT1-MYADML 2 16 chr2:30447383:+ chr2:33723513:- . NA TCGA-G2-A2EO-01A-11R-A180-07 CD44-CREBZF 2 1 chr11:35190065:+ chr11:85660597:- INFRAME NA TCGA-G2-A2ES-01A-11R-A180-07 NOL12-LGALS1 201 783 chr22:37688992:+ chr22:37676986:+ INFRAME NA TCGA-G2-A2ES-01A-11R-A180-07 EPB41-GMEB1 1 11 chr1:28887210:+ chr1:28690104:+ . NA TCGA-G2-A3IB-01A-11R-A20F-07 CMAS-GAS5 4 24 chr12:22062434:+ chr1:173864304:- . NA TCGA-G2-A3IB-01A-11R-A20F-07 NSL1-STIP1 1 8 chr1:212791530:- chr11:64193078:+ INFRAME NA TCGA-G2-A3IB-01A-11R-A20F-07 STIP1-NSL1 2 4 chr11:64186270:+ chr1:212784493:- FRAMESHIFT NA TCGA-G2-A3IE-01A-11R-A20F-07 KLHL42-MRPS35 14 49 chr12:27781202:+ chr12:27755181:+ INFRAME NA TCGA-G2-A3IE-01A-11R-A20F-07 WARS2-OXR1 4 1 chr1:119140555:- chr8:106359476:+ . NA TCGA-G2-A3IE-01A-11R-A20F-07 CCDC14-HADHB 2 1 chr3:123933673:- chr2:26279994:+ INFRAME NA TCGA-G2-A3VY-01A-11R-A22U-07 ARID4B-NTPCR 13 89 chr1:235246420:- chr1:232978163:+ FRAMESHIFT NA TCGA-G2-A3VY-01A-11R-A22U-07 SCHLAP1-SLC51B 10 54 chr2:180724690:+ chr15:65049897:+ . NA TCGA-G2-A3VY-01A-11R-A22U-07 WDR70-CACNA2D4 3 16 chr5:37516590:+ chr12:1909965:- FRAMESHIFT NA TCGA-G2-A3VY-01A-11R-A22U-07 NUP133-CDH6 3 13 chr1:229489955:- chr5:31299464:+ FRAMESHIFT NA TCGA-G2-A3VY-01A-11R-A22U-07 UCK2-DARS2 4 7 chr1:165827932:+ chr1:173826687:+ FRAMESHIFT NA TCGA-G2-A3VY-01A-11R-A22U-07 WDSUB1-GPD2 2 10 chr2:159248372:- chr2:156476098:+ . NA TCGA-G2-A3VY-01A-11R-A22U-07 BAD-MACROD1 2 2 chr11:64284182:- chr11:64152393:- INFRAME NA TCGA-G2-A3VY-01A-11R-A22U-07 MPZL1-RCSD1 1 5 chr1:167722242:+ chr1:167704664:+ FRAMESHIFT NA TCGA-G2-A3VY-01A-11R-A22U-07 ZNF844-CMSS1 1 5 chr19:12074157:+ chr3:100146973:+ INFRAME NA TCGA-G2-A3VY-01A-11R-A22U-07 E2F8-CSRP3 1000 1000 chr11:19240107:- chr11:19202039:- . NA TCGA-G2-AA3B-01A-11R-A39I-07 MKRN2-FANCD2P2 5 39 chr3:12575006:+ chr3:11881588:+ . NA TCGA-G2-AA3B-01A-11R-A39I-07 ZMAT5-ASCC2 4 15 chr22:29766949:- chr22:29793676:- . NA TCGA-G2-AA3B-01A-11R-A39I-07 CPNE1-ASIP 3 15 chr20:35626221:- chr20:34260367:+ . NA TCGA-G2-AA3B-01A-11R-A39I-07 FLNB-RHBDF1 2 15 chr3:58008856:+ chr16:65039:- . NA TCGA-G2-AA3B-01A-11R-A39I-07 NRDE2-CATSPERB 3 9 chr14:90331841:- chr14:91625007:- FRAMESHIFT NA TCGA-G2-AA3B-01A-11R-A39I-07 ESCO1-CPNE1 3 6 chr18:21600623:- chr20:35632923:- . NA TCGA-G2-AA3B-01A-11R-A39I-07 TANC1-MARCH7 2 3 chr2:159097834:+ chr2:159759226:+ INFRAME NA TCGA-G2-AA3D-01A-11R-A39I-07 DLEU2-MED4 6 19 chr13:50125302:- chr13:48090418:- . NA TCGA-G2-AA3D-01A-11R-A39I-07 NDC80-PPP4R1 5 22 chr18:2579029:+ chr18:9562075:- INFRAME NA TCGA-G2-AA3D-01A-11R-A39I-07 H6PD-CA6 3 10 chr1:9247083:+ chr1:8967659:+ INFRAME NA TCGA-G2-AA3D-01A-11R-A39I-07 CCNL2-MRPL20 3 9 chr1:1398233:- chr1:1402256:- INFRAME NA TCGA-G2-AA3D-01A-11R-A39I-07 CLMN-WDR20 2 6 chr14:95319711:- chr14:102222830:+ FRAMESHIFT NA TCGA-G2-AA3D-01A-11R-A39I-07 PDXDC2P-CDC42BPG 1 8 chr16:70010751:- chr11:64832959:- . NA TCGA-G2-AA3D-01A-11R-A39I-07 SIN3A-OCA2 1 6 chr15:75451423:- chr15:27966822:- . NA TCGA-G2-AA3D-01A-11R-A39I-07 KLC3-CLPTM1 1 5 chr19:45350747:+ chr19:44973087:+ INFRAME NA TCGA-G2-AA3F-01A-12R-A42T-07 ACOXL-KLHL23 37 170 chr2:110768464:+ chr2:169741385:+ FRAMESHIFT NA TCGA-G2-AA3F-01A-12R-A42T-07 GOLGA4-RRM1 23 63 chr3:37251484:+ chr11:4129074:+ INFRAME NA TCGA-G2-AA3F-01A-12R-A42T-07 RARRES1-RSRC1 3 98 chr3:158713797:- chr3:158354857:+ INFRAME NA TCGA-G2-AA3F-01A-12R-A42T-07 UXS1-C2orf40 10 56 chr2:106129674:- chr2:106071844:+ INFRAME NA TCGA-G2-AA3F-01A-12R-A42T-07 DMXL1-ARHGAP15 5 32 chr5:119071656:+ chr2:143435601:+ INFRAME NA TCGA-G2-AA3F-01A-12R-A42T-07 PKP2-MAP3K20 4 6 chr12:32868927:- chr2:173203796:+ INFRAME NA TCGA-G2-AA3F-01A-12R-A42T-07 LIMS1-CIAO1 1 14 chr2:108534594:+ chr2:96267321:+ FRAMESHIFT NA TCGA-G2-AA3F-01A-12R-A42T-07 ACOXL-SSB 1 12 chr2:110732774:+ chr2:169800952:+ . NA TCGA-G2-AA3F-01A-12R-A42T-07 GFM1-TMCC1 1 3 chr3:158682157:+ chr3:129671264:- INFRAME NA TCGA-GC-A3RB-01A-12R-A220-07 CDC5L-TMEM63B 19 58 chr6:44408632:+ chr6:44134561:+ . NA TCGA-GC-A3RB-01A-12R-A220-07 OSBPL2-CDH4 21 15 chr20:62238597:+ chr20:61910422:+ . NA TCGA-GC-A3RB-01A-12R-A220-07 PTGES2-MLXIP 12 41 chr9:128122362:- chr12:122141691:+ FRAMESHIFT NA TCGA-GC-A3RB-01A-12R-A220-07 WDR37-TUBAL3 5 42 chr10:1086357:+ chr10:5401087:- FRAMESHIFT NA TCGA-GC-A3RB-01A-12R-A220-07 PCCA-CLYBL 8 17 chr13:100268783:+ chr13:99891318:+ FRAMESHIFT NA TCGA-GC-A3RB-01A-12R-A220-07 CYP4F3-DSCR4-IT1 3 11 chr19:15641613:+ chr21:38006826:- . NA TCGA-GC-A3RB-01A-12R-A220-07 SDK1-SLC29A4 2 14 chr7:4178586:+ chr7:5302797:+ INFRAME NA TCGA-GC-A3RB-01A-12R-A220-07 USP12-E2F3 4 5 chr13:27089883:- chr6:20479846:+ FRAMESHIFT NA TCGA-GC-A3RB-01A-12R-A220-07 ATAD5-PTP4A1 2 10 chr17:30860612:+ chr6:63576436:+ FRAMESHIFT NA TCGA-GC-A3RB-01A-12R-A220-07 MMP15-CDH5 3 5 chr16:58026512:+ chr16:66379319:+ . NA TCGA-GC-A3RB-01A-12R-A220-07 L3MBTL3-WDR37 1 4 chr6:130022305:+ chr10:1072116:+ . NA TCGA-GC-A3RB-01A-12R-A220-07 QSER1-PRRG4 1 4 chr11:32893334:+ chr11:32853296:+ . NA TCGA-GC-A3RC-01A-11R-A22U-07 DHRS12-RASL11A 15 24 chr13:51799534:- chr13:27271484:+ INFRAME NA TCGA-GC-A3RC-01A-11R-A22U-07 QRICH1-PRKAR2A 7 19 chr3:49044390:- chr3:48807684:- INFRAME NA TCGA-GC-A3RC-01A-11R-A22U-07 RASL11A-DHRS12 1 6 chr13:27271068:+ chr13:51791257:- FRAMESHIFT NA TCGA-GC-A3RC-01A-11R-A22U-07 RNF4-GATAD2A 1 4 chr4:2513797:+ chr19:19436131:+ . NA TCGA-GC-A3RD-01A-12R-A22U-07 DRAM1-NUP107 96 504 chr12:101897930:+ chr12:68741813:+ FRAMESHIFT NA TCGA-GC-A3RD-01A-12R-A22U-07 FRS2-DRAM1 94 231 chr12:69532056:+ chr12:101897863:+ . NA TCGA-GC-A3RD-01A-12R-A22U-07 MGA-CDKN2A 17 49 chr15:41713496:+ chr9:21968242:- INFRAME Likely Oncogenic NA TCGA-GC-A3RD-01A-12R-A22U-07 IRAK1-MECP2 8 80 chrX:154018006:- chrX:154032557:- FRAMESHIFT NA TCGA-GC-A3RD-01A-12R-A22U-07 GDPD1-SMG8 6 28 chr17:59220751:+ chr17:59214805:+ INFRAME NA TCGA-GC-A3RD-01A-12R-A22U-07 PTPRR-CHPT1 7 23 chr12:70892679:- chr12:101716728:+ FRAMESHIFT NA TCGA-GC-A3RD-01A-12R-A22U-07 FRS2-PTPRR 1 28 chr12:69532056:+ chr12:70892977:- . NA TCGA-GC-A3RD-01A-12R-A22U-07 HDAC1-PEPD 2 10 chr1:32327677:+ chr19:33413643:- FRAMESHIFT NA TCGA-GC-A3RD-01A-12R-A22U-07 GNPTAB-CNOT2 2 9 chr12:101780152:- chr12:70310895:+ INFRAME NA TCGA-GC-A3RD-01A-12R-A22U-07 CDKN2A-MGA 2 4 chr9:21970902:- chr15:41727180:+ INFRAME Likely Oncogenic NA TCGA-GC-A3RD-01A-12R-A22U-07 FCGRT-RPL13A 1 1 chr19:49514486:+ chr19:49490779:+ INFRAME NA TCGA-GC-A3YS-01A-11R-A23N-07 NFAT5-CHST4 8 18 chr16:69566374:+ chr16:71536660:+ . NA TCGA-GC-A3YS-01A-11R-A23N-07 KRBA2-YBX2 1 7 chr17:8375900:- chr17:7293538:- . NA TCGA-GC-A3YS-01A-11R-A23N-07 MIPOL1-NLGN1 1 4 chr14:37308519:+ chr3:174275315:+ FRAMESHIFT NA TCGA-GC-A3YS-01A-11R-A23N-07 FTO-TMEM231 1 3 chr16:53704229:+ chr16:75555973:- FRAMESHIFT NA TCGA-GC-A3YS-01A-11R-A23N-07 HIPK2-TMEM130 1000 1000 chr7:139620401:- chr7:98863400:- FRAMESHIFT NA TCGA-GC-A4ZW-01A-11R-A26T-07 STAG2-RGAG1 9 391 chrX:123961856:+ chrX:110450567:+ . Likely Oncogenic NA TCGA-GC-A4ZW-01A-11R-A26T-07 GAS2L1-SMTN 24 137 chr22:29308738:+ chr22:31104316:+ FRAMESHIFT NA TCGA-GC-A4ZW-01A-11R-A26T-07 GULP1-BOLL 7 25 chr2:188292166:+ chr2:197743159:- . NA TCGA-GC-A4ZW-01A-11R-A26T-07 SHPRH-RCL1 6 17 chr6:145952349:- chr9:4860125:+ FRAMESHIFT NA TCGA-GC-A4ZW-01A-11R-A26T-07 KIAA0430-EEF2K 3 17 chr16:15600428:- chr16:22280198:+ INFRAME NA TCGA-GC-A4ZW-01A-11R-A26T-07 ERI2-TMEM159 1 14 chr16:20896308:- chr16:21161085:+ . NA TCGA-GC-A4ZW-01A-11R-A26T-07 RSL1D1-CCP110 3 3 chr16:11847668:- chr16:19527867:+ . NA TCGA-GC-A4ZW-01A-11R-A26T-07 FDFT1-TNKS 2 5 chr8:11802931:+ chr8:9704663:+ INFRAME NA TCGA-GC-A4ZW-01A-11R-A26T-07 RCL1-CDC37L1 2 4 chr9:4860901:+ chr9:4706011:+ . NA TCGA-GC-A4ZW-01A-11R-A26T-07 STAG2-AMMECR1 1 2 chrX:123960866:+ chrX:110264599:- . Likely Oncogenic NA TCGA-GC-A6I1-01A-12R-A31N-07 PSMD13-HSD17B12 4 13 chr11:237144:+ chr11:43798320:+ FRAMESHIFT NA TCGA-GC-A6I3-01A-11R-A31N-07 EGFR-GRB10 2 4 chr7:55019365:+ chr7:50674658:- INFRAME Likely Oncogenic NA TCGA-GD-A2C5-01A-12R-A180-07 SHPRH-NDUFS5 110 575 chr6:145964157:- chr1:39028723:+ . NA TCGA-GD-A2C5-01A-12R-A180-07 NEDD4-GABRA5 4 13 chr15:55993511:- chr15:26868729:+ . NA TCGA-GD-A2C5-01A-12R-A180-07 GGNBP2-ZMAT4 2 17 chr17:36557336:+ chr8:40697401:- FRAMESHIFT NA TCGA-GD-A3OP-01A-21R-A220-07 C2CD2-APP 4 18 chr21:41905724:- chr21:26000182:- INFRAME NA TCGA-GD-A3OS-01A-12R-A220-07 COL5A1-PTGES2 53 208 chr9:134786048:+ chr9:128125441:- INFRAME NA TCGA-GD-A3OS-01A-12R-A220-07 YAP1-CNTN5 25 97 chr11:102114394:+ chr11:99049591:+ . Likely Oncogenic NA TCGA-GD-A3OS-01A-12R-A220-07 TRUB2-KCNT1 18 54 chr9:128321599:- chr9:135750098:+ FRAMESHIFT NA TCGA-GD-A3OS-01A-12R-A220-07 YAP1-MYEOV 11 78 chr11:102114394:+ chr11:69341510:+ . Likely Oncogenic NA TCGA-GD-A3OS-01A-12R-A220-07 STAM2-NOSTRIN 12 52 chr2:152175603:- chr2:168831472:+ FRAMESHIFT NA TCGA-GD-A3OS-01A-12R-A220-07 TMEM127-STAM 8 65 chr2:96265869:- chr10:17684675:+ . NA TCGA-GD-A3OS-01A-12R-A220-07 SH2D6-NCOA2 11 29 chr2:85422690:+ chr8:70170379:- . NA TCGA-GD-A3OS-01A-12R-A220-07 PDGFD-DCUN1D5 10 26 chr11:104163804:- chr11:103062414:- INFRAME NA TCGA-GD-A3OS-01A-12R-A220-07 PGR-FLJ42102 4 40 chr11:101091760:- chr11:71393958:- . NA TCGA-GD-A3OS-01A-12R-A220-07 TRIM28-CHMP2A 4 12 chr19:58550284:+ chr19:58552438:- INFRAME NA TCGA-GD-A3OS-01A-12R-A220-07 PLXDC2-VAMP5 3 12 chr10:19817191:+ chr2:85591725:+ FRAMESHIFT NA TCGA-GD-A3OS-01A-12R-A220-07 PDZRN4-WTAPP1 1 17 chr12:41191544:+ chr11:102798024:+ . NA TCGA-GD-A3OS-01A-12R-A220-07 PLXDC2-VAMP8 1 10 chr10:19817191:+ chr2:85579009:+ FRAMESHIFT NA TCGA-GD-A3OS-01A-12R-A220-07 CIAO1-SH2D6 1 9 chr2:96267469:+ chr2:85422203:+ . NA TCGA-GU-A42P-01A-11R-A23W-07 YES1-SCFD2 10 75 chr18:812114:- chr4:52920870:- . NA TCGA-GU-A42Q-01A-11R-A23W-07 PIR-TMEM27 11 41 chrX:15491162:- chrX:15664395:- FRAMESHIFT NA TCGA-GU-A42Q-01A-11R-A23W-07 TECR-ICAM3 5 30 chr19:14529711:+ chr19:10338948:- FRAMESHIFT NA TCGA-GU-A42Q-01A-11R-A23W-07 ZNF808-MISP 5 13 chr19:52527711:+ chr19:756890:+ . NA TCGA-GU-A42Q-01A-11R-A23W-07 ATF2-SOS2 3 14 chr2:175111568:- chr14:50174552:- INFRAME NA TCGA-GU-A42Q-01A-11R-A23W-07 BMP7-MACROD2 4 10 chr20:57202475:- chr20:15431405:+ FRAMESHIFT NA TCGA-GU-A42Q-01A-11R-A23W-07 STN1-PCGF3 2 9 chr10:103905091:- chr4:761279:+ FRAMESHIFT NA TCGA-GU-A42R-01A-11R-A23N-07 CREBBP-CASKIN1 16 62 chr16:3744894:- chr16:2190358:- INFRAME Likely Oncogenic NA TCGA-GU-A42R-01A-11R-A23N-07 MED12L-PABPC1L 1 2 chr3:151430380:+ chr20:44939126:+ FRAMESHIFT NA TCGA-GU-A762-01A-11R-A33J-07 TRAF2-CCDC183 1 2 chr9:136882710:+ chr9:136806504:+ . NA TCGA-GU-A764-01A-11R-A352-07 E2F3-MYL4 19 113 chr6:20403832:+ chr17:47209389:+ . NA TCGA-GU-A764-01A-11R-A352-07 SIPA1L3-GPI 18 74 chr19:38029156:+ chr19:34393248:+ . NA TCGA-GU-A764-01A-11R-A352-07 UCK2-MRPL9 1 22 chr1:165827932:+ chr1:151762500:- INFRAME NA TCGA-GU-A764-01A-11R-A352-07 PARP14-DIRC2 3 10 chr3:122720388:+ chr3:122879263:+ FRAMESHIFT NA TCGA-GU-A764-01A-11R-A352-07 UCK2-TDRKH 1 14 chr1:165827932:+ chr1:151775166:- INFRAME NA TCGA-GU-A764-01A-11R-A352-07 SLC35E2B-PFKFB4 2 7 chr1:1669664:- chr3:48525669:- INFRAME NA TCGA-GU-A764-01A-11R-A352-07 CC2D1A-RRBP1 1 6 chr19:13923811:+ chr20:17680075:- . NA TCGA-GU-A766-01A-11R-A32O-07 RHBDD2-EGFR 4 11 chr7:75883848:+ chr7:55043833:+ . Likely Oncogenic NA TCGA-GU-A766-01A-11R-A32O-07 RHOA-DCAF1 1 3 chr3:49411820:- chr3:51433264:- . NA TCGA-GU-A767-01A-11R-A32O-07 PEX5-PRB1 63 30 chr12:7199113:+ chr12:11351929:- . NA TCGA-GU-A767-01A-11R-A32O-07 PEX5-PRB2 28 170 chr12:7199113:+ chr12:11391648:- . NA TCGA-GU-A767-01A-11R-A32O-07 PIKFYVE-MLPH 10 43 chr2:208320359:+ chr2:237542567:+ INFRAME NA TCGA-GU-A767-01A-11R-A32O-07 TBC1D8-LIPF 5 49 chr2:101050401:- chr10:88678445:+ FRAMESHIFT NA TCGA-GU-A767-01A-11R-A32O-07 MBNL2-PLAC8 4 28 chr13:97222531:+ chr4:83105020:- . NA TCGA-GU-A767-01A-11R-A32O-07 KPNA3-SPRYD7 2 7 chr13:49792438:- chr13:49921580:- INFRAME NA TCGA-GU-A767-01A-11R-A32O-07 OPHN1-TNMD 1 7 chrX:68274738:- chrX:100593895:+ INFRAME NA TCGA-GU-A767-01A-11R-A32O-07 FRRS1-PALMD 2 1 chr1:99740793:- chr1:99662319:+ INFRAME NA TCGA-GU-A767-01A-11R-A32O-07 YIPF6-NUGGC 1 4 chrX:68499123:+ chr8:28047612:- INFRAME NA TCGA-GU-AATO-01A-11R-A39I-07 BIRC6-MYCNOS 4 21 chr2:32549481:+ chr2:15941097:- . NA TCGA-GU-AATP-01A-11R-A39I-07 SETD5-RAD18 3 3 chr3:9448630:+ chr3:8963593:- . NA TCGA-GU-AATP-01A-11R-A39I-07 THOC5-PIBF1 1 4 chr22:29520998:- chr13:72931165:+ INFRAME NA TCGA-GV-A3JV-01A-11R-A220-07 IQSEC1-WNT7A 100 703 chr3:12913428:- chr3:13875173:- FRAMESHIFT NA TCGA-GV-A3JV-01A-11R-A220-07 PPARG-IQSEC1 4 67 chr3:12417154:+ chr3:12941865:- FRAMESHIFT NA TCGA-GV-A3JV-01A-11R-A220-07 WNT7A-PPFIA1 6 20 chr3:13854532:- chr11:70374918:+ FRAMESHIFT NA TCGA-GV-A3JW-01A-11R-A20F-07 DCP2-TBCA 59 105 chr5:112976986:+ chr5:77708347:- INFRAME NA TCGA-GV-A3JW-01A-11R-A20F-07 MPDU1-GUCD1 9 32 chr17:7583965:+ chr22:24549001:- INFRAME NA TCGA-GV-A3JW-01A-11R-A20F-07 SNX29-NCAN 9 17 chr16:12027444:+ chr19:19233789:+ INFRAME NA TCGA-GV-A3JW-01A-11R-A20F-07 PI4KAP2-KB-1183D5.13 5 22 chr22:21514137:- chr22:21307028:- . NA TCGA-GV-A3JW-01A-11R-A20F-07 DCLRE1C-NMT2 6 3 chr10:14949036:- chr10:15128458:- INFRAME NA TCGA-GV-A3JW-01A-11R-A20F-07 KIDINS220-EYS 2 10 chr2:8770670:- chr6:63999183:- INFRAME NA TCGA-GV-A3JW-01A-11R-A20F-07 NSUN2-TBL1Y 2 3 chr5:6632599:- chrY:7080732:+ FRAMESHIFT NA TCGA-GV-A3JW-01A-11R-A20F-07 RNF19A-PABPC1 1 4 chr8:100274953:- chr8:100718280:- INFRAME NA TCGA-GV-A3JW-01A-11R-A20F-07 QSOX1-TOR1AIP1 1 2 chr1:180178884:+ chr1:179900126:+ FRAMESHIFT NA TCGA-GV-A3JZ-01A-11R-A21D-07 STK38-ZNF184 7 76 chr6:36506583:- chr6:27457409:- INFRAME NA TCGA-GV-A3JZ-01A-11R-A21D-07 URI1-ZNF33A 2 19 chr19:30005708:+ chr10:38054378:+ INFRAME NA TCGA-GV-A3JZ-01A-11R-A21D-07 ADGRF1-MEP1A 2 12 chr6:47042191:- chr6:46833074:+ . NA TCGA-GV-A3JZ-01A-11R-A21D-07 RNF213-IL22RA1 3 6 chr17:80263778:+ chr1:24138714:- INFRAME NA TCGA-GV-A3JZ-01A-11R-A21D-07 CDKAL1-RCAN2 2 9 chr6:20781265:+ chr6:46456978:- . NA TCGA-GV-A3JZ-01A-11R-A21D-07 NDUFS2-PSMD4 2 7 chr1:161206597:+ chr1:151262161:+ FRAMESHIFT NA TCGA-GV-A3JZ-01A-11R-A21D-07 CDKAL1-TBC1D1 2 3 chr6:20548705:+ chr4:38089932:+ INFRAME NA TCGA-GV-A3QF-01A-31R-A22U-07 TK1-DNAH17 2 33 chr17:78175050:- chr17:78427108:- INFRAME NA TCGA-GV-A3QF-01A-31R-A22U-07 ACOT7-DNAJC11 2 6 chr1:6318492:- chr1:6667810:- FRAMESHIFT NA TCGA-GV-A3QF-01A-31R-A22U-07 RANGAP1-SNU13 1 9 chr22:41274600:- chr22:41680364:- INFRAME NA TCGA-GV-A3QF-01A-31R-A22U-07 FAM169A-ANKRD31 1 6 chr5:74838965:- chr5:75118297:- INFRAME NA TCGA-GV-A3QF-01A-31R-A22U-07 FNBP1L-DR1 1 3 chr1:93499583:+ chr1:93353908:+ FRAMESHIFT NA TCGA-GV-A3QF-01A-31R-A22U-07 SEMA3C-CD36 1 3 chr7:80916679:- chr7:80664406:+ FRAMESHIFT NA TCGA-GV-A3QH-01A-11R-A220-07 CLOCK-UGT2A3 21 83 chr4:55546482:- chr4:68932759:- . NA TCGA-GV-A3QH-01A-11R-A220-07 ALCAM-SH3KBP1 16 93 chr3:105367481:+ chrX:19588802:- INFRAME NA TCGA-GV-A3QH-01A-11R-A220-07 MBOAT1-DCDC2 12 46 chr6:20126517:- chr6:24302044:- INFRAME NA TCGA-GV-A3QH-01A-11R-A220-07 USP38-IL17F 15 18 chr4:143197924:+ chr6:52237168:- FRAMESHIFT NA TCGA-GV-A3QH-01A-11R-A220-07 ARHGAP29-MID2 2 8 chr1:94237415:- chrX:107903958:+ . NA TCGA-GV-A3QI-01A-11R-A220-07 WIPF2-MED24 13 78 chr17:40219492:+ chr17:40057634:- . NA TCGA-GV-A3QI-01A-11R-A220-07 ARHGEF12-GRIK4 11 26 chr11:120431911:+ chr11:120802693:+ FRAMESHIFT NA TCGA-GV-A3QI-01A-11R-A220-07 DOCK9-SLC15A1 9 26 chr13:99086223:- chr13:98709911:- INFRAME NA TCGA-GV-A3QI-01A-11R-A220-07 COMMD1-FARS2 6 36 chr2:62000982:+ chr6:5771291:+ INFRAME NA TCGA-GV-A3QI-01A-11R-A220-07 ENOX2-FIRRE 5 36 chrX:130688863:- chrX:131709556:- . NA TCGA-GV-A3QI-01A-11R-A220-07 NPRL3-KIFC2 3 40 chr16:123433:- chr8:144472210:+ . NA TCGA-GV-A3QI-01A-11R-A220-07 TMEM248-TYW1 11 2 chr7:66921461:+ chr7:67083430:+ . NA TCGA-GV-A3QI-01A-11R-A220-07 SYT16-MNAT1 6 20 chr14:61970311:+ chr14:60879714:+ FRAMESHIFT NA TCGA-GV-A3QI-01A-11R-A220-07 RNF38-PAX5 4 13 chr9:36424613:- chr9:36923484:- . NA TCGA-GV-A3QI-01A-11R-A220-07 DHRS2-GAPDH 1 11 chr14:23636772:+ chr12:6536494:+ . NA TCGA-GV-A3QI-01A-11R-A220-07 MBD3-ZNF823 1000 1000 chr19:1577144:- chr19:11725327:- . NA TCGA-GV-A3QK-01B-11R-A23N-07 KDM2A-GSTP1 2 18 chr11:67121358:+ chr11:67584134:+ FRAMESHIFT NA TCGA-GV-A40E-01A-12R-A23N-07 DEK-KIF25 13 55 chr6:18263843:- chr6:168030773:+ FRAMESHIFT NA TCGA-GV-A40E-01A-12R-A23N-07 MYH9-TRIOBP 11 60 chr22:36305930:- chr22:37751772:+ INFRAME NA TCGA-GV-A40E-01A-12R-A23N-07 PVT1-EFNA1 11 22 chr8:127890998:+ chr1:155131339:+ . NA TCGA-GV-A40E-01A-12R-A23N-07 MGAT5B-CYP11A1 8 13 chr17:76882298:+ chr15:74348055:- INFRAME NA TCGA-GV-A40E-01A-12R-A23N-07 ANXA8-SPATA17 5 9 chr10:47483913:- chr1:217648882:+ FRAMESHIFT NA TCGA-GV-A40E-01A-12R-A23N-07 NHSL1-SLCO2B1 3 10 chr6:138441983:- chr11:75162655:+ INFRAME NA TCGA-GV-A40E-01A-12R-A23N-07 GALNT18-BECN1 2 3 chr11:11432621:- chr17:42823879:- . NA TCGA-GV-A40G-01A-11R-A23N-07 ZNF564-COL5A3 6 19 chr19:12551330:- chr19:10001881:- INFRAME NA TCGA-GV-A40G-01A-11R-A23N-07 MYBL2-TOX2 3 14 chr20:43687072:+ chr20:44006547:+ FRAMESHIFT NA TCGA-GV-A40G-01A-11R-A23N-07 PDXP-SLC17A9 2 6 chr22:37659356:+ chr20:62956765:+ FRAMESHIFT NA TCGA-GV-A6ZA-01A-12R-A33J-07 NCOA2-ALKAL1 3 30 chr8:70296744:- chr8:52542445:- . NA TCGA-H4-A2HO-01A-11R-A180-07 EHMT1-PPP1R37 6 29 chr9:137728529:+ chr19:45138514:+ INFRAME NA TCGA-H4-A2HO-01A-11R-A180-07 WDR48-PPARG 1 13 chr3:39063190:+ chr3:12379704:+ FRAMESHIFT NA TCGA-H4-A2HO-01A-11R-A180-07 PEAK1-VPS33B 1 11 chr15:77283883:- chr15:91017885:- . NA TCGA-H4-A2HO-01A-11R-A180-07 DDI2-DNAJC16 1 8 chr1:15651895:+ chr1:15544399:+ INFRAME NA TCGA-H4-A2HO-01A-11R-A180-07 TRMU-FBLN1 1 5 chr22:46343368:+ chr22:45562912:+ FRAMESHIFT NA TCGA-H4-A2HQ-01A-11R-A180-07 POLR2J3-ORC5 4 21 chr7:102566997:- chr7:104136893:- FRAMESHIFT NA TCGA-H4-A2HQ-01A-11R-A180-07 XPO6-DRC3 1 26 chr16:28152659:- chr17:17977582:+ . NA TCGA-H4-A2HQ-01A-11R-A180-07 WWOX-NUDT7 2 5 chr16:78425055:+ chr16:77741582:+ INFRAME NA TCGA-H4-A2HQ-01A-11R-A180-07 SHANK2-IFT140 1 7 chr11:71056481:- chr16:1511150:- INFRAME NA TCGA-H4-A2HQ-01A-11R-A180-07 CREBBP-PRSS22 1 4 chr16:3850297:- chr16:2854022:- FRAMESHIFT Likely Oncogenic NA TCGA-HQ-A2OE-01A-11R-A206-07 ZNF598-C16orf62 32 186 chr16:2009524:- chr16:19691353:+ FRAMESHIFT NA TCGA-HQ-A2OE-01A-11R-A206-07 SSBP3-EDA 16 84 chr1:54401861:- chrX:69860857:+ INFRAME NA TCGA-HQ-A2OE-01A-11R-A206-07 SPINK1-C5orf46 11 74 chr5:147828022:- chr5:147901773:- FRAMESHIFT NA TCGA-HQ-A2OE-01A-11R-A206-07 STX3-OOSP1 9 77 chr11:59793514:+ chr11:59942847:+ . NA TCGA-HQ-A2OE-01A-11R-A206-07 ZNF544-CCDC61 10 25 chr19:58246794:+ chr19:46003008:+ . NA TCGA-HQ-A2OE-01A-11R-A206-07 CEP295-WDR90 5 31 chr11:93706897:+ chr16:655307:+ FRAMESHIFT NA TCGA-HQ-A2OE-01A-11R-A206-07 NUP85-TRIM80P 5 15 chr17:75226157:+ chr17:75079053:+ . NA TCGA-HQ-A2OE-01A-11R-A206-07 GNPAT-TRIM67 4 9 chr1:231251143:+ chr1:231208947:+ FRAMESHIFT NA TCGA-HQ-A2OE-01A-11R-A206-07 SLC22A23-ECHDC1 2 14 chr6:3323834:- chr6:127331030:- FRAMESHIFT NA TCGA-HQ-A2OE-01A-11R-A206-07 C12orf73-GLT8D2 2 9 chr12:103965516:- chr12:104021491:- . NA TCGA-HQ-A2OE-01A-11R-A206-07 PPARG-CRYBA4 1 5 chr3:12381491:+ chr22:26623234:+ INFRAME NA TCGA-HQ-A2OE-01A-11R-A206-07 LPIN1-TBC1D7 1 3 chr2:11765733:+ chr6:13325174:- FRAMESHIFT NA TCGA-HQ-A5ND-01A-11R-A26T-07 SORL1-DISC1FP1 1 7 chr11:121625277:+ chr11:90801766:+ . NA TCGA-HQ-A5NE-01A-12R-A28M-07 RB1-WDFY2 3 13 chr13:48307406:+ chr13:51751310:+ FRAMESHIFT Likely Oncogenic NA TCGA-HQ-A5NE-01A-12R-A28M-07 RBM39-C20orf203 2 14 chr20:35740824:- chr20:32651981:- . NA TCGA-HQ-A5NE-01A-12R-A28M-07 IL9R-VAMP7 1 2 chrX:155997787:+ chrX:155919813:+ INFRAME NA TCGA-K4-A3WS-01A-11R-A22U-07 DNMT3B-DUSP15 2 14 chr20:32789012:+ chr20:31869597:- INFRAME NA TCGA-K4-A3WS-01A-11R-A22U-07 PPARD-CERS3 1 10 chr6:35347150:+ chr15:100479478:- FRAMESHIFT NA TCGA-K4-A3WS-01A-11R-A22U-07 RARG-BCAS1 2 6 chr12:53227362:- chr20:54058723:- . NA TCGA-K4-A3WU-01B-11R-A23N-07 ZCCHC8-TOP3A 5 64 chr12:122499973:- chr17:18292852:- . NA TCGA-K4-A3WU-01B-11R-A23N-07 BCKDHB-TTK 8 37 chr6:80203212:+ chr6:80042119:+ INFRAME NA TCGA-K4-A3WU-01B-11R-A23N-07 HPGD-GUCY1A3 5 47 chr4:174521944:- chr4:155708236:+ FRAMESHIFT NA TCGA-K4-A3WU-01B-11R-A23N-07 FANCD2-CIDECP 3 18 chr3:10028721:+ chr3:10018071:- . NA TCGA-K4-A3WU-01B-11R-A23N-07 RHBDF2-BRIP1 1 16 chr17:76487712:- chr17:61743134:- . Likely Oncogenic NA TCGA-K4-A3WU-01B-11R-A23N-07 FSTL4-SLC22A4 3 4 chr5:133567186:- chr5:132343760:+ FRAMESHIFT NA TCGA-K4-A3WU-01B-11R-A23N-07 TOP3A-ZCCHC8 3 4 chr17:18294703:- chr12:122492789:- INFRAME NA TCGA-K4-A3WU-01B-11R-A23N-07 ST6GALNAC2-BRIP1 2 7 chr17:76578756:- chr17:61743134:- FRAMESHIFT Likely Oncogenic NA TCGA-K4-A3WU-01B-11R-A23N-07 HMGXB3-PPARGC1B 2 6 chr5:150032603:+ chr5:149847458:+ FRAMESHIFT NA TCGA-K4-A3WV-01A-11R-A22U-07 JARID2-PPP1R10 25 136 chr6:15374252:+ chr6:30616998:- . NA TCGA-K4-A3WV-01A-11R-A22U-07 CARMIL1-CTSW 5 27 chr6:25581439:+ chr11:65881407:+ FRAMESHIFT NA TCGA-K4-A3WV-01A-11R-A22U-07 SETMAR-SUMF1 4 28 chr3:4303526:+ chr3:4362254:- INFRAME NA TCGA-K4-A3WV-01A-11R-A22U-07 GMDS-MRPS18B 2 32 chr6:1726416:- chr6:30624883:+ FRAMESHIFT NA TCGA-K4-A3WV-01A-11R-A22U-07 WIPF2-MSL1 5 12 chr17:40219492:+ chr17:40126183:+ . NA TCGA-K4-A3WV-01A-11R-A22U-07 C6orf48-CARMIL1 4 14 chr6:31837435:+ chr6:25420114:+ FRAMESHIFT NA TCGA-K4-A3WV-01A-11R-A22U-07 PLEKHH1-GPHN 4 12 chr14:67562035:+ chr14:67058649:+ INFRAME NA TCGA-K4-A3WV-01A-11R-A22U-07 SEPT6-CUL4B 2 6 chrX:119629318:- chrX:120574630:- . NA TCGA-K4-A3WV-01A-11R-A22U-07 FAM162A-CASR 1 7 chr3:122384299:+ chr3:122253948:+ . NA TCGA-K4-A4AB-01B-12R-A28M-07 HERC2P9-TRPM1 1 7 chr15:28590260:+ chr15:31076984:- . NA TCGA-K4-A4AC-01A-21R-A26T-07 EPN2-MAP2K3 18 63 chr17:19237531:+ chr17:21298413:+ . NA TCGA-K4-A4AC-01A-21R-A26T-07 VPS13B-BAALC-AS2 13 72 chr8:99442635:+ chr8:103133369:- . NA TCGA-K4-A4AC-01A-21R-A26T-07 SLC7A1-CDX2 12 73 chr13:29553761:- chr13:27965015:- . NA TCGA-K4-A4AC-01A-21R-A26T-07 STXBP3-GPR61 3 8 chr1:108800305:+ chr1:109545311:+ . NA TCGA-K4-A4AC-01A-21R-A26T-07 ZFYVE26-RBM25 1 2 chr14:67815770:- chr14:73088001:+ FRAMESHIFT NA TCGA-K4-A5RH-01A-11R-A30C-07 ARHGEF2-S100A7 149 850 chr1:155978365:- chr1:153459030:- . NA TCGA-K4-A5RH-01A-11R-A30C-07 MPRIP-TOM1L2 20 143 chr17:17042971:+ chr17:17862848:- FRAMESHIFT NA TCGA-K4-A5RH-01A-11R-A30C-07 COG6-DLEU1 15 42 chr13:39665154:+ chr13:50492651:+ . NA TCGA-K4-A5RH-01A-11R-A30C-07 ASH1L-PKLR 11 56 chr1:155562153:- chr1:155301416:- . NA TCGA-K4-A5RH-01A-11R-A30C-07 SREBF1-MED9 9 31 chr17:17836727:- chr17:17491279:+ FRAMESHIFT NA TCGA-K4-A5RH-01A-11R-A30C-07 MPRIP-MED9 5 19 chr17:17042971:+ chr17:17491279:+ FRAMESHIFT NA TCGA-K4-A5RH-01A-11R-A30C-07 PI4KA-TTC39C 2 2 chr22:20752903:- chr18:24114554:+ FRAMESHIFT NA TCGA-K4-A5RH-01A-11R-A30C-07 GNA12-ZC4H2 1 5 chr7:2843853:- chrX:64922243:- . NA TCGA-K4-A5RI-01A-11R-A28M-07 RWDD2B-MX2 5 26 chr21:29019211:- chr21:41390565:+ FRAMESHIFT NA TCGA-K4-A5RJ-01A-11R-A28M-07 LIMS1-CCDC138 5 22 chr2:108534594:+ chr2:108804889:+ FRAMESHIFT NA TCGA-K4-A6FZ-01A-11R-A31N-07 TACC1-RAB11FIP1 4 5 chr8:38825368:+ chr8:37863113:- INFRAME NA TCGA-K4-A6MB-01A-11R-A31N-07 HOOK3-BAALC 18 148 chr8:42925629:+ chr8:103212919:+ FRAMESHIFT NA TCGA-K4-A6MB-01A-11R-A31N-07 ZNF251-ARHGAP39 31 69 chr8:144753683:- chr8:144548489:- FRAMESHIFT NA TCGA-K4-A6MB-01A-11R-A31N-07 GRID1-GLUD1 10 32 chr10:86363941:- chr10:87076656:- INFRAME NA TCGA-K4-A6MB-01A-11R-A31N-07 DIEXF-TRAF3IP3 6 17 chr1:209831043:+ chr1:209772948:+ FRAMESHIFT NA TCGA-K4-A6MB-01A-11R-A31N-07 RNF19A-NCALD 2 9 chr8:100309867:- chr8:101719648:- . NA TCGA-K4-A6MB-01A-11R-A31N-07 SRPK1-EHMT2 1 12 chr6:35888815:- chr6:31881092:- INFRAME NA TCGA-K4-A6MB-01A-11R-A31N-07 MRPL48-ATG16L2 1 4 chr11:73787992:+ chr11:72816728:+ FRAMESHIFT NA TCGA-K4-A6MB-01A-11R-A31N-07 ANKRD46-LRRC4C 1 2 chr8:100559711:- chr11:41223008:- . NA TCGA-K4-A83P-01A-11R-A352-07 MAP2K5-C15orf61 3 17 chr15:67600749:+ chr15:67526418:+ FRAMESHIFT NA TCGA-K4-A83P-01A-11R-A352-07 JARID2-GMPR 4 9 chr6:15410365:+ chr6:16274415:+ FRAMESHIFT NA TCGA-K4-A83P-01A-11R-A352-07 SBF1-FBLN1 4 5 chr22:50454512:- chr22:45542155:+ FRAMESHIFT NA TCGA-K4-A83P-01A-11R-A352-07 LUC7L-CORIN 1 12 chr16:199062:- chr4:47665263:- FRAMESHIFT NA TCGA-K4-A83P-01A-11R-A352-07 UBE2G1-TULP2 1 6 chr17:4366271:- chr19:48895162:- INFRAME NA TCGA-K4-A83P-01A-11R-A352-07 FAM118A-SBF1 1 3 chr22:45336411:+ chr22:50456673:- INFRAME NA TCGA-K4-A83P-01A-11R-A352-07 NOA1-ATP10D 1 3 chr4:56968384:- chr4:47523012:+ FRAMESHIFT NA TCGA-K4-AAQO-01A-11R-A38B-07 ZNF570-ECH1 5 40 chr19:37476434:+ chr19:38831790:- . NA TCGA-K4-AAQO-01A-11R-A38B-07 CNNM4-NEURL3 2 9 chr2:96762401:+ chr2:96500924:- INFRAME NA TCGA-K4-AAQO-01A-11R-A38B-07 SMG7-COLGALT2 1 5 chr1:183472649:+ chr1:183978520:- INFRAME NA TCGA-KQ-A41O-01A-12R-A352-07 ARAP1-SLC22A8 2 11 chr11:72692753:- chr11:63014962:- . NA TCGA-KQ-A41P-01A-12R-A33J-07 CAP1-NFYC 3 1 chr1:40040801:+ chr1:40738836:+ . NA TCGA-KQ-A41P-01A-12R-A33J-07 NEIL3-AGA 2 5 chr4:177351549:+ chr4:177431808:- INFRAME NA TCGA-KQ-A41P-01A-12R-A33J-07 STARD7-LRRN1 1 4 chr2:96193242:- chr3:3844364:+ . NA TCGA-KQ-A41Q-01A-11R-A33J-07 STXBP6-SLC44A4 8 12 chr14:24974665:- chr6:31877082:- INFRAME NA TCGA-KQ-A41Q-01A-11R-A33J-07 FAR2-AGMO 5 22 chr12:29321924:+ chr7:15201359:- INFRAME NA TCGA-KQ-A41Q-01A-11R-A33J-07 YWHAB-ISPD 6 18 chr20:44885886:+ chr7:16376241:- . NA TCGA-KQ-A41Q-01A-11R-A33J-07 PTK2-VPS13B 6 8 chr8:140743230:- chr8:99661354:+ INFRAME NA TCGA-KQ-A41R-01A-21R-A352-07 JARID2-CDKAL1 6 15 chr6:15410365:+ chr6:20649293:+ FRAMESHIFT NA TCGA-KQ-A41R-01A-21R-A352-07 DHRS4L2-RNF31 2 4 chr14:23995133:+ chr14:24157290:+ INFRAME NA TCGA-KQ-A41R-01A-21R-A352-07 ZNF788-RAD23A 2 4 chr19:12092470:+ chr19:12952689:+ INFRAME NA TCGA-KQ-A41R-01A-21R-A352-07 NFAT5-FHOD3 1 3 chr16:69695379:+ chr18:36709095:+ . NA TCGA-KQ-A41S-01A-12R-A33J-07 FKBP5-BYSL 1 6 chr6:35688804:- chr6:41930132:+ . NA TCGA-LC-A66R-01A-41R-A30C-07 FZD6-DPYS 19 49 chr8:103300284:+ chr8:104392991:- FRAMESHIFT NA TCGA-LC-A66R-01A-41R-A30C-07 YWHAE-RPH3AL 5 35 chr17:1400047:- chr17:327579:- . NA TCGA-LC-A66R-01A-41R-A30C-07 RSU1-BAALC 4 33 chr10:16816973:- chr8:103212919:+ INFRAME NA TCGA-LC-A66R-01A-41R-A30C-07 MANBAL-UBR5 1 11 chr20:37301413:+ chr8:102329399:- INFRAME NA TCGA-LC-A66R-01A-41R-A30C-07 TAOK3-VSIG10 2 4 chr12:118199051:- chr12:118066694:- FRAMESHIFT NA TCGA-LC-A66R-01A-41R-A30C-07 ZBTB8OS-BSDC1 1 4 chr1:32633645:- chr1:32384048:- INFRAME NA TCGA-LT-A5Z6-01A-11R-A28M-07 CCSER1-BMP2K 4 17 chr4:90400129:+ chr4:78833582:+ FRAMESHIFT NA TCGA-LT-A8JT-01A-11R-A36F-07 ADAM9-TESMIN 1 8 chr8:39071403:+ chr11:68715939:- INFRAME NA TCGA-MV-A51V-01A-11R-A26T-07 GLE1-SPTAN1 1 9 chr9:128515639:+ chr9:128624328:+ INFRAME NA TCGA-MV-A51V-01A-11R-A26T-07 KMT5B-CHKA 2 3 chr11:68213477:- chr11:68074830:- . NA TCGA-MV-A51V-01A-11R-A26T-07 LYPLA1-ANO3 1 6 chr8:54100908:- chr11:26553249:+ INFRAME NA TCGA-MV-A51V-01A-11R-A26T-07 ARHGEF9-MSI2 1 3 chrX:63655494:- chr17:57401379:+ FRAMESHIFT NA TCGA-PQ-A6FI-01A-11R-A31N-07 NUP153-DTNBP1 76 619 chr6:17646067:- chr6:15524669:- INFRAME NA TCGA-PQ-A6FI-01A-11R-A31N-07 CLCN3-TDO2 11 24 chr4:169680207:+ chr4:155917395:+ FRAMESHIFT NA TCGA-PQ-A6FN-01A-11R-A31N-07 GNPAT-CAPN9 13 44 chr1:231251143:+ chr1:230787522:+ INFRAME NA TCGA-PQ-A6FN-01A-11R-A31N-07 MED15-TANGO2 1 11 chr22:20568631:+ chr22:20036760:+ . NA TCGA-R3-A69X-01A-22R-A30C-07 UQCRC2-CYB5RL 10 22 chr16:21957566:+ chr1:54179352:- INFRAME NA TCGA-S5-A6DX-01A-11R-A31N-07 GRN-ZC3H3 47 160 chr17:44350800:+ chr8:143484947:- FRAMESHIFT NA TCGA-S5-A6DX-01A-11R-A31N-07 FRS2-LACRT 7 51 chr12:69470530:+ chr12:54633233:- . NA TCGA-S5-A6DX-01A-11R-A31N-07 ASAP1-ADCY2 2 15 chr8:130214556:- chr5:7784365:+ FRAMESHIFT NA TCGA-S5-AA26-01A-11R-A38B-07 TCN1-MS4A4A 3 14 chr11:59854652:- chr11:60292225:+ INFRAME NA TCGA-SY-A9G0-01A-12R-A38B-07 TRIM35-CCNB1IP1 1 13 chr8:27298464:- chr14:20329373:- . NA TCGA-SY-A9G0-01A-12R-A38B-07 TRAF2-CACNA1B 1 5 chr9:136900520:+ chr9:138075819:+ INFRAME NA TCGA-SY-A9G5-01A-11R-A38B-07 METTL23-RNF157 37 78 chr17:76733846:+ chr17:76163084:- . NA TCGA-SY-A9G5-01A-11R-A38B-07 GPI-HKR1 26 106 chr19:34399631:+ chr19:37369179:+ INFRAME NA TCGA-SY-A9G5-01A-11R-A38B-07 EXOC2-OOEP 7 62 chr6:693019:- chr6:73394488:- . NA TCGA-SY-A9G5-01A-11R-A38B-07 TAF8-HFE 5 13 chr6:42066459:+ chr6:26090841:+ INFRAME NA TCGA-SY-A9G5-01A-11R-A38B-07 TMEM120A-RCC1L 1 11 chr7:75994490:- chr7:75043109:- INFRAME NA TCGA-UY-A78K-01A-11R-A33J-07 DGCR8-COMT 12 82 chr22:20080383:+ chr22:19962527:+ . NA TCGA-UY-A78K-01A-11R-A33J-07 BRD4-PGLYRP2 15 6 chr19:15332290:- chr19:15469929:- . Oncogenic NA TCGA-UY-A78K-01A-11R-A33J-07 MKRN2-PPARG 5 25 chr3:12557176:+ chr3:12312380:+ . NA TCGA-UY-A78K-01A-11R-A33J-07 FNIP1-ACSL6 4 17 chr5:131744564:- chr5:131962678:- INFRAME NA TCGA-UY-A78K-01A-11R-A33J-07 ARPC1A-TH 2 16 chr7:99344515:+ chr11:2169871:- FRAMESHIFT NA TCGA-UY-A78K-01A-11R-A33J-07 TBCB-PRX 3 5 chr19:36119298:+ chr19:40396475:- . NA TCGA-UY-A78K-01A-11R-A33J-07 MAP3K1-OR4N2 2 6 chr5:56859915:+ chr14:19733369:+ . Likely Oncogenic NA TCGA-UY-A78K-01A-11R-A33J-07 MOK-HSP90AA1 1 3 chr14:102283478:- chr14:102102082:- INFRAME NA TCGA-UY-A78L-01A-12R-A33J-07 RNF41-MSRB3 3 6 chr12:56213958:- chr12:65308529:+ FRAMESHIFT NA TCGA-UY-A78L-01A-12R-A33J-07 RNF169-POLD3 1 5 chr11:74817714:+ chr11:74668777:+ FRAMESHIFT NA TCGA-UY-A78M-01A-21R-A352-07 UBR5-ODF1 67 129 chr8:102412173:- chr8:102560452:+ INFRAME NA TCGA-UY-A78M-01A-21R-A352-07 UBR5-KB-1980E6.3 13 23 chr8:102412173:- chr8:102529311:+ . NA TCGA-UY-A78M-01A-21R-A352-07 SMG1P5-DOC2A 1 18 chr16:30305055:- chr16:30015262:- . NA TCGA-UY-A78M-01A-21R-A352-07 TMEM120B-ORAI1 1 18 chr12:121712964:+ chr12:121641041:+ INFRAME NA TCGA-UY-A78M-01A-21R-A352-07 PLPP1-MCIDAS 2 2 chr5:55534572:- chr5:55223023:- FRAMESHIFT NA TCGA-UY-A78M-01A-21R-A352-07 ARID1A-ZDHHC18 1 4 chr1:26696100:+ chr1:26832447:+ . Likely Oncogenic NA TCGA-UY-A78M-01A-21R-A352-07 SMG1-DOC2A 1000 1000 chr16:18896052:- chr16:30015262:- . NA TCGA-UY-A78N-01A-12R-A33J-07 PRUNE1-LCE2A 25 119 chr1:151017904:+ chr1:152698882:+ . NA TCGA-UY-A78N-01A-12R-A33J-07 KBTBD6-TEX29 24 60 chr13:41132702:- chr13:111316185:+ . NA TCGA-UY-A78N-01A-12R-A33J-07 UBE4B-CENPS 18 69 chr1:10033694:+ chr1:10440347:+ FRAMESHIFT NA TCGA-UY-A78N-01A-12R-A33J-07 MYCBP2-CPB2 13 25 chr13:77288161:- chr13:46064741:- INFRAME NA TCGA-UY-A78N-01A-12R-A33J-07 ITCH-ARFGAP1 10 33 chr20:34481206:+ chr20:63282819:+ FRAMESHIFT NA TCGA-UY-A78N-01A-12R-A33J-07 UBE4B-CORT 5 9 chr1:10033694:+ chr1:10451377:+ INFRAME NA TCGA-UY-A78N-01A-12R-A33J-07 FAF1-CHIA 4 12 chr1:50655442:- chr1:111314540:+ FRAMESHIFT NA TCGA-UY-A78N-01A-12R-A33J-07 DGCR2-SERINC2 2 5 chr22:19063202:- chr1:31432967:+ FRAMESHIFT NA TCGA-UY-A78N-01A-12R-A33J-07 EPS15-CCDC18 1 9 chr1:51468473:- chr1:93214746:+ FRAMESHIFT NA TCGA-UY-A78N-01A-12R-A33J-07 PRUNE1-LCE4A 1000 1000 chr1:151017904:+ chr1:152708160:+ . NA TCGA-UY-A8OB-01A-12R-A42T-07 NECTIN2-IGSF23 14 100 chr19:44865660:+ chr19:44635401:+ FRAMESHIFT NA TCGA-UY-A8OB-01A-12R-A42T-07 ABCA7-STK11 3 17 chr19:1047654:+ chr19:1189409:+ . Likely Oncogenic NA TCGA-UY-A8OB-01A-12R-A42T-07 TRIM28-ZBTB45 1 7 chr19:58548592:+ chr19:58517673:- INFRAME NA TCGA-UY-A8OB-01A-12R-A42T-07 RB1-CDADC1 1 4 chr13:48304049:+ chr13:49286222:+ FRAMESHIFT Likely Oncogenic NA TCGA-UY-A8OB-01A-12R-A42T-07 NIPSNAP1-NF2 1 2 chr22:29558870:- chr22:29636751:+ FRAMESHIFT Likely Oncogenic NA TCGA-UY-A8OC-01A-11R-A36F-07 HGSNAT-FUT10 27 118 chr8:43182260:+ chr8:33372804:- INFRAME NA TCGA-UY-A9PB-01A-11R-A38B-07 GNB1-FAAP20 2 6 chr1:1890820:- chr1:2185513:- . NA TCGA-UY-A9PB-01A-11R-A38B-07 CREBBP-ADCY9 1 9 chr16:3879832:- chr16:3966966:- FRAMESHIFT Likely Oncogenic NA TCGA-UY-A9PB-01A-11R-A38B-07 ARNTL2-CCDC91 1 6 chr12:27368412:+ chr12:28225795:+ . NA TCGA-UY-A9PB-01A-11R-A38B-07 DDX58-RBMS1 1 1 chr9:32466290:- chr2:160278658:- INFRAME NA TCGA-UY-A9PD-01A-11R-A38B-07 SLFN11-CCL14 17 155 chr17:35366947:- chr17:35983888:- . NA TCGA-UY-A9PD-01A-11R-A38B-07 SPSB3-IFT140 13 59 chr16:1781358:- chr16:1511150:- INFRAME NA TCGA-UY-A9PD-01A-11R-A38B-07 DHX8-FMO5 7 38 chr17:43484185:+ chr1:147190249:- INFRAME NA TCGA-UY-A9PD-01A-11R-A38B-07 CDK12-TAF15 4 32 chr17:39526316:+ chr17:35842367:+ INFRAME Likely Oncogenic NA TCGA-UY-A9PD-01A-11R-A38B-07 PSMD11-DPRX 3 23 chr17:32454619:+ chr19:53634531:+ FRAMESHIFT NA TCGA-UY-A9PD-01A-11R-A38B-07 CDKAL1-WFDC21P 2 5 chr6:20548705:+ chr17:60088301:- . NA TCGA-UY-A9PE-01A-11R-A38B-07 PPIF-SNX31 10 52 chr10:79351583:+ chr8:100636011:- FRAMESHIFT NA TCGA-UY-A9PE-01A-11R-A38B-07 SMARCB1-SNW1 4 15 chr22:23787262:+ chr14:77735012:- INFRAME Likely Oncogenic NA TCGA-UY-A9PE-01A-11R-A38B-07 FBXL2-KIF9 2 7 chr3:33297962:+ chr3:47257560:- INFRAME NA TCGA-UY-A9PE-01A-11R-A38B-07 CERS6-PSMD14 2 3 chr2:168717978:+ chr2:161367478:+ FRAMESHIFT NA TCGA-UY-A9PE-01A-11R-A38B-07 CEP350-TOR1AIP1 1 4 chr1:179997175:+ chr1:179900126:+ INFRAME NA TCGA-UY-A9PE-01A-11R-A38B-07 CLU-MYH9 1 4 chr8:27606354:- chr22:36327488:- FRAMESHIFT NA TCGA-UY-A9PE-01A-11R-A38B-07 TRAK1-PPIL2 1 3 chr3:42014117:+ chr22:21686483:+ . NA TCGA-UY-A9PH-01A-11R-A38B-07 PPFIA1-SHANK2 9 20 chr11:70272436:+ chr11:70820682:- INFRAME NA TCGA-UY-A9PH-01A-11R-A38B-07 LETMD1-LARP4 1 6 chr12:51052207:+ chr12:50453460:+ INFRAME NA TCGA-UY-A9PH-01A-11R-A38B-07 TRPC4AP-ZNF430 1 2 chr20:35003410:- chr19:21056631:+ FRAMESHIFT NA TCGA-XF-A8HC-01A-11R-A36F-07 SYNRG-SHC2 5 19 chr17:37585325:- chr19:425231:- INFRAME NA TCGA-XF-A8HC-01A-11R-A36F-07 SHISA5-UQCRC1 4 21 chr3:48501137:- chr3:48610005:- . NA TCGA-XF-A8HC-01A-11R-A36F-07 CEP192-LDLRAD4 1 3 chr18:13019206:+ chr18:13278105:+ . NA TCGA-XF-A8HD-01A-11R-A36F-07 VGLL4-UPF2 101 390 chr3:11702971:- chr10:11979165:- FRAMESHIFT NA TCGA-XF-A8HD-01A-11R-A36F-07 ANKRD26-MCM10 6 24 chr10:27100085:- chr10:13209091:+ INFRAME NA TCGA-XF-A8HD-01A-11R-A36F-07 EPB41L1-ATP9A 3 19 chr20:36125527:+ chr20:51729978:- FRAMESHIFT NA TCGA-XF-A8HD-01A-11R-A36F-07 FAM208B-AKR1E2 4 5 chr10:5685175:+ chr10:4830675:+ . NA TCGA-XF-A8HD-01A-11R-A36F-07 NEBL-CAMK1D 3 5 chr10:21172383:- chr10:12553225:+ INFRAME NA TCGA-XF-A8HD-01A-11R-A36F-07 NET1-USP6NL 1 4 chr10:5429229:+ chr10:11527567:- FRAMESHIFT NA TCGA-XF-A8HF-01A-11R-A36F-07 FNDC3B-CLDN11 1 10 chr3:172251541:+ chr3:170708044:+ INFRAME NA TCGA-XF-A8HF-01A-11R-A36F-07 NLN-MAST4 1 8 chr5:65792601:+ chr5:66759709:+ INFRAME NA TCGA-XF-A8HF-01A-11R-A36F-07 TSC22D1-TPT1 1 1 chr13:44577057:- chr13:45340184:- . NA TCGA-XF-A8HG-01A-11R-A36F-07 RALGAPA2-C20orf194 15 67 chr20:20653530:- chr20:3270562:- INFRAME NA TCGA-XF-A8HG-01A-11R-A36F-07 C20orf194-EIF2S2 10 24 chr20:3250161:- chr20:34092879:- . NA TCGA-XF-A8HG-01A-11R-A36F-07 EIF6-BANF2 3 20 chr20:35279566:- chr20:17735665:+ FRAMESHIFT NA TCGA-XF-A8HG-01A-11R-A36F-07 PCGF3-SPATA24 5 7 chr4:705970:+ chr5:139402693:- . NA TCGA-XF-A8HG-01A-11R-A36F-07 CEP250-NINL 2 4 chr20:35480145:+ chr20:25470095:- FRAMESHIFT NA TCGA-XF-A8HH-01A-11R-A38B-07 ANKRD46-NCALD 19 13 chr8:100559711:- chr8:101692896:- . NA TCGA-XF-A8HH-01A-11R-A38B-07 XPO1-C2orf74 4 25 chr2:61522611:- chr2:61157862:+ . NA TCGA-XF-A8HH-01A-11R-A38B-07 ERVK13-1-PRSS27 1 6 chr16:2669411:- chr16:2712814:- . NA TCGA-XF-A9SH-01A-11R-A39I-07 CNOT2-ZDHHC17 2 17 chr12:70278274:+ chr12:76826908:+ INFRAME NA TCGA-XF-A9SH-01A-11R-A39I-07 CAPS2-YEATS4 1 4 chr12:75390838:- chr12:69390147:+ FRAMESHIFT NA TCGA-XF-A9SK-01A-11R-A42T-07 ZNF713-NELFB 3 13 chr7:55912723:+ chr9:137272081:+ FRAMESHIFT NA TCGA-XF-A9SK-01A-11R-A42T-07 GRB7-CD300E 2 4 chr17:39744984:+ chr17:74614033:- FRAMESHIFT NA TCGA-XF-A9SK-01A-11R-A42T-07 ROBO1-ADGRL3 2 4 chr3:78685746:- chr4:61813809:+ INFRAME NA TCGA-XF-A9SK-01A-11R-A42T-07 PIEZO1-PMFBP1 1 4 chr16:88784901:- chr16:72120089:- FRAMESHIFT NA TCGA-XF-A9SM-01A-11R-A42T-07 HUWE1-BICD1 4 22 chrX:53624595:- chr12:32367670:+ INFRAME NA TCGA-XF-A9SP-01A-11R-A39I-07 ABR-ACAD10 4 3 chr17:1179667:- chr12:111753772:+ FRAMESHIFT NA TCGA-XF-A9SP-01A-11R-A39I-07 TAB2-UST 2 3 chr6:149379518:+ chr6:149073833:+ INFRAME NA TCGA-XF-A9SP-01A-11R-A39I-07 LARP1B-ABHD18 1 5 chr4:128091512:+ chr4:128035762:+ INFRAME NA TCGA-XF-A9SP-01A-11R-A39I-07 DENND4C-ACER2 1000 1000 chr9:19360488:+ chr9:19423861:+ . NA TCGA-XF-A9ST-01A-11R-A42T-07 TEAD1-CD47 42 99 chr11:12675561:+ chr3:108060852:- . NA TCGA-XF-A9ST-01A-11R-A42T-07 UQCRC1-PRKAR2A 7 79 chr3:48600063:- chr3:48747940:- . NA TCGA-XF-A9ST-01A-11R-A42T-07 SMG1P3-RBM14 12 17 chr16:21519828:- chr11:66624214:+ . NA TCGA-XF-A9ST-01A-11R-A42T-07 ARMC8-CACNA2D2 2 8 chr3:138289120:+ chr3:50476199:- FRAMESHIFT NA TCGA-XF-A9ST-01A-11R-A42T-07 FAM222B-FLOT2 2 4 chr17:28842682:- chr17:28889026:- . NA TCGA-XF-A9ST-01A-11R-A42T-07 TYMS-GNAS 1 1 chr18:662320:+ chr20:58895612:+ INFRAME NA TCGA-XF-A9SU-01A-31R-A39I-07 ITGA3-TRIM80P 28 63 chr17:50074534:+ chr17:75074604:+ . NA TCGA-XF-A9SU-01A-31R-A39I-07 TMEM87B-MERTK 7 22 chr2:112077282:+ chr2:112008383:+ INFRAME NA TCGA-XF-A9SU-01A-31R-A39I-07 NRBF2-REEP3 3 15 chr10:63133500:+ chr10:63594778:+ INFRAME NA TCGA-XF-A9SV-01A-21R-A42T-07 SNRNP70-CDC42EP5 16 118 chr19:49086561:+ chr19:54471685:- . NA TCGA-XF-A9SV-01A-21R-A42T-07 ADAM17-ORAOV1 13 46 chr2:9535834:- chr11:69656652:- INFRAME NA TCGA-XF-A9SV-01A-21R-A42T-07 CYP4F12-MYO9B 5 3 chr19:15697070:+ chr19:17202139:+ INFRAME NA TCGA-XF-A9SV-01A-21R-A42T-07 MBOAT2-TPCN2 1 2 chr2:9003540:- chr11:69135435:+ FRAMESHIFT NA TCGA-XF-A9SY-01A-21R-A42T-07 DAP3-TIPRL 5 48 chr1:155709824:+ chr1:168191369:+ INFRAME NA TCGA-XF-A9SY-01A-21R-A42T-07 NR6A1-DEAF1 2 9 chr9:124771020:- chr11:654051:- FRAMESHIFT NA TCGA-XF-A9SZ-01A-11R-A39I-07 LDLRAP1-TMEM57 8 50 chr1:25543786:+ chr1:25498264:+ INFRAME NA TCGA-XF-A9SZ-01A-11R-A39I-07 EP400-TMPRSS12 4 14 chr12:131950036:+ chr12:50843842:+ . NA TCGA-XF-A9T0-01A-11R-A39I-07 CFDP1-WWOX 50 113 chr16:75395090:- chr16:79211608:+ INFRAME NA TCGA-XF-A9T0-01A-11R-A39I-07 AHR-TSPAN13 33 89 chr7:17299329:+ chr7:16776211:+ FRAMESHIFT NA TCGA-XF-A9T0-01A-11R-A39I-07 TBC1D14-GRPEL1 1 5 chr4:6924111:+ chr4:7064223:- INFRAME NA TCGA-XF-A9T3-01A-11R-A42T-07 GOLGA3-RTN2 2 2 chr12:132776634:- chr19:45495139:- INFRAME NA TCGA-XF-A9T3-01A-11R-A42T-07 GON4L-ARHGEF2 1 3 chr1:155853276:- chr1:155952828:- INFRAME NA TCGA-XF-A9T4-01A-11R-A39I-07 ZCCHC7-TEK 4 60 chr9:37126942:+ chr9:27197315:+ INFRAME NA TCGA-XF-A9T4-01A-11R-A39I-07 CPT1A-GAL3ST3 12 12 chr11:68841775:- chr11:66049149:- . NA TCGA-XF-A9T4-01A-11R-A39I-07 SHB-FAM219A 1 18 chr9:38016011:- chr9:34405964:- FRAMESHIFT NA TCGA-XF-A9T4-01A-11R-A39I-07 MELK-DCTN3 2 8 chr9:36573007:+ chr9:34618760:- . NA TCGA-XF-A9T4-01A-11R-A39I-07 LINGO2-DCTN3 1 3 chr9:28295208:- chr9:34618760:- . NA TCGA-XF-A9T5-01A-11R-A42T-07 MCM9-IGKJ1 12 0 chr6:118917569:- chr2:88861923:- FRAMESHIFT NA TCGA-XF-A9T5-01A-11R-A42T-07 OSGIN2-DECR1 2 6 chr8:89921171:+ chr8:90042728:+ INFRAME NA TCGA-XF-A9T5-01A-11R-A42T-07 PRCC-RHBG 1 1 chr1:156768239:+ chr1:156382748:+ FRAMESHIFT NA TCGA-XF-A9T8-01A-11R-A39I-07 RASAL2-ANKRD45 3 8 chr1:178390206:+ chr1:173659433:- . NA TCGA-XF-A9T8-01A-11R-A39I-07 SRGAP2B-GORAB 2 2 chr1:144995008:- chr1:170539210:+ FRAMESHIFT NA TCGA-XF-AAMG-01A-11R-A42T-07 VEGFA-HIST1H4H 21 150 chr6:43778918:+ chr6:26281587:- . NA TCGA-XF-AAMG-01A-11R-A42T-07 TSPAN13-BZW2 29 47 chr7:16754030:+ chr7:16694834:+ INFRAME NA TCGA-XF-AAMG-01A-11R-A42T-07 WDR48-HERC2 14 7 chr3:39052073:+ chr15:28152830:- INFRAME NA TCGA-XF-AAMG-01A-11R-A42T-07 IRAK2-CDKAL1 2 10 chr3:10200515:+ chr6:20846075:+ FRAMESHIFT NA TCGA-XF-AAMJ-01A-11R-A42T-07 DNM2-RFX2 1 32 chr19:10805967:+ chr19:5997213:- FRAMESHIFT NA TCGA-XF-AAMJ-01A-11R-A42T-07 LARGE1-KCNJ4 1 2 chr22:33604435:- chr22:38428171:- . NA TCGA-XF-AAML-01A-11R-A42T-07 MKRN2-PPARG 4 25 chr3:12557176:+ chr3:12312380:+ . NA TCGA-XF-AAML-01A-11R-A42T-07 VPS72-GABPB2 4 15 chr1:151178001:- chr1:151088190:+ FRAMESHIFT NA TCGA-XF-AAML-01A-11R-A42T-07 PPME1-KANK1 3 6 chr11:74171522:+ chr9:676890:+ . NA TCGA-XF-AAML-01A-11R-A42T-07 USP7-SMARCA2 2 10 chr16:8963207:- chr9:2161686:+ INFRAME NA TCGA-XF-AAML-01A-11R-A42T-07 LRP5-RBFOX1 2 8 chr11:68357847:+ chr16:6654603:+ FRAMESHIFT NA TCGA-XF-AAMQ-01A-11R-A42T-07 PHF20-EPB41L1 4 38 chr20:35842744:+ chr20:36212272:+ INFRAME NA TCGA-XF-AAMQ-01A-11R-A42T-07 SHANK2-ANO1 4 9 chr11:70485314:- chr11:70156947:+ FRAMESHIFT NA TCGA-XF-AAMQ-01A-11R-A42T-07 MATN2-SFMBT1 3 4 chr8:97888242:+ chr3:52916214:- FRAMESHIFT NA TCGA-XF-AAMQ-01A-11R-A42T-07 RAD51B-SMOC1 2 4 chr14:68468250:+ chr14:69992417:+ INFRAME NA TCGA-XF-AAMQ-01A-11R-A42T-07 SHROOM2-FRMPD4 1 3 chrX:9939366:+ chrX:12707469:+ INFRAME NA TCGA-XF-AAMQ-01A-11R-A42T-07 ORAOV1-SHANK2 1 2 chr11:69675190:- chr11:70492465:- FRAMESHIFT NA TCGA-XF-AAMT-01A-11R-A42T-07 HNRNPUL1-CNN1 13 62 chr19:41294686:+ chr19:11541076:+ INFRAME NA TCGA-XF-AAMT-01A-11R-A42T-07 RAB35-GCN1 11 62 chr12:120108417:- chr12:120150043:- INFRAME NA TCGA-XF-AAMT-01A-11R-A42T-07 MAST4-ST8SIA4 4 10 chr5:67133646:+ chr5:100856396:- FRAMESHIFT NA TCGA-XF-AAMT-01A-11R-A42T-07 SMYD2-PTP4A1 1 5 chr1:214281427:+ chr6:63576436:+ FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 HNRNPC-PAPOLA 18 115 chr14:21264672:- chr14:96554485:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 ELMSAN1-NUBPL 29 59 chr14:73787102:- chr14:31599289:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 PCNX1-FRMD6 11 44 chr14:70908003:+ chr14:51489341:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 SPECC1L-UPB1 11 34 chr22:24270983:+ chr22:24510749:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 MTHFD1-PAPLN 7 36 chr14:64388468:+ chr14:73244644:+ FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 C14orf93-TIMM9 8 4 chr14:23010101:- chr14:58411971:- . NA TCGA-XF-AAMW-01A-11R-A42T-07 C1QTNF6-SYN3 5 12 chr22:37197603:- chr22:32980702:- . NA TCGA-XF-AAMW-01A-11R-A42T-07 PITPNB-RFPL3S 5 9 chr22:27896552:- chr22:32360839:- FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 PPP4R4-MYH6 4 12 chr14:94176127:+ chr14:23386131:- FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 SIPA1L1-PAPOLA 5 5 chr14:71321181:+ chr14:96520055:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 ALG12-KB-208E9.1 4 8 chr22:49913385:- chr22:23583478:- . NA TCGA-XF-AAMW-01A-11R-A42T-07 ATG14-MED6 3 12 chr14:55385859:- chr14:70584943:- INFRAME NA TCGA-XF-AAMW-01A-11R-A42T-07 UBAP2-LINGO2 3 11 chr9:33932562:- chr9:27950706:- . NA TCGA-XF-AAMW-01A-11R-A42T-07 TFIP11-IL17RA 3 6 chr22:26510064:- chr22:17097062:+ FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 P2RY6-MRPS35 2 8 chr11:73264649:+ chr12:27737539:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 SYNE2-ATG2B 1 11 chr14:64031357:+ chr14:96295560:- INFRAME NA TCGA-XF-AAMW-01A-11R-A42T-07 DUXAP9-AP5M1 2 6 chr14:19066347:+ chr14:57274244:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 CCDC88C-SUSD6 2 5 chr14:91408659:- chr14:69658513:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 CDKN2A-EXD2 2 5 chr9:21974678:- chr14:69228816:+ INFRAME Likely Oncogenic NA TCGA-XF-AAMW-01A-11R-A42T-07 MARK3-BAG5 2 4 chr14:103468186:+ chr14:103561192:- FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 RAD51B-SIPA1L1 1 7 chr14:67835196:+ chr14:71576535:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 SUSD6-SIVA1 1 4 chr14:69611828:+ chr14:104766790:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 VRK1-MMP14 1 4 chr14:96797447:+ chr14:22843257:+ . NA TCGA-XF-AAMW-01A-11R-A42T-07 DAD1-C14orf37 1 3 chr14:22575059:- chr14:58139414:- . NA TCGA-XF-AAMW-01A-11R-A42T-07 MAP4K5-ADCK1 1 3 chr14:50504800:- chr14:77887091:+ FRAMESHIFT NA TCGA-XF-AAMW-01A-11R-A42T-07 MMP14-PPM1A 1 3 chr14:22845366:+ chr14:60282684:+ INFRAME NA TCGA-XF-AAMW-01A-11R-A42T-07 PLEKHH1-L2HGDH 1 3 chr14:67541993:+ chr14:50269330:- INFRAME NA TCGA-XF-AAMW-01A-11R-A42T-07 TOGARAM1-STYX 1 2 chr14:44964467:+ chr14:52744852:+ INFRAME NA TCGA-XF-AAMX-01A-11R-A42T-07 FOXK2-OGFOD3 12 37 chr17:82520307:+ chr17:82409410:- INFRAME NA TCGA-XF-AAMX-01A-11R-A42T-07 CAMSAP1-RABL6 5 48 chr9:135903998:- chr9:136813259:+ . NA TCGA-XF-AAMX-01A-11R-A42T-07 UBTD2-SH3PXD2B 7 34 chr5:172283596:- chr5:172325380:- FRAMESHIFT NA TCGA-XF-AAMX-01A-11R-A42T-07 NUFIP2-VTN 8 26 chr17:29285992:- chr17:28370270:- . NA TCGA-XF-AAMX-01A-11R-A42T-07 DCAF6-BCAS3 4 26 chr1:168023047:+ chr17:60910532:+ FRAMESHIFT NA TCGA-XF-AAMX-01A-11R-A42T-07 TNRC6B-FAM83F 5 17 chr22:40044998:+ chr22:40019168:+ . NA TCGA-XF-AAMX-01A-11R-A42T-07 ARL13B-EPHA6 3 10 chr3:94003908:+ chr3:97010004:+ FRAMESHIFT NA TCGA-XF-AAMX-01A-11R-A42T-07 CPD-PDE4D 3 10 chr17:30443971:+ chr5:59215968:- INFRAME NA TCGA-XF-AAMX-01A-11R-A42T-07 MAPKBP1-VPS39 1 13 chr15:41799914:+ chr15:42163728:- FRAMESHIFT NA TCGA-XF-AAMX-01A-11R-A42T-07 PPFIBP1-CACNA1C 1 10 chr12:27524365:+ chr12:2581590:+ . NA TCGA-XF-AAMX-01A-11R-A42T-07 B3GLCT-POMP 1 8 chr13:31247966:+ chr13:28662410:+ INFRAME NA TCGA-XF-AAMX-01A-11R-A42T-07 BDH1-BMT2 1 8 chr3:197546361:- chr7:112832675:- INFRAME NA TCGA-XF-AAMX-01A-11R-A42T-07 FREM1-UNC13B 1 7 chr9:14909914:- chr9:35228015:+ . NA TCGA-XF-AAMX-01A-11R-A42T-07 SH3PXD2A-ITPRIP 1 5 chr10:103660983:- chr10:104316064:- . NA TCGA-XF-AAMX-01A-11R-A42T-07 SPC24-DOCK6 1 2 chr19:11155617:- chr19:11201052:- INFRAME NA TCGA-XF-AAMY-01A-11R-A42T-07 R3HDM2-ZNF385A 11 52 chr12:57310264:- chr12:54375954:- INFRAME NA TCGA-XF-AAMY-01A-11R-A42T-07 CACNA1I-FBXW5 8 22 chr22:39682661:+ chr9:136941171:- FRAMESHIFT NA TCGA-XF-AAMY-01A-11R-A42T-07 TSEN2-SYN2 7 20 chr3:12496554:+ chr3:12183312:+ FRAMESHIFT NA TCGA-XF-AAMY-01A-11R-A42T-07 ASH1L-UBQLN4 2 18 chr1:155562153:- chr1:156051857:- . NA TCGA-XF-AAMY-01A-11R-A42T-07 METTL21B-CDKAL1 1 6 chr12:57773073:+ chr6:21198021:+ INFRAME NA TCGA-XF-AAMY-01A-11R-A42T-07 SMG1-SULT1A2 1 4 chr16:18896052:- chr16:28595675:- INFRAME NA TCGA-XF-AAMZ-01A-11R-A42T-07 YWHAZ-GAL 83 326 chr8:100951929:- chr11:68684924:+ . NA TCGA-XF-AAMZ-01A-11R-A42T-07 MYO10-PFDN2 21 126 chr5:16710908:- chr1:161102375:- INFRAME NA TCGA-XF-AAMZ-01A-11R-A42T-07 SAP30BP-MYO15B 6 24 chr17:75671863:+ chr17:75619681:+ INFRAME NA TCGA-XF-AAMZ-01A-11R-A42T-07 MRPL21-CPT1A 3 31 chr11:68892890:- chr11:68760338:- FRAMESHIFT NA TCGA-XF-AAMZ-01A-11R-A42T-07 DEAF1-SH3GL1 2 2 chr11:686858:- chr19:4366994:- INFRAME NA TCGA-XF-AAMZ-01A-11R-A42T-07 TM2D2-GOT1L1 1 4 chr8:38993545:- chr8:37934486:- FRAMESHIFT NA TCGA-XF-AAN0-01A-11R-A42T-07 TRIB1-SAE1 4 26 chr8:125431262:+ chr19:47203671:+ FRAMESHIFT NA TCGA-XF-AAN3-01A-11R-A42T-07 GABRE-SERINC2 1 2 chrX:151974570:- chr1:31432967:+ INFRAME NA TCGA-XF-AAN4-01A-11R-A42T-07 ATP11B-NET1 7 5 chr3:182898772:+ chr10:5451830:+ INFRAME NA TCGA-XF-AAN5-01A-11R-A42T-07 FAM228B-UBXN2A 1 2 chr2:24147086:+ chr2:23958301:+ . NA TCGA-XF-AAN7-01A-11R-A42T-07 LDLRAD3-PAMR1 2 6 chr11:35944144:+ chr11:35441693:- INFRAME NA TCGA-XF-AAN7-01A-11R-A42T-07 CDKAL1-GUCA1A 1 5 chr6:21000372:+ chr6:42162920:+ . NA TCGA-YC-A89H-01A-11R-A36F-07 MAPRE1-UQCC1 11 24 chr20:32826048:+ chr20:35347272:- FRAMESHIFT NA TCGA-YC-A89H-01A-11R-A36F-07 ASPH-TACC1 2 9 chr8:61618978:- chr8:38742351:+ . NA TCGA-YF-AA3L-01A-11R-A38B-07 NUMB-TTLL5 4 5 chr14:73292734:- chr14:75820007:+ INFRAME NA TCGA-ZF-A9R1-01A-11R-A39I-07 PUM1-SDC3 2 24 chr1:31059299:- chr1:30878740:- FRAMESHIFT NA TCGA-ZF-A9R3-01A-11R-A38B-07 RASSF8-CMAS 6 28 chr12:25959148:+ chr12:22062281:+ . NA TCGA-ZF-A9R4-01A-11R-A38B-07 TUFT1-ANXA9 4 59 chr1:151540426:+ chr1:150983338:+ INFRAME NA TCGA-ZF-A9R7-01A-11R-A38B-07 BIN3-PHYHIP 2 11 chr8:22669044:- chr8:22228386:- . NA TCGA-ZF-A9R7-01A-11R-A38B-07 SFSWAP-EP400NL 2 9 chr12:131778330:+ chr12:132103997:+ . NA TCGA-ZF-A9R9-01A-11R-A38B-07 MAN2B1-RTBDN 16 73 chr19:12649913:- chr19:12826871:- INFRAME NA TCGA-ZF-A9R9-01A-11R-A38B-07 BCL2L1-NOL4L 1 4 chr20:31721655:- chr20:32486801:- INFRAME NA TCGA-ZF-A9RC-01A-11R-A38B-07 FRS2-BEST3 1 34 chr12:69537983:+ chr12:69643787:- . NA TCGA-ZF-A9RC-01A-11R-A38B-07 ASAP1-UBBP4 2 23 chr8:130214556:- chr17:22204087:+ . NA TCGA-ZF-A9RC-01A-11R-A38B-07 UNC13A-NOSIP 1 5 chr19:17617702:- chr19:49560692:- . NA TCGA-ZF-A9RD-01A-11R-A42T-07 JUP-ACLY 8 38 chr17:41786588:- chr17:41878924:- . NA TCGA-ZF-A9RD-01A-11R-A42T-07 EPB41L4B-PTBP3 1 2 chr9:109320141:- chr9:112297916:- INFRAME NA TCGA-ZF-A9RE-01A-11R-A38B-07 BPTF-TTYH2 2 6 chr17:67826337:+ chr17:74237294:+ FRAMESHIFT NA TCGA-ZF-A9RE-01A-11R-A38B-07 C10orf11-P4HA1 1 3 chr10:75438494:+ chr10:73030370:- INFRAME NA TCGA-ZF-A9RF-01A-11R-A38B-07 SMARCC1-CSPG5 24 27 chr3:47772817:- chr3:47572874:- FRAMESHIFT NA TCGA-ZF-A9RF-01A-11R-A38B-07 ARHGAP29-ABCA4 4 4 chr1:94231407:- chr1:94113066:- FRAMESHIFT NA TCGA-ZF-A9RF-01A-11R-A38B-07 CDKAL1-LIG1 2 10 chr6:20649377:+ chr19:48131171:- FRAMESHIFT NA TCGA-ZF-A9RF-01A-11R-A38B-07 PLA2G12A-ELOVL6 1 1 chr4:109729602:- chr4:110059754:- INFRAME NA TCGA-ZF-A9RL-01A-11R-A38B-07 USP31-RHD 18 37 chr16:23102319:- chr1:25284573:+ INFRAME NA TCGA-ZF-A9RL-01A-11R-A38B-07 IFT52-MXRA8 4 7 chr20:43596522:+ chr1:1356704:- FRAMESHIFT NA TCGA-ZF-A9RL-01A-11R-A38B-07 PAG1-KIAA1429 2 10 chr8:81029996:- chr8:94514951:- . NA TCGA-ZF-A9RL-01A-11R-A38B-07 ZC2HC1A-ANGPT1 3 6 chr8:78698513:+ chr8:107264351:- INFRAME NA TCGA-ZF-A9RM-01A-11R-A38B-07 CCNT1-LALBA 16 69 chr12:48705768:- chr12:48568017:- FRAMESHIFT NA TCGA-ZF-A9RM-01A-11R-A38B-07 MED13L-WSCD2 5 35 chr12:116237468:- chr12:108224739:+ INFRAME NA TCGA-ZF-A9RM-01A-11R-A38B-07 HNRNPF-TMLHE 2 5 chr10:43394630:- chrX:155545277:- . NA TCGA-ZF-A9RM-01A-11R-A38B-07 SPTAN1-ZER1 1 6 chr9:128552696:+ chr9:128742745:- . NA TCGA-ZF-A9RN-01A-11R-A42T-07 YEATS2-HTR3E 9 129 chr3:183715262:+ chr3:184100485:+ INFRAME NA TCGA-ZF-A9RN-01A-11R-A42T-07 PTPRK-POPDC3 4 7 chr6:128397566:- chr6:105162160:- . NA TCGA-ZF-AA4N-01A-11R-A38B-07 USP4-CCDC13 2 5 chr3:49310620:- chr3:42758351:- . NA TCGA-ZF-AA4R-01A-11R-A38B-07 SNX27-THEM4 31 30 chr1:151612512:+ chr1:151877125:- INFRAME NA TCGA-ZF-AA4R-01A-11R-A38B-07 BNIPL-THEM5 1000 1000 chr1:151039025:+ chr1:151848293:- . NA TCGA-ZF-AA4T-01A-11R-A38B-07 MLLT6-TCAP 340 2209 chr17:38705741:+ chr17:39665373:+ INFRAME NA TCGA-ZF-AA4T-01A-11R-A38B-07 SRCIN1-PSMB3 12 153 chr17:38605633:- chr17:38762411:+ . NA TCGA-ZF-AA4T-01A-11R-A38B-07 CDK12-IKZF3 30 63 chr17:39501439:+ chr17:39832151:- FRAMESHIFT Likely Oncogenic NA TCGA-ZF-AA4T-01A-11R-A38B-07 LIPG-UCMA 7 36 chr18:49569548:+ chr10:13233800:- INFRAME NA TCGA-ZF-AA4T-01A-11R-A38B-07 SRCIN1-CWC25 1 48 chr17:38574876:- chr17:38821073:- INFRAME NA TCGA-ZF-AA4T-01A-11R-A38B-07 IKZF3-SRCIN1 3 31 chr17:39829387:- chr17:38596129:- . NA TCGA-ZF-AA4T-01A-11R-A38B-07 WDR6-CPNE8 6 12 chr3:49007531:+ chr12:38654070:- FRAMESHIFT NA TCGA-ZF-AA4T-01A-11R-A38B-07 GNGT1-NUDT5 2 23 chr7:93591771:+ chr10:12170770:- . NA TCGA-ZF-AA4T-01A-11R-A38B-07 SEC13-GOLPH3L 5 6 chr3:10321050:- chr1:150661928:- INFRAME NA TCGA-ZF-AA4T-01A-11R-A38B-07 MLLT6-PNMT 3 9 chr17:38705741:+ chr17:39669629:+ INFRAME NA TCGA-ZF-AA4T-01A-11R-A38B-07 L3MBTL4-TRDMT1 3 7 chr18:6237964:- chr10:17174660:- INFRAME NA TCGA-ZF-AA4T-01A-11R-A38B-07 CDK12-PLXDC1 1 10 chr17:39463117:+ chr17:39087702:- FRAMESHIFT Likely Oncogenic NA TCGA-ZF-AA4T-01A-11R-A38B-07 IMPA2-THEM7P 1 7 chr18:12014373:+ chr11:32230361:- . NA TCGA-ZF-AA4T-01A-11R-A38B-07 MYO5B-DCC 2 3 chr18:50194767:- chr18:52752054:+ FRAMESHIFT NA TCGA-ZF-AA4T-01A-11R-A38B-07 KLHL5-TMEM156 1 5 chr4:39115330:+ chr4:38971137:- FRAMESHIFT NA TCGA-ZF-AA4U-01A-11R-A38B-07 TBC1D15-CPSF6 5 11 chr12:71918548:+ chr12:69269512:+ FRAMESHIFT NA TCGA-ZF-AA4U-01A-11R-A38B-07 LGR5-PTPRR 2 11 chr12:71504685:+ chr12:70892977:- FRAMESHIFT NA TCGA-ZF-AA4U-01A-11R-A38B-07 KCNMB4-PTPRR 1000 1000 chr12:70434292:+ chr12:70754380:- . NA TCGA-ZF-AA4V-01A-11R-A38B-07 GPX4-MIDN 1 34 chr19:1106459:+ chr19:1256995:+ FRAMESHIFT NA TCGA-ZF-AA4V-01A-11R-A38B-07 CSNK1D-DUS1L 3 10 chr17:82245976:- chr17:82065069:- . NA TCGA-ZF-AA4V-01A-11R-A38B-07 ZC3H7A-CD99 4 6 chr16:11774236:- chrY:2714422:+ FRAMESHIFT NA TCGA-ZF-AA4V-01A-11R-A38B-07 NIPBL-MRPS30 4 4 chr5:36877178:+ chr5:44811009:+ . NA TCGA-ZF-AA4V-01A-11R-A38B-07 CPSF6-EXOC3 2 5 chr12:69262562:+ chr5:464290:+ FRAMESHIFT NA TCGA-ZF-AA4W-01A-12R-A38B-07 ZNF316-MAD1L1 1 2 chr7:6644593:+ chr7:1816228:- FRAMESHIFT NA TCGA-ZF-AA4X-01A-11R-A38B-07 TYMS-GNAS 1 1 chr18:662320:+ chr20:58895612:+ INFRAME NA TCGA-ZF-AA51-01A-21R-A39I-07 SRP68-CDK3 7 31 chr17:76046038:- chr17:76005298:+ INFRAME NA TCGA-ZF-AA51-01A-21R-A39I-07 MARK2-C11orf84 4 11 chr11:63839560:+ chr11:63817805:+ FRAMESHIFT NA TCGA-ZF-AA51-01A-21R-A39I-07 TAB2-PPP1R14C 2 12 chr6:149397764:+ chr6:150214744:+ INFRAME NA TCGA-ZF-AA51-01A-21R-A39I-07 ZNF665-NLRP12 1 12 chr19:53182884:- chr19:53796029:- FRAMESHIFT NA TCGA-ZF-AA51-01A-21R-A39I-07 PTPN6-LRRC23 2 7 chr12:6952177:+ chr12:6905585:+ . NA TCGA-ZF-AA51-01A-21R-A39I-07 DLG3-MED12 2 3 chrX:70454316:+ chrX:71127893:+ FRAMESHIFT Likely Oncogenic NA TCGA-ZF-AA51-01A-21R-A39I-07 R3HDM4-TMEM259 2 3 chr19:913087:- chr19:1014473:- FRAMESHIFT NA TCGA-ZF-AA51-01A-21R-A39I-07 ADORA2B-PIGL 1 4 chr17:15945583:+ chr17:16299888:+ INFRAME NA TCGA-ZF-AA53-01A-11R-A39I-07 ZNF485-TMX4 3 1 chr10:43609350:+ chr20:7977624:- . NA TCGA-ZF-AA53-01A-11R-A39I-07 GALNT1-DSCAS 2 4 chr18:35663802:+ chr18:31150799:+ . NA TCGA-ZF-AA53-01A-11R-A39I-07 NEURL3-FAM178B 1 4 chr2:96505259:- chr2:96878493:- FRAMESHIFT NA TCGA-ZF-AA56-01A-31R-A39I-07 ITSN1-CRYZL1 1 4 chr21:33642713:+ chr21:33624760:- . NA TCGA-ZF-AA58-01A-12R-A42T-07 PALLD-TMEM53 12 86 chr4:168832171:+ chr1:44660295:- . NA TCGA-ZF-AA58-01A-12R-A42T-07 FBXO17-OSBPL6 10 54 chr19:38975586:- chr2:178394313:+ . NA TCGA-ZF-AA58-01A-12R-A42T-07 SAMD4B-FBXO27 7 13 chr19:39357089:+ chr19:39032253:- . NA TCGA-ZF-AA5H-01A-11R-A39I-07 RALA-CAMK2B 62 240 chr7:39623825:+ chr7:44220901:- . NA TCGA-ZF-AA5H-01A-11R-A39I-07 CDK13-DDX56 20 58 chr7:40002031:+ chr7:44570128:- FRAMESHIFT NA TCGA-ZF-AA5H-01A-11R-A39I-07 SMIM7-CACNA1A 13 38 chr19:16659395:- chr19:13255259:- FRAMESHIFT NA TCGA-ZF-AA5H-01A-11R-A39I-07 CBX3-CDK14 6 57 chr7:26211756:+ chr7:91207165:+ . NA TCGA-ZF-AA5H-01A-11R-A39I-07 COG5-FOXP1 4 4 chr7:107548111:- chr3:71493555:- . Likely Oncogenic NA TCGA-ZF-AA5H-01A-11R-A39I-07 PLEKHF1-FBL 3 6 chr19:29665505:+ chr19:39834813:- . NA TCGA-ZF-AA5H-01A-11R-A39I-07 ESYT2-NBPF15 1 7 chr7:158743529:- chr1:144440295:- . NA TCGA-ZF-AA5P-01A-11R-A39I-07 DCAF8-FCRLA 6 25 chr1:160261285:- chr1:161713085:+ . NA TCGA-ZF-AA5P-01A-11R-A39I-07 MAN1A1-IFNGR2 3 5 chr6:119301988:- chr21:33478798:+ INFRAME NA TCGA-ZF-AA5P-01A-11R-A39I-07 PPM1H-DNAJC15 2 7 chr12:62933923:- chr13:43065686:+ . NA TCGA-ZF-AA5P-01A-11R-A39I-07 B4GALT5-MUC22 1 8 chr20:49640478:- chr6:31032196:+ FRAMESHIFT NA TCGA-ZF-AA5P-01A-11R-A39I-07 NRIP1-DECR1 2 3 chr21:15014344:- chr8:90042728:+ . NA TCGA-ZF-AA5P-01A-11R-A39I-07 PPP1R12A-LIN7A 1 2 chr12:79820774:- chr12:80889369:- INFRAME NA TCGA-3C-AAAU-01A-11R-A41B-07 GAB2-CHKA 13 120 chr11:78364016:- chr11:68054047:- . NA TCGA-3C-AAAU-01A-11R-A41B-07 PPFIA1-MS4A5 20 49 chr11:70376600:+ chr11:60447649:+ INFRAME NA TCGA-3C-AAAU-01A-11R-A41B-07 RAB3IP-MSRB3 11 31 chr12:69756663:+ chr12:65488004:+ INFRAME NA TCGA-3C-AAAU-01A-11R-A41B-07 SHROOM3-DCST2 1 43 chr4:76749090:+ chr1:155032768:- FRAMESHIFT NA TCGA-3C-AAAU-01A-11R-A41B-07 CNOT2-SRGAP1 3 18 chr12:70319364:+ chr12:63983947:+ INFRAME NA TCGA-3C-AAAU-01A-11R-A41B-07 RASSF6-LEMD3 3 10 chr4:73593451:- chr12:65245669:+ INFRAME NA TCGA-3C-AAAU-01A-11R-A41B-07 BTC-ZBTB7B 1 17 chr4:74794262:- chr1:155010258:+ . NA TCGA-3C-AAAU-01A-11R-A41B-07 DPY19L2-MRPL1 2 9 chr12:63668057:- chr4:77949797:+ FRAMESHIFT NA TCGA-3C-AAAU-01A-11R-A41B-07 G3BP2-PTPN1 2 6 chr4:75724276:- chr20:50561363:+ . NA TCGA-3C-AAAU-01A-11R-A41B-07 TBC1D15-ANTXR2 2 6 chr12:71873003:+ chr4:80121277:- . NA TCGA-3C-AAAU-01A-11R-A41B-07 SIN3A-CSPG4 1 6 chr15:75451423:- chr15:75693233:- . NA TCGA-3C-AAAU-01A-11R-A41B-07 BCAS4-PHACTR3 1 4 chr20:50795173:+ chr20:59743107:+ FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 IKZF3-PNMT 209 561 chr17:39864120:- chr17:39669629:+ INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 DDX5-RSAD1 72 232 chr17:64499995:- chr17:50479223:+ . NA TCGA-3C-AALI-01A-11R-A41B-07 CWC25-SLC35B1 20 76 chr17:38825166:- chr17:49706334:- FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 PRKCA-RGS9 13 81 chr17:66641466:+ chr17:65225002:+ INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 ACACA-PRKCA 9 66 chr17:37111531:- chr17:66641355:+ INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 CDK12-PLEKHM1P1 13 36 chr17:39463117:+ chr17:64829249:- . Likely Oncogenic NA TCGA-3C-AALI-01A-11R-A41B-07 HELZ-TAF15 7 30 chr17:67128651:- chr17:35817716:+ FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 BPTF-PLXDC1 5 21 chr17:67966656:+ chr17:39087702:- INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 CDK12-FAM20A 5 20 chr17:39471763:+ chr17:68555743:- INFRAME Likely Oncogenic NA TCGA-3C-AALI-01A-11R-A41B-07 STARD3-FAM20A 6 14 chr17:39637231:+ chr17:68551951:- . NA TCGA-3C-AALI-01A-11R-A41B-07 UBE2Z-MRPL45 5 15 chr17:48913021:+ chr17:38306533:+ INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 PSMD12-TLK2 5 9 chr17:67366412:- chr17:62481121:+ . NA TCGA-3C-AALI-01A-11R-A41B-07 TUBD1-MYO18A 4 13 chr17:59890831:- chr17:29074914:- FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 TUBD1-TIAF1 4 13 chr17:59890831:- chr17:29074914:- . NA TCGA-3C-AALI-01A-11R-A41B-07 ARSG-CDK12 6 4 chr17:68356804:+ chr17:39511529:+ INFRAME Likely Oncogenic NA TCGA-3C-AALI-01A-11R-A41B-07 CWC25-PRKAR1A 1 20 chr17:38825166:- chr17:68515394:+ . NA TCGA-3C-AALI-01A-11R-A41B-07 SDF2-MSI2 5 4 chr17:28655287:- chr17:57257098:+ INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 SUPT6H-PRKCA 5 3 chr17:28688218:+ chr17:66496201:+ FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 TEX2-ACSF2 2 8 chr17:64171100:- chr17:50460677:+ FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 SAMD14-DDX42 1 9 chr17:50124917:- chr17:63815563:+ FRAMESHIFT NA TCGA-3C-AALI-01A-11R-A41B-07 STARD3-STXBP4 2 3 chr17:39662344:+ chr17:55072900:+ INFRAME NA TCGA-3C-AALI-01A-11R-A41B-07 DBF4B-LRRC37A11P 1 4 chr17:44750677:+ chr17:39052865:+ . NA TCGA-3C-AALI-01A-11R-A41B-07 FBXL20-PITPNC1 1000 1000 chr17:39401361:- chr17:67692572:+ INFRAME NA TCGA-3C-AALJ-01A-31R-A41B-07 SPO11-GSTA1 4 27 chr20:57335907:+ chr6:52792987:- INFRAME NA TCGA-3C-AALJ-01A-31R-A41B-07 CSE1L-LETM2 3 7 chr20:49046423:+ chr8:38387950:+ . NA TCGA-3C-AALJ-01A-31R-A41B-07 SARNP-BLOC1S1 4 1 chr12:55789075:- chr12:55719091:+ FRAMESHIFT NA TCGA-3C-AALJ-01A-31R-A41B-07 RBM38-DNAJC5B 1 9 chr20:57393333:+ chr8:66056466:+ . NA TCGA-3C-AALJ-01A-31R-A41B-07 TTPA-SNX11 3 1 chr8:63085818:- chr17:48112031:+ . NA TCGA-3C-AALK-01A-11R-A41B-07 RFFL-NLK 6 24 chr17:35089105:- chr17:28168448:+ . NA TCGA-3C-AALK-01A-11R-A41B-07 SKAP1-NR1D1 3 6 chr17:48396680:- chr17:40100266:- . NA TCGA-5L-AAT0-01A-12R-A41B-07 ARHGEF3-LTF 11 35 chr3:56801703:- chr3:46459819:- FRAMESHIFT NA TCGA-5T-A9QA-01A-11R-A41B-07 THAP12-ANO1 16 69 chr11:76380748:- chr11:70170887:+ FRAMESHIFT NA TCGA-5T-A9QA-01A-11R-A41B-07 UVRAG-GDPD4 1 4 chr11:75983513:+ chr11:77287420:- . NA TCGA-A1-A0SB-01A-11R-A144-07 NFIB-HEATR5B 63 276 chr9:14313482:- chr2:36981794:- FRAMESHIFT NA TCGA-A1-A0SB-01A-11R-A144-07 MYB-NFIB 7 114 chr6:135200415:+ chr9:14307520:- INFRAME NA TCGA-A1-A0SB-01A-11R-A144-07 NFIB-STRN 8 16 chr9:14313482:- chr2:36925208:- INFRAME NA TCGA-A1-A0SB-01A-11R-A144-07 EHD4-FSIP1 5 25 chr15:41919210:- chr15:39618245:- INFRAME NA TCGA-A1-A0SB-01A-11R-A144-07 HEATR5B-MYB 5 10 chr2:36988646:- chr6:135201639:+ INFRAME NA TCGA-A1-A0SD-01A-11R-A115-07 PCM1-NAT1 4 7 chr8:17986087:+ chr8:18170679:+ . NA TCGA-A1-A0SD-01A-11R-A115-07 PCM1-SLC6A2 1000 1000 chr8:17986087:+ chr8:18170679:+ . NA TCGA-A1-A0SE-01A-11R-A084-07 PPP1R12A-MGAT4C 12 20 chr12:79845302:- chr12:86049723:- . NA TCGA-A1-A0SE-01A-11R-A084-07 PGM2L1-UVRAG 1 4 chr11:74398051:- chr11:75983387:+ INFRAME NA TCGA-A1-A0SF-01A-11R-A144-07 IGF1R-WDR93 4 11 chr15:98708107:+ chr15:89701707:+ . NA TCGA-A1-A0SG-01A-11R-A144-07 ENPP1-SEC63 3 0 chr6:131886724:+ chr6:107924932:- FRAMESHIFT NA TCGA-A1-A0SH-01A-11R-A084-07 CDC27-ST7L 2 45 chr17:47189146:- chr1:112600848:- FRAMESHIFT NA TCGA-A1-A0SH-01A-11R-A084-07 CNN3-ALG14 4 7 chr1:94926838:- chr1:95027260:- INFRAME NA TCGA-A1-A0SH-01A-11R-A084-07 COL1A1-HSP90AB1 1 12 chr17:50197732:- chr6:44250021:+ FRAMESHIFT NA TCGA-A1-A0SJ-01A-11R-A084-07 UVRAG-INTS4 41 125 chr11:75912039:+ chr11:77907810:- INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 TANC2-CHD6 40 69 chr17:63009626:+ chr20:41457428:- FRAMESHIFT NA TCGA-A1-A0SJ-01A-11R-A084-07 LAMA5-MYRFL 22 58 chr20:62362400:- chr12:69879028:+ FRAMESHIFT NA TCGA-A1-A0SJ-01A-11R-A084-07 WNT11-TSPAN8 10 15 chr11:76206325:- chr12:71157787:- . NA TCGA-A1-A0SJ-01A-11R-A084-07 ARHGAP42-PGR 8 17 chr11:100687832:+ chr11:101062752:- INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 ADNP-GHRH 5 26 chr20:50930826:- chr20:37256908:- . NA TCGA-A1-A0SJ-01A-11R-A084-07 BCAS3-NFS1 6 16 chr17:61034790:+ chr20:35674617:- INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 ZFP91-NOX4 3 15 chr11:58584884:+ chr11:89355043:- INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 DTX4-CCDC102B 4 10 chr11:59192250:+ chr18:69054030:+ INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 ADNP-SYCP2 2 12 chr20:50902017:- chr20:59893593:- INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 ZFC3H1-CDH4 3 5 chr12:71619315:- chr20:61852754:+ FRAMESHIFT NA TCGA-A1-A0SJ-01A-11R-A084-07 ERAL1-DIDO1 1 9 chr17:28855317:+ chr20:62882414:- INFRAME NA TCGA-A1-A0SJ-01A-11R-A084-07 KIZ-ABHD13 1 5 chr20:21132159:+ chr13:108229199:+ . NA TCGA-A1-A0SJ-01A-11R-A084-07 INTS4-PTPRT 1 3 chr11:77955942:- chr20:42885932:- INFRAME Likely Oncogenic NA TCGA-A1-A0SJ-01A-11R-A084-07 FAM160B1-FANK1 1 2 chr10:114846367:+ chr10:125973373:+ . NA TCGA-A1-A0SK-01A-12R-A084-07 KDM5A-ANO2 98 280 chr12:318106:- chr12:5599629:- INFRAME NA TCGA-A1-A0SK-01A-12R-A084-07 IP6K2-PRKAR2A 113 113 chr3:48717157:- chr3:48765349:- . NA TCGA-A1-A0SK-01A-12R-A084-07 SRF-F5 31 93 chr6:43174113:+ chr1:169514459:- INFRAME NA TCGA-A1-A0SK-01A-12R-A084-07 CHD4-DTX1 20 46 chr12:6581044:- chr12:113077424:+ INFRAME NA TCGA-A1-A0SK-01A-12R-A084-07 PIK3C2G-PPFIBP1 3 33 chr12:18399847:+ chr12:27673767:+ INFRAME NA TCGA-A1-A0SK-01A-12R-A084-07 ZBTB7A-APBA3 4 28 chr19:4065430:- chr19:3760301:- . NA TCGA-A1-A0SK-01A-12R-A084-07 HRAS-SCT 4 16 chr11:532631:- chr11:626530:- . NA TCGA-A1-A0SK-01A-12R-A084-07 DIS3L2-SPHKAP 3 18 chr2:232300119:+ chr2:228132085:- INFRAME NA TCGA-A1-A0SK-01A-12R-A084-07 NEBL-TMEM26 1 11 chr10:21020117:- chr10:61416123:- FRAMESHIFT NA TCGA-A1-A0SK-01A-12R-A084-07 OBSCN-IGSF21 2 7 chr1:228215098:+ chr1:18227898:+ INFRAME NA TCGA-A1-A0SK-01A-12R-A084-07 MIPEP-C1QTNF9B 2 1 chr13:23879268:- chr13:23897006:- . NA TCGA-A1-A0SK-01A-12R-A084-07 ADAMTS2-ZNF354C 1 3 chr5:179343767:- chr5:179062015:+ . NA TCGA-A1-A0SK-01A-12R-A084-07 LMO3-EPS8 1 2 chr12:16600655:- chr12:15682972:- . NA TCGA-A1-A0SN-01A-11R-A144-07 KDM2A-MAP3K3 120 461 chr11:67231960:+ chr17:63681766:+ FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 TANC2-STRADA 119 234 chr17:63009626:+ chr17:63728413:- . NA TCGA-A1-A0SN-01A-11R-A144-07 MILR1-KCNJ2 66 270 chr17:64460932:+ chr17:70174824:+ . NA TCGA-A1-A0SN-01A-11R-A144-07 MED13-MILR1 58 181 chr17:62065140:- chr17:64457400:+ FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 RPS6KB1-TEX2 43 140 chr17:59912804:+ chr17:64214242:- . NA TCGA-A1-A0SN-01A-11R-A144-07 TUBD1-CDK12 15 174 chr17:59866609:- chr17:39511529:+ FRAMESHIFT Likely Oncogenic NA TCGA-A1-A0SN-01A-11R-A144-07 DDX42-RPS6KB1 35 86 chr17:63805175:+ chr17:59910562:+ INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 PSMD3-C11orf80 19 119 chr17:39981190:+ chr11:66759043:+ INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 MED13-KCNJ2 25 63 chr17:62065140:- chr17:70174824:+ . NA TCGA-A1-A0SN-01A-11R-A144-07 CADPS2-LMOD2 26 34 chr7:122885999:- chr7:123661860:+ INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 TLK2-KCNJ16 5 92 chr17:62481206:+ chr17:70100658:+ . NA TCGA-A1-A0SN-01A-11R-A144-07 RHOD-PFDN4 13 32 chr11:67066847:+ chr20:54214351:+ INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 SND1-GRM8 9 23 chr7:127721400:+ chr7:126904683:- FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 APPBP2-HEATR6 7 19 chr17:60451880:- chr17:60057403:- INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 VMP1-KDM2A 5 5 chr17:59773885:+ chr11:67180079:+ INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 VMP1-AP1S2 5 4 chr17:59738947:+ chrX:15831568:- INFRAME NA TCGA-A1-A0SN-01A-11R-A144-07 CCDC47-GH1 1 18 chr17:63760914:- chr17:63918506:- FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 CABLES1-RBBP8 4 3 chr18:23136607:+ chr18:22989221:+ FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 RBM4-MTMR4 3 6 chr11:66640123:+ chr17:58496330:- FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 TRRAP-PRKAR2B 2 8 chr7:98917679:+ chr7:107121952:+ FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 PILRB-MAGI2 1 9 chr7:100356883:+ chr7:78195063:- FRAMESHIFT NA TCGA-A1-A0SN-01A-11R-A144-07 INTS2-AXIN2 2 3 chr17:61911940:- chr17:65558736:- . Likely Oncogenic NA TCGA-A1-A0SN-01A-11R-A144-07 TBL1X-CASK 1 6 chrX:9501849:+ chrX:41853227:- . NA TCGA-A1-A0SN-01A-11R-A144-07 NFATC2-MED24 1000 1000 chr20:51391084:- chr17:40054695:- . NA TCGA-A1-A0SO-01A-22R-A084-07 UBE2Q1-HPS1 26 40 chr1:154558227:- chr10:98427264:- FRAMESHIFT NA TCGA-A1-A0SO-01A-22R-A084-07 HPCAL1-CPSF3 18 48 chr2:10396920:+ chr2:9467707:+ . NA TCGA-A1-A0SO-01A-22R-A084-07 VPS53-HS3ST5 12 37 chr17:697418:- chr6:114168462:- . NA TCGA-A1-A0SO-01A-22R-A084-07 DIXDC1-GAB2 10 33 chr11:111937559:+ chr11:78280901:- INFRAME NA TCGA-A1-A0SO-01A-22R-A084-07 TRIP12-AGFG1 12 23 chr2:229921880:- chr2:227536901:+ . NA TCGA-A1-A0SO-01A-22R-A084-07 DDX39B-ATP6V1G2 9 9 chr6:31530921:- chr6:31545766:- . NA TCGA-A1-A0SO-01A-22R-A084-07 HDAC2-RSPO3 7 2 chr6:113970857:- chr6:127148648:+ INFRAME NA TCGA-A1-A0SO-01A-22R-A084-07 GDF11-BLOC1S1 4 11 chr12:55743761:+ chr12:55719091:+ INFRAME NA TCGA-A1-A0SO-01A-22R-A084-07 PGBD2-KIRREL3 6 2 chr1:248906342:+ chr11:126473466:- . NA TCGA-A1-A0SO-01A-22R-A084-07 CNOT1-RASSF8 3 12 chr16:58629728:- chr12:26064498:+ . NA TCGA-A1-A0SO-01A-22R-A084-07 SBK1-BCAR4 1 13 chr16:28293300:+ chr16:11821755:- . NA TCGA-A1-A0SO-01A-22R-A084-07 CDC42BPB-UNC79 2 8 chr14:103056999:- chr14:93467671:+ INFRAME NA TCGA-A1-A0SO-01A-22R-A084-07 CCDC28A-WASF2 3 1 chr6:138776278:+ chr1:27428933:- . NA TCGA-A1-A0SO-01A-22R-A084-07 PIGZ-MELTF 2 5 chr3:196968687:- chr3:197006736:- . NA TCGA-A1-A0SO-01A-22R-A084-07 C2CD2-ZBTB21 2 4 chr21:41912332:- chr21:42002961:- . NA TCGA-A1-A0SO-01A-22R-A084-07 KHDC1-NLK 2 3 chr6:73291998:- chr17:28122603:+ INFRAME NA TCGA-A1-A0SO-01A-22R-A084-07 NHLRC2-ATRNL1 2 1 chr10:113858680:+ chr10:115727248:+ FRAMESHIFT NA TCGA-A1-A0SO-01A-22R-A084-07 ERC2-ARHGEF3 1 4 chr3:56434351:- chr3:56882354:- INFRAME NA TCGA-A1-A0SO-01A-22R-A084-07 ITSN1-KIAA1211 1 4 chr21:33642713:+ chr4:56179284:+ . NA TCGA-A1-A0SO-01A-22R-A084-07 ADAP1-NDUFAF6 1 3 chr7:954396:- chr8:95031995:+ FRAMESHIFT NA TCGA-A1-A0SO-01A-22R-A084-07 NAALADL2-SLC25A3 1 2 chr3:174864090:+ chr12:98597856:+ . NA TCGA-A1-A0SP-01A-11R-A084-07 FBXW7-MGST2 7 15 chr4:152346930:- chr4:139740212:+ . Likely Oncogenic NA TCGA-A1-A0SP-01A-11R-A084-07 BICDL1-IGKV1D-27 10 0 chr12:120093890:+ chr2:89969155:+ . NA TCGA-A1-A0SP-01A-11R-A084-07 NUBP1-UMODL1 3 15 chr16:10758027:+ chr21:42088294:+ INFRAME NA TCGA-A1-A0SP-01A-11R-A084-07 BORCS5-CCDC91 1 15 chr12:12357509:+ chr12:28259364:+ FRAMESHIFT NA TCGA-A1-A0SP-01A-11R-A084-07 TXN2-CABP2 1 6 chr22:36480575:- chr11:67521982:- FRAMESHIFT NA TCGA-A1-A0SP-01A-11R-A084-07 GULP1-NUP35 1 5 chr2:188383889:+ chr2:183128287:+ . NA TCGA-A1-A0SQ-01A-21R-A144-07 LRP5-MOGAT2 16 136 chr11:68426187:+ chr11:75719992:+ INFRAME NA TCGA-A1-A0SQ-01A-21R-A144-07 THAP12-MARK4 7 111 chr11:76360956:- chr19:45264684:+ FRAMESHIFT NA TCGA-A1-A0SQ-01A-21R-A144-07 ZNF154-KIR2DL1 6 70 chr19:57704853:- chr19:54773333:+ INFRAME NA TCGA-A1-A0SQ-01A-21R-A144-07 PPP6R3-POLD3 6 68 chr11:68460827:+ chr11:74594061:+ . NA TCGA-A1-A0SQ-01A-21R-A144-07 SPINT2-PAK1 11 33 chr19:38264998:+ chr11:77374365:- INFRAME NA TCGA-A1-A0SQ-01A-21R-A144-07 MARK4-LYPD5 6 35 chr19:45294452:+ chr19:43799834:- FRAMESHIFT NA TCGA-A1-A0SQ-01A-21R-A144-07 INTS4-PLAUR 4 22 chr11:77901421:- chr19:43656640:- FRAMESHIFT NA TCGA-A1-A0SQ-01A-21R-A144-07 ZNF814-IRF3 4 21 chr19:57876916:- chr19:49659833:- INFRAME NA TCGA-A1-A0SQ-01A-21R-A144-07 CCDC106-CD37 2 27 chr19:55649584:+ chr19:49335714:+ FRAMESHIFT NA TCGA-A1-A0SQ-01A-21R-A144-07 PLAUR-AAMDC 2 21 chr19:43670066:- chr11:77918061:+ FRAMESHIFT NA TCGA-A1-A0SQ-01A-21R-A144-07 TENM4-NARS2 5 8 chr11:78962143:- chr11:78528936:- . NA TCGA-A1-A0SQ-01A-21R-A144-07 ARFGAP1-SPAG4 2 18 chr20:63272920:+ chr20:35619195:+ . NA TCGA-A1-A0SQ-01A-21R-A144-07 ZNF180-TOMM40 1 15 chr19:44497284:- chr19:44903030:+ FRAMESHIFT NA TCGA-A1-A0SQ-01A-21R-A144-07 ZNF671-PRRG2 3 3 chr19:57727391:- chr19:49588497:+ FRAMESHIFT NA TCGA-A2-A04P-01A-31R-A034-07 EIF2AK2-CEBPZ 71 157 chr2:37122506:- chr2:37201903:- FRAMESHIFT NA TCGA-A2-A04P-01A-31R-A034-07 PDE7A-TRIM55 15 72 chr8:65841371:- chr8:66149645:+ INFRAME NA TCGA-A2-A04P-01A-31R-A034-07 IPO8-CDH13 3 69 chr12:30656684:- chr16:83180870:+ FRAMESHIFT NA TCGA-A2-A04P-01A-31R-A034-07 ARHGEF19-ANO7L1 5 13 chr1:16206948:- chr1:16216061:- . NA TCGA-A2-A04P-01A-31R-A034-07 MPLKIP-TRA2A 1 6 chr7:40134229:- chr7:23516528:- FRAMESHIFT NA TCGA-A2-A04P-01A-31R-A034-07 DUS1L-RPL13A 2 1 chr17:82058781:- chr19:49491040:+ INFRAME NA TCGA-A2-A04P-01A-31R-A034-07 EYA3-POP4 1 4 chr1:27988535:- chr19:29613871:+ INFRAME NA TCGA-A2-A04P-01A-31R-A034-07 WDR45B-RAB40B 1 4 chr17:82643949:- chr17:82664556:- INFRAME NA TCGA-A2-A04Q-01A-21R-A034-07 SMG1-MYH11 45 123 chr16:18832943:- chr16:15704126:- . NA TCGA-A2-A04Q-01A-21R-A034-07 NETO2-CHD9 1 18 chr16:47122657:- chr16:53121300:+ . NA TCGA-A2-A04T-01A-21R-A034-07 ZNF462-DNAJC1 10 39 chr9:106863355:+ chr10:21806099:- . NA TCGA-A2-A04T-01A-21R-A034-07 MKL2-SNX29 11 18 chr16:14240484:+ chr16:12027320:+ INFRAME NA TCGA-A2-A04T-01A-21R-A034-07 XPR1-KIAA1614 6 12 chr1:180632270:+ chr1:180938555:+ FRAMESHIFT NA TCGA-A2-A04T-01A-21R-A034-07 KIAA0319L-YTHDF2 5 5 chr1:35470863:- chr1:28768929:+ INFRAME NA TCGA-A2-A04T-01A-21R-A034-07 SCNN1G-COL27A1 2 16 chr16:23197427:+ chr9:114162715:+ FRAMESHIFT NA TCGA-A2-A04T-01A-21R-A034-07 TCF12-TEX9 1 17 chr15:56921098:+ chr15:56365579:+ FRAMESHIFT NA TCGA-A2-A04T-01A-21R-A034-07 CNTLN-COQ8B 4 2 chr9:17143376:+ chr19:40714635:- . NA TCGA-A2-A04T-01A-21R-A034-07 SENP6-SLC35A1 2 7 chr6:75602576:+ chr6:87500508:+ FRAMESHIFT NA TCGA-A2-A04T-01A-21R-A034-07 CSNK1D-SECTM1 1 3 chr17:82248875:- chr17:82327292:- . NA TCGA-A2-A04U-01A-11R-A115-07 ELL-SMIM7 17 94 chr19:18521921:- chr19:16647261:- FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 MDH1-COMMD1 10 97 chr2:63594586:+ chr2:62000701:+ INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 MSH2-SLC3A1 17 42 chr2:47410372:+ chr2:44312586:+ INFRAME Likely Oncogenic NA TCGA-A2-A04U-01A-11R-A115-07 PSD3-PAGE4 10 41 chr8:19013563:- chrX:49830399:+ . NA TCGA-A2-A04U-01A-11R-A115-07 DOCK1-PLPP4 4 64 chr10:126990603:+ chr10:120503818:+ INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 MYLK-CCDC14 7 31 chr3:123793677:- chr3:123897613:- FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 LSM14A-FXYD3 7 20 chr19:34215661:+ chr19:35119168:+ INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 INSIG1-DPP6 7 13 chr7:155302846:+ chr7:154566842:+ INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 FGF13-NLRP3 5 17 chrX:138857512:- chr1:247448405:+ FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 NAA25-TBX5 6 13 chr12:112081060:- chr12:114356106:- FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 POGZ-GBA 4 16 chr1:151423397:- chr1:155241180:- . NA TCGA-A2-A04U-01A-11R-A115-07 NFIC-WDR18 4 12 chr19:3425177:+ chr19:989762:+ FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 RWDD3-CCDC18 3 15 chr1:95239909:+ chr1:93246105:+ . NA TCGA-A2-A04U-01A-11R-A115-07 MYH9-PLA2G6 4 10 chr22:36387807:- chr22:38169471:- . NA TCGA-A2-A04U-01A-11R-A115-07 BCAT1-ITPR2 3 9 chr12:24948927:- chr12:26340328:- INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 PDE7A-COPS5 3 9 chr8:65724255:- chr8:67045960:- FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 SMG6-NXN 3 9 chr17:2172658:- chr17:801131:- INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 URB1-TMEM50B 3 7 chr21:32363156:- chr21:33432802:- . NA TCGA-A2-A04U-01A-11R-A115-07 TRAPPC9-TSTA3 3 6 chr8:139885879:- chr8:143614915:- FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 CELF1-TYRL 2 9 chr11:47565274:- chr11:49405314:- . NA TCGA-A2-A04U-01A-11R-A115-07 ATP2B2-CIDECP 1 12 chr3:10534039:- chr3:10023747:- . NA TCGA-A2-A04U-01A-11R-A115-07 PTBP2-CASQ1 3 4 chr1:96806958:+ chr1:160195012:+ FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 MAGI3-RAP1A 2 7 chr1:113391349:+ chr1:111703336:+ FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 PRLR-KDM3B 1 9 chr5:35230268:- chr5:138372674:+ . NA TCGA-A2-A04U-01A-11R-A115-07 TIAL1-CUZD1 1 9 chr10:119596434:- chr10:122846220:- . NA TCGA-A2-A04U-01A-11R-A115-07 DCK-UGT2B25P 2 4 chr4:70998182:+ chr4:69401804:+ . NA TCGA-A2-A04U-01A-11R-A115-07 MOB1B-UGT2B25P 2 4 chr4:70998182:+ chr4:69401804:+ . NA TCGA-A2-A04U-01A-11R-A115-07 UQCC1-KIAA1755 2 4 chr20:35366557:- chr20:38228240:- INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 CHRM3-ERICH6 1 6 chr1:239632286:+ chr3:150660155:- . NA TCGA-A2-A04U-01A-11R-A115-07 ABI2-FAM117B 1 5 chr2:203417081:+ chr2:202695881:+ INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 ZNF236-RFX3 1 4 chr18:76947652:+ chr9:3228889:- INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 GOLGA4-STAC 1 1 chr3:37355187:+ chr3:36443364:+ INFRAME NA TCGA-A2-A04U-01A-11R-A115-07 ITSN2-HADHA 1 1 chr2:24270671:- chr2:26215175:- FRAMESHIFT NA TCGA-A2-A04U-01A-11R-A115-07 FAM3C-CADPS2 1000 1000 chr7:121396162:- chr7:122325581:- . NA TCGA-A2-A04V-01A-21R-A034-07 MAP7-ECHDC1 19 36 chr6:136550342:- chr6:127290277:- FRAMESHIFT NA TCGA-A2-A04V-01A-21R-A034-07 SHANK2-MYEOV 3 11 chr11:70659828:- chr11:69341510:+ . NA TCGA-A2-A04V-01A-21R-A034-07 RNF217-PRDM1 2 9 chr6:124963426:+ chr6:106104825:+ INFRAME Likely Oncogenic NA TCGA-A2-A04V-01A-21R-A034-07 PRDM1-SLC22A16 1 5 chr6:106106499:+ chr6:110457017:- FRAMESHIFT Likely Oncogenic NA TCGA-A2-A04W-01A-31R-A115-07 SLC35B1-IGFBP4 36 106 chr17:49706965:- chr17:40452985:+ INFRAME NA TCGA-A2-A04W-01A-31R-A115-07 NPEPPS-FAM117A 37 39 chr17:47545993:+ chr17:49732720:- INFRAME NA TCGA-A2-A04W-01A-31R-A115-07 PREP-DCBLD1 9 36 chr6:105323665:- chr6:117503767:+ INFRAME NA TCGA-A2-A04W-01A-31R-A115-07 TTC6-FAM131C 6 31 chr14:37739155:+ chr1:16062534:- FRAMESHIFT NA TCGA-A2-A04W-01A-31R-A115-07 SSH2-SLC35B1 5 26 chr17:29630780:- chr17:49701510:- INFRAME NA TCGA-A2-A04W-01A-31R-A115-07 RARA-CDK12 5 24 chr17:40318448:+ chr17:39490557:+ . Likely Oncogenic NA TCGA-A2-A04W-01A-31R-A115-07 WIPF2-CDK12 5 8 chr17:40265146:+ chr17:39544249:+ INFRAME Likely Oncogenic NA TCGA-A2-A04W-01A-31R-A115-07 ACOT7-TTC34 2 10 chr1:6393257:- chr1:2645563:- FRAMESHIFT NA TCGA-A2-A04W-01A-31R-A115-07 MAN1A1-ARHGAP18 2 10 chr6:119290683:- chr6:129618852:- INFRAME NA TCGA-A2-A04W-01A-31R-A115-07 MAN1A1-LCOR 2 3 chr6:119306896:- chr10:96907265:+ . NA TCGA-A2-A04W-01A-31R-A115-07 MED23-BEND3 2 3 chr6:131624865:- chr6:107099296:- . NA TCGA-A2-A04W-01A-31R-A115-07 SLC35B1-CORO6 1 4 chr17:49702858:- chr17:29621484:- . NA TCGA-A2-A04W-01A-31R-A115-07 ARFGEF3-TAAR6 1000 1000 chr6:138317319:+ chr6:132570322:+ FRAMESHIFT NA TCGA-A2-A04X-01A-21R-A034-07 MYO1D-SSH2 13 8 chr17:32653843:- chr17:29848929:- INFRAME NA TCGA-A2-A04X-01A-21R-A034-07 ZNF587-ZSCAN4 12 8 chr19:57850071:+ chr19:57676041:+ . NA TCGA-A2-A04X-01A-21R-A034-07 SNX27-ADAR 5 30 chr1:151639119:+ chr1:154602626:- INFRAME NA TCGA-A2-A04X-01A-21R-A034-07 MYO1D-FCMR 5 13 chr17:32653843:- chr1:206905147:- INFRAME NA TCGA-A2-A04Y-01A-21R-A034-07 DCAF13-CASC8 97 410 chr8:103421082:+ chr8:127290060:- . NA TCGA-A2-A04Y-01A-21R-A034-07 PVT1-RGS22 37 154 chr8:127939676:+ chr8:100008569:- . NA TCGA-A2-A04Y-01A-21R-A034-07 LRP12-VPS13B 11 10 chr8:104588819:- chr8:99013760:+ . NA TCGA-A2-A04Y-01A-21R-A034-07 GSK3B-LSAMP 1 4 chr3:119905755:- chr3:116444955:- FRAMESHIFT NA TCGA-A2-A0CK-01A-11R-A22K-07 ANKHD1-TIAM2 2 11 chr5:140449305:+ chr6:155244011:+ INFRAME NA TCGA-A2-A0CL-01A-11R-A115-07 CLSTN2-PCOLCE2 36 184 chr3:140566210:+ chr3:142821045:- INFRAME NA TCGA-A2-A0CL-01A-11R-A115-07 PLS1-CLDN18 4 109 chr3:142596509:+ chr3:138023658:+ . NA TCGA-A2-A0CL-01A-11R-A115-07 RPS6KB2-VSIR 12 30 chr11:67428623:+ chr10:71755466:- FRAMESHIFT NA TCGA-A2-A0CL-01A-11R-A115-07 ANK3-CDK1 6 14 chr10:60134271:- chr10:60780141:+ . NA TCGA-A2-A0CL-01A-11R-A115-07 COL25A1-MCUB 6 13 chr4:108841695:- chr4:109648484:+ . NA TCGA-A2-A0CL-01A-11R-A115-07 GK5-MBNL1 7 8 chr3:142213526:- chr3:152414941:+ FRAMESHIFT NA TCGA-A2-A0CL-01A-11R-A115-07 TACC2-MICU1 5 12 chr10:121989488:+ chr10:72375872:- . NA TCGA-A2-A0CL-01A-11R-A115-07 GAB2-THRSP 4 14 chr11:78280601:- chr11:78067659:+ . NA TCGA-A2-A0CL-01A-11R-A115-07 GRK2-POLD4 1 12 chr11:67266812:+ chr11:67353077:- FRAMESHIFT NA TCGA-A2-A0CL-01A-11R-A115-07 ATR-DBR1 2 5 chr3:142578646:- chr3:138173626:- INFRAME Likely Oncogenic NA TCGA-A2-A0CL-01A-11R-A115-07 CRLS1-CES5A 2 5 chr20:6034555:+ chr16:55869744:- FRAMESHIFT NA TCGA-A2-A0CL-01A-11R-A115-07 ARHGAP10-SPATA5 1 4 chr4:147857654:+ chr4:123313888:+ INFRAME NA TCGA-A2-A0CL-01A-11R-A115-07 INTS4-GAB2 1 4 chr11:77883832:- chr11:78227051:- FRAMESHIFT NA TCGA-A2-A0CL-01A-11R-A115-07 ABCC2-TSPAN14 1 2 chr10:99792359:+ chr10:80504728:+ INFRAME NA TCGA-A2-A0CM-01A-31R-A034-07 UBE3C-DNAJB6 3 47 chr7:157163863:+ chr7:157363161:+ FRAMESHIFT NA TCGA-A2-A0CM-01A-31R-A034-07 VGLL4-FXR1 3 17 chr3:11702971:- chr3:180933334:+ FRAMESHIFT NA TCGA-A2-A0CM-01A-31R-A034-07 PPP2R3A-PCCB 3 10 chr3:135965849:+ chr3:136255856:+ . NA TCGA-A2-A0CM-01A-31R-A034-07 SMG1-RPS15A 2 1 chr16:18925950:- chr16:18789118:- . NA TCGA-A2-A0CT-01A-31R-A056-07 ATP2A3-FGF3 38 108 chr17:3929328:- chr11:69810700:- INFRAME NA TCGA-A2-A0CT-01A-31R-A056-07 ARHGAP44-DNAH2 2 12 chr17:12789891:+ chr17:7801578:+ INFRAME NA TCGA-A2-A0CT-01A-31R-A056-07 RANGRF-LRP5 1 13 chr17:8289414:+ chr11:68409914:+ INFRAME NA TCGA-A2-A0CT-01A-31R-A056-07 SYCP2-ZMYND8 1 10 chr20:59891990:- chr20:47298947:- INFRAME NA TCGA-A2-A0CT-01A-31R-A056-07 LRP5-C11orf80 1 2 chr11:68416527:+ chr11:66759043:+ FRAMESHIFT NA TCGA-A2-A0CU-01A-12R-A034-07 PHB-LSM1 69 141 chr17:49413177:- chr8:38172033:- INFRAME NA TCGA-A2-A0CU-01A-12R-A034-07 MLLT3-SLC28A3 1 8 chr9:20456704:- chr9:84313454:- INFRAME NA TCGA-A2-A0CU-01A-12R-A034-07 FGD3-NOL8 2 2 chr9:93022389:+ chr9:92324209:- . NA TCGA-A2-A0CU-01A-12R-A034-07 PABPC1-CNGB3 2 2 chr8:100704297:- chr8:86611671:- . NA TCGA-A2-A0CW-01A-21R-A115-07 CBX3-GARS 292 717 chr7:26201826:+ chr7:30626234:+ . NA TCGA-A2-A0CW-01A-21R-A115-07 THRB-LMCD1 11 33 chr3:24143501:- chr3:8532737:+ INFRAME NA TCGA-A2-A0CW-01A-21R-A115-07 KCNN3-DCST2 7 19 chr1:154822089:- chr1:155026715:- FRAMESHIFT NA TCGA-A2-A0CW-01A-21R-A115-07 CAB39L-EXOSC8 7 4 chr13:49344179:- chr13:37002488:+ INFRAME NA TCGA-A2-A0CW-01A-21R-A115-07 SLC37A1-NT5C3A 2 19 chr21:42554142:+ chr7:33017601:- FRAMESHIFT NA TCGA-A2-A0CW-01A-21R-A115-07 DYRK1A-BRWD1 2 12 chr21:37420384:+ chr21:39202545:- FRAMESHIFT NA TCGA-A2-A0CW-01A-21R-A115-07 PAK4-CYP2A6 3 5 chr19:39125919:+ chr19:40848763:- . NA TCGA-A2-A0CW-01A-21R-A115-07 BRWD1-DYRK1A 1 12 chr21:39212666:- chr21:37472684:+ FRAMESHIFT NA TCGA-A2-A0CW-01A-21R-A115-07 DCLK1-RCBTB1 1 6 chr13:35871224:- chr13:49534262:- FRAMESHIFT NA TCGA-A2-A0CW-01A-21R-A115-07 RAPGEF5-NPY 1 4 chr7:22125604:- chr7:24289499:+ FRAMESHIFT NA TCGA-A2-A0CX-01A-21R-A00Z-07 NOL7-ERVFRD-1 61 261 chr6:13617801:+ chr6:11105630:- . NA TCGA-A2-A0CX-01A-21R-A00Z-07 HIVEP1-OFCC1 15 13 chr6:12008875:+ chr6:10159499:- . NA TCGA-A2-A0CX-01A-21R-A00Z-07 SEC16A-LHX3 6 47 chr9:136468415:- chr9:136200753:- INFRAME NA TCGA-A2-A0CX-01A-21R-A00Z-07 PSMD3-EPOP 6 42 chr17:39986712:+ chr17:38673251:- . NA TCGA-A2-A0CX-01A-21R-A00Z-07 CACNA2D3-FOXP1 11 18 chr3:54764351:+ chr3:71001059:- FRAMESHIFT Likely Oncogenic NA TCGA-A2-A0CX-01A-21R-A00Z-07 FAM19A4-CACNA2D3 5 13 chr3:68932240:- chr3:54752599:+ . NA TCGA-A2-A0CX-01A-21R-A00Z-07 PRR11-IKZF3 3 18 chr17:59169880:+ chr17:39765148:- . NA TCGA-A2-A0CX-01A-21R-A00Z-07 GRB7-ITGB3 3 10 chr17:39744207:+ chr17:47274419:+ FRAMESHIFT NA TCGA-A2-A0CX-01A-21R-A00Z-07 RIMKLB-CLEC4D 4 4 chr12:8714041:+ chr12:8515236:+ INFRAME NA TCGA-A2-A0CX-01A-21R-A00Z-07 OFCC1-SSR1 1 9 chr6:9768931:- chr6:7310029:- FRAMESHIFT NA TCGA-A2-A0D0-01A-11R-A00Z-07 WBP11-MGP 22 312 chr12:14793731:- chr12:14885850:- . NA TCGA-A2-A0D0-01A-11R-A00Z-07 TYK2-CDC37 12 123 chr19:10378214:- chr19:10393441:- FRAMESHIFT NA TCGA-A2-A0D0-01A-11R-A00Z-07 TMEM87B-MERTK 12 19 chr2:112055756:+ chr2:111994251:+ INFRAME NA TCGA-A2-A0D0-01A-11R-A00Z-07 SCARB2-STAU2 6 31 chr4:76195707:- chr8:73582830:- FRAMESHIFT NA TCGA-A2-A0D0-01A-11R-A00Z-07 LRP5-ALG1L8P 7 13 chr11:68348243:+ chr11:67785273:+ . NA TCGA-A2-A0D0-01A-11R-A00Z-07 RALGPS1-TYRP1 6 13 chr9:126965951:+ chr9:12693912:+ . NA TCGA-A2-A0D0-01A-11R-A00Z-07 CD44-CASC11 7 8 chr11:35190065:+ chr8:127733959:- . NA TCGA-A2-A0D0-01A-11R-A00Z-07 KIAA1755-HS6ST2 3 11 chr20:38223538:- chrX:132629093:- FRAMESHIFT NA TCGA-A2-A0D0-01A-11R-A00Z-07 VAMP7-TGFB2 4 1 chrX:155900587:+ chr1:218405169:+ INFRAME NA TCGA-A2-A0D0-01A-11R-A00Z-07 SPHK2-CGB7 2 5 chr19:48620553:+ chr19:49055008:- INFRAME NA TCGA-A2-A0D0-01A-11R-A00Z-07 LPAR3-ST6GALNAC3 1 7 chr1:84865385:- chr1:76627452:+ FRAMESHIFT NA TCGA-A2-A0D0-01A-11R-A00Z-07 RALGPS2-RASAL2 2 2 chr1:178785607:+ chr1:178283564:+ FRAMESHIFT NA TCGA-A2-A0D1-01A-11R-A034-07 HOOK3-IKBKB 5 53 chr8:42943445:+ chr8:42305187:+ INFRAME NA TCGA-A2-A0D1-01A-11R-A034-07 DDX52-ARL17B 4 31 chr17:37633288:- chr17:46339774:- FRAMESHIFT NA TCGA-A2-A0D1-01A-11R-A034-07 PPP1R1B-PIPOX 3 12 chr17:39636004:+ chr17:29052920:+ . NA TCGA-A2-A0D1-01A-11R-A034-07 RARA-POLDIP2 1 10 chr17:40331396:+ chr17:28354585:- FRAMESHIFT NA TCGA-A2-A0D1-01A-11R-A034-07 USP42-GLCCI1 1 4 chr7:6150506:+ chr7:8003908:+ FRAMESHIFT NA TCGA-A2-A0D1-01A-11R-A034-07 TAOK3-FAM60A 1 1 chr12:118372648:- chr12:31298224:- . NA TCGA-A2-A0D2-01A-21R-A034-07 ELP2-MAPRE2 59 198 chr18:36154999:+ chr18:35101946:+ INFRAME NA TCGA-A2-A0D2-01A-21R-A034-07 STK40-MDM4 12 35 chr1:36341099:- chr1:204556648:+ . NA TCGA-A2-A0D2-01A-21R-A034-07 RPS15A-ARL6IP1 5 24 chr16:18784738:- chr16:18798834:- INFRAME NA TCGA-A2-A0D2-01A-21R-A034-07 SPSB3-MEIOB 3 30 chr16:1781358:- chr16:1862116:- INFRAME NA TCGA-A2-A0D2-01A-21R-A034-07 TMTC4-FGF14 3 5 chr13:100625535:- chr13:101875296:- FRAMESHIFT NA TCGA-A2-A0D2-01A-21R-A034-07 XXYLT1-ACAP2 3 2 chr3:195156449:- chr3:195392147:- INFRAME NA TCGA-A2-A0D2-01A-21R-A034-07 TFB2M-SMYD3 1 5 chr1:246556573:- chr1:246335474:- INFRAME NA TCGA-A2-A0D2-01A-21R-A034-07 KDM2A-FBXO3 1 4 chr11:67181892:+ chr11:33770830:- FRAMESHIFT NA TCGA-A2-A0D2-01A-21R-A034-07 SRRD-MST1 1 3 chr22:26486063:+ chr3:49684656:- FRAMESHIFT NA TCGA-A2-A0D4-01A-11R-A00Z-07 RARA-PCTP 15 98 chr17:40318448:+ chr17:55771106:+ . NA TCGA-A2-A0D4-01A-11R-A00Z-07 TMEM135-AAMDC 4 29 chr11:87091395:+ chr11:77842479:+ INFRAME NA TCGA-A2-A0D4-01A-11R-A00Z-07 NADSYN1-TRIM9 5 8 chr11:71478469:+ chr14:51025360:- INFRAME NA TCGA-A2-A0D4-01A-11R-A00Z-07 ERBB3-CPB1 1000 1000 chr12:56102834:+ chr3:148841830:+ . NA TCGA-A2-A0D4-01A-11R-A00Z-07 CCDC117-CPB1 1000 1000 chr22:28788981:+ chr3:148854465:+ . NA TCGA-A2-A0EM-01A-11R-A034-07 ARHGEF9-CISD2 3 4 chrX:63754315:- chr4:102885216:+ . NA TCGA-A2-A0EP-01A-52R-A22U-07 HARS-CLINT1 2 4 chr5:140690855:- chr5:157794972:- FRAMESHIFT NA TCGA-A2-A0EP-01A-52R-A22U-07 RAD50-TCOF1 1 5 chr5:132559367:+ chr5:150387902:+ INFRAME Likely Oncogenic NA TCGA-A2-A0EQ-01A-11R-A034-07 CTTN-PSME2 161 88 chr11:70398614:+ chr14:24143671:- . NA TCGA-A2-A0EQ-01A-11R-A034-07 ACER3-NRL 13 62 chr11:76861079:+ chr14:24084745:- . NA TCGA-A2-A0EQ-01A-11R-A034-07 GRHL2-PAGE3 2 9 chr8:101558812:+ chrX:55263359:- INFRAME NA TCGA-A2-A0ER-01A-21R-A034-07 RPS4X-CPB1 1 11 chrX:72275053:- chr3:148844677:+ INFRAME NA TCGA-A2-A0ES-01A-11R-A115-07 KIF13B-TENM4 12 42 chr8:29122591:- chr11:78676387:- INFRAME NA TCGA-A2-A0ES-01A-11R-A115-07 UVRAG-ZMAT4 17 18 chr11:76016980:+ chr8:40532238:- INFRAME NA TCGA-A2-A0ES-01A-11R-A115-07 MPP5-RAD51B 4 11 chr14:67312710:+ chr14:68729808:+ . NA TCGA-A2-A0ES-01A-11R-A115-07 RAP1B-GLIPR1L1 2 2 chr12:68624873:+ chr12:75343693:+ . NA TCGA-A2-A0ET-01A-31R-A034-07 BMPR1B-MCC 7 21 chr4:94996134:+ chr5:113071234:- . NA TCGA-A2-A0ET-01A-31R-A034-07 ATP13A3-LRRC15 1000 1000 chr3:194425342:- chr3:194363412:- . NA TCGA-A2-A0EV-01A-11R-A034-07 ZNF460-ELSPBP1 32 237 chr19:57284677:+ chr19:48014171:+ INFRAME NA TCGA-A2-A0EV-01A-11R-A034-07 ZNF83-PCDH15 17 44 chr19:52635066:- chr10:54664290:- . NA TCGA-A2-A0EV-01A-11R-A034-07 SCAF1-MAP4K1 9 47 chr19:49657889:+ chr19:38587817:- FRAMESHIFT NA TCGA-A2-A0EW-01A-21R-A115-07 TJP2-TMEM38B 4 28 chr9:69230232:+ chr9:105773865:+ INFRAME NA TCGA-A2-A0EW-01A-21R-A115-07 ASTN2-LRRC37A5P 6 15 chr9:117039819:- chr9:111603113:- . NA TCGA-A2-A0EW-01A-21R-A115-07 HSDL2-FRMD3 6 8 chr9:112380180:+ chr9:83389708:- FRAMESHIFT NA TCGA-A2-A0EW-01A-21R-A115-07 BBOF1-RGS6 3 13 chr14:74019534:+ chr14:72454528:+ FRAMESHIFT NA TCGA-A2-A0EW-01A-21R-A115-07 LAMTOR1-NSD3 1 10 chr11:72098289:- chr8:38305445:- FRAMESHIFT NA TCGA-A2-A0EW-01A-21R-A115-07 FNTA-ZMAT4 1 6 chr8:43077364:+ chr8:40825680:- . NA TCGA-A2-A0EW-01A-21R-A115-07 HOOK3-TM2D2 1 5 chr8:42897188:+ chr8:38993660:- INFRAME NA TCGA-A2-A0EX-01A-21R-A034-07 TRPS1-PVT1 1 7 chr8:115668545:- chr8:128096518:+ . NA TCGA-A2-A0EY-01A-11R-A034-07 C19orf25-MED1 32 41 chr19:1478774:- chr17:39447904:- INFRAME NA TCGA-A2-A0EY-01A-11R-A034-07 MED1-TMPRSS9 9 63 chr17:39451038:- chr19:2398795:+ . NA TCGA-A2-A0EY-01A-11R-A034-07 ESRP2-SLC7A6 7 38 chr16:68231178:- chr16:68287746:+ INFRAME NA TCGA-A2-A0EY-01A-11R-A034-07 GPR137C-FERMT2 9 25 chr14:52553591:+ chr14:52864853:- INFRAME NA TCGA-A2-A0EY-01A-11R-A034-07 L2HGDH-LMBRD1 4 35 chr14:50294115:- chr6:69676541:- FRAMESHIFT NA TCGA-A2-A0EY-01A-11R-A034-07 SPECC1-TMEM11 10 10 chr17:20156236:+ chr17:21198840:- FRAMESHIFT NA TCGA-A2-A0EY-01A-11R-A034-07 TRPS1-TBC1D9B 5 20 chr8:115587001:- chr5:179894614:- INFRAME NA TCGA-A2-A0EY-01A-11R-A034-07 SMG1-ANO3 2 27 chr16:18858170:- chr11:26647709:+ INFRAME NA TCGA-A2-A0EY-01A-11R-A034-07 FBXL20-SIRT6 3 4 chr17:39401361:- chr19:4175937:- FRAMESHIFT NA TCGA-A2-A0EY-01A-11R-A034-07 MAPK1IP1L-ARF6 3 4 chr14:55051803:+ chr14:49893256:+ . NA TCGA-A2-A0EY-01A-11R-A034-07 FBXL20-CEP112 2 5 chr17:39402173:- chr17:66030023:- INFRAME NA TCGA-A2-A0ST-01A-12R-A084-07 ZNF333-CYP4F22 7 14 chr19:14695661:+ chr19:15529709:+ FRAMESHIFT NA TCGA-A2-A0ST-01A-12R-A084-07 ATP1A1-NOTCH2 2 25 chr1:116384124:+ chr1:119922778:- FRAMESHIFT NA TCGA-A2-A0ST-01A-12R-A084-07 CMTM8-NR1D2 1 9 chr3:32239119:+ chr3:23954537:+ FRAMESHIFT NA TCGA-A2-A0SU-01A-11R-A084-07 TLN2-FGF7 13 41 chr15:62390685:+ chr15:49483151:+ . NA TCGA-A2-A0SU-01A-11R-A084-07 IQGAP1-AGBL1 1 22 chr15:90390873:+ chr15:86142004:+ FRAMESHIFT NA TCGA-A2-A0SU-01A-11R-A084-07 ZNF18-TASP1 2 9 chr17:11984113:- chr20:13417521:- INFRAME NA TCGA-A2-A0SV-01A-11R-A084-07 NF2-GRAP2 23 74 chr22:29639212:+ chr22:39955819:+ INFRAME Likely Oncogenic NA TCGA-A2-A0SV-01A-11R-A084-07 OSTM1-SNX3 6 28 chr6:108074250:- chr6:108223045:- INFRAME NA TCGA-A2-A0SV-01A-11R-A084-07 CAST-FAM172A 7 21 chr5:96695907:+ chr5:93964523:- INFRAME NA TCGA-A2-A0SW-01A-11R-A084-07 IPPK-ASPN 3 5 chr9:92634386:- chr9:92474927:- . NA TCGA-A2-A0SX-01A-12R-A084-07 LURAP1L-TYRP1 3 6 chr9:12776027:+ chr9:12693912:+ . NA TCGA-A2-A0SX-01A-12R-A084-07 MAML3-CLGN 1 13 chr4:140152860:- chr4:140399040:- INFRAME NA TCGA-A2-A0SX-01A-12R-A084-07 KPNA4-TRIM59 1000 1000 chr3:160521779:- chr3:160439186:- INFRAME NA TCGA-A2-A0SY-01A-31R-A084-07 WDR70-ADAMTS12 6 22 chr5:37605238:+ chr5:33751548:- INFRAME NA TCGA-A2-A0SY-01A-31R-A084-07 CA10-TTC25 5 4 chr17:51930990:- chr17:41945136:+ FRAMESHIFT NA TCGA-A2-A0T0-01A-22R-A084-07 SPECC1L-BCRP1 10 33 chr22:24276803:+ chr22:24260901:- . NA TCGA-A2-A0T0-01A-22R-A084-07 UBAP2-FAM171A1 8 3 chr9:34048825:- chr10:15284105:- . NA TCGA-A2-A0T0-01A-22R-A084-07 ANK3-CCDC6 1 3 chr10:60134271:- chr10:59852702:- INFRAME NA TCGA-A2-A0T1-01A-21R-A084-07 SRCIN1-PCYT2 27 90 chr17:38574876:- chr17:81909602:- FRAMESHIFT NA TCGA-A2-A0T1-01A-21R-A084-07 ACOT7-NSMCE2 15 78 chr1:6393257:- chr8:125366768:+ INFRAME NA TCGA-A2-A0T1-01A-21R-A084-07 SAMD12-FDCSP 6 58 chr8:118580715:- chr4:70231195:+ INFRAME NA TCGA-A2-A0T1-01A-21R-A084-07 DENND1A-LRRC69 7 41 chr9:123757703:- chr8:91218890:+ FRAMESHIFT NA TCGA-A2-A0T1-01A-21R-A084-07 TSPAN10-PCYT2 11 0 chr17:81637268:+ chr17:81902894:- . NA TCGA-A2-A0T1-01A-21R-A084-07 ABCA6-LIG3 4 26 chr17:69106123:- chr17:34996064:+ INFRAME NA TCGA-A2-A0T1-01A-21R-A084-07 DENND1A-SLC26A7 7 12 chr9:123757703:- chr8:91218890:+ . NA TCGA-A2-A0T1-01A-21R-A084-07 POLR2D-TFCP2L1 5 16 chr2:127847063:- chr2:121219485:- . NA TCGA-A2-A0T1-01A-21R-A084-07 DAB2IP-HTN3 4 14 chr9:121678781:+ chr4:70028443:+ . NA TCGA-A2-A0T1-01A-21R-A084-07 COX18-TBCD 4 10 chr4:73061813:- chr17:82903405:+ FRAMESHIFT NA TCGA-A2-A0T1-01A-21R-A084-07 WDR70-PGAP3 2 18 chr5:37479987:+ chr17:39674679:- INFRAME NA TCGA-A2-A0T1-01A-21R-A084-07 TANC2-GOSR1 3 9 chr17:63238077:+ chr17:30519939:+ FRAMESHIFT NA TCGA-A2-A0T1-01A-21R-A084-07 NIPBL-ANKRD17 2 12 chr5:37010225:+ chr4:73177533:- INFRAME NA TCGA-A2-A0T1-01A-21R-A084-07 METRNL-PPP1R1B 2 10 chr17:83085323:+ chr17:39629170:+ FRAMESHIFT NA TCGA-A2-A0T1-01A-21R-A084-07 ENDOV-IKZF3 1 5 chr17:80429831:+ chr17:39766493:- INFRAME NA TCGA-A2-A0T3-01A-21R-A115-07 GRK3-SF3A1 4 32 chr22:25644665:+ chr22:30353072:- INFRAME NA TCGA-A2-A0T3-01A-21R-A115-07 RPGRIP1L-KLHL22 1 6 chr16:53686433:- chr22:20489212:- INFRAME NA TCGA-A2-A0T3-01A-21R-A115-07 RAB28-MGME1 1 5 chr4:13460699:- chr20:17969801:+ . NA TCGA-A2-A0T3-01A-21R-A115-07 TRIO-LRFN5 1 3 chr5:14482773:+ chr14:41898917:+ FRAMESHIFT NA TCGA-A2-A0T4-01A-31R-A084-07 ALG8-NARS2 26 119 chr11:78103980:- chr11:78493195:- INFRAME NA TCGA-A2-A0T4-01A-31R-A084-07 LRRC1-MLIP 3 33 chr6:53795415:+ chr6:54121447:+ INFRAME NA TCGA-A2-A0T4-01A-31R-A084-07 THAP12-FCHSD2 4 9 chr11:76360956:- chr11:73083740:- FRAMESHIFT NA TCGA-A2-A0T4-01A-31R-A084-07 GSTA4-NADSYN1 3 6 chr6:52982574:- chr11:71497483:+ INFRAME NA TCGA-A2-A0T4-01A-31R-A084-07 COX6C-ZFPM2 2 7 chr8:99887490:- chr8:104895407:+ . NA TCGA-A2-A0T4-01A-31R-A084-07 SCAF8-GINM1 2 3 chr6:154733930:+ chr6:149572285:+ INFRAME NA TCGA-A2-A0T4-01A-31R-A084-07 KDM2A-FAM83B 1 3 chr11:67181892:+ chr6:54870187:+ . NA TCGA-A2-A0T4-01A-31R-A084-07 LRP12-KCNB2 1 1 chr8:104588819:- chr8:72567642:+ . NA TCGA-A2-A0T7-01A-21R-A084-07 CTPS2-RBBP7 58 270 chrX:16698238:- chrX:16853844:- . NA TCGA-A2-A0T7-01A-21R-A084-07 FAAH2-SSPN 5 14 chrX:57292580:+ chr12:26287483:+ . NA TCGA-A2-A0T7-01A-21R-A084-07 ADCY9-SRL 4 11 chr16:4113750:- chr16:4195786:- INFRAME NA TCGA-A2-A0T7-01A-21R-A084-07 CUX1-MARCH10 1 22 chr7:101816093:+ chr17:62760006:- INFRAME NA TCGA-A2-A0T7-01A-21R-A084-07 UBL3-CRISPLD2 4 10 chr13:29772112:- chr16:84866897:+ INFRAME NA TCGA-A2-A0T7-01A-21R-A084-07 UAP1-LMX1A 2 2 chr1:162590511:+ chr1:165249640:- INFRAME NA TCGA-A2-A0YE-01A-11R-A109-07 PDGFA-NT5C3A 46 246 chr7:510809:- chr7:33024108:- INFRAME NA TCGA-A2-A0YE-01A-11R-A109-07 HS2ST1-PRDX1 18 75 chr1:86915160:+ chr1:45519054:- . NA TCGA-A2-A0YE-01A-11R-A109-07 SDF2-RPTOR 7 35 chr17:28661726:- chr17:80625691:+ FRAMESHIFT NA TCGA-A2-A0YE-01A-11R-A109-07 KLHL26-KXD1 4 13 chr19:18664443:+ chr19:18568402:+ INFRAME NA TCGA-A2-A0YE-01A-11R-A109-07 CREB5-USP42 2 13 chr7:28507737:+ chr7:6156754:+ FRAMESHIFT NA TCGA-A2-A0YE-01A-11R-A109-07 PRKCA-ST6GALNAC2 2 12 chr17:66496283:+ chr17:76578816:- INFRAME NA TCGA-A2-A0YE-01A-11R-A109-07 NBPF26-MACF1 3 7 chr1:120763709:+ chr1:39309570:+ INFRAME NA TCGA-A2-A0YE-01A-11R-A109-07 MTOR-CDC42 2 4 chr1:11199258:- chr1:22078429:+ . NA TCGA-A2-A0YF-01A-21R-A109-07 UVRAG-MYEOV 26 64 chr11:75861780:+ chr11:69366743:+ . NA TCGA-A2-A0YF-01A-21R-A109-07 STX5-BSCL2 7 38 chr11:62825036:- chr11:62694711:- FRAMESHIFT NA TCGA-A2-A0YF-01A-21R-A109-07 ARRB1-MYEOV 5 18 chr11:75281075:- chr11:69367039:+ . NA TCGA-A2-A0YF-01A-21R-A109-07 ANO1-EMSY 3 5 chr11:70078714:+ chr11:76549952:+ INFRAME NA TCGA-A2-A0YF-01A-21R-A109-07 THSD4-THAP10 1 1 chr15:71154932:+ chr15:70882908:- INFRAME NA TCGA-A2-A0YG-01A-21R-A109-07 RARA-PRR11 1016 3491 chr17:40318448:+ chr17:59169748:+ . NA TCGA-A2-A0YG-01A-21R-A109-07 DCAF7-RGS9 120 637 chr17:63550815:+ chr17:65119152:+ . NA TCGA-A2-A0YG-01A-21R-A109-07 DCAF6-MPZL1 32 83 chr1:167937008:+ chr1:167765583:+ INFRAME NA TCGA-A2-A0YG-01A-21R-A109-07 NOS1AP-MROH9 10 60 chr1:162333125:+ chr1:171014117:+ INFRAME NA TCGA-A2-A0YG-01A-21R-A109-07 UCK2-SNX27 10 21 chr1:165827932:+ chr1:151638888:+ INFRAME NA TCGA-A2-A0YG-01A-21R-A109-07 RTN4-DTNB 6 21 chr2:54982515:- chr2:25388361:- INFRAME NA TCGA-A2-A0YG-01A-21R-A109-07 APH1A-RGS4 6 12 chr1:150268698:- chr1:163069252:+ FRAMESHIFT NA TCGA-A2-A0YG-01A-21R-A109-07 ZNF91-RNF38 4 14 chr19:23373738:- chr9:36424679:- . NA TCGA-A2-A0YG-01A-21R-A109-07 PPP3R1-TTC27 2 10 chr2:68252125:- chr2:32782626:+ INFRAME NA TCGA-A2-A0YH-01A-11R-A109-07 PLCD4-IGLV3-4 10 0 chr2:218628141:+ chr22:22858185:+ . NA TCGA-A2-A0YH-01A-11R-A109-07 P4HA1-C10orf11 2 4 chr10:73096766:- chr10:76557209:+ . NA TCGA-A2-A0YI-01A-31R-A10J-07 PACS1-RHOD 4 10 chr11:66193573:+ chr11:67065896:+ INFRAME NA TCGA-A2-A0YJ-01A-11R-A109-07 ILF3-C3 15 37 chr19:10654487:+ chr19:6697794:- . NA TCGA-A2-A0YJ-01A-11R-A109-07 TFEB-LASP1 3 10 chr6:41735350:- chr17:38878086:+ . NA TCGA-A2-A0YJ-01A-11R-A109-07 CASC3-MED24 1 12 chr17:40141607:+ chr17:40053635:- FRAMESHIFT NA TCGA-A2-A0YJ-01A-11R-A109-07 MAP3K2-SUPT3H 1 12 chr2:127387452:- chr6:44829857:- . NA TCGA-A2-A0YJ-01A-11R-A109-07 BTBD9-ATAD1 1 10 chr6:38577600:- chr10:87814612:- . NA TCGA-A2-A0YJ-01A-11R-A109-07 MED20-PGC 1 6 chr6:41916785:- chr6:41744808:- FRAMESHIFT NA TCGA-A2-A0YK-01A-22R-A109-07 TESMIN-KMT5B 5 28 chr11:68747208:- chr11:68190152:- . NA TCGA-A2-A0YK-01A-22R-A109-07 KIAA0368-ZNF484 1 1 chr9:111423199:- chr9:92875059:- . NA TCGA-A2-A0YM-01A-11R-A109-07 SS18-SUPT3H 106 276 chr18:26087501:- chr6:44809501:- . NA TCGA-A2-A0YM-01A-11R-A109-07 PBX1-ILDR2 7 25 chr1:164563311:+ chr1:166958101:- INFRAME NA TCGA-A2-A0YM-01A-11R-A109-07 RGL3-ECSIT 5 24 chr19:11399855:- chr19:11506428:- FRAMESHIFT NA TCGA-A2-A0YM-01A-11R-A109-07 MEGF8-PRR19 5 21 chr19:42337206:+ chr19:42309579:+ . NA TCGA-A2-A0YM-01A-11R-A109-07 CHODL-MIR548XHG 1 16 chr21:17917400:+ chr21:18612293:- . NA TCGA-A2-A0YM-01A-11R-A109-07 PHLPP1-CBLN2 2 11 chr18:62972708:+ chr18:72620590:- . NA TCGA-A2-A0YM-01A-11R-A109-07 DCAF6-SLC19A2 4 1 chr1:167937008:+ chr1:169470186:- FRAMESHIFT NA TCGA-A2-A0YT-01A-11R-A109-07 TNRC18-RNF216 16 47 chr7:5370375:- chr7:5652510:- FRAMESHIFT NA TCGA-A2-A0YT-01A-11R-A109-07 LARGE1-SNW1 6 53 chr22:33564848:- chr14:77723277:- INFRAME NA TCGA-A2-A0YT-01A-11R-A109-07 NPC2-RAD51B 7 38 chr14:74493193:- chr14:68411424:+ INFRAME NA TCGA-A2-A0YT-01A-11R-A109-07 RAD51B-TMPRSS4 7 12 chr14:68411527:+ chr11:118111741:+ FRAMESHIFT NA TCGA-A2-A0YT-01A-11R-A109-07 CRYBG3-ARL6 1 11 chr3:97864647:+ chr3:97784955:+ INFRAME NA TCGA-A2-A0YT-01A-11R-A109-07 JUP-RFX5 3 1 chr17:41767529:- chr1:151342780:- FRAMESHIFT NA TCGA-A2-A0YT-01A-11R-A109-07 ERBB4-SLC25A10 1 1 chr2:212538449:- chr17:81714953:+ FRAMESHIFT Likely Oncogenic NA TCGA-A2-A0YT-01A-11R-A109-07 PDCD6IP-SRSF1 1 1 chr3:33826580:+ chr17:58005041:- FRAMESHIFT NA TCGA-A2-A0YT-01A-11R-A109-07 HIST1H2BH-HIST1H2AC 1000 1000 chr6:26252143:+ chr6:26124200:+ . NA TCGA-A2-A1FV-01A-11R-A13Q-07 TET2-LANCL1 7 34 chr4:105243778:+ chr2:210476412:- . Likely Oncogenic NA TCGA-A2-A1FV-01A-11R-A13Q-07 FNTB-PEBP4 6 17 chr14:64987097:+ chr8:22727220:- INFRAME NA TCGA-A2-A1FV-01A-11R-A13Q-07 WBP4-FANK1 2 14 chr13:41061675:+ chr10:125980161:+ FRAMESHIFT NA TCGA-A2-A1FV-01A-11R-A13Q-07 PEBP4-UNC5D 2 5 chr8:22724843:- chr8:35549292:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 PBX1-COPG2 152 1212 chr1:164563311:+ chr7:130508659:- INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 CPD-AATF 211 583 chr17:30420983:+ chr17:37019005:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 TUFT1-PRKCA 143 436 chr1:151540426:+ chr17:66786867:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 ZBED6-TMCC2 56 391 chr1:203831771:+ chr1:205268950:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 ZC3H11A-TMCC2 56 391 chr1:203831771:+ chr1:205268950:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 POGK-FMOD 52 158 chr1:166841088:+ chr1:203342494:- FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 RAB3GAP2-CNIH4 27 185 chr1:220210388:- chr1:224375795:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 CDC42SE1-TNKS 30 128 chr1:151059479:- chr8:9761516:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 VMP1-RNFT1 16 148 chr17:59773885:+ chr17:59954146:- INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 ATRN-RNF24 16 67 chr20:3576997:+ chr20:3935073:- FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 MKS1-SPAG9 8 84 chr17:58210659:- chr17:51031722:- FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 TNRC6C-PLCB4 9 57 chr17:78083166:+ chr20:9453347:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 ACBD6-CHIT1 9 51 chr1:180413366:- chr1:203240658:- . NA TCGA-A2-A1FW-01A-11R-A13Q-07 GON4L-PIPOX 7 55 chr1:155821474:- chr17:29044859:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 DYNLL2-SEPT4 11 38 chr17:58083683:+ chr17:58526313:- . NA TCGA-A2-A1FW-01A-11R-A13Q-07 PLCG1-BPIFB1 9 27 chr20:41137858:+ chr20:33286033:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 RABGAP1L-ACBD6 7 21 chr1:174637488:+ chr1:180397605:- INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 KDM5B-RABGAP1L 8 13 chr1:202773118:- chr1:174370979:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 C20orf194-TDRD10 7 16 chr20:3374048:- chr1:154542024:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 ACBD6-IVNS1ABP 3 29 chr1:180397516:- chr1:185305643:- INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 CPD-RABIF 3 28 chr17:30421891:+ chr1:202879588:- . NA TCGA-A2-A1FW-01A-11R-A13Q-07 NBPF12-USP32 4 23 chr1:146939012:+ chr17:60271481:- . NA TCGA-A2-A1FW-01A-11R-A13Q-07 VMP1-RNF24 5 18 chr17:59731522:+ chr20:3964024:- FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 BCAS3-CA4 5 15 chr17:61084564:+ chr17:60170551:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 PLEKHM1P1-UTP18 5 8 chr17:64785222:- chr17:51280005:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 TANC2-RNF2 5 8 chr17:63267873:+ chr1:185087552:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 ERBIN-ZBTB10 2 14 chr5:65994864:+ chr8:80499494:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 BCAS3-DISP1 4 2 chr17:60990235:+ chr1:222942807:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 MPZL1-PDE4DIP 3 4 chr1:167722242:+ chr1:148937747:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 PRKCA-CRYBA1 2 7 chr17:66306127:+ chr17:29249142:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 RPS6KB1-MAP3K3 2 6 chr17:59945518:+ chr17:63646034:+ INFRAME NA TCGA-A2-A1FW-01A-11R-A13Q-07 HECTD2-GLRX3 1 8 chr10:91410576:+ chr10:130180113:+ . NA TCGA-A2-A1FW-01A-11R-A13Q-07 GLRX3-C10orf11 1 6 chr10:130175089:+ chr10:76557209:+ FRAMESHIFT NA TCGA-A2-A1FW-01A-11R-A13Q-07 AKIRIN2-ANKRD55 1 2 chr6:87701450:- chr5:56183634:- INFRAME NA TCGA-A2-A1FX-01A-11R-A13Q-07 TMED5-HFM1 6 19 chr1:93180054:- chr1:91353152:- FRAMESHIFT NA TCGA-A2-A1FX-01A-11R-A13Q-07 PKP3-C11orf98 1 1 chr11:397662:+ chr11:62664973:- INFRAME NA TCGA-A2-A1G0-01A-11R-A13Q-07 OSBP2-EFCAB6 1 3 chr22:30893733:+ chr22:43765393:- INFRAME NA TCGA-A2-A1G1-01A-21R-A13Q-07 POLR2A-ALOX12 62 95 chr17:7484857:+ chr17:6999257:+ . NA TCGA-A2-A1G1-01A-21R-A13Q-07 FBXL20-MSL1 44 159 chr17:39297127:- chr17:40134279:+ INFRAME NA TCGA-A2-A1G1-01A-21R-A13Q-07 STARD3-NFIX 5 85 chr17:39653750:+ chr19:13025021:+ INFRAME NA TCGA-A2-A1G1-01A-21R-A13Q-07 FBXL20-SYNRG 11 55 chr17:39297127:- chr17:37554059:- FRAMESHIFT NA TCGA-A2-A1G1-01A-21R-A13Q-07 RPL23-TCAP 16 34 chr17:38849657:- chr17:39665895:+ . NA TCGA-A2-A1G1-01A-21R-A13Q-07 NFIX-HNF1B 6 21 chr19:13095729:+ chr17:37710663:- . NA TCGA-A2-A1G1-01A-21R-A13Q-07 NIFK-BTBD2 5 24 chr2:121736746:- chr19:1997463:- FRAMESHIFT NA TCGA-A2-A1G1-01A-21R-A13Q-07 CASC3-ZNF254 4 18 chr17:40141607:+ chr19:24126254:+ FRAMESHIFT NA TCGA-A2-A1G1-01A-21R-A13Q-07 PPP6R2-EMID1 2 23 chr22:50406875:+ chr22:29231020:+ INFRAME NA TCGA-A2-A1G1-01A-21R-A13Q-07 BTBD2-ISG20L2 3 11 chr19:1986896:- chr1:156727268:- INFRAME NA TCGA-A2-A1G1-01A-21R-A13Q-07 ERBB2-PSMB3 1 3 chr17:39723660:+ chr17:38764119:+ FRAMESHIFT NA TCGA-A2-A1G4-01A-11R-A13Q-07 MARK2-GLYATL2 146 491 chr11:63839560:+ chr11:58844524:- . NA TCGA-A2-A1G4-01A-11R-A13Q-07 PPFIA1-MARK2 33 82 chr11:70272436:+ chr11:63895159:+ INFRAME NA TCGA-A2-A1G4-01A-11R-A13Q-07 RNF121-VPS37C 25 58 chr11:71960891:+ chr11:61134207:- INFRAME NA TCGA-A2-A1G4-01A-11R-A13Q-07 SHANK3-BAG4 1 14 chr22:50684651:+ chr8:38192688:+ FRAMESHIFT NA TCGA-A2-A1G4-01A-11R-A13Q-07 NDUFAF6-LSM1 1 11 chr8:94895927:+ chr8:38172033:- . NA TCGA-A2-A259-01A-11R-A16F-07 INCENP-ANKFN1 1 6 chr11:62152551:+ chr17:56510473:+ . NA TCGA-A2-A25A-01A-12R-A16F-07 GSE1-HSD17B2 3 5 chr16:85634132:+ chr16:82068170:+ INFRAME NA TCGA-A2-A25A-01A-12R-A16F-07 H2AFY2-SRGN 1 6 chr10:70091954:+ chr10:69097084:+ FRAMESHIFT NA TCGA-A2-A25B-01A-11R-A169-07 SPAG5-BLMH 41 105 chr17:28598510:- chr17:30249168:- FRAMESHIFT NA TCGA-A2-A25B-01A-11R-A169-07 RCC2-PADI4 14 63 chr1:17429106:- chr1:17354533:+ FRAMESHIFT NA TCGA-A2-A25B-01A-11R-A169-07 FLOT2-PEX12 23 23 chr17:28888945:- chr17:35577591:- FRAMESHIFT NA TCGA-A2-A25B-01A-11R-A169-07 DDX42-BRIP1 11 47 chr17:63806654:+ chr17:61808757:- INFRAME Likely Oncogenic NA TCGA-A2-A25B-01A-11R-A169-07 MAST4-NLN 12 37 chr5:67153580:+ chr5:65822781:+ INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 ADNP-DPM1 11 16 chr20:50928651:- chr20:50945923:- . NA TCGA-A2-A25B-01A-11R-A169-07 RABEP1-ASPA 6 18 chr17:5282520:+ chr17:3494350:+ INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 PITPNC1-BPTF 5 21 chr17:67578257:+ chr17:67918714:+ FRAMESHIFT NA TCGA-A2-A25B-01A-11R-A169-07 USP36-OFCC1 3 15 chr17:78812860:- chr6:9705442:- . NA TCGA-A2-A25B-01A-11R-A169-07 SMG6-WDR20 2 11 chr17:2303633:- chr14:102194938:+ INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 SENP2-MAP3K13 3 3 chr3:185586514:+ chr3:185472975:+ INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 SLC38A11-RABGAP1L 2 5 chr2:164908640:- chr1:174957457:+ INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 STAG2-XIAP 1 6 chrX:123960866:+ chrX:123900493:+ . Likely Oncogenic NA TCGA-A2-A25B-01A-11R-A169-07 CYBRD1-SLC38A11 1 5 chr2:171522738:+ chr2:164915973:- FRAMESHIFT NA TCGA-A2-A25B-01A-11R-A169-07 NSRP1-ANKRD13B 1 5 chr17:30118173:+ chr17:29607742:+ INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 USP21-NECTIN4 1 4 chr1:161164250:+ chr1:161072885:- INFRAME NA TCGA-A2-A25B-01A-11R-A169-07 KANSL3-UFC1 1 3 chr2:96608508:- chr1:161153926:+ . NA TCGA-A2-A25C-01A-11R-A169-07 PEX1-NBEA 2 10 chr7:92499704:- chr13:35040933:+ INFRAME NA TCGA-A2-A25C-01A-11R-A169-07 NHSL1-SPATA13 1 4 chr6:138496219:- chr13:24222819:+ . NA TCGA-A2-A25D-01A-12R-A16F-07 AP2A1-DHDH 152 228 chr19:49767200:+ chr19:48939449:+ INFRAME NA TCGA-A2-A25D-01A-12R-A16F-07 HAUS6-PLIN2 47 101 chr9:19070219:- chr9:19108747:- . NA TCGA-A2-A25D-01A-12R-A16F-07 MTCH2-FNBP4 7 31 chr11:47638699:- chr11:47720086:- INFRAME NA TCGA-A2-A25D-01A-12R-A16F-07 EXOSC1-SORCS1 5 24 chr10:97437191:- chr10:106574181:- . NA TCGA-A2-A25D-01A-12R-A16F-07 KAT6A-ANK1 4 11 chr8:42048378:- chr8:41758137:- INFRAME NA TCGA-A2-A25D-01A-12R-A16F-07 KCNMA1-MSMB 4 4 chr10:77110173:- chr10:46040091:- INFRAME NA TCGA-A2-A25D-01A-12R-A16F-07 ADCY5-HACD2 2 9 chr3:123447412:- chr3:123502681:- INFRAME NA TCGA-A2-A25D-01A-12R-A16F-07 MCM9-FAM184A 2 7 chr6:118934891:- chr6:118960184:- . NA TCGA-A2-A25D-01A-12R-A16F-07 FNIP1-MEIKIN 2 5 chr5:131796830:- chr5:131807258:- FRAMESHIFT NA TCGA-A2-A25E-01A-11R-A169-07 TYW1-TPST1 5 4 chr7:67055887:+ chr7:66286511:+ FRAMESHIFT NA TCGA-A2-A25E-01A-11R-A169-07 TRAPPC9-SLC45A4 1 4 chr8:140397620:- chr8:141219829:- FRAMESHIFT NA TCGA-A2-A25F-01A-11R-A169-07 GNE-ERP27 32 289 chr9:36276894:- chr12:14921048:- INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 VPS37B-VPS33A 19 31 chr12:122895952:- chr12:122242508:- INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 LANCL2-TFDP2 15 30 chr7:55401320:+ chr3:141963963:- INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 TFDP2-LANCL2 7 28 chr3:142093061:- chr7:55398423:+ INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 CELSR1-MAFF 2 6 chr22:46372883:- chr22:38213823:+ . NA TCGA-A2-A25F-01A-11R-A169-07 DIXDC1-C11orf1 2 5 chr11:111929910:+ chr11:111883771:+ INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 FBXO32-ANXA13 2 5 chr8:123506392:- chr8:123712753:- INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 PUM1-SDC3 1 5 chr1:31059204:- chr1:30878740:- INFRAME NA TCGA-A2-A25F-01A-11R-A169-07 TNPO2-RTBDN 1 3 chr19:12722477:- chr19:12829997:- . NA TCGA-A2-A3KD-01A-12R-A213-07 ASPH-RSF1 12 15 chr8:61517528:- chr11:77702495:- FRAMESHIFT NA TCGA-A2-A3XT-01A-11R-A22U-07 ATP11A-MCF2L 17 19 chr13:112690455:+ chr13:113074444:+ INFRAME NA TCGA-A2-A3XT-01A-11R-A22U-07 CASC4-CTDSPL2 1 9 chr15:44289356:+ chr15:44458991:+ . NA TCGA-A2-A3XT-01A-11R-A22U-07 CSPP1-VRK1 2 1 chr8:67137603:+ chr14:96833467:+ . NA TCGA-A2-A3XT-01A-11R-A22U-07 MRPL13-RNF130 1 2 chr8:120413991:- chr5:180040647:- FRAMESHIFT NA TCGA-A2-A3XV-01A-21R-A239-07 OS9-MUCL1 2 2 chr12:57719182:+ chr12:54856770:+ INFRAME NA TCGA-A2-A3XV-01A-21R-A239-07 ARHGEF12-C14orf2 1 1 chr11:120475507:+ chr14:103915189:- FRAMESHIFT NA TCGA-A2-A3XW-01A-11R-A239-07 IL4I1-KCNQ2 88 174 chr19:49927694:- chr20:63445364:- . NA TCGA-A2-A3XW-01A-11R-A239-07 NUP62-KCNQ2 88 174 chr19:49927694:- chr20:63445364:- . NA TCGA-A2-A3XW-01A-11R-A239-07 OSBPL5-RHOG 14 35 chr11:3126473:- chr11:3828206:- . NA TCGA-A2-A3XW-01A-11R-A239-07 STAU1-GPHB5 4 5 chr20:49174195:- chr14:63313116:- . NA TCGA-A2-A3XW-01A-11R-A239-07 SIX1-CYB5R2 3 7 chr14:60648630:- chr11:7668561:- FRAMESHIFT NA TCGA-A2-A3XW-01A-11R-A239-07 OSBPL2-ADCK1 3 6 chr20:62285908:+ chr14:77819097:+ . NA TCGA-A2-A3XW-01A-11R-A239-07 LRR1-MTHFD1 1 8 chr14:49608121:+ chr14:64415358:+ FRAMESHIFT NA TCGA-A2-A3XX-01A-21R-A239-07 RPL7L1-KLC4 23 130 chr6:42886470:+ chr6:43043058:+ . NA TCGA-A2-A3XX-01A-21R-A239-07 TRPS1-ZNRF2 3 38 chr8:115668545:- chr7:30355728:+ . NA TCGA-A2-A3XX-01A-21R-A239-07 URI1-IFNL1 4 30 chr19:29971227:+ chr19:39296805:+ FRAMESHIFT NA TCGA-A2-A3XX-01A-21R-A239-07 E2F3-AKIRIN2 1 19 chr6:20403832:+ chr6:87681763:- FRAMESHIFT NA TCGA-A2-A3XX-01A-21R-A239-07 NXN-MIR3945HG 3 6 chr17:979319:- chr4:184855573:- . NA TCGA-A2-A3XX-01A-21R-A239-07 CDC5L-E2F3-IT1 1 13 chr6:44426724:+ chr6:20439957:+ . NA TCGA-A2-A3XX-01A-21R-A239-07 ZNF610-UQCRFS1 1 1 chr19:52354379:+ chr19:29208158:- INFRAME NA TCGA-A2-A3XZ-01A-42R-A239-07 SMARCE1-HELZ 95 94 chr17:40642455:- chr17:67087081:- INFRAME NA TCGA-A2-A3XZ-01A-42R-A239-07 BCAS3-KRTAP4-16 15 45 chr17:60747279:+ chr17:41102201:- FRAMESHIFT NA TCGA-A2-A3XZ-01A-42R-A239-07 SEC24D-CFI 8 15 chr4:118797683:- chr4:109766824:- INFRAME NA TCGA-A2-A3XZ-01A-42R-A239-07 PITPNC1-ANXA10 2 19 chr17:67378202:+ chr4:168162528:+ INFRAME NA TCGA-A2-A3XZ-01A-42R-A239-07 ABCA5-BCAS3 2 6 chr17:69327052:- chr17:60709219:+ . NA TCGA-A2-A3XZ-01A-42R-A239-07 PITPNC1-B4GALNT2 1 2 chr17:67675542:+ chr17:49141247:+ FRAMESHIFT NA TCGA-A2-A3Y0-01A-11R-A239-07 ZNF732-DAB1 6 72 chr4:295438:- chr1:57145429:- INFRAME NA TCGA-A2-A3Y0-01A-11R-A239-07 SPTBN2-FGF19 12 47 chr11:66686398:- chr11:69699576:- INFRAME NA TCGA-A2-A3Y0-01A-11R-A239-07 TCF12-TMEM255B 5 5 chr15:57263274:+ chr13:113766115:+ FRAMESHIFT NA TCGA-A2-A4S1-01A-21R-A266-07 CDH11-PRC1 50 310 chr16:64971579:- chr15:90969623:- FRAMESHIFT NA TCGA-A2-A4S1-01A-21R-A266-07 PLA2G6-EEF1D 12 10 chr22:38143105:- chr8:143580206:- INFRAME NA TCGA-A2-A4S1-01A-21R-A266-07 RHPN2-BLVRB 6 13 chr19:33021571:- chr19:40451492:- FRAMESHIFT NA TCGA-A2-A4S3-01A-21R-A266-07 ANKRD12-MTHFD2L 7 56 chr18:9221999:+ chr4:74225302:+ INFRAME NA TCGA-A2-A4S3-01A-21R-A266-07 ELMOD3-TCF7L1 2 9 chr2:85362260:+ chr2:85309029:+ FRAMESHIFT NA TCGA-A2-A4S3-01A-21R-A266-07 PCMTD1-ST18 1 8 chr8:51898930:- chr8:52246664:- . NA TCGA-A7-A0CE-01A-11R-A00Z-07 UBL3-MTIF3 20 32 chr13:29849512:- chr13:27445156:- . NA TCGA-A7-A0CE-01A-11R-A00Z-07 RNF121-CYSLTR2 13 38 chr11:71960891:+ chr13:48706817:+ . NA TCGA-A7-A0CG-01A-12R-A056-07 FBXO22-SNX33 3 26 chr15:75917394:+ chr15:75656962:+ INFRAME NA TCGA-A7-A0CG-01A-12R-A056-07 PRRC2C-FASLG 1 16 chr1:171485735:+ chr1:172665622:+ . NA TCGA-A7-A0CG-01A-12R-A056-07 LRP6-GPR19 2 6 chr12:12244262:- chr12:12662470:- . NA TCGA-A7-A0CG-01A-12R-A056-07 CENPO-UBXN2A 1 9 chr2:24799844:+ chr2:23999672:+ FRAMESHIFT NA TCGA-A7-A0CG-01A-12R-A056-07 NFX1-DNAJA1 1 9 chr9:33319127:+ chr9:33038685:+ FRAMESHIFT NA TCGA-A7-A0CH-01A-21R-A00Z-07 SH3BGR-IGSF5 1 3 chr21:39499915:+ chr21:39792008:+ FRAMESHIFT NA TCGA-A7-A0CJ-01A-21R-A00Z-07 RPAIN-FHIT 6 78 chr17:5422829:+ chr3:59922414:- FRAMESHIFT NA TCGA-A7-A0CJ-01A-21R-A00Z-07 CDH24-HOMEZ 9 15 chr14:23054261:- chr14:23272828:- . NA TCGA-A7-A0CJ-01A-21R-A00Z-07 TET1-ASCC1 8 8 chr10:68601034:+ chr10:72161674:- INFRAME Likely Oncogenic NA TCGA-A7-A0CJ-01A-21R-A00Z-07 NINL-TGM2 4 2 chr20:25510674:- chr20:38130369:- FRAMESHIFT NA TCGA-A7-A0CJ-01A-21R-A00Z-07 CAPRIN2-ST8SIA1 1 13 chr12:30751071:- chr12:22070625:- . NA TCGA-A7-A0CJ-01A-21R-A00Z-07 ZNF789-CYP3A43 1 2 chr7:99473056:+ chr7:99836453:+ . NA TCGA-A7-A0D9-01A-31R-A056-07 KAT6A-ADAM5 258 1070 chr8:42048378:- chr8:39401333:+ . NA TCGA-A7-A0D9-01A-31R-A056-07 NSD3-RAB11FIP1 51 341 chr8:38295795:- chr8:37877550:- . NA TCGA-A7-A0D9-01A-31R-A056-07 RAB11FIP1-GFI1B 3 7 chr8:37861882:- chr9:132953378:+ . NA TCGA-A7-A0D9-01A-31R-A056-07 PROSC-DDHD2 1 4 chr8:37766355:+ chr8:38246233:+ INFRAME NA TCGA-A7-A0D9-01A-31R-A056-07 LRRC28-EIF4EBP1 1 2 chr15:99361511:+ chr8:38057081:+ INFRAME NA TCGA-A7-A0DA-01A-31R-A115-07 ADAM10-FIZ1 27 80 chr15:58665097:- chr19:55597901:- . NA TCGA-A7-A0DA-01A-31R-A115-07 USP33-TARS 26 47 chr1:77759643:- chr5:33445324:+ . NA TCGA-A7-A0DA-01A-31R-A115-07 AGAP1-RINT1 23 35 chr2:235883449:+ chr7:105563733:+ INFRAME NA TCGA-A7-A0DA-01A-31R-A115-07 XRCC6-GPX5 3 40 chr22:41622086:+ chr6:28529451:+ INFRAME NA TCGA-A7-A0DA-01A-31R-A115-07 SNAP47-PRSS38 8 5 chr1:227735499:+ chr1:227845470:+ INFRAME NA TCGA-A7-A0DA-01A-31R-A115-07 TMEM14B-BAG6 1 17 chr6:10755232:+ chr6:31651776:- . NA TCGA-A7-A0DA-01A-31R-A115-07 UBE3C-DNAJB6 2 2 chr7:157231327:+ chr7:157358547:+ . NA TCGA-A7-A0DA-01A-31R-A115-07 PPP1R9A-SUCO 2 1 chr7:95268707:+ chr1:172608747:+ FRAMESHIFT NA TCGA-A7-A0DA-01A-31R-A115-07 UTRN-AXIN1 1 3 chr6:144700243:+ chr16:314683:- FRAMESHIFT Likely Oncogenic NA TCGA-A7-A0DA-01A-31R-A115-07 HIST1H2AC-HIST1H4E 1000 1000 chr6:26124749:+ chr6:26204612:+ . NA TCGA-A7-A13D-01A-13R-A12P-07 UNC13D-SRP68 23 277 chr17:75832966:- chr17:76039342:- . NA TCGA-A7-A13D-01A-13R-A12P-07 MTF2-RPL5 14 61 chr1:93115618:+ chr1:92840551:+ FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 PARN-RRN3 18 28 chr16:14617590:- chr16:15084705:- INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 ARIH2-DHX30 13 45 chr3:48973816:+ chr3:47845700:+ INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 DPP3-PACS1 10 25 chr11:66497477:+ chr11:66230548:+ INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 KDM6B-TMEM95 3 52 chr17:7852108:+ chr17:7356185:+ . NA TCGA-A7-A13D-01A-13R-A12P-07 PBX1-DISC1 4 24 chr1:164563311:+ chr1:231958828:+ INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 TCF3-AP3D1 5 19 chr19:1621838:- chr19:2111828:- FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 ARID1A-DHDDS 4 19 chr1:26732792:+ chr1:26438168:+ INFRAME Likely Oncogenic NA TCGA-A7-A13D-01A-13R-A12P-07 TAF4-GATA5 5 11 chr20:62064451:- chr20:62465921:- FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 STK24-ATF7 6 3 chr13:98576745:- chr12:53601021:- . NA TCGA-A7-A13D-01A-13R-A12P-07 USP36-CEP295NL 3 15 chr17:78838587:- chr17:78873919:- . NA TCGA-A7-A13D-01A-13R-A12P-07 ABCB9-EIF2B1 3 14 chr12:122944391:- chr12:123622761:- INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 FAM219A-PAX5 4 5 chr9:34458204:- chr9:36923484:- INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 ESPNP-NECAP2 2 12 chr1:16696779:- chr1:16455818:+ . NA TCGA-A7-A13D-01A-13R-A12P-07 NEBL-FBXO11 3 6 chr10:20880794:- chr2:47839769:- FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 PLEKHO2-ZNF609 3 4 chr15:64848742:+ chr15:64622827:+ INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 SPAG5-FAM222B 3 4 chr17:28591698:- chr17:28766707:- . NA TCGA-A7-A13D-01A-13R-A12P-07 MACROD1-TRPT1 2 7 chr11:64151239:- chr11:64224341:- INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 NEBL-SKIDA1 1 11 chr10:21172383:- chr10:21523871:- . NA TCGA-A7-A13D-01A-13R-A12P-07 RAB5C-FAM134C 2 6 chr17:42154893:- chr17:42585262:- . NA TCGA-A7-A13D-01A-13R-A12P-07 SIRT7-CCDC57 1 10 chr17:81914294:- chr17:82101866:- FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 METAP2-VEZT 2 3 chr12:95474330:+ chr12:95270051:+ FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 MND1-ARFIP1 1 7 chr4:153358622:+ chr4:152863606:+ INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 GANAB-ZNF76 2 2 chr11:62632565:- chr6:35281056:+ . NA TCGA-A7-A13D-01A-13R-A12P-07 NIPBL-CLSPN 2 1 chr5:36877178:+ chr1:35765326:- . NA TCGA-A7-A13D-01A-13R-A12P-07 SRPK2-PUS7 2 1 chr7:105388648:- chr7:105508544:- . NA TCGA-A7-A13D-01A-13R-A12P-07 ASCC1-MICU1 1 3 chr10:72196811:- chr10:72375872:- INFRAME NA TCGA-A7-A13D-01A-13R-A12P-07 COMMD7-SUN5 1 2 chr20:32704023:- chr20:32995727:- FRAMESHIFT NA TCGA-A7-A13D-01A-13R-A12P-07 MELK-RGP1 1 2 chr9:36597290:+ chr9:35749737:+ . NA TCGA-A7-A13E-01A-11R-A12P-07 SLC39A3-PLPP2 25 138 chr19:2737048:- chr19:288171:- FRAMESHIFT NA TCGA-A7-A13E-01A-11R-A12P-07 EXTL3-SARAF 34 72 chr8:28622810:+ chr8:30066918:- . NA TCGA-A7-A13E-01A-11R-A12P-07 KDM4B-C19orf44 11 41 chr19:5016339:+ chr19:16500792:+ . NA TCGA-A7-A13E-01A-11R-A12P-07 MEIS3-CCDC94 1 2 chr19:47406460:- chr19:4251027:+ . NA TCGA-A7-A26F-01A-21R-A169-07 RNU2-2P-RNU2-6P 18 0 chr11:62841689:- chr13:46374471:- . NA TCGA-A7-A26F-01A-21R-A169-07 WDR74-RNU2-6P 18 0 chr11:62841689:- chr13:46374471:- . NA TCGA-A7-A26F-01A-21R-A169-07 CYFIP1-SNHG14 1 25 chr15:22939192:- chr15:25418788:+ . NA TCGA-A7-A26F-01A-21R-A169-07 EXOC5-C14orf105 4 1 chr14:57217982:- chr14:57493742:- . NA TCGA-A7-A26F-01A-21R-A169-07 CYFIP1-FAM189A1 1 4 chr15:22872825:- chr15:29381831:- INFRAME NA TCGA-A7-A26F-01A-21R-A169-07 KANSL1L-ACADL 1 3 chr2:210104104:- chr2:210220802:- FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 DCAF6-MPZL1 53 142 chr1:168004793:+ chr1:167765583:+ INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 TBCD-SLC9A3R1 34 152 chr17:82889697:+ chr17:74762012:+ INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 CCM2-PPIA 28 43 chr7:45038426:+ chr7:44799247:+ INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 RNF13-TM4SF4 7 42 chr3:149813353:+ chr3:149498722:+ . NA TCGA-A7-A26G-01A-21R-A169-07 ASH1L-ARHGEF2 7 33 chr1:155438327:- chr1:155983200:- INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 ABI2-CYP20A1 4 38 chr2:203328631:+ chr2:203289765:+ FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 SMAD3-DIS3L 8 17 chr15:67066360:+ chr15:66311724:+ FRAMESHIFT Likely Oncogenic NA TCGA-A7-A26G-01A-21R-A169-07 LIFR-C9 7 12 chr5:38493606:- chr5:39316029:- FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 MTF2-BRDT 6 8 chr1:93079531:+ chr1:92004414:+ FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 ILKAP-PER2 5 7 chr2:238182065:- chr2:238249212:- INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 DGCR2-CLTCL1 3 14 chr22:19089368:- chr22:19275830:- FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 SRBD1-CCDC88A 4 8 chr2:45476993:- chr2:55418916:- INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 PBRM1-TKT 4 7 chr3:52658199:- chr3:53242242:- INFRAME Likely Oncogenic NA TCGA-A7-A26G-01A-21R-A169-07 SH3KBP1-MAP7D2 2 14 chrX:19836125:- chrX:20008398:- . NA TCGA-A7-A26G-01A-21R-A169-07 TP53BP1-DMXL2 3 10 chr15:43432194:- chr15:51517167:- INFRAME Likely Oncogenic NA TCGA-A7-A26G-01A-21R-A169-07 ICMT-ACOT7 2 9 chr1:6234886:- chr1:6318578:- FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 MCU-CDH23 3 5 chr10:72692301:+ chr10:71675112:+ INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 ANK3-RHOBTB1 2 4 chr10:60733263:- chr10:60911552:- . NA TCGA-A7-A26G-01A-21R-A169-07 ZNF653-ELOF1 2 4 chr19:11495950:- chr19:11554365:- FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 MAN2B1-RTBDN 1 7 chr19:12661260:- chr19:12828767:- FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 RNF121-ANO1 2 2 chr11:71960891:+ chr11:70087752:+ INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 DHX34-PPP5C 2 1 chr19:47358120:+ chr19:46353748:+ FRAMESHIFT NA TCGA-A7-A26G-01A-21R-A169-07 TRIM35-CCDC25 1 3 chr8:27310801:- chr8:27752587:- INFRAME NA TCGA-A7-A26G-01A-21R-A169-07 RUFY3-ENAM 1000 1000 chr4:70705294:+ chr4:70662129:+ . NA TCGA-A7-A26H-01A-11R-A169-07 CELSR2-KCNC4 2 3 chr1:109273670:+ chr1:110222964:+ FRAMESHIFT NA TCGA-A7-A26I-01A-11R-A169-07 RNU1-88P-RNU1-16P 3 424 chr6:36639575:- chr13:113478980:- . NA TCGA-A7-A26I-01A-11R-A169-07 RNU1-77P-U1 49 0 chr15:82174275:- chr1:146376824:+ . NA TCGA-A7-A26I-01A-11R-A169-07 CLPTM1-CYP2A7 22 43 chr19:44985303:+ chr19:40880628:- INFRAME NA TCGA-A7-A26I-01A-11R-A169-07 EPRS-DNAH14 19 34 chr1:219987142:- chr1:225318583:+ FRAMESHIFT NA TCGA-A7-A26I-01A-11R-A169-07 UBE2O-PRPSAP1 2 2 chr17:76452725:- chr17:76313891:- FRAMESHIFT NA TCGA-A7-A26J-01A-11R-A169-07 SCGB1D2-ALDH3B1 15 67 chr11:62242362:+ chr11:68018527:+ FRAMESHIFT NA TCGA-A7-A26J-01A-11R-A169-07 THRAP3-EPHB2 10 46 chr1:36259484:+ chr1:22781421:+ . NA TCGA-A7-A26J-01A-11R-A169-07 SRSF4-SCRN3 4 5 chr1:29181646:- chr2:174399922:+ FRAMESHIFT NA TCGA-A7-A26J-01A-11R-A169-07 SCMH1-AGO3 2 9 chr1:41160875:- chr1:36027114:+ FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 GSE1-METTL23 61 592 chr16:85613398:+ chr17:76732978:+ FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 SEPT9-JMJD6 58 127 chr17:77281554:+ chr17:76725855:- FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 ZNF136-RNASEH2A 34 205 chr19:12163206:+ chr19:12804104:+ . NA TCGA-A7-A2KD-01A-31R-A21T-07 ERCC6-PREX1 10 34 chr10:49528417:- chr20:48708421:- FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 B4GALT1-FAM201A 3 61 chr9:33135189:- chr9:38621832:+ . NA TCGA-A7-A2KD-01A-31R-A21T-07 STX8-HSD17B4 6 31 chr17:9491829:- chr5:119456315:+ INFRAME NA TCGA-A7-A2KD-01A-31R-A21T-07 HSPA14-MRPS35 5 21 chr10:14840157:+ chr12:27735447:+ FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 NSF-HOXB-AS3 4 19 chr17:46674613:+ chr17:48600447:+ . NA TCGA-A7-A2KD-01A-31R-A21T-07 KIAA0100-TEX14 4 16 chr17:28638252:- chr17:58615345:- FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 IFI44L-SLC44A3 3 19 chr1:78620571:+ chr1:94857335:+ . NA TCGA-A7-A2KD-01A-31R-A21T-07 ADNP2-L3MBTL4 5 6 chr18:80109472:+ chr18:6215835:- . NA TCGA-A7-A2KD-01A-31R-A21T-07 RECQL5-SEC14L1 1 15 chr17:75651186:- chr17:77190803:+ FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 TEX14-TMEM98 2 6 chr17:58615232:- chr17:32936332:+ FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 PBLD-DNAJC12 1 9 chr10:68306761:- chr10:67823392:- INFRAME NA TCGA-A7-A2KD-01A-31R-A21T-07 AGFG1-FBXL14 1 7 chr2:227536993:+ chr12:1587536:- . NA TCGA-A7-A2KD-01A-31R-A21T-07 TMEM98-GRM5 1 5 chr17:32936447:+ chr11:88567992:- FRAMESHIFT NA TCGA-A7-A2KD-01A-31R-A21T-07 RASSF8-RAD52 1 4 chr12:25995130:+ chr12:927263:- . NA TCGA-A7-A2KD-01A-31R-A21T-07 CHD7-ASPH 1 1 chr8:60781430:+ chr8:61503509:- INFRAME NA TCGA-A7-A2KD-01A-31R-A21T-07 ANKRD18A-B4GALT1 1000 1000 chr9:38571358:- chr9:33167173:- . NA TCGA-A7-A3RF-01A-11R-A22K-07 ZDHHC16-PFKL 7 128 chr10:97446353:+ chr21:44312105:+ . NA TCGA-A7-A3RF-01A-11R-A22K-07 EXOSC1-CCDC144A 3 24 chr10:97445732:- chr17:16771977:+ INFRAME NA TCGA-A7-A425-01A-11R-A24H-07 C16orf87-ATXN2 1 8 chr16:46831084:- chr12:111453845:- INFRAME NA TCGA-A7-A4SD-01A-11R-A266-07 ADAMTS16-ETV6 3 73 chr5:5209246:+ chr12:11752450:+ INFRAME Likely Oncogenic NA TCGA-A7-A4SD-01A-11R-A266-07 ITPR2-ANO2 10 31 chr12:26427913:- chr12:5832603:- INFRAME NA TCGA-A7-A4SD-01A-11R-A266-07 CD9-ADAMTS12 3 31 chr12:6225534:+ chr5:33684055:- INFRAME NA TCGA-A7-A4SD-01A-11R-A266-07 HFE-SMIM25 1 39 chr6:26087516:+ chr20:50275646:+ . NA TCGA-A7-A4SD-01A-11R-A266-07 CYP51A1-BAIAP2L1 2 22 chr7:92123120:- chr7:98362432:- INFRAME NA TCGA-A7-A4SD-01A-11R-A266-07 LRRD1-BAIAP2L1 2 22 chr7:92123120:- chr7:98362432:- . NA TCGA-A7-A4SD-01A-11R-A266-07 SLC4A8-ZFP36L1 3 15 chr12:51462456:+ chr14:68789668:- FRAMESHIFT NA TCGA-A7-A4SD-01A-11R-A266-07 ARNTL2-DDX11L16 2 12 chr12:27370230:+ chrX:156027444:- . NA TCGA-A7-A4SD-01A-11R-A266-07 TTLL4-CNOT9 3 7 chr2:218711037:+ chr2:218580561:+ . NA TCGA-A7-A4SD-01A-11R-A266-07 GUSBP1-STK38L 1 13 chr5:21341976:+ chr12:27297710:+ . NA TCGA-A7-A4SD-01A-11R-A266-07 DNMT3A-ADCY3 3 4 chr2:25300139:- chr2:24842384:- INFRAME Likely Oncogenic NA TCGA-A7-A4SD-01A-11R-A266-07 RPP40-LYRM4 1 11 chr6:5003880:- chr6:5109491:- INFRAME NA TCGA-A7-A4SD-01A-11R-A266-07 ARNTL2-ITPR2 1 8 chr12:27390239:+ chr12:26443650:- FRAMESHIFT NA TCGA-A7-A4SD-01A-11R-A266-07 SLC4A8-BRF1 1000 1000 chr12:51462456:+ chr14:68789668:- . NA TCGA-A7-A4SE-01A-11R-A266-07 PKMYT1-CLDN6 11 76 chr16:2979648:- chr16:3018484:- . NA TCGA-A7-A4SE-01A-11R-A266-07 ARMC1-PEX19 12 52 chr8:65613244:- chr1:160279845:- INFRAME NA TCGA-A7-A4SE-01A-11R-A266-07 TRAPPC8-SS18 4 30 chr18:31907460:- chr18:26057742:- INFRAME NA TCGA-A7-A4SE-01A-11R-A266-07 GAREM1-GTF2H1 1 3 chr18:32287031:- chr11:18358525:+ INFRAME NA TCGA-A7-A56D-01A-11R-A27Q-07 PNPLA6-ECSIT 8 45 chr19:7534239:+ chr19:11508048:- . NA TCGA-A7-A56D-01A-11R-A27Q-07 NDFIP1-NDUFAF2 5 39 chr5:142144676:+ chr5:61152704:+ . NA TCGA-A7-A56D-01A-11R-A27Q-07 CCM2-PDHA1 4 15 chr7:45000363:+ chrX:19357652:+ INFRAME NA TCGA-A7-A56D-01A-11R-A27Q-07 GDPD1-SMG8 5 8 chr17:59220751:+ chr17:59214805:+ INFRAME NA TCGA-A7-A5ZV-01A-11R-A28M-07 TMEM45A-CMSS1 17 209 chr3:100519608:+ chr3:100160430:+ INFRAME NA TCGA-A7-A5ZV-01A-11R-A28M-07 MYSM1-ALG14 20 130 chr1:58699985:- chr1:94983306:- FRAMESHIFT NA TCGA-A7-A5ZV-01A-11R-A28M-07 ZNF487-FXYD4 6 41 chr10:43436935:+ chr10:43372727:+ . NA TCGA-A7-A5ZV-01A-11R-A28M-07 TUBB6-ROBO1 7 22 chr18:12311053:+ chr3:78636108:- INFRAME NA TCGA-A7-A5ZV-01A-11R-A28M-07 PHIP-PATJ 5 12 chr6:78997414:- chr1:61805448:+ FRAMESHIFT NA TCGA-A7-A5ZV-01A-11R-A28M-07 ERI3-CMPK1 1 13 chr1:44354892:- chr1:47368469:+ INFRAME NA TCGA-A7-A5ZV-01A-11R-A28M-07 TSPAN31-OS9 1 12 chr12:57746256:+ chr12:57715760:+ INFRAME NA TCGA-A7-A5ZV-01A-11R-A28M-07 MAST2-NASP 1 11 chr1:45882395:+ chr1:45591223:+ INFRAME NA TCGA-A7-A5ZV-01A-11R-A28M-07 GPBP1L1-UTP14A 2 2 chr1:45685576:- chrX:129907367:+ . NA TCGA-A7-A5ZV-01A-11R-A28M-07 DAGLA-POLD3 1 4 chr11:61680504:+ chr11:74629217:+ . NA TCGA-A7-A5ZV-01A-11R-A28M-07 TRABD2B-PKN2 1 2 chr1:47994034:- chr1:88740988:+ INFRAME NA TCGA-A7-A5ZX-01A-12R-A29R-07 CTNNA3-BORCS5 1 20 chr10:66621692:- chr12:12465546:+ INFRAME NA TCGA-A7-A6VV-01A-22R-A33J-07 TM9SF3-SLIT1 25 32 chr10:96586734:- chr10:97049118:- FRAMESHIFT NA TCGA-A7-A6VV-01A-22R-A33J-07 NIPBL-SLC30A9 12 72 chr5:36877178:+ chr4:42062986:+ . NA TCGA-A7-A6VV-01A-22R-A33J-07 CIC-RPS19 8 38 chr19:42268594:+ chr19:41869031:+ . Likely Oncogenic NA TCGA-A7-A6VV-01A-22R-A33J-07 ABTB2-LMO2 4 8 chr11:34356701:- chr11:33881887:- . NA TCGA-A7-A6VV-01A-22R-A33J-07 ALG6-UBE2U 3 12 chr1:63371059:+ chr1:64241652:+ INFRAME NA TCGA-A7-A6VV-01A-22R-A33J-07 CSRP1-RASGEF1B 3 11 chr1:201507070:- chr4:81602922:- . NA TCGA-A7-A6VV-01A-22R-A33J-07 SYNE2-RTN1 4 4 chr14:63967846:+ chr14:59746481:- FRAMESHIFT NA TCGA-A7-A6VV-01A-22R-A33J-07 ARPC1A-ZNF789 1 15 chr7:99344515:+ chr7:99500723:+ . NA TCGA-A7-A6VV-01A-22R-A33J-07 RBM4-ACTN3 3 5 chr11:66638752:+ chr11:66557133:+ . NA TCGA-A7-A6VV-01A-22R-A33J-07 PHRF1-TSPAN4 2 8 chr11:576592:+ chr11:850288:+ . NA TCGA-A7-A6VV-01A-22R-A33J-07 PRR5L-TRIM44 1 9 chr11:36403378:+ chr11:35725924:+ FRAMESHIFT NA TCGA-A7-A6VV-01A-22R-A33J-07 TMEM141-TRAF2 1 4 chr9:136792358:+ chr9:136898713:+ . NA TCGA-A7-A6VV-01A-22R-A33J-07 ARHGAP31-TIMMDC1 1 3 chr3:119383226:+ chr3:119513641:+ INFRAME NA TCGA-A7-A6VV-01A-22R-A33J-07 MOK-HSP90AA1 1 3 chr14:102263546:- chr14:102102085:- FRAMESHIFT NA TCGA-A7-A6VW-01A-21R-A33J-07 SYNJ2-GTF2H5 49 173 chr6:158017290:+ chr6:158170470:+ . NA TCGA-A7-A6VW-01A-21R-A33J-07 FAM160A2-DTD1 1 7 chr11:6218971:- chr20:18744100:+ FRAMESHIFT NA TCGA-A7-A6VW-01A-21R-A33J-07 PPP1R12C-KISS1 1 3 chr19:55098784:- chr1:204190797:- FRAMESHIFT NA TCGA-A7-A6VX-01A-12R-A33J-07 SPIRE1-CUBN 3 6 chr18:12449245:- chr10:16836382:- . NA TCGA-A7-A6VX-01A-12R-A33J-07 KIAA0907-PHC1 1 7 chr1:155933633:- chr12:8917630:+ . NA TCGA-A7-A6VY-01A-12R-A33J-07 UBXN4-R3HDM1 8 48 chr2:135776351:+ chr2:135680173:+ INFRAME NA TCGA-A7-A6VY-01A-12R-A33J-07 USP32-ARHGAP39 7 13 chr17:60345481:- chr8:144605695:- . NA TCGA-A7-A6VY-01A-12R-A33J-07 NECAB3-ARHGAP40 1 9 chr20:33669375:- chr20:38623359:+ . NA TCGA-A7-A6VY-01A-12R-A33J-07 SMAP2-FBXO42 2 5 chr1:40374223:+ chr1:16256759:- INFRAME NA TCGA-A8-A06N-01A-11R-A00Z-07 PRPF19-RAB1B 59 482 chr11:60891103:- chr11:66276504:+ . NA TCGA-A8-A06N-01A-11R-A00Z-07 SDHAF2-RIN1 24 129 chr11:61430182:+ chr11:66333658:- FRAMESHIFT NA TCGA-A8-A06N-01A-11R-A00Z-07 CMPK1-SH2D1B 10 32 chr1:47334116:+ chr1:162402802:- FRAMESHIFT NA TCGA-A8-A06N-01A-11R-A00Z-07 OSBP-GAL 3 8 chr11:59608484:- chr11:68690917:+ FRAMESHIFT NA TCGA-A8-A06N-01A-11R-A00Z-07 TMEM245-NAA35 1 4 chr9:109033307:- chr9:85942155:+ . NA TCGA-A8-A06N-01A-11R-A00Z-07 TSC22D4-BCL2L15 1 4 chr7:100474274:- chr1:113881140:- FRAMESHIFT NA TCGA-A8-A06O-01A-11R-A00Z-07 PUM2-HS1BP3 21 63 chr2:20318537:- chr2:20645505:- FRAMESHIFT NA TCGA-A8-A06O-01A-11R-A00Z-07 SUSD6-RAD51B 4 17 chr14:69611828:+ chr14:68291884:+ . NA TCGA-A8-A06O-01A-11R-A00Z-07 IFITM10-DENND5A 5 12 chr11:1747667:- chr11:9193681:- FRAMESHIFT NA TCGA-A8-A06O-01A-11R-A00Z-07 PRIM2-MAD2L1BP 3 4 chr6:57382168:+ chr6:43640021:+ INFRAME NA TCGA-A8-A06O-01A-11R-A00Z-07 PPFIA1-TMEM229B 1 7 chr11:70356254:+ chr14:67487172:- . NA TCGA-A8-A06O-01A-11R-A00Z-07 MRPL48-DTX4 1 2 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A06P-01A-11R-A00Z-07 NEDD4L-TLN2 5 11 chr18:58044708:+ chr15:62770964:+ INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 NR2C2-ASCC1 110 306 chr3:15013789:+ chr10:72097450:- INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 XPC-RCOR1 24 84 chr3:14168257:- chr14:102710935:+ INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 FAM111A-RNU6-246P 16 48 chr11:59152938:+ chr9:15544244:+ . NA TCGA-A8-A06Q-01A-11R-A034-07 PCNX3-SNX32 11 55 chr11:65630604:+ chr11:65849478:+ INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 ANKRD28-EYS 3 30 chr3:15814240:- chr6:65495993:- . NA TCGA-A8-A06Q-01A-11R-A034-07 APOPT1-ATP9A 4 16 chr14:103574170:+ chr20:51697482:- INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 FANCD2-CINP 5 10 chr3:10046723:+ chr14:102355897:- FRAMESHIFT NA TCGA-A8-A06Q-01A-11R-A034-07 GREB1L-CEP192 6 6 chr18:21242393:+ chr18:13100305:+ . NA TCGA-A8-A06Q-01A-11R-A034-07 MKRN2-FOLH1 6 6 chr3:12557176:+ chr11:49206172:- FRAMESHIFT NA TCGA-A8-A06Q-01A-11R-A034-07 SSH2-KLHL28 4 11 chr17:29929938:- chr14:44945928:- INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 TMTC2-PPFIA2 3 13 chr12:83061831:+ chr12:81457866:- INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 VPS41-ELMO1 4 3 chr7:38754702:- chr7:37013435:- FRAMESHIFT NA TCGA-A8-A06Q-01A-11R-A034-07 PPA1-MGAT4C 2 10 chr10:70217812:- chr12:85989552:- . NA TCGA-A8-A06Q-01A-11R-A034-07 RPS29-MAP3K3 1 6 chr14:49585950:- chr17:63646034:+ INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 C10orf11-NRG3 1 3 chr10:76324485:+ chr10:82951469:+ INFRAME NA TCGA-A8-A06Q-01A-11R-A034-07 SUZ12-TAC4 1 3 chr17:31993333:+ chr17:49844157:- INFRAME NA TCGA-A8-A06R-01A-11R-A00Z-07 NAV1-MROH3P 4 14 chr1:201740076:+ chr1:200965031:+ . NA TCGA-A8-A06R-01A-11R-A00Z-07 PATJ-CACHD1 3 5 chr1:61927829:+ chr1:64647801:+ INFRAME NA TCGA-A8-A06R-01A-11R-A00Z-07 PLCB3-BAD 3 5 chr11:64260234:+ chr11:64271803:- INFRAME NA TCGA-A8-A06R-01A-11R-A00Z-07 RPS6KA2-FGFR1OP 3 2 chr6:166858200:- chr6:167010813:+ INFRAME NA TCGA-A8-A06R-01A-11R-A00Z-07 ERC1-UTRN 2 3 chr12:1444750:+ chr6:144730357:+ INFRAME NA TCGA-A8-A06R-01A-11R-A00Z-07 RPN2-STK17A 1 1 chr20:37204901:+ chr7:43595901:+ FRAMESHIFT NA TCGA-A8-A06T-01A-11R-A00Z-07 ASCC3-ATL1 2 15 chr6:100605568:- chr14:50628031:+ FRAMESHIFT NA TCGA-A8-A06T-01A-11R-A00Z-07 KAT6A-IKBKB 3 10 chr8:42048378:- chr8:42288634:+ INFRAME NA TCGA-A8-A06U-01A-11R-A00Z-07 TOPBP1-NEK11 52 81 chr3:133637876:- chr3:131349557:+ FRAMESHIFT NA TCGA-A8-A06U-01A-11R-A00Z-07 ZBTB20-CD96 16 111 chr3:115100175:- chr3:111647543:+ . NA TCGA-A8-A06U-01A-11R-A00Z-07 MARK3-FRG1CP 26 46 chr14:103428440:+ chr20:28586403:- . NA TCGA-A8-A06U-01A-11R-A00Z-07 LINC-PINT-RCHY1 19 60 chr7:131107720:- chr4:75509296:- . NA TCGA-A8-A06U-01A-11R-A00Z-07 GTF2H1-HPS5 10 43 chr11:18322740:+ chr11:18296984:- . NA TCGA-A8-A06U-01A-11R-A00Z-07 ATP6V1A-OPA1 7 46 chr3:113747113:+ chr3:193631612:+ . NA TCGA-A8-A06U-01A-11R-A00Z-07 CNOT4-ENAM 1 57 chr7:135509889:- chr4:70681499:+ . NA TCGA-A8-A06U-01A-11R-A00Z-07 CHD2-HOMER2 7 31 chr15:92953573:+ chr15:82864259:- INFRAME NA TCGA-A8-A06U-01A-11R-A00Z-07 HPS5-SETD5 9 10 chr11:18296798:- chr3:9424467:+ . NA TCGA-A8-A06U-01A-11R-A00Z-07 YWHAE-TUSC5 6 18 chr17:1400047:- chr17:1295491:+ FRAMESHIFT NA TCGA-A8-A06U-01A-11R-A00Z-07 LPP-ABHD17C 5 19 chr3:188225527:+ chr15:80754151:+ . NA TCGA-A8-A06U-01A-11R-A00Z-07 NUMA1-ADARB2 5 17 chr11:72023065:- chr10:1217119:- FRAMESHIFT NA TCGA-A8-A06U-01A-11R-A00Z-07 SSR3-TRPC1 3 18 chr3:156554957:- chr3:142802169:+ FRAMESHIFT NA TCGA-A8-A06U-01A-11R-A00Z-07 CUL5-SHANK2 5 7 chr11:108054955:+ chr11:71119032:- INFRAME NA TCGA-A8-A06U-01A-11R-A00Z-07 PODXL-ZNF467 4 6 chr7:131503984:- chr7:149764678:- . NA TCGA-A8-A06U-01A-11R-A00Z-07 MTCH2-RAG2 1 12 chr11:47630555:- chr11:36594195:- . NA TCGA-A8-A06U-01A-11R-A00Z-07 NUP98-TMEM117 2 8 chr11:3753316:- chr12:44376595:+ FRAMESHIFT NA TCGA-A8-A06U-01A-11R-A00Z-07 MARK3-BAG5 1 6 chr14:103428440:+ chr14:103561192:- FRAMESHIFT NA TCGA-A8-A06U-01A-11R-A00Z-07 HPS5-ANO5 1 4 chr11:18322133:- chr11:22203804:+ . NA TCGA-A8-A06U-01A-11R-A00Z-07 KMT2C-RHEB 1 3 chr7:152185558:- chr7:151491014:- FRAMESHIFT Likely Oncogenic NA TCGA-A8-A06U-01A-11R-A00Z-07 PCMTD1-FBXO3 1 2 chr8:51845661:- chr11:33742084:- INFRAME NA TCGA-A8-A06X-01A-21R-A00Z-07 OAS3-RPH3A 3 8 chr12:112966029:+ chr12:112887797:+ FRAMESHIFT NA TCGA-A8-A06X-01A-21R-A00Z-07 SUZ12P1-ACSF2 1 9 chr17:30759539:+ chr17:50472428:+ . NA TCGA-A8-A06X-01A-21R-A00Z-07 CRLS1-SEL1L2 2 3 chr20:6009912:+ chr20:13919123:- FRAMESHIFT NA TCGA-A8-A06Y-01A-21R-A00Z-07 KIAA0368-WNK2 1 2 chr9:111484116:- chr9:93229696:+ FRAMESHIFT NA TCGA-A8-A06Z-01A-11R-A00Z-07 TMEM135-CLMP 11 34 chr11:87091395:+ chr11:123084713:- INFRAME NA TCGA-A8-A06Z-01A-11R-A00Z-07 PDPK2P-MAPK8IP3 11 27 chr16:2633739:- chr16:1759958:+ . NA TCGA-A8-A06Z-01A-11R-A00Z-07 ARHGAP32-AHNAK 6 28 chr11:129123446:- chr11:62433891:- INFRAME NA TCGA-A8-A06Z-01A-11R-A00Z-07 SLC43A2-SMG6 7 23 chr17:1613195:- chr17:2283735:- INFRAME NA TCGA-A8-A06Z-01A-11R-A00Z-07 SHROOM3-JCHAIN 5 25 chr4:76586469:+ chr4:70666514:- . NA TCGA-A8-A06Z-01A-11R-A00Z-07 USP22-SPACA3 3 9 chr17:21042665:- chr17:32996843:+ FRAMESHIFT NA TCGA-A8-A06Z-01A-11R-A00Z-07 TMEM219-CPB1 1000 1000 chr16:29971778:+ chr3:148840702:+ . NA TCGA-A8-A076-01A-21R-A00Z-07 LRRC37B-SUZ12 10 17 chr17:32022825:+ chr17:31998658:+ INFRAME NA TCGA-A8-A076-01A-21R-A00Z-07 PCBP2-EEA1 5 20 chr12:53479531:+ chr12:92864987:- . NA TCGA-A8-A076-01A-21R-A00Z-07 KAT7-AXIN2 3 14 chr17:49792033:+ chr17:65558736:- . Likely Oncogenic NA TCGA-A8-A076-01A-21R-A00Z-07 MED24-CEP112 3 13 chr17:40053298:- chr17:65961598:- FRAMESHIFT NA TCGA-A8-A076-01A-21R-A00Z-07 TANC2-ANKFN1 5 4 chr17:63389544:+ chr17:56440327:+ FRAMESHIFT NA TCGA-A8-A076-01A-21R-A00Z-07 DDX42-B4GALNT2 1 9 chr17:63811173:+ chr17:49152800:+ FRAMESHIFT NA TCGA-A8-A076-01A-21R-A00Z-07 MRPL48-DTX4 2 2 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 EPB41L1-GHRH 65 509 chr20:36112480:+ chr20:37256908:- . NA TCGA-A8-A079-01A-21R-A00Z-07 SYNE2-KIAA0391 73 363 chr14:63986617:+ chr14:35266727:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 PHF20-RPN2 28 92 chr20:35941047:+ chr20:37184180:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 MBTD1-MYO7A 28 47 chr17:51217334:- chr11:77192051:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 INTS4-EMSY 12 35 chr11:77901421:- chr11:76542216:+ FRAMESHIFT NA TCGA-A8-A079-01A-21R-A00Z-07 GALNT2-KIF26B 8 22 chr1:230203290:+ chr1:245684233:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 PPP4R3A-FBXO34 7 21 chr14:91509506:- chr14:55350381:+ . NA TCGA-A8-A079-01A-21R-A00Z-07 ADAP2-USP36 3 35 chr17:30926918:+ chr17:78787658:- . NA TCGA-A8-A079-01A-21R-A00Z-07 HIVEP2-SMOC2 6 20 chr6:142945944:- chr6:168598818:+ . NA TCGA-A8-A079-01A-21R-A00Z-07 TRPC4AP-PPFIA1 6 10 chr20:35069296:- chr11:70272173:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 FAM168A-TPCN2 4 17 chr11:73406615:- chr11:69135435:+ . NA TCGA-A8-A079-01A-21R-A00Z-07 SPIDR-RGS20 4 6 chr8:47294030:+ chr8:53954076:+ INFRAME NA TCGA-A8-A079-01A-21R-A00Z-07 INTS4-SLCO2B1 3 4 chr11:77901421:- chr11:75162655:+ FRAMESHIFT NA TCGA-A8-A079-01A-21R-A00Z-07 PELI1-ACTG2 3 3 chr2:64104701:- chr2:73901276:+ . NA TCGA-A8-A079-01A-21R-A00Z-07 SLCO2B1-CEP128 2 3 chr11:75165949:+ chr14:80900029:- FRAMESHIFT NA TCGA-A8-A079-01A-21R-A00Z-07 TPD52-NECAB1 2 1 chr8:80171425:- chr8:90801691:+ FRAMESHIFT NA TCGA-A8-A079-01A-21R-A00Z-07 POLR3K-L3MBTL4 1 4 chr16:51558:- chr18:6215835:- INFRAME NA TCGA-A8-A07B-01A-11R-A00Z-07 GPATCH8-NPLOC4 3 37 chr17:44435065:- chr17:81629805:- INFRAME NA TCGA-A8-A07B-01A-11R-A00Z-07 XRRA1-FAM168A 1 40 chr11:74933801:- chr11:73430770:- FRAMESHIFT NA TCGA-A8-A07E-01A-11R-A034-07 CANT1-SEPT9 4 14 chr17:79005372:- chr17:77488240:+ . NA TCGA-A8-A07E-01A-11R-A034-07 FCHSD2-PLEKHB1 1 5 chr11:73140031:- chr11:73660753:+ INFRAME NA TCGA-A8-A07F-01A-11R-A00Z-07 LRP11-ULBP2 2 16 chr6:149826264:- chr6:149948723:+ . NA TCGA-A8-A07G-01A-11R-A034-07 TBL1XR1-USP13 35 475 chr3:177046129:- chr3:179761112:+ INFRAME NA TCGA-A8-A07G-01A-11R-A034-07 RPRD1A-SLC39A6 7 27 chr18:36067254:- chr18:36127016:- . NA TCGA-A8-A07G-01A-11R-A034-07 UBE3A-CYP19A1 7 16 chr15:25405461:- chr15:51242950:- . NA TCGA-A8-A07G-01A-11R-A034-07 INTS11-MXRA8 6 16 chr1:1320456:- chr1:1354232:- FRAMESHIFT NA TCGA-A8-A07G-01A-11R-A034-07 ZFAND3-THEGL 2 8 chr6:37929999:+ chr4:56548790:+ INFRAME NA TCGA-A8-A07I-01A-11R-A00Z-07 SCD-GPR19 26 122 chr10:100348346:+ chr12:12662470:- . NA TCGA-A8-A07I-01A-11R-A00Z-07 SPOP-XYLT2 7 35 chr17:49677933:- chr17:50353630:+ . Likely Oncogenic NA TCGA-A8-A07I-01A-11R-A00Z-07 ACSF2-SPAG9 6 29 chr17:50426389:+ chr17:51014353:- INFRAME NA TCGA-A8-A07I-01A-11R-A00Z-07 CDK8-IKZF3 7 22 chr13:26254769:+ chr17:39832151:- FRAMESHIFT NA TCGA-A8-A07I-01A-11R-A00Z-07 LASP1-ARHGAP23 1 41 chr17:38870258:+ chr17:38458102:+ INFRAME NA TCGA-A8-A07I-01A-11R-A00Z-07 ASH1L-AIM2 1 26 chr1:155562153:- chr1:159068701:- . NA TCGA-A8-A07I-01A-11R-A00Z-07 AKAP1-ANKFN1 6 4 chr17:57085398:+ chr17:56350766:+ . NA TCGA-A8-A07I-01A-11R-A00Z-07 ADCK2-DPP6 2 13 chr7:140690813:+ chr7:154637821:+ INFRAME NA TCGA-A8-A07I-01A-11R-A00Z-07 CAPN8-HHAT 2 11 chr1:223553832:- chr1:210674288:+ FRAMESHIFT NA TCGA-A8-A07I-01A-11R-A00Z-07 NDUFB2-DPP6 2 8 chr7:140690813:+ chr7:154637821:+ . NA TCGA-A8-A07I-01A-11R-A00Z-07 SOCS7-SRCIN1 1 11 chr17:38377842:+ chr17:38549210:- INFRAME NA TCGA-A8-A07J-01A-11R-A00Z-07 GTPBP2-HIST1H2BJ 2 8 chr6:43622003:- chr6:27126462:- FRAMESHIFT NA TCGA-A8-A07L-01A-11R-A00Z-07 AKAP8-VMP1 14 90 chr19:15358967:- chr17:59764971:+ INFRAME NA TCGA-A8-A07L-01A-11R-A00Z-07 MCM10-OPTN 12 75 chr10:13183100:+ chr10:13112453:+ INFRAME NA TCGA-A8-A07L-01A-11R-A00Z-07 GDAP2-SPAG17 6 55 chr1:117929448:- chr1:117996743:- . NA TCGA-A8-A07L-01A-11R-A00Z-07 SLC25A17-ST13 2 57 chr22:40819195:- chr22:40844909:- FRAMESHIFT NA TCGA-A8-A07L-01A-11R-A00Z-07 MAST3-ARRDC2 6 25 chr19:18110741:+ chr19:18012913:+ . NA TCGA-A8-A07L-01A-11R-A00Z-07 LRBA-CASP12 2 27 chr4:150683551:- chr11:104897468:- FRAMESHIFT NA TCGA-A8-A07L-01A-11R-A00Z-07 TRERF1-MRPL14 2 24 chr6:42451177:- chr6:44116629:- . NA TCGA-A8-A07L-01A-11R-A00Z-07 SYNE2-MIPOL1 5 7 chr14:63853143:+ chr14:37422855:+ . NA TCGA-A8-A07O-01A-11R-A00Z-07 ELOA-IFT140 66 93 chr1:23754460:+ chr16:1558134:- INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 MYO9A-TMEM59 31 128 chr15:71916370:- chr1:54043525:- INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 SSR2-ACOT11 16 65 chr1:156018132:- chr1:54607942:+ . NA TCGA-A8-A07O-01A-11R-A00Z-07 MTR-IFI16 14 56 chr1:236838599:+ chr1:159049432:+ INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 POLR2A-SLC16A13 15 39 chr17:7496073:+ chr17:7038152:+ INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 SCYL2-FAM71C 10 20 chr12:100283147:+ chr12:99649288:+ INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 LIMK2-RUFY1 5 14 chr22:31225819:+ chr5:179580947:+ INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 RAB1A-SPRED2 7 5 chr2:65129893:- chr2:65316883:- FRAMESHIFT NA TCGA-A8-A07O-01A-11R-A00Z-07 URI1-POP4 3 11 chr19:29942664:+ chr19:29606196:+ . NA TCGA-A8-A07O-01A-11R-A00Z-07 ASCC1-MICU1 1 7 chr10:72133057:- chr10:72375872:- INFRAME NA TCGA-A8-A07O-01A-11R-A00Z-07 WDR59-CHST6 1 5 chr16:74903947:- chr16:75490769:- . NA TCGA-A8-A07P-01A-11R-A00Z-07 PCMTD1-WRN 11 51 chr8:51898930:- chr8:31141430:+ FRAMESHIFT NA TCGA-A8-A07P-01A-11R-A00Z-07 MRPL48-DTX4 1 5 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A07U-01A-11R-A034-07 SUCO-DNM3 16 54 chr1:172591071:+ chr1:172379018:+ INFRAME NA TCGA-A8-A07U-01A-11R-A034-07 ZNF865-AXL 16 21 chr19:55605732:+ chr19:41242883:+ . NA TCGA-A8-A07U-01A-11R-A034-07 MFSD1-GFM1 6 19 chr3:158827337:+ chr3:158681995:+ INFRAME NA TCGA-A8-A07U-01A-11R-A034-07 PPTC7-ALS2CR12 3 23 chr12:110582809:- chr2:201330522:- INFRAME NA TCGA-A8-A07U-01A-11R-A034-07 SCUBE3-ANKS1A 2 13 chr6:35228739:+ chr6:35082691:+ FRAMESHIFT NA TCGA-A8-A07U-01A-11R-A034-07 PPP2R3C-NFKBIA 2 4 chr14:35087951:- chr14:35402060:- INFRAME NA TCGA-A8-A07W-01A-11R-A00Z-07 SHANK2-CPT1A 28 57 chr11:71224697:- chr11:68815487:- . NA TCGA-A8-A07W-01A-11R-A00Z-07 PRPF19-DDB1 21 75 chr11:60900582:- chr11:61324137:- INFRAME NA TCGA-A8-A07W-01A-11R-A00Z-07 RABEP1-RORB 11 14 chr17:5346925:+ chr9:74630282:+ INFRAME NA TCGA-A8-A07W-01A-11R-A00Z-07 SH3GL1-TAX1BP1 4 32 chr19:4400324:- chr7:27827738:+ INFRAME NA TCGA-A8-A07W-01A-11R-A00Z-07 STIM1-FITM2 1 31 chr11:4082351:+ chr20:44307240:- FRAMESHIFT NA TCGA-A8-A07W-01A-11R-A00Z-07 PLEKHA5-ST8SIA1 4 14 chr12:19132450:+ chr12:22287293:- INFRAME NA TCGA-A8-A07W-01A-11R-A00Z-07 EAF1-BTD 2 12 chr3:15427882:+ chr3:15635424:+ FRAMESHIFT NA TCGA-A8-A07W-01A-11R-A00Z-07 KIF16B-HIPK3 2 4 chr20:16507958:- chr11:33347293:+ FRAMESHIFT NA TCGA-A8-A07W-01A-11R-A00Z-07 DLEU1-DPH6 1 4 chr13:50083194:+ chr15:35410896:- . NA TCGA-A8-A081-01A-11R-A00Z-07 DNAJC1-DCLRE1C 91 364 chr10:21882282:- chr10:14899312:- FRAMESHIFT NA TCGA-A8-A081-01A-11R-A00Z-07 TANC2-ZNF689 4 17 chr17:63415674:+ chr16:30623869:- . NA TCGA-A8-A081-01A-11R-A00Z-07 ERLIN2-ADRB3 3 20 chr8:37753710:+ chr8:37966222:- . NA TCGA-A8-A081-01A-11R-A00Z-07 SHANK2-NRXN2 2 17 chr11:71252425:- chr11:64697792:- . NA TCGA-A8-A081-01A-11R-A00Z-07 KDM2A-CCDC170 2 5 chr11:67121358:+ chr6:151615443:+ INFRAME NA TCGA-A8-A081-01A-11R-A00Z-07 PC-DCDC2 1 4 chr11:66863774:- chr6:24205102:- FRAMESHIFT NA TCGA-A8-A083-01A-21R-A00Z-07 CAND1-WDR38 3 1 chr12:67311762:+ chr9:124857738:+ . NA TCGA-A8-A086-01A-11R-A00Z-07 NUMA1-PTH 7 32 chr11:72080458:- chr11:13496173:- . NA TCGA-A8-A086-01A-11R-A00Z-07 INTS4-PPFIA1 3 19 chr11:77978996:- chr11:70372215:+ INFRAME NA TCGA-A8-A086-01A-11R-A00Z-07 CNEP1R1-ANK1 4 7 chr16:50026467:+ chr8:41758137:- FRAMESHIFT NA TCGA-A8-A086-01A-11R-A00Z-07 YAP1-STIM1 2 12 chr11:102209564:+ chr11:4023873:+ INFRAME Likely Oncogenic NA TCGA-A8-A086-01A-11R-A00Z-07 MRPL48-DTX4 3 4 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A086-01A-11R-A00Z-07 PLEKHB1-NUMA1 2 3 chr11:73651890:+ chr11:72024353:- INFRAME NA TCGA-A8-A086-01A-11R-A00Z-07 CPT1A-GDPD4 1 6 chr11:68804000:- chr11:77287420:- . NA TCGA-A8-A086-01A-11R-A00Z-07 ATG13-TSPAN18 1 1 chr11:46618375:+ chr11:44860328:+ . NA TCGA-A8-A08B-01A-11R-A00Z-07 RARA-PGAP3 3 20 chr17:40318448:+ chr17:39686019:- . NA TCGA-A8-A08B-01A-11R-A00Z-07 NSMCE2-SNTB1 1 12 chr8:125151277:+ chr8:120575225:- INFRAME NA TCGA-A8-A08B-01A-11R-A00Z-07 CACNB1-RPL19 1 6 chr17:39184784:- chr17:39202317:+ FRAMESHIFT NA TCGA-A8-A08G-01A-11R-A00Z-07 CPT1A-CHKA 80 318 chr11:68761535:- chr11:68054047:- INFRAME NA TCGA-A8-A08G-01A-11R-A00Z-07 IPO7-RENBP 64 121 chr11:9408639:+ chrX:153935576:- FRAMESHIFT NA TCGA-A8-A08G-01A-11R-A00Z-07 SNRPA1-PHRF1 15 27 chr15:101291962:- chr11:601574:+ FRAMESHIFT NA TCGA-A8-A08G-01A-11R-A00Z-07 ENOX2-OSBPL5 8 20 chrX:130627958:- chr11:3129169:- . NA TCGA-A8-A08G-01A-11R-A00Z-07 UBAP2-TEAD1 3 28 chr9:33996223:- chr11:12879708:+ INFRAME NA TCGA-A8-A08G-01A-11R-A00Z-07 DENND5A-PGPEP1L 6 8 chr11:9264961:- chr15:98998163:- INFRAME NA TCGA-A8-A08G-01A-11R-A00Z-07 METTL16-KDM6B 3 18 chr17:2464208:- chr17:7845872:+ INFRAME NA TCGA-A8-A08G-01A-11R-A00Z-07 PCSK6-DNM1P49 1 26 chr15:101382092:- chr15:75791758:- . NA TCGA-A8-A08G-01A-11R-A00Z-07 SBF2-GVINP2 4 14 chr11:10193902:- chr11:6748177:+ . NA TCGA-A8-A08G-01A-11R-A00Z-07 MTMR1-FATE1 1 20 chrX:150718700:+ chrX:151721395:+ FRAMESHIFT NA TCGA-A8-A08G-01A-11R-A00Z-07 SBF2-PGAP2 1 6 chr11:9989497:- chr11:3823883:+ INFRAME NA TCGA-A8-A08I-01A-11R-A00Z-07 KATNA1-PPP2R1A 44 103 chr6:149601594:- chr19:52216529:+ INFRAME NA TCGA-A8-A08I-01A-11R-A00Z-07 ZNF675-IGSF23 11 108 chr19:23687031:- chr19:44618115:+ FRAMESHIFT NA TCGA-A8-A08I-01A-11R-A00Z-07 RNF38-GLIPR2 10 56 chr9:36400554:- chr9:36162362:+ . NA TCGA-A8-A08I-01A-11R-A00Z-07 C1orf112-RPL5 11 44 chr1:169798958:+ chr1:92837456:+ FRAMESHIFT NA TCGA-A8-A08I-01A-11R-A00Z-07 EMC10-MBOAT7 13 27 chr19:50480977:+ chr19:54188511:- . NA TCGA-A8-A08I-01A-11R-A00Z-07 FAM168A-DNAJB13 12 24 chr11:73597923:- chr11:73958317:+ . NA TCGA-A8-A08I-01A-11R-A00Z-07 ZCCHC7-GLIPR2 6 37 chr9:37126942:+ chr9:36162362:+ INFRAME NA TCGA-A8-A08I-01A-11R-A00Z-07 MTF2-GPSM2 4 37 chr1:93079531:+ chr1:108885275:+ . NA TCGA-A8-A08I-01A-11R-A00Z-07 BRF1-FOXN3 7 21 chr14:105247071:- chr14:89412490:- . NA TCGA-A8-A08I-01A-11R-A00Z-07 SEMA6A-LSM6 7 15 chr5:116486749:- chr4:146182912:+ . NA TCGA-A8-A08I-01A-11R-A00Z-07 XPR1-TYW3 5 20 chr1:180682411:+ chr1:74736542:+ FRAMESHIFT NA TCGA-A8-A08I-01A-11R-A00Z-07 EFCAB11-ASB2 5 12 chr14:89931541:- chr14:93954483:- INFRAME NA TCGA-A8-A08I-01A-11R-A00Z-07 TRMT10B-AR 3 13 chr9:37776405:+ chrX:67686010:+ INFRAME NA TCGA-A8-A08I-01A-11R-A00Z-07 BLNK-ZNF536 2 15 chr10:96242735:- chr19:30534847:+ INFRAME NA TCGA-A8-A08I-01A-11R-A00Z-07 SLC25A51-GLIPR2 2 14 chr9:37903531:- chr9:36162362:+ . NA TCGA-A8-A08I-01A-11R-A00Z-07 CLTA-ZCCHC7 2 10 chr9:36204179:+ chr9:37302188:+ FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 MIR181A1HG-MFSD4A 79 145 chr1:198937226:- chr1:205579751:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 PSMD11-CEP112 57 141 chr17:32447046:+ chr17:66183307:- . NA TCGA-A8-A08J-01A-11R-A00Z-07 BCAS3-VMP1 25 101 chr17:60910702:+ chr17:59817712:+ INFRAME NA TCGA-A8-A08J-01A-11R-A00Z-07 UBE2G1-SPNS3 18 115 chr17:4366271:- chr17:4478572:+ FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 PWP2-SFSWAP 6 21 chr21:44117963:+ chr12:131786463:+ INFRAME NA TCGA-A8-A08J-01A-11R-A00Z-07 USP32-PSMD12 1 41 chr17:60391882:- chr17:67350336:- FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 MYL6-DGKA 4 21 chr12:56163011:+ chr12:55952088:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 MED1-NSF 6 11 chr17:39447798:- chr17:46674414:+ FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 GOSR2-RHOT1 5 11 chr17:46949347:+ chr17:32200956:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 PGS1-TM9SF1 2 17 chr17:78400855:+ chr14:24193269:- FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 MRPL48-DTX4 5 4 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A08J-01A-11R-A00Z-07 SPATA13-PRRC2C 2 15 chr13:24300475:+ chr1:171524821:+ FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 PTRH2-RHBDL3 4 2 chr17:59707371:- chr17:32294294:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 RALGAPB-EPB41L1 2 10 chr20:38518000:+ chr20:36173764:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 NCOR1-ZNF287 3 4 chr17:16186554:- chr17:16553426:- FRAMESHIFT Likely Oncogenic NA TCGA-A8-A08J-01A-11R-A00Z-07 CCDC57-RBFOX3 1 8 chr17:82127692:- chr17:79482598:- . NA TCGA-A8-A08J-01A-11R-A00Z-07 FRYL-LNX1 1 8 chr4:48710519:- chr4:53696139:- . NA TCGA-A8-A08J-01A-11R-A00Z-07 CBX1-DHX40 1 5 chr17:48101268:- chr17:59566627:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 PRKCA-PHB 2 1 chr17:66306127:+ chr17:49413291:- . NA TCGA-A8-A08J-01A-11R-A00Z-07 PUS1-ICOSLG 2 1 chr12:131932312:+ chr21:44238488:- FRAMESHIFT NA TCGA-A8-A08J-01A-11R-A00Z-07 QSOX1-NFASC 1 3 chr1:180166591:+ chr1:204920632:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 RHOH-N4BP2 1 2 chr4:40197300:+ chr4:40142724:+ . NA TCGA-A8-A08J-01A-11R-A00Z-07 PITPNC1-CA10 1 1 chr17:67632238:+ chr17:51653736:- INFRAME NA TCGA-A8-A08L-01A-11R-A00Z-07 WASH5P-FAM107B 16 13 chr19:66346:- chr10:14522019:- . NA TCGA-A8-A08L-01A-11R-A00Z-07 IPO11-TNFAIP8 9 25 chr5:62474464:+ chr5:119392816:+ INFRAME NA TCGA-A8-A08L-01A-11R-A00Z-07 CTBP2-ADAM12 2 34 chr10:125110990:- chr10:126330509:- . NA TCGA-A8-A08L-01A-11R-A00Z-07 DAP3-ATF3 5 13 chr1:155717128:+ chr1:212615018:+ INFRAME NA TCGA-A8-A08L-01A-11R-A00Z-07 HNRNPM-GVINP2 3 8 chr19:8445111:+ chr11:6748177:+ . NA TCGA-A8-A08L-01A-11R-A00Z-07 CASK-EYA2 1 5 chrX:41739384:- chr20:46990001:+ . NA TCGA-A8-A08L-01A-11R-A00Z-07 SBF2-TMEM99 1 3 chr11:10193902:- chr17:40833115:+ . NA TCGA-A8-A08O-01A-21R-A056-07 FOXK2-MYO18A 29 71 chr17:82587272:+ chr17:29082438:- INFRAME NA TCGA-A8-A08O-01A-21R-A056-07 DOCK1-NPS 14 28 chr10:127343746:+ chr10:127549489:+ INFRAME NA TCGA-A8-A08O-01A-21R-A056-07 AGAP1-WDR11 10 31 chr2:235494849:+ chr10:120900029:+ INFRAME NA TCGA-A8-A08O-01A-21R-A056-07 MMD-PRKCA 7 6 chr17:55421670:- chr17:66732688:+ FRAMESHIFT NA TCGA-A8-A08O-01A-21R-A056-07 MRPL12-USP32 6 10 chr17:81704716:+ chr17:60345608:- FRAMESHIFT NA TCGA-A8-A08O-01A-21R-A056-07 YPEL2-SDF2 4 17 chr17:59353526:+ chr17:28655483:- FRAMESHIFT NA TCGA-A8-A08O-01A-21R-A056-07 APPBP2-PECAM1 2 15 chr17:60525794:- chr17:64323845:- INFRAME NA TCGA-A8-A08O-01A-21R-A056-07 ITGB4-NARF 2 7 chr17:75757107:+ chr17:82468764:+ FRAMESHIFT NA TCGA-A8-A08P-01A-11R-A00Z-07 APP-RCAN1 13 69 chr21:26111979:- chr21:34523710:- INFRAME NA TCGA-A8-A08P-01A-11R-A00Z-07 PCCB-DLG1 5 27 chr3:136329984:+ chr3:197194589:- INFRAME NA TCGA-A8-A08P-01A-11R-A00Z-07 SETD1B-TMEM120B 6 15 chr12:121819490:+ chr12:121776369:+ . NA TCGA-A8-A08P-01A-11R-A00Z-07 MSL2-PPP2R3A 6 6 chr3:136194972:- chr3:136145043:+ FRAMESHIFT NA TCGA-A8-A08P-01A-11R-A00Z-07 SLC20A2-HIP1 3 14 chr8:42428758:- chr7:75542974:- INFRAME NA TCGA-A8-A08P-01A-11R-A00Z-07 PRRG2-FCGRT 4 7 chr19:49583952:+ chr19:49524507:+ INFRAME NA TCGA-A8-A08P-01A-11R-A00Z-07 GMPR-NDUFAF6 2 9 chr6:16254735:+ chr8:95031995:+ FRAMESHIFT NA TCGA-A8-A08P-01A-11R-A00Z-07 BRWD1-LCA5L 2 7 chr21:39213481:- chr21:39429211:- . NA TCGA-A8-A08P-01A-11R-A00Z-07 UBE2G1-CXCL16 1 4 chr17:4366271:- chr17:4735508:- INFRAME NA TCGA-A8-A08R-01A-11R-A034-07 PUM1-ZNF890P 16 41 chr1:30974651:- chr7:5127743:- . NA TCGA-A8-A08R-01A-11R-A034-07 TMEM181-HMGCLL1 16 17 chr6:158608750:+ chr6:55439559:- FRAMESHIFT NA TCGA-A8-A08R-01A-11R-A034-07 SS18L1-GID8 12 32 chr20:62159961:+ chr20:62943495:+ INFRAME NA TCGA-A8-A08R-01A-11R-A034-07 LMNB2-GNG7 11 31 chr19:2444404:- chr19:2555188:- . NA TCGA-A8-A08R-01A-11R-A034-07 SLC25A13-STK31 1 9 chr7:96277196:- chr7:23752717:+ FRAMESHIFT NA TCGA-A8-A08R-01A-11R-A034-07 CABLES1-RBBP8 1 2 chr18:23136607:+ chr18:22968806:+ INFRAME NA TCGA-A8-A08R-01A-11R-A034-07 NAA20-RIN2 1 1 chr20:20017449:+ chr20:19964952:+ FRAMESHIFT NA TCGA-A8-A08T-01A-21R-A00Z-07 MTDH-SPIDR 2 10 chr8:97719189:+ chr8:47673801:+ FRAMESHIFT NA TCGA-A8-A08X-01A-21R-A00Z-07 PGAP3-STAC2 74 302 chr17:39687834:- chr17:39217173:- INFRAME NA TCGA-A8-A08X-01A-21R-A00Z-07 MAPKAP1-VAV2 69 274 chr9:125657651:- chr9:133861432:- INFRAME NA TCGA-A8-A08X-01A-21R-A00Z-07 FAM129B-OLFM1 67 112 chr9:127568820:- chr9:135090195:+ FRAMESHIFT NA TCGA-A8-A08X-01A-21R-A00Z-07 SLFN11-MIEN1 20 126 chr17:35373474:- chr17:39730291:- . NA TCGA-A8-A08X-01A-21R-A00Z-07 FAM129B-SEC16A 12 32 chr9:127568820:- chr9:136448161:- FRAMESHIFT NA TCGA-A8-A08X-01A-21R-A00Z-07 MAPKAP1-PRRC2B 8 20 chr9:125657651:- chr9:131430090:+ . NA TCGA-A8-A08X-01A-21R-A00Z-07 NACC2-NUP214 9 13 chr9:136049636:- chr9:131233454:+ INFRAME NA TCGA-A8-A08X-01A-21R-A00Z-07 AP2B1-ERBB2 5 11 chr17:35641975:+ chr17:39688696:+ . NA TCGA-A8-A08X-01A-21R-A00Z-07 TBL1XR1-LXN 3 15 chr3:177032971:- chr3:158671019:- INFRAME NA TCGA-A8-A08X-01A-21R-A00Z-07 PIP4K2B-ERBB2 1 21 chr17:38799266:- chr17:39699537:+ . NA TCGA-A8-A08X-01A-21R-A00Z-07 BRD3-PIP5KL1 3 4 chr9:134067945:- chr9:127927331:- . NA TCGA-A8-A08Z-01A-21R-A00Z-07 SYNE2-DMRTA1 1 2 chr14:64167639:+ chr9:22451064:+ FRAMESHIFT NA TCGA-A8-A091-01A-11R-A00Z-07 TSKU-SFRP4 23 83 chr11:76783404:+ chr7:37926774:- . NA TCGA-A8-A091-01A-11R-A00Z-07 TAF4-CDH22 13 32 chr20:62064451:- chr20:46227627:- INFRAME NA TCGA-A8-A091-01A-11R-A00Z-07 GNAS-CPB1 1 52 chr20:58898985:+ chr3:148828002:+ INFRAME NA TCGA-A8-A091-01A-11R-A00Z-07 ROCK1-LRIG3 2 30 chr18:21045292:- chr12:58914336:- INFRAME NA TCGA-A8-A091-01A-11R-A00Z-07 NCOA5-CDH4 3 16 chr20:46079387:- chr20:61743563:+ FRAMESHIFT NA TCGA-A8-A091-01A-11R-A00Z-07 C2CD3-ABCA13 4 9 chr11:74132844:- chr7:48481036:+ FRAMESHIFT NA TCGA-A8-A091-01A-11R-A00Z-07 EMSY-BBS9 3 10 chr11:76496469:+ chr7:33155638:+ FRAMESHIFT NA TCGA-A8-A091-01A-11R-A00Z-07 DPY19L1-NRXN2 1 8 chr7:35010468:- chr11:64620372:- FRAMESHIFT NA TCGA-A8-A091-01A-11R-A00Z-07 SQSTM1-CPB1 1000 1000 chr5:179836664:+ chr3:148840686:+ . NA TCGA-A8-A091-01A-11R-A00Z-07 RAB40C-CPB1 1000 1000 chr16:628302:+ chr3:148859819:+ . NA TCGA-A8-A092-01A-11R-A00Z-07 DDR1-MRPS18B 2 21 chr6:30892188:+ chr6:30619493:+ INFRAME NA TCGA-A8-A092-01A-11R-A00Z-07 MRPL48-DTX4 3 3 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A093-01A-11R-A00Z-07 MRPL48-DTX4 26 51 chr11:73825796:+ chr11:59204676:+ INFRAME NA TCGA-A8-A094-01A-11R-A00Z-07 ZNRF3-ASCC2 41 214 chr22:28884066:+ chr22:29825257:- INFRAME NA TCGA-A8-A094-01A-11R-A00Z-07 TLK1-SSB 16 61 chr2:171082781:- chr2:169805474:+ INFRAME NA TCGA-A8-A094-01A-11R-A00Z-07 SHTN1-EMX2OS 6 52 chr10:117005022:- chr10:117492109:- . NA TCGA-A8-A094-01A-11R-A00Z-07 SEC16A-QSOX2 5 20 chr9:136459134:- chr9:136211452:- FRAMESHIFT NA TCGA-A8-A094-01A-11R-A00Z-07 ZNF544-SENP6 3 16 chr19:58230462:+ chr6:75675860:+ . NA TCGA-A8-A094-01A-11R-A00Z-07 ZFYVE26-RAD51B 4 6 chr14:67816534:- chr14:68411424:+ . NA TCGA-A8-A094-01A-11R-A00Z-07 SHANK2-BDNF-AS 1 7 chr11:71056481:- chr11:27658241:+ . NA TCGA-A8-A094-01A-11R-A00Z-07 SHANK2-COA4 1 4 chr11:70896501:- chr11:73873394:- FRAMESHIFT NA TCGA-A8-A096-01A-11R-A00Z-07 FNDC3A-ZMYM2 1 1 chr13:49006289:+ chr13:20051433:+ INFRAME NA TCGA-A8-A097-01A-11R-A034-07 TRAM1-ZFPM2 20 107 chr8:70594506:- chr8:105634246:+ INFRAME NA TCGA-A8-A097-01A-11R-A034-07 CARD8-BCKDHA 11 33 chr19:48240962:- chr19:41410637:+ FRAMESHIFT NA TCGA-A8-A097-01A-11R-A034-07 CTTN-MYEOV 5 25 chr11:70414652:+ chr11:69366743:+ . NA TCGA-A8-A097-01A-11R-A034-07 USP22-MMS22L 8 9 chr17:21042665:- chr6:97278898:- FRAMESHIFT NA TCGA-A8-A097-01A-11R-A034-07 ANO1-CYP2R1 7 11 chr11:70078714:+ chr11:14885917:- INFRAME NA TCGA-A8-A097-01A-11R-A034-07 MARCH2-PLVAP 4 8 chr19:8422016:+ chr19:17366195:- FRAMESHIFT NA TCGA-A8-A097-01A-11R-A034-07 LRTOMT-NFIC 2 11 chr11:72089165:+ chr19:3449014:+ INFRAME NA TCGA-A8-A097-01A-11R-A034-07 ZFAND3-SYNE1 2 8 chr6:38116739:+ chr6:152511103:- FRAMESHIFT NA TCGA-A8-A097-01A-11R-A034-07 GPLD1-PCNP 2 3 chr6:24449789:- chr3:101590215:+ INFRAME NA TCGA-A8-A097-01A-11R-A034-07 NAXE-RHBG 1 4 chr1:156591986:+ chr1:156382068:+ FRAMESHIFT NA TCGA-A8-A097-01A-11R-A034-07 KIAA0753-TP53 1 1 chr17:6620788:- chr17:7676622:- . Likely Oncogenic NA TCGA-A8-A09A-01A-11R-A00Z-07 SEC31A-MUC7 37 94 chr4:82856952:- chr4:70472215:+ . NA TCGA-A8-A09A-01A-11R-A00Z-07 VMP1-PSMA6 7 42 chr17:59773885:+ chr14:35317249:+ INFRAME NA TCGA-A8-A09A-01A-11R-A00Z-07 SLC16A5-MRPL58 3 19 chr17:75100816:+ chr17:75019700:+ INFRAME NA TCGA-A8-A09A-01A-11R-A00Z-07 INTS8-DPY19L4 4 10 chr8:94823561:+ chr8:94766612:+ FRAMESHIFT NA TCGA-A8-A09A-01A-11R-A00Z-07 AHNAK-INTS5 3 6 chr11:62491732:- chr11:62649999:- FRAMESHIFT NA TCGA-A8-A09A-01A-11R-A00Z-07 HECTD2-PCGF5 2 9 chr10:91425410:+ chr10:91271638:+ FRAMESHIFT NA TCGA-A8-A09A-01A-11R-A00Z-07 YWHAB-STK4 2 3 chr20:44885886:+ chr20:44987132:+ . NA TCGA-A8-A09A-01A-11R-A00Z-07 ZNF208-ST3GAL4 2 3 chr19:22010792:- chr11:126409268:+ INFRAME NA TCGA-A8-A09A-01A-11R-A00Z-07 LNX1-GABRB1 1 6 chr4:53573623:- chr4:47320127:+ INFRAME NA TCGA-A8-A09A-01A-11R-A00Z-07 PRKDC-GSR 1 6 chr8:47935732:- chr8:30709902:- FRAMESHIFT NA TCGA-A8-A09A-01A-11R-A00Z-07 ZBTB8OS-IGF2BP1 1 5 chr1:32627508:- chr17:49031910:+ INFRAME NA TCGA-A8-A09A-01A-11R-A00Z-07 E2F6-LYRM4 1 4 chr2:11465772:- chr6:5216738:- FRAMESHIFT NA TCGA-A8-A09A-01A-11R-A00Z-07 SDC4-TP53TG5 1 3 chr20:45333023:- chr20:45377613:- INFRAME NA TCGA-A8-A09B-01A-11R-A00Z-07 CTSB-DEFB135 1 8 chr8:11868001:- chr8:11984421:+ . NA TCGA-A8-A09C-01A-11R-A00Z-07 TMEM135-ALDH3B2 46 290 chr11:87038186:+ chr11:67667635:- . NA TCGA-A8-A09C-01A-11R-A00Z-07 CBX4-EFCAB5 45 177 chr17:79837837:- chr17:30091871:+ INFRAME NA TCGA-A8-A09C-01A-11R-A00Z-07 SSH2-NDUFS4 44 131 chr17:29929938:- chr5:53603452:+ INFRAME NA TCGA-A8-A09C-01A-11R-A00Z-07 SPTBN2-GDPD4 22 45 chr11:66696277:- chr11:77287420:- . NA TCGA-A8-A09C-01A-11R-A00Z-07 NARS2-INTS4 5 11 chr11:78528842:- chr11:77879127:- FRAMESHIFT NA TCGA-A8-A09C-01A-11R-A00Z-07 GLCE-SPESP1 1 5 chr15:69160757:+ chr15:68945599:+ . NA TCGA-A8-A09C-01A-11R-A00Z-07 GLCE-NOX5 1 3 chr15:69160757:+ chr15:68974729:+ . NA TCGA-A8-A09D-01A-11R-A00Z-07 ATG13-TSPAN18 13 118 chr11:46617890:+ chr11:44860328:+ . NA TCGA-A8-A09D-01A-11R-A00Z-07 PHF21A-CAMK1D 16 29 chr11:46076754:- chr10:12769673:+ INFRAME NA TCGA-A8-A09D-01A-11R-A00Z-07 SUMF1-CNTN4 8 27 chr3:4417128:- chr3:2988345:+ FRAMESHIFT NA TCGA-A8-A09D-01A-11R-A00Z-07 CAMK1D-TSPAN18 5 25 chr10:12814307:+ chr11:44764426:+ . NA TCGA-A8-A09D-01A-11R-A00Z-07 ARFGEF2-NCOA3 5 11 chr20:48963898:+ chr20:47583183:+ . NA TCGA-A8-A09D-01A-11R-A00Z-07 CLPB-ARMC4 3 19 chr11:72301803:- chr10:27940805:- INFRAME NA TCGA-A8-A09D-01A-11R-A00Z-07 ARFGEF2-TSHZ2 4 9 chr20:48963898:+ chr20:53253499:+ INFRAME NA TCGA-A8-A09D-01A-11R-A00Z-07 LIN7A-NAV3 3 9 chr12:80811465:- chr12:77571859:+ . NA TCGA-A8-A09D-01A-11R-A00Z-07 AZIN1-YME1L1 1 15 chr8:102839650:- chr10:27123699:- FRAMESHIFT NA TCGA-A8-A09D-01A-11R-A00Z-07 HEATR5A-FLJ22447 1 9 chr14:31358637:- chr14:61657605:+ . NA TCGA-A8-A09D-01A-11R-A00Z-07 PEX16-AMBRA1 2 5 chr11:45917458:- chr11:46548500:- . NA TCGA-A8-A09D-01A-11R-A00Z-07 STAT3-ZFPM2 2 3 chr17:42388279:- chr8:105634246:+ . NA TCGA-A8-A09G-01A-21R-A00Z-07 USP32-PCTP 23 94 chr17:60391882:- chr17:55767335:+ FRAMESHIFT NA TCGA-A8-A09G-01A-21R-A00Z-07 KANSL1-PPP1R1B 17 84 chr17:46162477:- chr17:39627306:+ . NA TCGA-A8-A09G-01A-21R-A00Z-07 LRRC8D-C1orf168 14 61 chr1:89843782:+ chr1:56767938:- . NA TCGA-A8-A09G-01A-21R-A00Z-07 ARHGEF12-SIK3 16 42 chr11:120337275:+ chr11:116957064:- FRAMESHIFT NA TCGA-A8-A09G-01A-21R-A00Z-07 BCAS3-PRKAA2 2 29 chr17:60808076:+ chr1:56691394:+ INFRAME NA TCGA-A8-A09I-01A-22R-A034-07 TEX2-WFDC21P 72 605 chr17:64263168:- chr17:60085203:- . NA TCGA-A8-A09I-01A-22R-A034-07 DUSP14-EME1 60 113 chr17:37489952:+ chr17:50375184:+ . NA TCGA-A8-A09I-01A-22R-A034-07 USP32-RN7SL606P 58 120 chr17:60226043:- chr17:60696461:+ . NA TCGA-A8-A09I-01A-22R-A034-07 RARA-MYO1D 37 163 chr17:40331396:+ chr17:32780784:- FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 CLTC-WFDC21P 29 67 chr17:59644483:+ chr17:60085203:- . NA TCGA-A8-A09I-01A-22R-A034-07 MED1-GDPD1 19 80 chr17:39423327:- chr17:59257751:+ INFRAME NA TCGA-A8-A09I-01A-22R-A034-07 C17orf75-TOP2A 10 51 chr17:32335323:- chr17:40413625:- INFRAME NA TCGA-A8-A09I-01A-22R-A034-07 CDK12-PPM1E 8 29 chr17:39471763:+ chr17:58969539:+ FRAMESHIFT Likely Oncogenic NA TCGA-A8-A09I-01A-22R-A034-07 MBTD1-EFCAB3 5 31 chr17:51259143:- chr17:62373814:+ . NA TCGA-A8-A09I-01A-22R-A034-07 STXBP4-MSI2 3 38 chr17:55073076:+ chr17:57615970:+ INFRAME NA TCGA-A8-A09I-01A-22R-A034-07 METTL2B-CA10 7 10 chr7:128480696:+ chr17:51661846:- FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 BCAS3-CASC3 3 20 chr17:60747279:+ chr17:40161753:+ FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 FBXL20-TLK2 4 14 chr17:39343180:- chr17:62560016:+ FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 WIPF2-EZH1 5 10 chr17:40265146:+ chr17:42730918:- . NA TCGA-A8-A09I-01A-22R-A034-07 STXBP4-PPM1D 5 8 chr17:55047154:+ chr17:60623521:+ FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 BCAS3-RAD51C 1 23 chr17:61084564:+ chr17:58694931:+ INFRAME Likely Oncogenic NA TCGA-A8-A09I-01A-22R-A034-07 HEATR6-MIEN1 3 12 chr17:60069711:- chr17:39730291:- FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 AKAP1-WIPF2 4 6 chr17:57085398:+ chr17:40256391:+ . NA TCGA-A8-A09I-01A-22R-A034-07 NCK2-SFXN5 3 5 chr2:105855289:+ chr2:72971685:- INFRAME NA TCGA-A8-A09I-01A-22R-A034-07 DHX40-SCN4A 1 11 chr17:59602616:+ chr17:63947167:- FRAMESHIFT NA TCGA-A8-A09I-01A-22R-A034-07 LRP5-DLG2 1 6 chr11:68390052:+ chr11:83965468:- INFRAME NA TCGA-A8-A09I-01A-22R-A034-07 BRIP1-UTP18 1 2 chr17:61847101:- chr17:51288029:+ INFRAME Likely Oncogenic NA TCGA-A8-A09M-01A-11R-A00Z-07 HIBCH-CTNNA2 6 17 chr2:190310754:- chr2:80393211:+ INFRAME NA TCGA-A8-A09M-01A-11R-A00Z-07 RHOH-CHRNA9 2 3 chr4:40191338:+ chr4:40348882:+ . NA TCGA-A8-A09N-01A-11R-A00Z-07 PRCP-DLG2 3 63 chr11:82900235:- chr11:83786792:- INFRAME NA TCGA-A8-A09N-01A-11R-A00Z-07 NELFA-POLN 5 43 chr4:2008750:- chr4:2208487:- INFRAME NA TCGA-A8-A09N-01A-11R-A00Z-07 HIST1H2AC-SLC17A4 2 30 chr6:26124749:+ chr6:25777926:+ . NA TCGA-A8-A09N-01A-11R-A00Z-07 PIK3C2B-LRRN2 1 16 chr1:204464012:- chr1:204620218:- . NA TCGA-A8-A09N-01A-11R-A00Z-07 ZC3H3-YY1 2 12 chr8:143475398:- chr14:100262304:+ INFRAME NA TCGA-A8-A09N-01A-11R-A00Z-07 PPP1R13B-PPP1R16A 3 4 chr14:103797371:- chr8:144490034:+ . NA TCGA-A8-A09N-01A-11R-A00Z-07 LARP7-ALPK1 3 2 chr4:112637603:+ chr4:112411827:+ . NA TCGA-A8-A09N-01A-11R-A00Z-07 FAM35A-BMPR1A 2 5 chr10:87152879:+ chr10:86890062:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 NVL-NEK2 35 67 chr1:224250212:- chr1:211674513:- INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 RAI1-IGF2BP1 20 87 chr17:17724159:+ chr17:48999109:+ . NA TCGA-A8-A09Q-01A-11R-A00Z-07 CDC5L-PITPNC1 14 81 chr6:44429910:+ chr17:67532802:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 RHOH-N4BP2 20 41 chr4:40197300:+ chr4:40097227:+ . NA TCGA-A8-A09Q-01A-11R-A00Z-07 WRB-NLK 12 34 chr21:39380486:+ chr17:28163543:+ FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 AGPAT3-KSR1 13 24 chr21:43904019:+ chr17:27588475:+ . NA TCGA-A8-A09Q-01A-11R-A00Z-07 RPS6KA6-HDX 12 20 chrX:84186061:- chrX:84333842:- INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 CHFR-OSBPL8 13 12 chr12:132887196:- chr12:76487618:- . NA TCGA-A8-A09Q-01A-11R-A00Z-07 NDUFS1-KRTAP6-2 9 16 chr2:206127797:- chr21:30598896:- . NA TCGA-A8-A09Q-01A-11R-A00Z-07 STAU2-MSI2 8 18 chr8:73738284:- chr17:57257098:+ FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 POLA1-MAP3K15 6 21 chrX:24888122:+ chrX:19409973:- INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 REV3L-SOBP 9 8 chr6:111405470:- chr6:107533459:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 RSBN1L-SHANK2 8 12 chr7:77750064:+ chr11:70473439:- FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 PEMT-B4GALNT2 4 26 chr17:17522280:- chr17:49141247:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 HNRNPM-CERS4 5 19 chr19:8445111:+ chr19:8251076:+ . NA TCGA-A8-A09Q-01A-11R-A00Z-07 IL6ST-DHX29 2 26 chr5:55947493:- chr5:55269637:- FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 PPP3CB-CAMK2G 6 4 chr10:73444725:- chr10:73860889:- INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 HEATR6-GALNT13 5 6 chr17:60078696:- chr2:154450411:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 EVA1C-CEP112 2 16 chr21:32467848:+ chr17:65927689:- FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 HEATR6-FGF10 4 6 chr17:60055515:- chr5:44310530:- FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 ARSG-CEP112 3 9 chr17:68307711:+ chr17:66096632:- FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 LARP4-PTPRM 4 4 chr12:50429090:+ chr18:8244058:+ FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 CREB1-FASTKD2 3 6 chr2:207570321:+ chr2:206786733:+ FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 CYTH3-MAD1L1 2 9 chr7:6171202:- chr7:1898390:- INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 NVL-GPKOW 3 5 chr1:224250212:- chrX:49123755:- . NA TCGA-A8-A09Q-01A-11R-A00Z-07 ITSN1-WRB 3 2 chr21:33642713:+ chr21:39391769:+ . NA TCGA-A8-A09Q-01A-11R-A00Z-07 HELLS-TBC1D12 2 5 chr10:94588390:+ chr10:94521955:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 C21orf59-CLDN14 1 7 chr21:32603161:- chr21:36461776:- . NA TCGA-A8-A09Q-01A-11R-A00Z-07 NT5M-ZNF652 2 2 chr17:17306643:+ chr17:49317983:- . NA TCGA-A8-A09Q-01A-11R-A00Z-07 TOP3A-HEATR6 1 6 chr17:18301885:- chr17:60073886:- INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 PEMT-IGF2BP1 1 4 chr17:17576920:- chr17:49041378:+ FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 RAB21-KSR1 1 4 chr12:71755288:+ chr17:27550568:+ INFRAME NA TCGA-A8-A09Q-01A-11R-A00Z-07 TTC21B-SCN3A 1 4 chr2:165911327:- chr2:165100424:- FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 PIKFYVE-BPTF 1 3 chr2:208271691:+ chr17:67928355:+ FRAMESHIFT NA TCGA-A8-A09Q-01A-11R-A00Z-07 FBXL7-FAM134B 1 2 chr5:15500713:+ chr5:16572102:- FRAMESHIFT NA TCGA-A8-A09R-01A-11R-A00Z-07 PEG10-COL1A2 11 38 chr7:94656580:+ chr7:94400196:+ . NA TCGA-A8-A09R-01A-11R-A00Z-07 DLGAP5-L2HGDH 5 5 chr14:55191463:- chr14:50247253:- . NA TCGA-A8-A09R-01A-11R-A00Z-07 FNTB-RAB15 2 9 chr14:64987097:+ chr14:64952571:- FRAMESHIFT NA TCGA-A8-A09T-01A-11R-A00Z-07 TSPAN9-PRR4 2 13 chr12:3083719:+ chr12:10848407:- . NA TCGA-A8-A09V-01A-11R-A034-07 DCLK1-SERPINE3 3 16 chr13:36111869:- chr13:51361278:+ FRAMESHIFT NA TCGA-A8-A09X-01A-11R-A00Z-07 SNX9-DAP 7 17 chr6:157902045:+ chr5:10683571:- INFRAME NA TCGA-A8-A09X-01A-11R-A00Z-07 DAP-SNX9 7 14 chr5:10748175:- chr6:157906128:+ INFRAME NA TCGA-A8-A09X-01A-11R-A00Z-07 SHROOM3-FABP5 5 10 chr4:76780646:+ chr8:81280536:+ . NA TCGA-A8-A09X-01A-11R-A00Z-07 RNF13-CLDN16 1 4 chr3:149921227:+ chr3:190370893:+ . NA TCGA-A8-A0A1-01A-11R-A00Z-07 PDE4B-JAK1 1 5 chr1:66332620:+ chr1:64886341:- . Likely Oncogenic NA TCGA-A8-A0A4-01A-11R-A00Z-07 RILPL1-SARNP 4 12 chr12:123484180:- chr12:55757553:- FRAMESHIFT NA TCGA-A8-A0A4-01A-11R-A00Z-07 ZNF451-NADSYN1 1 10 chr6:57128840:+ chr11:71463432:+ FRAMESHIFT NA TCGA-A8-A0A4-01A-11R-A00Z-07 TSKU-SFRP4 1 1 chr11:76783404:+ chr7:37926774:- . NA TCGA-A8-A0A6-01A-12R-A056-07 INTS4-POLD3 5 47 chr11:77978996:- chr11:74668777:+ FRAMESHIFT NA TCGA-A8-A0A6-01A-12R-A056-07 WDR3-MYEOV 6 32 chr1:117957196:+ chr11:69341510:+ . NA TCGA-A8-A0A6-01A-12R-A056-07 SLC22A15-ANO1 7 21 chr1:116037388:+ chr11:70149710:+ INFRAME NA TCGA-A8-A0A6-01A-12R-A056-07 PPFIA1-KDM2A 4 18 chr11:70362488:+ chr11:67257484:+ . NA TCGA-A8-A0A6-01A-12R-A056-07 MAN1A2-VANGL1 2 10 chr1:117442325:+ chr1:115682364:+ INFRAME NA TCGA-A8-A0A7-01A-11R-A00Z-07 LRRC59-NUP107 653 1151 chr17:50392398:- chr12:68741813:+ INFRAME NA TCGA-A8-A0A7-01A-11R-A00Z-07 RARA-CA10 24 165 chr17:40318448:+ chr17:52072393:- . NA TCGA-A8-A0A7-01A-11R-A00Z-07 CPSF6-OSBPL8 3 8 chr12:69239706:+ chr12:76487618:- . NA TCGA-A8-A0A7-01A-11R-A00Z-07 TBL1X-WWC3 1 5 chrX:9501849:+ chrX:10063445:+ . NA TCGA-A8-A0A7-01A-11R-A00Z-07 OSBPL8-GSDMA 1 3 chr12:76559397:- chr17:39965683:+ . NA TCGA-A8-A0A9-01A-11R-A00Z-07 PPM1H-SLC6A15 52 92 chr12:62737502:- chr12:84870670:- INFRAME NA TCGA-A8-A0A9-01A-11R-A00Z-07 SRGAP1-GAB2 15 110 chr12:64087026:+ chr11:78280901:- FRAMESHIFT NA TCGA-A8-A0A9-01A-11R-A00Z-07 RNF121-PPP6R3 18 39 chr11:71990717:+ chr11:68564303:+ FRAMESHIFT NA TCGA-A8-A0A9-01A-11R-A00Z-07 ARRB1-RASSF3 5 10 chr11:75281075:- chr12:64684787:+ FRAMESHIFT NA TCGA-A8-A0A9-01A-11R-A00Z-07 SNAP23-RGAG1 4 4 chr15:42495713:+ chrX:110445123:+ . NA TCGA-A8-A0A9-01A-11R-A00Z-07 DHCR7-USP15 1 1 chr11:71437812:- chr12:62383840:+ INFRAME NA TCGA-A8-A0AB-01A-11R-A034-07 RNF167-PIGL 10 34 chr17:4941157:+ chr17:16299888:+ FRAMESHIFT NA TCGA-A8-A0AD-01A-11R-A056-07 RNF144B-LYRM4 25 90 chr6:18399699:+ chr6:5109491:- INFRAME NA TCGA-A8-A0AD-01A-11R-A056-07 MAPT-MARCH10 36 26 chr17:45962470:+ chr17:62788599:- FRAMESHIFT NA TCGA-A8-A0AD-01A-11R-A056-07 ATXN1-PCTP 11 38 chr6:16485972:- chr17:55767335:+ . NA TCGA-A8-A0AD-01A-11R-A056-07 BTBD9-FARS2 8 21 chr6:38344984:- chr6:5545180:+ INFRAME NA TCGA-A8-A0AD-01A-11R-A056-07 KDM1B-PITPNC1 5 13 chr6:18171479:+ chr17:67578186:+ INFRAME NA TCGA-A8-A0AD-01A-11R-A056-07 C16orf45-POMT2 4 15 chr16:15434759:+ chr14:77306441:- FRAMESHIFT NA TCGA-A8-A0AD-01A-11R-A056-07 MED1-EYS 6 7 chr17:39451038:- chr6:65639892:- . NA TCGA-A8-A0AD-01A-11R-A056-07 CLK4-ZNF354A 1 8 chr5:178608376:- chr5:178697695:- . NA TCGA-A8-A0AD-01A-11R-A056-07 CDC42EP4-NEUROD2 1 5 chr17:73311893:- chr17:39606604:- . NA TCGA-AC-A23C-01A-12R-A169-07 CASC15-RIT2 266 771 chr6:22020542:+ chr18:42743720:- . NA TCGA-AC-A23C-01A-12R-A169-07 HCG25-TREM2 44 183 chr6:33251706:+ chr6:41159066:- . NA TCGA-AC-A23C-01A-12R-A169-07 RAB27B-PXDC1 18 45 chr18:54828700:+ chr6:3727662:- . NA TCGA-AC-A23C-01A-12R-A169-07 ARIH2-SLC25A20 6 36 chr3:48918998:+ chr3:48892072:- . NA TCGA-AC-A23C-01A-12R-A169-07 MED1-CAP2 4 25 chr17:39439165:- chr6:17539269:+ FRAMESHIFT NA TCGA-AC-A23C-01A-12R-A169-07 TMEM120B-MORN3 4 7 chr12:121712964:+ chr12:121659348:- FRAMESHIFT NA TCGA-AC-A23C-01A-12R-A169-07 CDK10-GAS8 3 7 chr16:89682496:+ chr16:90031299:+ INFRAME NA TCGA-AC-A23C-01A-12R-A169-07 ZNF346-NSD1 1 7 chr5:177044533:+ chr5:177204120:+ INFRAME Likely Oncogenic NA TCGA-AC-A23H-01A-11R-A157-07 KANSL1-ORMDL3 115 284 chr17:46067549:- chr17:39924225:- . NA TCGA-AC-A23H-01A-11R-A157-07 CKAP5-VMP1 62 114 chr11:46758923:- chr17:59764971:+ INFRAME NA TCGA-AC-A23H-01A-11R-A157-07 PTPA-NUP188 13 49 chr9:129129110:+ chr9:128968506:+ INFRAME NA TCGA-AC-A23H-01A-11R-A157-07 USP32-GPR137 5 27 chr17:60391882:- chr11:64286510:+ FRAMESHIFT NA TCGA-AC-A23H-01A-11R-A157-07 BTBD7-UBR7 4 26 chr14:93263785:- chr14:93222313:+ FRAMESHIFT NA TCGA-AC-A23H-01A-11R-A157-07 SSB-PTCHD3P2 2 24 chr2:169808902:+ chr2:169767302:- . NA TCGA-AC-A23H-01A-11R-A157-07 UBR7-BTBD7 3 13 chr14:93220411:+ chr14:93257355:- INFRAME NA TCGA-AC-A23H-01A-11R-A157-07 UBE2I-CACNA1H 2 6 chr16:1309773:+ chr16:1217919:+ . NA TCGA-AC-A23H-01A-11R-A157-07 SHANK2-PRKCA 2 5 chr11:71224697:- chr17:66496201:+ . NA TCGA-AC-A2B8-01A-11R-A17B-07 ADAMTS10-MLLT1 10 34 chr19:8600928:- chr19:6270759:- INFRAME NA TCGA-AC-A2BK-01A-11R-A21T-07 ABTB2-TYRL 20 166 chr11:34356701:- chr11:49415754:- . NA TCGA-AC-A2BK-01A-11R-A21T-07 LONP1-ZNF780B 19 74 chr19:5707060:- chr19:40036626:- INFRAME NA TCGA-AC-A2BK-01A-11R-A21T-07 CAPRIN1-CAT 10 27 chr11:34071987:+ chr11:34449192:+ INFRAME NA TCGA-AC-A2BK-01A-11R-A21T-07 MIRLET7BHG-COL4A1 6 23 chr22:46053920:+ chr13:110242734:- . NA TCGA-AC-A2BK-01A-11R-A21T-07 PPP2R2A-APP 2 5 chr8:26293740:+ chr21:26112146:- FRAMESHIFT NA TCGA-AC-A2BK-01A-11R-A21T-07 CAMSAP2-BCAR3 1 7 chr1:200815644:+ chr1:93706142:- . NA TCGA-AC-A2BK-01A-11R-A21T-07 DBNDD1-TPGS1 2 3 chr16:90008784:- chr19:518889:+ FRAMESHIFT NA TCGA-AC-A2BK-01A-11R-A21T-07 UBAP1-NFX1 1 7 chr9:34179240:+ chr9:33338510:+ INFRAME NA TCGA-AC-A2BK-01A-11R-A21T-07 ITGA9-CTDSPL 1 6 chr3:37481607:+ chr3:37947057:+ INFRAME NA TCGA-AC-A2BK-01A-11R-A21T-07 WIPF1-CHN1 1 4 chr2:174682774:- chr2:174846957:- . NA TCGA-AC-A2BK-01A-11R-A21T-07 THBS2-NME4 1 3 chr6:169246197:- chr16:398990:+ INFRAME NA TCGA-AC-A2BM-01A-11R-A21T-07 TARBP1-RBM34 13 74 chr1:234425673:- chr1:235148447:- INFRAME NA TCGA-AC-A2BM-01A-11R-A21T-07 NAGA-WBP2NL 15 17 chr22:42062827:- chr22:42030720:+ . NA TCGA-AC-A2BM-01A-11R-A21T-07 BAG4-ZMAT4 9 35 chr8:38177139:+ chr8:40825680:- . NA TCGA-AC-A2BM-01A-11R-A21T-07 IGHMBP2-PITPNM1 4 55 chr11:68904930:+ chr11:67492177:- . NA TCGA-AC-A2BM-01A-11R-A21T-07 MRPL21-MYO1B 4 54 chr11:68900535:- chr2:191400382:+ . NA TCGA-AC-A2BM-01A-11R-A21T-07 VAV2-TMEM8C 7 16 chr9:133939103:- chr9:133520288:- INFRAME NA TCGA-AC-A2BM-01A-11R-A21T-07 SHANK2-UNC5D 4 20 chr11:71075159:- chr8:35683547:+ INFRAME NA TCGA-AC-A2BM-01A-11R-A21T-07 INTS4-GAB2 2 21 chr11:77978996:- chr11:78280901:- INFRAME NA TCGA-AC-A2BM-01A-11R-A21T-07 HHAT-SERTAD4 3 10 chr1:210404679:+ chr1:210237944:+ . NA TCGA-AC-A2BM-01A-11R-A21T-07 ADAMTS13-LHX2 3 4 chr9:133449965:+ chr9:124032420:+ FRAMESHIFT NA TCGA-AC-A2BM-01A-11R-A21T-07 HBP1-PIK3CG 1 4 chr7:107186472:+ chr7:106905109:+ FRAMESHIFT NA TCGA-AC-A2BM-01A-11R-A21T-07 MAP3K2-SHANK2 1 4 chr2:127387452:- chr11:71119032:- . NA TCGA-AC-A2FB-01A-11R-A17B-07 PIP4K2B-SHANK2 53 126 chr17:38777687:- chr11:70896567:- INFRAME NA TCGA-AC-A2FB-01A-11R-A17B-07 KANSL1-LAYN 53 87 chr17:46050533:- chr11:111543923:+ INFRAME NA TCGA-AC-A2FB-01A-11R-A17B-07 RARA-CDK12 5 50 chr17:40318448:+ chr17:39544249:+ . Likely Oncogenic NA TCGA-AC-A2FB-01A-11R-A17B-07 SSH2-ANO1 6 35 chr17:29929938:- chr11:70111707:+ FRAMESHIFT NA TCGA-AC-A2FB-01A-11R-A17B-07 DBF4B-DYNC2H1 6 6 chr17:44709366:+ chr11:103165898:+ FRAMESHIFT NA TCGA-AC-A2FB-01A-11R-A17B-07 PIP4K2B-SLC6A4 3 11 chr17:38786823:- chr17:30222915:- . NA TCGA-AC-A2FB-01A-11R-A17B-07 THRA-GOSR1 2 6 chr17:40076938:+ chr17:30490126:+ FRAMESHIFT NA TCGA-AC-A2FB-01A-11R-A17B-07 PGAP3-BPTF 2 5 chr17:39685922:- chr17:67982252:+ FRAMESHIFT NA TCGA-AC-A2FB-01A-11R-A17B-07 PGAP3-IFI35 1 7 chr17:39684597:- chr17:43012179:+ INFRAME NA TCGA-AC-A2FF-01A-11R-A17B-07 NFE2L1-ENG 10 30 chr17:48057502:+ chr9:127820037:- INFRAME NA TCGA-AC-A2FF-01A-11R-A17B-07 KANSL1-OSBPL7 2 27 chr17:46223671:- chr17:47813403:- FRAMESHIFT NA TCGA-AC-A2FF-01A-11R-A17B-07 FBXL20-LRSAM1 2 21 chr17:39402173:- chr9:127495964:+ INFRAME NA TCGA-AC-A2FF-01A-11R-A17B-07 PBX3-NSF 1 17 chr9:125748623:+ chr17:46674414:+ INFRAME NA TCGA-AC-A2FF-01A-11R-A17B-07 TMCC1-ALDH1L1 1 6 chr3:129827803:- chr3:126161002:- FRAMESHIFT NA TCGA-AC-A2FO-01A-11R-A180-07 FBXO42-RUNX1 12 12 chr1:16352255:- chr21:34799462:- . Likely Oncogenic NA TCGA-AC-A2FO-01A-11R-A180-07 PLEKHM2-ZSWIM5 6 14 chr1:15684618:+ chr1:45088237:- FRAMESHIFT NA TCGA-AC-A2FO-01A-11R-A180-07 TTC19-TOM1L2 3 7 chr17:16026702:+ chr17:17893810:- FRAMESHIFT NA TCGA-AC-A2FO-01A-11R-A180-07 UBE2G1-SLC25A11 1 12 chr17:4366271:- chr17:4939212:- FRAMESHIFT NA TCGA-AC-A2QH-01A-11R-A18M-07 SREBF1-DRC3 5 12 chr17:17836727:- chr17:17973852:+ . NA TCGA-AC-A2QH-01A-11R-A18M-07 COG5-FOXP2 5 4 chr7:107527237:- chr7:114689782:+ FRAMESHIFT NA TCGA-AC-A3OD-01A-11R-A21T-07 TIAM1-FBLIM1 25 78 chr21:31339243:- chr1:15784548:+ . NA TCGA-AC-A3OD-01A-11R-A21T-07 NEU3-NDUFV1 9 133 chr11:74989154:+ chr11:67608400:+ INFRAME NA TCGA-AC-A3OD-01A-11R-A21T-07 THOC7-LRIG1 20 8 chr3:63863772:- chr3:66462509:- FRAMESHIFT NA TCGA-AC-A3OD-01A-11R-A21T-07 CHKA-XRRA1 3 8 chr11:68120828:- chr11:74930372:- FRAMESHIFT NA TCGA-AC-A3QQ-01A-11R-A22K-07 TNFAIP1-AATF 4 9 chr17:28335856:+ chr17:36986617:+ . NA TCGA-AC-A3W5-01A-11R-A22K-07 ASB17-IGKJ1 9 0 chr1:75922186:- chr2:88861915:- INFRAME NA TCGA-AC-A3W5-01A-11R-A22K-07 POLR3F-DTD1 1 8 chr20:18473458:+ chr20:18744100:+ FRAMESHIFT NA TCGA-AC-A3W5-01A-11R-A22K-07 MYO1D-TMIGD1 1 4 chr17:32876778:- chr17:30329529:- FRAMESHIFT NA TCGA-AC-A3YI-01A-21R-A239-07 RNF185-ISX 3 23 chr22:31160303:+ chr22:35082518:+ . NA TCGA-AC-A4ZE-01A-11R-A41B-07 MACROD1-PITPNM1 54 231 chr11:64151239:- chr11:67502086:- INFRAME NA TCGA-AC-A4ZE-01A-11R-A41B-07 ALDH3B2-TENM4 15 40 chr11:67674436:- chr11:78722917:- . NA TCGA-AC-A4ZE-01A-11R-A41B-07 UVRAG-OTUB1 15 31 chr11:75912039:+ chr11:63996530:+ INFRAME NA TCGA-AC-A4ZE-01A-11R-A41B-07 SHANK2-SPTBN2 8 40 chr11:70668439:- chr11:66688209:- . NA TCGA-AC-A4ZE-01A-11R-A41B-07 SHANK2-RBM4B 1 10 chr11:70698688:- chr11:66665578:- FRAMESHIFT NA TCGA-AC-A4ZE-01A-11R-A41B-07 AIP-POLD4 1 3 chr11:67490457:+ chr11:67353077:- INFRAME NA TCGA-AC-A5EH-01A-11R-A28M-07 AP1M1-RAB8A 8 18 chr19:16209177:+ chr19:16125470:+ INFRAME NA TCGA-AC-A5EH-01A-11R-A28M-07 WASH3P-ACSF2 2 18 chr15:101966223:+ chr17:50460677:+ . NA TCGA-AC-A5EH-01A-11R-A28M-07 EEA1-TMCC3 2 10 chr12:92891629:- chr12:94582538:- INFRAME NA TCGA-AC-A5XS-01A-11R-A29R-07 PSMA5-EIF2S2P5 3 21 chr1:109401346:- chr1:114468973:+ . NA TCGA-AC-A5XS-01A-11R-A29R-07 POLR1C-MDGA1 3 11 chr6:43519838:+ chr6:37664106:- INFRAME NA TCGA-AC-A5XU-01A-11R-A28M-07 ZNF461-MATN2 27 166 chr19:36664698:- chr8:97888075:+ . NA TCGA-AC-A5XU-01A-11R-A28M-07 SUZ12P1-BLVRB 21 97 chr17:30709811:+ chr19:40458545:- . NA TCGA-AC-A5XU-01A-11R-A28M-07 TRPS1-C19orf66 24 81 chr8:115587001:- chr19:10089657:+ INFRAME NA TCGA-AC-A5XU-01A-11R-A28M-07 TAF2-ALDH16A1 8 69 chr8:119831677:- chr19:49463854:+ INFRAME NA TCGA-AC-A5XU-01A-11R-A28M-07 ZNF584-LAIR1 6 48 chr19:58401662:+ chr19:54364330:- . NA TCGA-AC-A5XU-01A-11R-A28M-07 HPN-KB-1042C11.5 6 31 chr19:35049516:+ chr8:102683580:+ . NA TCGA-AC-A5XU-01A-11R-A28M-07 TBC1D16-ZNF573 5 13 chr17:79951450:- chr19:37817220:- . NA TCGA-AC-A5XU-01A-11R-A28M-07 GATAD2A-PRKACA 2 20 chr19:19386138:+ chr19:14093792:- . NA TCGA-AC-A5XU-01A-11R-A28M-07 ZNF415-EIF3H 2 20 chr19:53115704:- chr8:116658980:- INFRAME NA TCGA-AC-A5XU-01A-11R-A28M-07 CERS4-SPAG17 1 22 chr19:8210862:+ chr1:118008198:- . NA TCGA-AC-A5XU-01A-11R-A28M-07 BPTF-ARSG 3 9 chr17:67948306:+ chr17:68343604:+ FRAMESHIFT NA TCGA-AC-A5XU-01A-11R-A28M-07 ARSG-PRKCA 3 5 chr17:68356804:+ chr17:66496201:+ FRAMESHIFT NA TCGA-AC-A5XU-01A-11R-A28M-07 CDC42EP5-CYTH1 2 6 chr19:54471545:- chr17:78709732:- . NA TCGA-AC-A5XU-01A-11R-A28M-07 PRKCA-CDH8 2 4 chr17:66689047:+ chr16:61901473:- INFRAME NA TCGA-AC-A5XU-01A-11R-A28M-07 TRPS1-LRP12 1 7 chr8:115587001:- chr8:104509074:- FRAMESHIFT NA TCGA-AC-A62Y-01A-11R-A29R-07 DOLPP1-SPTAN1 4 26 chr9:129086798:+ chr9:128617640:+ INFRAME NA TCGA-AC-A6IV-01A-12R-A33J-07 RNF40-PLK1 11 17 chr16:30772190:+ chr16:23687469:+ FRAMESHIFT NA TCGA-AC-A6IV-01A-12R-A33J-07 PRKCA-IGF2BP1 1 4 chr17:66306127:+ chr17:49049352:+ FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 DDAH1-ZNHIT6 13 27 chr1:85464743:- chr1:85654098:- FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 RAP1GAP-NIT2 7 28 chr1:21609575:- chr3:100354772:+ FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 LRP8-TMEM217 10 10 chr1:53250690:- chr6:37219041:- . NA TCGA-AC-A6IW-01A-12R-A33J-07 RAB2A-TRAPPC9 3 22 chr8:60517253:+ chr8:140024079:- FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 AGO2-PCMTD1 6 8 chr8:140585119:- chr8:51833689:- INFRAME NA TCGA-AC-A6IW-01A-12R-A33J-07 UBE3C-DNAJB6 5 11 chr7:157139338:+ chr7:157382246:+ FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 SIAH2-CFAP97 5 7 chr3:150762433:- chr4:185164179:- INFRAME NA TCGA-AC-A6IW-01A-12R-A33J-07 GALNT10-IQCA1 2 14 chr5:154298079:+ chr2:236380636:- FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 DAD1-RAB2B 4 5 chr14:22588947:- chr14:21468752:- FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 ZC3H15-FAM171B 2 8 chr2:186486457:+ chr2:186740228:+ FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 ALPL-FILIP1L 2 7 chr1:21509517:+ chr3:99830605:- . NA TCGA-AC-A6IW-01A-12R-A33J-07 GNB1-NADK 2 6 chr1:1890820:- chr1:1757310:- . NA TCGA-AC-A6IW-01A-12R-A33J-07 BRWD1-ABCA10 2 3 chr21:39247701:- chr17:69187879:- FRAMESHIFT NA TCGA-AC-A6IW-01A-12R-A33J-07 TRPS1-PAFAH1B1 1 3 chr8:115668545:- chr17:2638099:+ . NA TCGA-AC-A6IX-01A-12R-A32P-07 NDUFB9-TDRKH 112 354 chr8:124539287:+ chr1:151783049:- . NA TCGA-AC-A6IX-01A-12R-A32P-07 LRP12-LAPTM4B 17 52 chr8:104588819:- chr8:97851397:+ FRAMESHIFT NA TCGA-AC-A6IX-01A-12R-A32P-07 TOP3A-TEKT1 3 15 chr17:18314599:- chr17:6815962:- FRAMESHIFT NA TCGA-AC-A6IX-01A-12R-A32P-07 OXR1-CSMD3 1 15 chr8:106713985:+ chr8:113314793:- FRAMESHIFT NA TCGA-AC-A6IX-01A-12R-A32P-07 CYP4Z2P-SPATA6 1 14 chr1:46898843:- chr1:48453131:- . NA TCGA-AC-A6IX-01A-12R-A32P-07 ZHX2-COL14A1 2 6 chr8:122781946:+ chr8:120168161:+ . NA TCGA-AC-A6IX-01A-12R-A32P-07 ZFPM2-COL14A1 1 5 chr8:105318981:+ chr8:120168161:+ INFRAME NA TCGA-AC-A7VB-01A-11R-A352-07 SLC6A6-FGD5 15 16 chr3:14416453:+ chr3:14864128:+ INFRAME NA TCGA-AC-A7VB-01A-11R-A352-07 ELL-INSR 4 34 chr19:18521921:- chr19:7267896:- FRAMESHIFT NA TCGA-AC-A7VB-01A-11R-A352-07 ZFC3H1-SHISA9 2 5 chr12:71642436:- chr16:13203394:+ INFRAME NA TCGA-AC-A7VB-01A-11R-A352-07 ZNF257-TRHDE 2 5 chr19:22052635:+ chr12:72469758:+ FRAMESHIFT NA TCGA-AC-A7VB-01A-11R-A352-07 LSM4-TRHDE 1 3 chr19:18323018:- chr12:72377995:+ INFRAME NA TCGA-AC-A8OP-01A-11R-A36F-07 SGTA-INSL3 16 110 chr19:2762506:- chr19:17817059:- INFRAME NA TCGA-AC-A8OP-01A-11R-A36F-07 SEC14L1-TEX2 4 20 chr17:77143659:+ chr17:64177471:- INFRAME NA TCGA-AC-A8OP-01A-11R-A36F-07 MAP2K3-NOS2P2 1 12 chr17:21305128:+ chr17:18497674:- . NA TCGA-AC-A8OP-01A-11R-A36F-07 LLGL2-TANC2 2 6 chr17:75563463:+ chr17:63237814:+ INFRAME NA TCGA-AC-A8OP-01A-11R-A36F-07 TTLL12-SCUBE1 1 4 chr22:43176320:- chr22:43238954:- FRAMESHIFT NA TCGA-AC-A8OQ-01A-11R-A41B-07 DNASE2-TRMT1 16 87 chr19:12878382:- chr19:13105396:- FRAMESHIFT NA TCGA-AC-A8OQ-01A-11R-A41B-07 RAI1-SPNS2 6 26 chr17:17803849:+ chr17:4525057:+ INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 DGUOK-C2orf78 6 15 chr2:73927052:+ chr2:73813477:+ INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 ABHD2-ACAN 5 3 chr15:89155534:+ chr15:88854852:+ INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 MROH1-ZNF707 4 4 chr8:144148076:+ chr8:143709253:+ . NA TCGA-AC-A8OQ-01A-11R-A41B-07 UBTD2-FBXW11 3 8 chr5:172283596:- chr5:171914405:- FRAMESHIFT NA TCGA-AC-A8OQ-01A-11R-A41B-07 GMEB2-STMN3 3 5 chr20:63592022:- chr20:63644309:- INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 PTPRZ1-UBE2H 3 5 chr7:122028643:+ chr7:129839335:- INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 SHPK-ATP2A3 1 9 chr17:3624048:- chr17:3953710:- FRAMESHIFT NA TCGA-AC-A8OQ-01A-11R-A41B-07 TMF1-FRMD4B 1 9 chr3:69028226:- chr3:69313517:- INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 ACSL3-MOGAT1 2 4 chr2:222861258:+ chr2:222688344:+ . NA TCGA-AC-A8OQ-01A-11R-A41B-07 MAPK1-YDJC 1 6 chr22:21867322:- chr22:21629407:- INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 SNX27-SCNM1 2 2 chr1:151639119:+ chr1:151168986:+ FRAMESHIFT NA TCGA-AC-A8OQ-01A-11R-A41B-07 BPTF-NOL11 1 3 chr17:67932019:+ chr17:67739516:+ FRAMESHIFT NA TCGA-AC-A8OQ-01A-11R-A41B-07 EFR3B-NCOA1 1 2 chr2:25145051:+ chr2:24739432:+ INFRAME NA TCGA-AC-A8OQ-01A-11R-A41B-07 ASXL1-XKR7 1 1 chr20:32369123:+ chr20:31995068:+ FRAMESHIFT Likely Oncogenic NA TCGA-AC-A8OR-01A-21R-A41B-07 CCNL2-ANKRD65 2 11 chr1:1398233:- chr1:1419549:- INFRAME NA TCGA-AN-A03Y-01A-21R-A00Z-07 PAK1-KCTD14 13 139 chr11:77379241:- chr11:78017270:- FRAMESHIFT NA TCGA-AN-A03Y-01A-21R-A00Z-07 GPAT4-FNTA 5 78 chr8:41615048:+ chr8:43085160:+ INFRAME NA TCGA-AN-A03Y-01A-21R-A00Z-07 RPS6KB2-PAAF1 8 45 chr11:67429240:+ chr11:73916545:+ INFRAME NA TCGA-AN-A03Y-01A-21R-A00Z-07 ARAP1-MOGAT2 1 31 chr11:72699005:- chr11:75719992:+ FRAMESHIFT NA TCGA-AN-A03Y-01A-21R-A00Z-07 EMSY-MYO7A 3 17 chr11:76539640:+ chr11:77147798:+ FRAMESHIFT NA TCGA-AN-A03Y-01A-21R-A00Z-07 CLNS1A-GAB2 2 12 chr11:77619606:- chr11:78227051:- . NA TCGA-AN-A041-01A-11R-A034-07 ZC3H7B-PRPF31 25 12 chr22:41301772:+ chr19:54115684:+ . NA TCGA-AN-A041-01A-11R-A034-07 RARA-PSME3 8 34 chr17:40356646:+ chr17:42837649:+ . NA TCGA-AN-A041-01A-11R-A034-07 RNF139-ASPH 4 10 chr8:124475290:+ chr8:61653660:- INFRAME NA TCGA-AN-A041-01A-11R-A034-07 P4HB-CPB1 1 19 chr17:81859300:- chr3:148841823:+ FRAMESHIFT NA TCGA-AN-A041-01A-11R-A034-07 ATP1A2-CPB1 1000 1000 chr1:160142764:+ chr3:148844488:+ . NA TCGA-AN-A046-01A-21R-A034-07 PDXDC1-LMF1 24 43 chr16:15008847:+ chr16:893072:- INFRAME NA TCGA-AN-A049-01A-21R-A00Z-07 MECR-NAALADL2 1 12 chr1:29230731:- chr3:175755220:+ FRAMESHIFT NA TCGA-AN-A049-01A-21R-A00Z-07 USP8-GOLGA8CP 2 5 chr15:50496084:+ chr15:20566104:+ . NA TCGA-AN-A049-01A-21R-A00Z-07 TADA2A-NLK 1 7 chr17:37427009:+ chr17:28122603:+ FRAMESHIFT NA TCGA-AN-A049-01A-21R-A00Z-07 PRPF40B-SPATS2 1 3 chr12:49623593:+ chr12:49460770:+ . NA TCGA-AN-A04A-01A-21R-A034-07 DST-KIAA0319L 4 34 chr6:56692388:- chr1:35435081:- FRAMESHIFT NA TCGA-AN-A04A-01A-21R-A034-07 NAPG-GREB1L 2 31 chr18:10530837:+ chr18:21473031:+ INFRAME NA TCGA-AN-A04A-01A-21R-A034-07 TPX2-DEFB123 1 6 chr20:31742647:+ chr20:31450029:+ . NA TCGA-AN-A04A-01A-21R-A034-07 SH3GL1-MUM1 1 2 chr19:4400324:- chr19:1357009:+ INFRAME NA TCGA-AN-A04C-01A-21R-A034-07 PALLD-NAA15 38 134 chr4:168668368:+ chr4:139370211:+ INFRAME NA TCGA-AN-A04C-01A-21R-A034-07 CLCN3-SMAD1 26 72 chr4:169636088:+ chr4:145553784:+ INFRAME NA TCGA-AN-A04C-01A-21R-A034-07 ATG5-QRSL1 9 82 chr6:106279661:- chr6:106665782:+ INFRAME NA TCGA-AN-A04C-01A-21R-A034-07 FAM160A1-IL15 15 56 chr4:151588926:+ chr4:141732738:+ INFRAME NA TCGA-AN-A04C-01A-21R-A034-07 PCTP-CALCOCO2 9 25 chr17:55751244:+ chr17:48860314:+ INFRAME NA TCGA-AN-A04C-01A-21R-A034-07 UBE2Z-ZNF652 6 12 chr17:48921272:+ chr17:49317983:- . NA TCGA-AN-A04C-01A-21R-A034-07 ATP5G1-SKAP1 1 20 chr17:48893456:+ chr17:48363814:- FRAMESHIFT NA TCGA-AN-A04C-01A-21R-A034-07 COX6B1-SERTAD1 3 12 chr19:35651349:+ chr19:40423546:- FRAMESHIFT NA TCGA-AN-A04D-01A-21R-A034-07 ANKRD46-TMEM222 33 57 chr8:100559711:- chr1:27330720:+ . NA TCGA-AN-A04D-01A-21R-A034-07 N4BP2L2-ZAR1L 9 40 chr13:32527408:- chr13:32304022:- FRAMESHIFT NA TCGA-AN-A04D-01A-21R-A034-07 EEF1DP3-CLDN10 10 16 chr13:31846939:+ chr13:95560132:+ . NA TCGA-AN-A0AJ-01A-11R-A00Z-07 PPIF-REEP3 203 298 chr10:79347743:+ chr10:63594778:+ INFRAME NA TCGA-AN-A0AJ-01A-11R-A00Z-07 LACE1-ZUFSP 67 177 chr6:108324048:+ chr6:116635879:- INFRAME NA TCGA-AN-A0AJ-01A-11R-A00Z-07 GRHL2-FAM213A 79 92 chr8:101492789:+ chr10:80431986:+ FRAMESHIFT NA TCGA-AN-A0AJ-01A-11R-A00Z-07 CD151-MIPEP 28 13 chr11:833026:+ chr13:23760217:- . NA TCGA-AN-A0AJ-01A-11R-A00Z-07 ZDHHC5-LCT 11 72 chr11:57673194:+ chr2:135798138:- FRAMESHIFT NA TCGA-AN-A0AJ-01A-11R-A00Z-07 ADK-KCNMA1 10 15 chr10:74314745:+ chr10:77251256:- INFRAME NA TCGA-AN-A0AJ-01A-11R-A00Z-07 RRP12-CRTAC1 6 22 chr10:97373046:- chr10:98011337:- INFRAME NA TCGA-AN-A0AJ-01A-11R-A00Z-07 XYLT2-ACSF2 3 11 chr17:50358540:+ chr17:50460677:+ FRAMESHIFT NA TCGA-AN-A0AJ-01A-11R-A00Z-07 GRHL2-TSPAN14 2 13 chr8:101492789:+ chr10:80489217:+ . NA TCGA-AN-A0AJ-01A-11R-A00Z-07 KARS-WDR59 2 13 chr16:75647578:- chr16:74965822:- FRAMESHIFT NA TCGA-AN-A0AJ-01A-11R-A00Z-07 STK39-MAT1A 3 8 chr2:168074982:- chr10:80285589:- FRAMESHIFT NA TCGA-AN-A0AJ-01A-11R-A00Z-07 BCAS3-ANLN 1 11 chr17:60747279:+ chr7:36449665:+ FRAMESHIFT NA TCGA-AN-A0AJ-01A-11R-A00Z-07 POLR3A-TP53BP2 1 11 chr10:78013650:- chr1:223821367:- INFRAME NA TCGA-AN-A0AJ-01A-11R-A00Z-07 ARHGEF7-SFTPA1 1 3 chr13:111217880:+ chr10:79611803:+ INFRAME NA TCGA-AN-A0AL-01A-11R-A00Z-07 BAG6-LY6G5C 179 644 chr6:31648677:- chr6:31677120:- FRAMESHIFT NA TCGA-AN-A0AL-01A-11R-A00Z-07 TRMU-TTC38 12 111 chr22:46343368:+ chr22:46292203:+ FRAMESHIFT NA TCGA-AN-A0AL-01A-11R-A00Z-07 SNRPA1-PCSK6 5 34 chr15:101291962:- chr15:101307325:- FRAMESHIFT NA TCGA-AN-A0AL-01A-11R-A00Z-07 TTLL7-MCOLN2 6 14 chr1:83904079:- chr1:84938082:- INFRAME NA TCGA-AN-A0AL-01A-11R-A00Z-07 MLLT10-NAV1 3 25 chr10:21617207:+ chr1:201821627:+ . NA TCGA-AN-A0AL-01A-11R-A00Z-07 GPR107-VPS13A 4 6 chr9:130092381:+ chr9:77332010:+ FRAMESHIFT NA TCGA-AN-A0AL-01A-11R-A00Z-07 NLGN4X-ACTN4 1 16 chrX:6228541:- chr19:38700600:+ . NA TCGA-AN-A0AL-01A-11R-A00Z-07 PIP5K1B-PGM5 1 12 chr9:68940790:+ chr9:68465093:+ INFRAME NA TCGA-AN-A0AL-01A-11R-A00Z-07 TRMT11-ICK 2 6 chr6:125986622:+ chr6:53019359:- FRAMESHIFT NA TCGA-AN-A0AL-01A-11R-A00Z-07 PDHX-CAT 2 4 chr11:34960518:+ chr11:34470958:+ FRAMESHIFT NA TCGA-AN-A0AL-01A-11R-A00Z-07 C3orf67-GPR34 1 7 chr3:59039557:- chrX:41695555:+ . NA TCGA-AN-A0AM-01A-11R-A034-07 TRIO-MARCH11 76 242 chr5:14488260:+ chr5:16091081:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 CPNE1-LPO 97 119 chr20:35664760:- chr17:58267349:+ . NA TCGA-AN-A0AM-01A-11R-A034-07 RBM12-LPO 97 119 chr20:35664760:- chr17:58267349:+ . NA TCGA-AN-A0AM-01A-11R-A034-07 IL12RB2-DAB1 32 179 chr1:67380123:+ chr1:57145429:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 MCM6-DARS 42 111 chr2:135865013:- chr2:135907407:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 WNK1-PIP4K2C 30 143 chr12:857249:+ chr12:57601526:+ FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 LEMD3-LYZ 31 107 chr12:65171118:+ chr12:69350108:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 FAM96A-SNX1 23 43 chr15:64088687:- chr15:64112573:+ FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 ST6GALNAC2-JMJD6 16 70 chr17:76578756:- chr17:76720498:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 SNX1-FAM96A 20 49 chr15:64096172:+ chr15:64081151:- FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 B4GALT5-PTGIS 22 30 chr20:49713576:- chr20:49550189:- FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 RHBDF2-JMJD6 9 60 chr17:76487712:- chr17:76718860:- . NA TCGA-AN-A0AM-01A-11R-A034-07 CAND1-TUSC5 17 27 chr12:67282053:+ chr17:1295491:+ FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 PHF20-DLGAP4 12 35 chr20:35914197:+ chr20:36442727:+ FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 SCML2-MAP7D2 13 29 chrX:18304972:- chrX:20064805:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 B3GNTL1-PPP1R27 13 11 chr17:83051737:- chr17:81834833:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 MBTPS2-EDEM2 7 13 chrX:21878692:+ chr20:35126375:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 ANKRD52-PGS1 3 26 chr12:56252015:- chr17:78414952:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 MID1-PIR 4 22 chrX:10833554:- chrX:15491309:- . NA TCGA-AN-A0AM-01A-11R-A034-07 PPCDC-SCAMP2 4 21 chr15:75028453:+ chr15:74854649:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 SEPT9-SMG6 7 5 chr17:77482335:+ chr17:2188515:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 RAB21-MDM1 2 23 chr12:71770699:+ chr12:68302872:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 RPAIN-LRRC27 3 19 chr17:5421466:+ chr10:132361457:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 SCAND2P-SEC11A 4 15 chr15:84632298:+ chr15:84670069:- . NA TCGA-AN-A0AM-01A-11R-A034-07 TBCD-NFIX 2 22 chr17:82941483:+ chr19:13025021:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 FRS2-NRG3 2 13 chr12:69532056:+ chr10:82865411:+ . NA TCGA-AN-A0AM-01A-11R-A034-07 POLA1-TIMELESS 4 3 chrX:24717758:+ chr12:56434231:- . NA TCGA-AN-A0AM-01A-11R-A034-07 ARFGEF3-TNNI3K 2 10 chr6:138162171:+ chr1:74436474:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 B4GALNT3-SLCO4A1 3 6 chr12:556866:+ chr20:62658677:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 NMT2-ITGA8 2 9 chr10:15128350:- chr10:15597299:- INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 SLC16A10-PEX3 1 13 chr6:111088095:+ chr6:143470961:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 DPM1-SNHG11 3 2 chr20:50955186:- chr20:38447466:+ . NA TCGA-AN-A0AM-01A-11R-A034-07 STK4-CPM 1 10 chr20:45001353:+ chr12:68842329:- FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 UTRN-SGK1 1 10 chr6:144678578:+ chr6:134207431:- FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 SCP2-FAF1 2 4 chr1:52961629:+ chr1:50705891:- FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 USP15-PKP4 1 7 chr12:62389988:+ chr2:158640627:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 CPSF6-MYRFL 2 1 chr12:69239706:+ chr12:69855280:+ FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 TRAPPC2-RBM39 1 5 chrX:13734525:- chr20:35721877:- . NA TCGA-AN-A0AM-01A-11R-A034-07 ASCC3-GRIK2 1 4 chr6:100766565:- chr6:101799648:+ INFRAME NA TCGA-AN-A0AM-01A-11R-A034-07 MDM1-LGR5 1 2 chr12:68296923:- chr12:71504614:+ FRAMESHIFT NA TCGA-AN-A0AM-01A-11R-A034-07 MDM2-XPOT 1000 1000 chr12:68828930:+ chr12:64439243:+ . NA TCGA-AN-A0AR-01A-11R-A00Z-07 BRD4-NOTCH3 91 81 chr19:15332290:- chr19:15170825:- . Oncogenic NA TCGA-AN-A0AR-01A-11R-A00Z-07 OLFM2-TBC1D21 8 130 chr19:9936304:- chr15:73881644:+ INFRAME NA TCGA-AN-A0AR-01A-11R-A00Z-07 SLC39A11-ATPAF2 10 23 chr17:72947752:- chr17:17977976:- . NA TCGA-AN-A0AR-01A-11R-A00Z-07 TFAP2A-MAK 7 19 chr6:10404508:- chr6:10764606:- INFRAME NA TCGA-AN-A0AR-01A-11R-A00Z-07 ZNF79-SLC2A8 3 20 chr9:127428917:+ chr9:127403117:+ . NA TCGA-AN-A0AR-01A-11R-A00Z-07 USP6NL-CCDC3 3 18 chr10:11489102:- chr10:13074100:- . NA TCGA-AN-A0AR-01A-11R-A00Z-07 NOTCH2NL-RAD51B 5 8 chr1:146189300:- chr14:68729808:+ . NA TCGA-AN-A0AR-01A-11R-A00Z-07 ESCO1-KANK1 3 15 chr18:21600623:- chr9:710804:+ . NA TCGA-AN-A0AR-01A-11R-A00Z-07 ARHGAP26-MEIKIN 1 13 chr5:142770915:+ chr5:131818863:- FRAMESHIFT NA TCGA-AN-A0AR-01A-11R-A00Z-07 SESTD1-ZNF385B 3 2 chr2:179264499:- chr2:179544969:- . NA TCGA-AN-A0AR-01A-11R-A00Z-07 XYLB-ITGA9 3 2 chr3:38348632:+ chr3:37653714:+ FRAMESHIFT NA TCGA-AN-A0AR-01A-11R-A00Z-07 INPP5F-FAM45A 2 1 chr10:119751156:+ chr10:119107948:+ . NA TCGA-AN-A0AS-01A-11R-A00Z-07 DCAF5-RAB5B 5 19 chr14:69152765:- chr12:55986869:+ INFRAME NA TCGA-AN-A0AS-01A-11R-A00Z-07 ANXA7-LGALS12 6 13 chr10:73396519:- chr11:63508553:+ INFRAME NA TCGA-AN-A0AS-01A-11R-A00Z-07 TSC22D1-DNAJC5B 5 10 chr13:44573163:- chr8:66076660:+ INFRAME NA TCGA-AN-A0AS-01A-11R-A00Z-07 SLC39A9-USP15 6 4 chr14:69424202:+ chr12:62389431:+ FRAMESHIFT NA TCGA-AN-A0AS-01A-11R-A00Z-07 IMPAD1-ZCCHC24 4 8 chr8:56993199:- chr10:79394440:- INFRAME NA TCGA-AN-A0AS-01A-11R-A00Z-07 PPME1-NARS2 2 16 chr11:74204445:+ chr11:78528936:- INFRAME NA TCGA-AN-A0AS-01A-11R-A00Z-07 LGALS12-PLAC9 2 5 chr11:63510501:+ chr10:80142082:+ FRAMESHIFT NA TCGA-AN-A0AS-01A-11R-A00Z-07 DCAF5-DPY19L2 2 2 chr14:69152765:- chr12:63661481:- FRAMESHIFT NA TCGA-AN-A0AS-01A-11R-A00Z-07 C16orf70-CMTM4 1 1 chr16:67110239:+ chr16:66636581:- FRAMESHIFT NA TCGA-AN-A0AT-01A-11R-A034-07 CD302-ALPL 12 29 chr2:159777938:- chr1:21553978:+ . NA TCGA-AN-A0AT-01A-11R-A034-07 MCM5-HMOX1 10 35 chr22:35408563:+ chr22:35389864:+ FRAMESHIFT NA TCGA-AN-A0AT-01A-11R-A034-07 MPDZ-NFIB 9 13 chr9:13279564:- chr9:14150265:- . NA TCGA-AN-A0AT-01A-11R-A034-07 YIPF4-COMMD1 5 24 chr2:32307190:+ chr2:62135831:+ . NA TCGA-AN-A0AT-01A-11R-A034-07 TRUB1-FAM160B1 3 22 chr10:114959807:+ chr10:114899494:+ FRAMESHIFT NA TCGA-AN-A0AT-01A-11R-A034-07 TM4SF18-WWTR1 1 4 chr3:149324880:- chr3:149542537:- FRAMESHIFT NA TCGA-AN-A0AT-01A-11R-A034-07 PPP1R12B-CAMSAP2 1 3 chr1:202449171:+ chr1:200852541:+ FRAMESHIFT NA TCGA-AN-A0FD-01A-11R-A034-07 RPS6KB1-EFCAB3 16 35 chr17:59893325:+ chr17:62382963:+ FRAMESHIFT NA TCGA-AN-A0FD-01A-11R-A034-07 CLTC-FAM129C 8 47 chr17:59620173:+ chr19:17537376:+ FRAMESHIFT NA TCGA-AN-A0FD-01A-11R-A034-07 MSI2-RAD51C 4 13 chr17:57262192:+ chr17:58694931:+ FRAMESHIFT Likely Oncogenic NA TCGA-AN-A0FD-01A-11R-A034-07 YWHAZ-SCAF11 4 10 chr8:100948596:- chr12:45951727:- INFRAME NA TCGA-AN-A0FD-01A-11R-A034-07 TMEM59L-GGNBP2 3 10 chr19:18620573:+ chr17:36581363:+ . NA TCGA-AN-A0FD-01A-11R-A034-07 TPM4-INTS2 1 18 chr19:16077130:+ chr17:61875038:- . NA TCGA-AN-A0FD-01A-11R-A034-07 PRKDC-CEP290 3 5 chr8:47831814:- chr12:88139564:- INFRAME NA TCGA-AN-A0FD-01A-11R-A034-07 PSMD12-KIAA2022 2 5 chr17:67366412:- chrX:74745697:- . NA TCGA-AN-A0FD-01A-11R-A034-07 RPL18A-HELZ 1 7 chr19:17862223:+ chr17:67145890:- FRAMESHIFT NA TCGA-AN-A0FF-01A-11R-A034-07 SOS2-NEMF 3 35 chr14:50231197:- chr14:49795944:- FRAMESHIFT NA TCGA-AN-A0FF-01A-11R-A034-07 ENAH-PTPN14 1 10 chr1:225512657:- chr1:214378102:- INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 EIF4G1-ABCF3 59 173 chr3:184334834:+ chr3:184193102:+ INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 NSD1-CDH23 26 60 chr5:177136030:+ chr10:71675112:+ INFRAME Likely Oncogenic NA TCGA-AN-A0FJ-01A-11R-A00Z-07 GRB2-ACOX1 7 36 chr17:75393551:- chr17:75953620:- INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 MYO9B-DDA1 2 53 chr19:17102557:+ chr19:17314023:+ INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 IL12RB2-PDE4B 7 15 chr1:67330810:+ chr1:66372313:+ FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 ABI2-CARF 1 27 chr2:203402734:+ chr2:202981555:+ INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 KCNC4-GSTM4 3 19 chr1:110226178:+ chr1:109665011:+ FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 FAM83D-SF3B3 2 21 chr20:38942126:+ chr16:70563876:+ FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 CTPS2-RBBP7 3 15 chrX:16667514:- chrX:16849301:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 PACSIN2-NUPL2 2 16 chr22:42912021:- chr7:23185070:+ FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 SYNPO2-TRIM24 4 8 chr4:118889141:+ chr7:138567481:+ INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 CTDSPL-TMCC1 5 3 chr3:37971499:+ chr3:129671264:- INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 HDGF-RRNAD1 3 10 chr1:156745008:- chr1:156736632:+ FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 GALNT14-FAM98A 2 11 chr2:31137958:- chr2:33595637:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 EXTL2-DPH5 1 14 chr1:100894633:- chr1:101021765:- . NA TCGA-AN-A0FJ-01A-11R-A00Z-07 DNMT1-ICAM3 2 9 chr19:10173090:- chr19:10335976:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 NR2C2-FGD5 3 5 chr3:14947906:+ chr3:14864128:+ . NA TCGA-AN-A0FJ-01A-11R-A00Z-07 ABR-CLUH 1 10 chr17:1050050:- chr17:2704564:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 BRD1-TTLL8 1 10 chr22:49822951:- chr22:50034462:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 CDH23-NSD1 1 10 chr10:71741921:+ chr5:177191884:+ INFRAME Likely Oncogenic NA TCGA-AN-A0FJ-01A-11R-A00Z-07 TNRC18-RNF216 1 9 chr7:5370375:- chr7:5641376:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 UBR4-HSPG2 1 8 chr1:19169435:- chr1:21844299:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 UMODL1-WRB 2 3 chr21:42109699:+ chr21:39408606:+ . NA TCGA-AN-A0FJ-01A-11R-A00Z-07 CMIP-CDYL2 1 6 chr16:81445541:+ chr16:80685129:- INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 RALGAPB-CTNNBL1 1 6 chr20:38521698:+ chr20:37777345:+ FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 DYM-MYO5B 1 5 chr18:49378567:- chr18:49849660:- FRAMESHIFT NA TCGA-AN-A0FJ-01A-11R-A00Z-07 DNER-TRIP12 1 3 chr2:229546947:- chr2:229785855:- INFRAME NA TCGA-AN-A0FJ-01A-11R-A00Z-07 ITGB4-ADK 1 3 chr17:75757107:+ chr10:74314667:+ INFRAME NA TCGA-AN-A0FK-01A-11R-A034-07 VANGL1-ATP1A1 1 8 chr1:115671147:+ chr1:116384014:+ . NA TCGA-AN-A0FL-01A-11R-A034-07 SLPI-MATN4 8 21 chr20:45254459:- chr20:45305616:- . NA TCGA-AN-A0FL-01A-11R-A034-07 CEP70-COPB2 3 12 chr3:138570318:- chr3:139383435:- INFRAME NA TCGA-AN-A0FL-01A-11R-A034-07 RNF185-SMTN 1 6 chr22:31195581:+ chr22:31080450:+ . NA TCGA-AN-A0FL-01A-11R-A034-07 HN1L-CRAMP1 1 4 chr16:1678356:+ chr16:1673881:+ FRAMESHIFT NA TCGA-AN-A0FL-01A-11R-A034-07 QSOX1-SMR3B 1000 1000 chr1:180196568:+ chr4:70390007:+ . NA TCGA-AN-A0FT-01A-11R-A034-07 SSH2-LBP 21 148 chr17:29695459:- chr20:38373937:+ INFRAME NA TCGA-AN-A0FT-01A-11R-A034-07 WDR45B-SEPT4 31 46 chr17:82625389:- chr17:58522101:- FRAMESHIFT NA TCGA-AN-A0FT-01A-11R-A034-07 STAT3-C17orf102 6 16 chr17:42345559:- chr17:34576574:- . NA TCGA-AN-A0FT-01A-11R-A034-07 PRDM11-MRPS9 3 6 chr11:45147581:+ chr2:105071313:+ . NA TCGA-AN-A0FT-01A-11R-A034-07 CRCP-CYYR1 2 9 chr7:66134374:+ chr21:26566368:- FRAMESHIFT NA TCGA-AN-A0FV-01A-11R-A00Z-07 RARA-PCTP 739 3475 chr17:40318448:+ chr17:55771106:+ . NA TCGA-AN-A0FV-01A-11R-A00Z-07 TMEM135-AAMDC 106 1244 chr11:87091395:+ chr11:77841019:+ . NA TCGA-AN-A0FV-01A-11R-A00Z-07 URGCP-CCDC129 40 216 chr7:43887415:- chr7:31642176:+ INFRAME NA TCGA-AN-A0FV-01A-11R-A00Z-07 STX16-MYT1 31 155 chr20:58652087:+ chr20:64190063:+ . NA TCGA-AN-A0FV-01A-11R-A00Z-07 THRSP-KCTD14 19 68 chr11:78064341:+ chr11:78017270:- . NA TCGA-AN-A0FV-01A-11R-A00Z-07 CDK12-NUFIP2 5 54 chr17:39556413:+ chr17:29267530:- . Likely Oncogenic NA TCGA-AN-A0FV-01A-11R-A00Z-07 POLM-OGDH 6 43 chr7:44073625:- chr7:44700141:+ INFRAME NA TCGA-AN-A0FV-01A-11R-A00Z-07 WIPF2-SEZ6 8 28 chr17:40219492:+ chr17:28982039:- . NA TCGA-AN-A0FV-01A-11R-A00Z-07 PLXNB2-DLG2 3 31 chr22:50294719:- chr11:83980642:- . NA TCGA-AN-A0FV-01A-11R-A00Z-07 MYO18A-ZBTB46 5 9 chr17:29165942:- chr20:63790790:- . NA TCGA-AN-A0FV-01A-11R-A00Z-07 PKN2-COL24A1 2 6 chr1:88684628:+ chr1:85987654:- INFRAME NA TCGA-AN-A0FV-01A-11R-A00Z-07 FBXL20-CASS4 2 3 chr17:39401361:- chr20:56445900:+ INFRAME NA TCGA-AN-A0FV-01A-11R-A00Z-07 PGLS-GTPBP3 2 3 chr19:17517850:+ chr19:17341478:+ FRAMESHIFT NA TCGA-AN-A0FW-01A-11R-A034-07 DDX42-DCAF7 8 83 chr17:63774376:+ chr17:63578470:+ . NA TCGA-AN-A0FW-01A-11R-A034-07 SUPT4H1-PSMD12 11 63 chr17:58351402:- chr17:67345857:- FRAMESHIFT NA TCGA-AN-A0FW-01A-11R-A034-07 ZPLD1-NXPE3 5 29 chr3:102229341:+ chr3:101816795:+ . NA TCGA-AN-A0FW-01A-11R-A034-07 UQCR11-CERS4 3 34 chr19:1605360:- chr19:8206754:+ . NA TCGA-AN-A0FW-01A-11R-A034-07 ZBTB2-SYNE1 5 20 chr6:151373465:- chr6:152249262:- FRAMESHIFT NA TCGA-AN-A0FW-01A-11R-A034-07 SOGA1-MROH8 1 17 chr20:36862658:- chr20:37110355:- INFRAME NA TCGA-AN-A0FW-01A-11R-A034-07 ZFAND1-PAG1 4 5 chr8:81713918:- chr8:81070170:- . NA TCGA-AN-A0FW-01A-11R-A034-07 PDZD7-TLX1NB 2 10 chr10:101029994:- chr10:101127098:- . NA TCGA-AN-A0FW-01A-11R-A034-07 NEDD4-RFX7 1 11 chr15:55966473:- chr15:56087509:- . NA TCGA-AN-A0FW-01A-11R-A034-07 POGZ-THEM4 1 7 chr1:151427823:- chr1:151895194:- INFRAME NA TCGA-AN-A0FW-01A-11R-A034-07 WTIP-KIAA0355 1 6 chr19:34493622:+ chr19:34299679:+ . NA TCGA-AN-A0FX-01A-11R-A034-07 TM9SF3-PIK3AP1 78 27 chr10:96586734:- chr10:96616711:- INFRAME NA TCGA-AN-A0FX-01A-11R-A034-07 CHD8-RAB2B 6 18 chr14:21456032:- chr14:21468752:- . NA TCGA-AN-A0FX-01A-11R-A034-07 GGT6-PELP1 5 16 chr17:4560382:- chr17:4676812:- FRAMESHIFT NA TCGA-AN-A0FX-01A-11R-A034-07 PYCR1-NOTUM 4 19 chr17:81935337:- chr17:81958995:- FRAMESHIFT NA TCGA-AN-A0FX-01A-11R-A034-07 CPAMD8-SAP18 5 9 chr19:16896176:- chr13:21146805:+ INFRAME NA TCGA-AN-A0FX-01A-11R-A034-07 CACNA1C-WNT5B 2 18 chr12:2120430:+ chr12:1631298:+ . NA TCGA-AN-A0FX-01A-11R-A034-07 RRM2-RREB1 2 5 chr2:10129154:+ chr6:7176655:+ . NA TCGA-AN-A0FX-01A-11R-A034-07 COL7A1-UQCRC1 1 3 chr3:48582323:- chr3:48601467:- FRAMESHIFT NA TCGA-AN-A0FY-01A-11R-A034-07 DIAPH3-TDRD3 45 228 chr13:60093628:- chr13:60567525:+ INFRAME NA TCGA-AN-A0FY-01A-11R-A034-07 SYCP2-BCAS1 3 28 chr20:59865388:- chr20:53957497:- INFRAME NA TCGA-AN-A0FY-01A-11R-A034-07 UBE2C-CDH26 4 20 chr20:45814470:+ chr20:59968967:+ INFRAME NA TCGA-AN-A0FY-01A-11R-A034-07 AHR-CDK14 1 5 chr7:17299329:+ chr7:91112542:+ INFRAME NA TCGA-AN-A0FY-01A-11R-A034-07 TDRD3-DIAPH3 1 3 chr13:60510755:+ chr13:59924870:- INFRAME NA TCGA-AN-A0FY-01A-11R-A034-07 NAA38-RABEP1 1000 1000 chr17:7883236:- chr17:5381388:+ . NA TCGA-AN-A0FZ-01A-11R-A034-07 NRIP1-HIBADH 324 1812 chr21:15014344:- chr7:27531348:- . NA TCGA-AN-A0FZ-01A-11R-A034-07 CPSF6-MDM1 32 192 chr12:69262562:+ chr12:68295366:- FRAMESHIFT NA TCGA-AN-A0FZ-01A-11R-A034-07 OSBPL8-TSHZ2 3 97 chr12:76450851:- chr20:53487144:+ . NA TCGA-AN-A0FZ-01A-11R-A034-07 SELENOF-COL24A1 5 34 chr1:86880662:- chr1:85737505:- INFRAME NA TCGA-AN-A0FZ-01A-11R-A034-07 SKAP2-SCIN 8 17 chr7:26844030:- chr7:12578064:+ INFRAME NA TCGA-AN-A0FZ-01A-11R-A034-07 HS2ST1-GBP6 4 26 chr1:86915160:+ chr1:89368529:+ . NA TCGA-AN-A0FZ-01A-11R-A034-07 TRIM44-SLC5A12 6 17 chr11:35806442:+ chr11:26712706:- . NA TCGA-AN-A0FZ-01A-11R-A034-07 PCSK6-LINS1 6 15 chr15:101443556:- chr15:100574241:- FRAMESHIFT NA TCGA-AN-A0FZ-01A-11R-A034-07 FRS2-MDM1 6 14 chr12:69532056:+ chr12:68331221:- . NA TCGA-AN-A0FZ-01A-11R-A034-07 NARFL-RBBP6 7 10 chr16:740920:- chr16:24546163:+ FRAMESHIFT NA TCGA-AN-A0FZ-01A-11R-A034-07 ANKRD42-RHOD 5 12 chr11:83248087:+ chr11:67070425:+ INFRAME NA TCGA-AN-A0FZ-01A-11R-A034-07 BMS1-PLEKHA7 3 9 chr10:42802218:+ chr11:16871182:- FRAMESHIFT NA TCGA-AN-A0FZ-01A-11R-A034-07 ZNRF2-VANGL1 2 3 chr7:30323737:+ chr1:115682364:+ FRAMESHIFT NA TCGA-AN-A0FZ-01A-11R-A034-07 BACH1-TTC3 1 3 chr21:29329693:+ chr21:37121817:+ INFRAME NA TCGA-AN-A0FZ-01A-11R-A034-07 DNAJC15-UFM1 1 1 chr13:43023734:+ chr13:38349999:+ FRAMESHIFT NA TCGA-AN-A0FZ-01A-11R-A034-07 ZPLD1-NXPE3 1 1 chr3:102229341:+ chr3:101782110:+ . NA TCGA-AN-A0XN-01A-21R-A109-07 SIPA1L3-LSM14A 4 8 chr19:38029156:+ chr19:34215124:+ . NA TCGA-AN-A0XN-01A-21R-A109-07 LTBP1-CDH23 4 6 chr2:33222151:+ chr10:71510082:+ INFRAME NA TCGA-AN-A0XN-01A-21R-A109-07 LINC-PINT-RSBN1L 3 4 chr7:131107720:- chr7:77749424:+ . NA TCGA-AN-A0XN-01A-21R-A109-07 FAM160A1-DDX60 2 6 chr4:151482648:+ chr4:168225676:- . NA TCGA-AN-A0XN-01A-21R-A109-07 PPID-SFRP2 1 9 chr4:158719180:- chr4:153781755:- FRAMESHIFT NA TCGA-AN-A0XN-01A-21R-A109-07 CDH23-LTBP1 1 8 chr10:71446395:+ chr2:33243662:+ INFRAME NA TCGA-AN-A0XN-01A-21R-A109-07 AGPAT3-NAALADL2 2 3 chr21:43904019:+ chr3:175803005:+ . NA TCGA-AN-A0XN-01A-21R-A109-07 TBC1D12-MORN4 2 3 chr10:94474783:+ chr10:97619683:- . NA TCGA-AN-A0XN-01A-21R-A109-07 ITSN2-ATRNL1 1 2 chr2:24360304:- chr10:115519263:+ . NA TCGA-AN-A0XO-01A-11R-A109-07 OSBPL1A-LETM2 2 11 chr18:24397655:- chr8:38400272:+ . NA TCGA-AN-A0XO-01A-11R-A109-07 LRCH1-TBC1D31 1 4 chr13:46553703:+ chr8:123144717:+ FRAMESHIFT NA TCGA-AN-A0XO-01A-11R-A109-07 RNF122-NSD3 1 4 chr8:33566699:- chr8:38348215:- . NA TCGA-AN-A0XT-01A-11R-A109-07 ULK2-DOCK6 6 18 chr17:19838501:- chr19:11253726:- FRAMESHIFT NA TCGA-AN-A0XT-01A-11R-A109-07 DHPS-HOOK2 5 2 chr19:12681518:- chr19:12767424:- . NA TCGA-AN-A0XT-01A-11R-A109-07 ALAS1-HHEX 3 1 chr3:52208211:+ chr10:92690189:+ INFRAME NA TCGA-AN-A0XT-01A-11R-A109-07 TPGS1-PRKACA 1 9 chr19:507844:+ chr19:14093237:- FRAMESHIFT NA TCGA-AN-A0XT-01A-11R-A109-07 ULK2-MBD3 1 6 chr17:19843121:- chr19:1585214:- FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 SLC25A10-HGS 21 24 chr17:81716050:+ chr17:81700467:+ FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 MRPS23-CUEDC1 6 41 chr17:57849967:- chr17:57868243:- FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 NAT10-CAPRIN1 8 26 chr11:34108833:+ chr11:34096479:+ FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 ABTB2-ATXN3 2 8 chr11:34356701:- chr14:92096838:- FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 CACHD1-RNF2 3 4 chr1:64682106:+ chr1:185087552:+ . NA TCGA-AN-A0XU-01A-11R-A109-07 ELMOD3-TTC27 2 5 chr2:85362260:+ chr2:32702807:+ INFRAME NA TCGA-AN-A0XU-01A-11R-A109-07 PHYHD1-LRRC8A 2 5 chr9:128927196:+ chr9:128916096:+ INFRAME NA TCGA-AN-A0XU-01A-11R-A109-07 PRKAG2-CA10 2 5 chr7:151632069:- chr17:52072393:- INFRAME NA TCGA-AN-A0XU-01A-11R-A109-07 RNF2-CACHD1 1 7 chr1:185045649:+ chr1:64671564:+ . NA TCGA-AN-A0XU-01A-11R-A109-07 ABTB2-NDUFB1 1 6 chr11:34356701:- chr14:92116229:- FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 ITGB6-COMMD1 1 6 chr2:160169212:- chr2:62135831:+ INFRAME NA TCGA-AN-A0XU-01A-11R-A109-07 JADE3-MTA3 2 1 chrX:46998277:+ chr2:42682401:+ FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 ORC2-ALS2CR12 1 5 chr2:200925836:- chr2:201309250:- FRAMESHIFT NA TCGA-AN-A0XU-01A-11R-A109-07 UBE2Q2-METTL6 1 3 chr15:75854487:+ chr3:15439388:- . NA TCGA-AN-A0XV-01A-11R-A109-07 RNF19A-COX6C 6 1131 chr8:100309867:- chr8:99892052:- . NA TCGA-AN-A0XV-01A-11R-A109-07 SLC25A32-LAPTM4B 32 115 chr8:103414784:- chr8:97851397:+ FRAMESHIFT NA TCGA-AN-A0XV-01A-11R-A109-07 TPD52-COPS5 33 98 chr8:80171425:- chr8:67059445:- FRAMESHIFT NA TCGA-AN-A0XV-01A-11R-A109-07 PDE7A-NKAIN3 4 41 chr8:65841371:- chr8:62579539:+ INFRAME NA TCGA-AN-A0XV-01A-11R-A109-07 CD46-PDC 2 4 chr1:207752309:+ chr1:186449483:- . NA TCGA-AN-A0XV-01A-11R-A109-07 VCPIP1-CDH17 2 4 chr8:66651458:- chr8:94165976:- INFRAME NA TCGA-AN-A0XV-01A-11R-A109-07 ASH1L-GPATCH4 1 2 chr1:155347656:- chr1:156599104:- . NA TCGA-AN-A0XW-01A-11R-A109-07 PREP-TPCN2 9 32 chr6:105402847:- chr11:69135435:+ FRAMESHIFT NA TCGA-AN-A0XW-01A-11R-A109-07 BCAS3-RAD51C 5 31 chr17:60808076:+ chr17:58724040:+ FRAMESHIFT Likely Oncogenic NA TCGA-AN-A0XW-01A-11R-A109-07 SSH2-TNFAIP1 3 22 chr17:29793894:- chr17:28339408:+ . NA TCGA-AN-A0XW-01A-11R-A109-07 RFWD2-SRGAP2 4 9 chr1:176206572:- chr1:206458623:+ INFRAME NA TCGA-AN-A0XW-01A-11R-A109-07 NSRP1-SKAP1 4 6 chr17:30116863:+ chr17:48396785:- FRAMESHIFT NA TCGA-AN-A0XW-01A-11R-A109-07 SPTLC3-MRPL45P2 3 5 chr20:13126717:+ chr17:47456793:- . NA TCGA-AO-A03L-01A-41R-A056-07 EAF2-RGS9 101 341 chr3:121835391:+ chr17:65225002:+ INFRAME NA TCGA-AO-A03L-01A-41R-A056-07 IQCB1-CACNG4 42 197 chr3:121834391:- chr17:67018189:+ . NA TCGA-AO-A03L-01A-41R-A056-07 ZNF587B-ZSCAN4 7 49 chr19:57819945:+ chr19:57670245:+ . NA TCGA-AO-A03L-01A-41R-A056-07 ITGB5-PARP14 11 19 chr3:124769013:- chr3:122708190:+ FRAMESHIFT NA TCGA-AO-A03L-01A-41R-A056-07 OSBPL2-EDEM2 6 35 chr20:62256221:+ chr20:35142478:- FRAMESHIFT NA TCGA-AO-A03L-01A-41R-A056-07 ZNF321P-ERGIC3 12 10 chr19:52942541:- chr20:35542323:+ . NA TCGA-AO-A03L-01A-41R-A056-07 TANC2-WFDC21P 4 32 chr17:63319090:+ chr17:60085203:- . NA TCGA-AO-A03L-01A-41R-A056-07 CMSS1-TBKBP1 5 18 chr3:99818043:+ chr17:47696079:+ . NA TCGA-AO-A03L-01A-41R-A056-07 TPRG1-DGKG 4 4 chr3:189215383:+ chr3:186265306:- FRAMESHIFT NA TCGA-AO-A03L-01A-41R-A056-07 MED13-VMP1 3 7 chr17:61950825:- chr17:59838295:+ FRAMESHIFT NA TCGA-AO-A03L-01A-41R-A056-07 UQCC1-CACNA2D4 2 9 chr20:35366557:- chr12:1810587:- FRAMESHIFT NA TCGA-AO-A03L-01A-41R-A056-07 STMN3-DGKG 1000 1000 chr20:63641299:- chr3:186280744:- . NA TCGA-AO-A03M-01B-11R-A10J-07 RBL1-CTNNBL1 51 113 chr20:37088989:- chr20:37871925:+ FRAMESHIFT NA TCGA-AO-A03M-01B-11R-A10J-07 SNHG17-BCAS1 19 118 chr20:38426419:- chr20:53996050:- . NA TCGA-AO-A03M-01B-11R-A10J-07 FBXL20-SNX11 10 34 chr17:39343180:- chr17:48119011:+ FRAMESHIFT NA TCGA-AO-A03M-01B-11R-A10J-07 SAMHD1-DDX27 6 34 chr20:36897822:- chr20:49236333:+ INFRAME NA TCGA-AO-A03M-01B-11R-A10J-07 ZNF217-ZNFX1 2 3 chr20:53575727:- chr20:49239300:- FRAMESHIFT NA TCGA-AO-A03M-01B-11R-A10J-07 CTNNBL1-TSHZ2 1 4 chr20:37803048:+ chr20:53253499:+ INFRAME NA TCGA-AO-A03O-01A-11R-A00Z-07 ATP8B1-NARS 44 143 chr18:57731627:- chr18:57611707:- INFRAME NA TCGA-AO-A03O-01A-11R-A00Z-07 TRIO-IFT52 6 14 chr5:14502657:+ chr20:43603760:+ FRAMESHIFT NA TCGA-AO-A03O-01A-11R-A00Z-07 VPS26A-GDAP1L1 4 20 chr10:69133047:+ chr20:44263230:+ FRAMESHIFT NA TCGA-AO-A03O-01A-11R-A00Z-07 GRB2-CD24 3 14 chr17:75319744:- chr6:106970532:- . NA TCGA-AO-A03O-01A-11R-A00Z-07 ZNF107-FAM83D 3 12 chr7:64691960:+ chr20:38941959:+ FRAMESHIFT NA TCGA-AO-A03O-01A-11R-A00Z-07 RFX3-RELB 2 12 chr9:3395472:- chr19:45025329:+ FRAMESHIFT NA TCGA-AO-A03O-01A-11R-A00Z-07 TBK1-ARHGAP5 2 2 chr12:64455957:+ chr14:32117140:+ INFRAME NA TCGA-AO-A03O-01A-11R-A00Z-07 TBCD-CPM 1 3 chr17:82814934:+ chr12:68885889:- INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 THSD4-ALDH1A2 38 239 chr15:71411823:+ chr15:58014281:- INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 RAB27A-SQRDL 35 75 chr15:55270165:- chr15:45676101:+ . NA TCGA-AO-A03P-01A-11R-A00Z-07 VPS37C-SLC3A2 29 76 chr11:61161391:- chr11:62884457:+ . NA TCGA-AO-A03P-01A-11R-A00Z-07 MICU1-TSPAN3 18 36 chr10:72533746:- chr15:77056255:- INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 ZNF564-WIZ 12 38 chr19:12551330:- chr19:15427533:- FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 ICE2-CIB1 7 57 chr15:60442416:- chr15:90233703:- FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 ADK-TTC23 9 36 chr10:74176886:+ chr15:99228732:- . NA TCGA-AO-A03P-01A-11R-A00Z-07 ZSCAN29-MGMT 11 25 chr15:43369596:- chr10:129707895:+ FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 C10orf11-CYP2C19 13 7 chr10:75438494:+ chr10:94849917:+ FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 FAM149B1-KCNMA1 9 23 chr10:73210438:+ chr10:77019099:- FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 PBLD-LRRC28 9 23 chr10:68288483:- chr15:99255898:+ . NA TCGA-AO-A03P-01A-11R-A00Z-07 USP8-TRPM7 4 29 chr15:50424514:+ chr15:50583159:- . NA TCGA-AO-A03P-01A-11R-A00Z-07 INPP5A-FAM149B1 6 18 chr10:132749845:+ chr10:73239312:+ INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 GRID1-PGPEP1L 4 22 chr10:86138819:- chr15:98971158:- INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 SPG11-CAMK2G 4 22 chr15:44573547:- chr10:73853246:- INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 GALK2-NAPSA 3 14 chr15:49239367:+ chr19:50362313:- FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 KAT6A-IKBKB 3 10 chr8:42048378:- chr8:42305187:+ INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 OSBPL2-PLD1 3 9 chr20:62263691:+ chr3:171620520:- FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 UBR1-SUPV3L1 1 14 chr15:42966153:- chr10:69185987:+ INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 ATP8B4-MGMT 3 4 chr15:50010845:- chr10:129536241:+ INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 FNDC3B-NLGN1 2 8 chr3:172226947:+ chr3:174275315:+ FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 USP8-AGBL1 2 6 chr15:50424514:+ chr15:86674273:+ . NA TCGA-AO-A03P-01A-11R-A00Z-07 JMJD1C-GABPB1 1 9 chr10:63465495:- chr15:50309798:- INFRAME NA TCGA-AO-A03P-01A-11R-A00Z-07 ARFGEF2-RNF114 1 8 chr20:48922010:+ chr20:49941561:+ FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 ZNF106-ADK 1 5 chr15:42417805:- chr10:74670183:+ FRAMESHIFT NA TCGA-AO-A03P-01A-11R-A00Z-07 INPP5A-PPIP5K1 1 4 chr10:132765846:+ chr15:43539583:- FRAMESHIFT NA TCGA-AO-A03T-01A-21R-A034-07 TMEM234-CCDC28B 13 55 chr1:32214665:- chr1:32203879:+ . NA TCGA-AO-A03T-01A-21R-A034-07 TUSC3-SORBS3 2 5 chr8:15623249:+ chr8:22563987:+ INFRAME NA TCGA-AO-A03T-01A-21R-A034-07 ATAD2-CCDC26 1 7 chr8:123356389:- chr8:129352980:- . NA TCGA-AO-A03T-01A-21R-A034-07 EXT1-TINAGL1 1 1 chr8:118110085:- chr1:31583149:+ INFRAME NA TCGA-AO-A03U-01B-21R-A10J-07 BCL7A-KCNIP3 16 42 chr12:122035427:+ chr2:95374296:+ INFRAME NA TCGA-AO-A03U-01B-21R-A10J-07 TRIP12-COL6A3 2 16 chr2:229789611:- chr2:237396847:- . NA TCGA-AO-A03U-01B-21R-A10J-07 CSN1S1-MGP 1 9 chr4:69935949:+ chr12:14882280:- FRAMESHIFT NA TCGA-AO-A03V-01A-11R-A115-07 DNAJB12-SLC25A16 41 102 chr10:72354765:- chr10:68506718:- INFRAME NA TCGA-AO-A03V-01A-11R-A115-07 ZNF587B-SRC 14 144 chr19:57819945:+ chr20:37400115:+ . NA TCGA-AO-A03V-01A-11R-A115-07 BAX-ALDH16A1 29 72 chr19:48956333:+ chr19:49460822:+ FRAMESHIFT NA TCGA-AO-A03V-01A-11R-A115-07 TMEM203-TMEM87A 29 66 chr9:137204104:- chr15:42211749:- . NA TCGA-AO-A03V-01A-11R-A115-07 ZNF586-SRC 3 149 chr19:57790400:+ chr20:37400115:+ INFRAME NA TCGA-AO-A03V-01A-11R-A115-07 TPRN-TMEM87A 29 42 chr9:137204104:- chr15:42211749:- . NA TCGA-AO-A03V-01A-11R-A115-07 PLEKHA1-FAM187B 25 30 chr10:122374806:+ chr19:35225212:- . NA TCGA-AO-A03V-01A-11R-A115-07 SLTM-ATE1 13 44 chr15:58912563:- chr10:121743858:- FRAMESHIFT NA TCGA-AO-A03V-01A-11R-A115-07 TSPAN9-CACNA1C 15 35 chr12:3215355:+ chr12:2664825:+ . NA TCGA-AO-A03V-01A-11R-A115-07 SNX16-PCCA 1 66 chr8:81842122:- chr13:100340157:+ . NA TCGA-AO-A03V-01A-11R-A115-07 UNC13B-DNER 6 40 chr9:35162305:+ chr2:229418230:- INFRAME NA TCGA-AO-A03V-01A-11R-A115-07 BRSK1-HSPBP1 12 8 chr19:55284578:+ chr19:55266286:- INFRAME NA TCGA-AO-A03V-01A-11R-A115-07 SGMS1-PARG 11 10 chr10:50433476:- chr10:49885295:- . NA TCGA-AO-A03V-01A-11R-A115-07 RAB22A-NLRP5 7 19 chr20:58359735:+ chr19:56003736:+ . NA TCGA-AO-A03V-01A-11R-A115-07 PPP6R1-AURKC 4 24 chr19:55258435:- chr19:57232033:+ . NA TCGA-AO-A03V-01A-11R-A115-07 MGMT-LGI4 2 11 chr10:129536377:+ chr19:35131860:- INFRAME NA TCGA-AO-A03V-01A-11R-A115-07 ZNF528-ZNF8 4 3 chr19:52397904:+ chr19:58294098:+ . NA TCGA-AO-A03V-01A-11R-A115-07 CTNNA3-MGMT 2 5 chr10:66621692:- chr10:129536241:+ INFRAME NA TCGA-AO-A03V-01A-11R-A115-07 HSPBP1-VRK3 2 5 chr19:55274398:- chr19:50020647:- . NA TCGA-AO-A03V-01A-11R-A115-07 GNAL-CSNK1E 1 6 chr18:11753945:+ chr22:38303248:- FRAMESHIFT NA TCGA-AO-A03V-01A-11R-A115-07 GPR35-MELK 1 2 chr2:240619031:+ chr9:36642997:+ FRAMESHIFT NA TCGA-AO-A03V-01A-11R-A115-07 POLR3H-ENTHD1 1000 1000 chr22:41540699:- chr22:39862007:- INFRAME NA TCGA-AO-A0J2-01A-11R-A034-07 DIP2A-PRR4 8 373 chr21:46490719:+ chr12:10848407:- INFRAME NA TCGA-AO-A0J2-01A-11R-A034-07 FDFT1-NEIL2 20 79 chr8:11803518:+ chr8:11783203:+ . NA TCGA-AO-A0J2-01A-11R-A034-07 B4GALNT3-CCDC77 7 7 chr12:460545:+ chr12:418494:+ FRAMESHIFT NA TCGA-AO-A0J2-01A-11R-A034-07 ZC3HAV1-ITPKB 5 12 chr7:139064879:- chr1:226648771:- FRAMESHIFT NA TCGA-AO-A0J2-01A-11R-A034-07 ZNF292-FIG4 3 19 chr6:87155759:+ chr6:109776922:+ INFRAME NA TCGA-AO-A0J2-01A-11R-A034-07 MCUB-C4BPA 1 24 chr4:109560436:+ chr1:207143818:+ FRAMESHIFT NA TCGA-AO-A0J2-01A-11R-A034-07 ITPKB-ZC3HAV1 4 10 chr1:226735527:- chr7:139064999:- INFRAME NA TCGA-AO-A0J2-01A-11R-A034-07 CASZ1-CROCCP2 4 8 chr1:10693874:- chr1:16643145:- . NA TCGA-AO-A0J2-01A-11R-A034-07 TMEM87B-MERTK 4 8 chr2:112055756:+ chr2:112028351:+ INFRAME NA TCGA-AO-A0J2-01A-11R-A034-07 EVC-MGST1 2 12 chr4:5783764:+ chr12:16354231:+ . NA TCGA-AO-A0J2-01A-11R-A034-07 TGDS-DAPK1 1 7 chr13:94596051:- chr9:87706132:+ FRAMESHIFT NA TCGA-AO-A0J2-01A-11R-A034-07 ANKLE2-CHFR 1000 1000 chr12:132747832:- chr12:132833237:- . NA TCGA-AO-A0J3-01A-11R-A034-07 KDM2A-PPP6R3 56 91 chr11:67121358:+ chr11:68596097:+ FRAMESHIFT NA TCGA-AO-A0J3-01A-11R-A034-07 CCT3-SYT2 22 87 chr1:156333547:- chr1:202605789:- . NA TCGA-AO-A0J3-01A-11R-A034-07 TRIM36-HEXB 10 17 chr5:115169608:- chr5:74689328:+ FRAMESHIFT NA TCGA-AO-A0J3-01A-11R-A034-07 ELN-METTL2A 5 23 chr7:74028269:+ chr17:62440617:+ FRAMESHIFT NA TCGA-AO-A0J3-01A-11R-A034-07 KANSL1-KDM2A 2 29 chr17:46223671:- chr11:67121234:+ . NA TCGA-AO-A0J3-01A-11R-A034-07 NOS1AP-COLGALT2 3 7 chr1:162154476:+ chr1:183944323:- INFRAME NA TCGA-AO-A0J3-01A-11R-A034-07 KIRREL-TMCO1 1000 1000 chr1:158098083:+ chr1:165768269:- . NA TCGA-AO-A0J4-01A-11R-A034-07 NCK1-RAB6B 6 9 chr3:136862319:+ chr3:133841663:- . NA TCGA-AO-A0J4-01A-11R-A034-07 UBA2-PEPD 4 10 chr19:34428570:+ chr19:33413643:- FRAMESHIFT NA TCGA-AO-A0J4-01A-11R-A034-07 C8orf76-NKAIN3 4 9 chr8:123226500:- chr8:62579539:+ INFRAME NA TCGA-AO-A0J4-01A-11R-A034-07 ABI1-CCDC7 2 14 chr10:26768852:- chr10:32778977:+ FRAMESHIFT NA TCGA-AO-A0J4-01A-11R-A034-07 GRAMD1A-CCDC88A 2 3 chr19:35000486:+ chr2:55388886:- INFRAME NA TCGA-AO-A0J4-01A-11R-A034-07 TDRD3-DIAPH3 1 1 chr13:60444748:+ chr13:59810923:- INFRAME NA TCGA-AO-A0J5-01A-11R-A034-07 FAM49B-KAT6A 12 36 chr8:129871375:- chr8:41934867:- FRAMESHIFT NA TCGA-AO-A0J5-01A-11R-A034-07 USP32-RAD51C 7 55 chr17:60391882:- chr17:58694931:+ INFRAME Likely Oncogenic NA TCGA-AO-A0J5-01A-11R-A034-07 CYB561-USP32 14 18 chr17:63446245:- chr17:60345608:- . NA TCGA-AO-A0J5-01A-11R-A034-07 KIF13B-SARAF 5 33 chr8:29146378:- chr8:30070059:- INFRAME NA TCGA-AO-A0J5-01A-11R-A034-07 VMP1-MARCH10 10 10 chr17:59817773:+ chr17:62711344:- FRAMESHIFT NA TCGA-AO-A0J5-01A-11R-A034-07 CDR2L-PECAM1 2 37 chr17:75002228:+ chr17:64390763:- . NA TCGA-AO-A0J5-01A-11R-A034-07 COA1-MRPS24 6 21 chr7:43729429:- chr7:43869074:- . NA TCGA-AO-A0J5-01A-11R-A034-07 ARSG-ANKFN1 6 17 chr17:68351686:+ chr17:56492187:+ FRAMESHIFT NA TCGA-AO-A0J5-01A-11R-A034-07 ARSG-BPTF 8 6 chr17:68291568:+ chr17:67903789:+ . NA TCGA-AO-A0J5-01A-11R-A034-07 ARHGAP32-FCHSD2 3 12 chr11:129164319:- chr11:73083740:- FRAMESHIFT NA TCGA-AO-A0J5-01A-11R-A034-07 PSMC5-PECAM1 5 4 chr17:63831965:+ chr17:64390763:- . NA TCGA-AO-A0J5-01A-11R-A034-07 TM9SF3-TLL2 2 1 chr10:96561978:- chr10:96446168:- FRAMESHIFT NA TCGA-AO-A0J5-01A-11R-A034-07 NOL11-HSF5 1 3 chr17:67743586:+ chr17:58422430:- FRAMESHIFT NA TCGA-AO-A0J5-01A-11R-A034-07 ACE-CCDC47 1000 1000 chr17:63493580:+ chr17:63773627:- . NA TCGA-AO-A0J6-01A-11R-A034-07 ARHGEF3-ACP6 6 38 chr3:56882292:- chr1:147659775:- INFRAME NA TCGA-AO-A0J6-01A-11R-A034-07 TCF7L2-TACC2 2 4 chr10:113040126:+ chr10:122195040:+ FRAMESHIFT Likely Oncogenic NA TCGA-AO-A0J6-01A-11R-A034-07 CCDC6-UBE2D1 1 2 chr10:59906122:- chr10:58361338:+ INFRAME NA TCGA-AO-A0J7-01A-11R-A034-07 ERN1-EIF3C 2 1 chr17:64066671:- chr16:28723164:+ INFRAME NA TCGA-AO-A0J7-01A-11R-A034-07 UBE2E1-INTS10 2 1 chr3:23887699:+ chr8:19830406:+ INFRAME NA TCGA-AO-A0JA-01A-11R-A056-07 LRCH3-MED12L 2 6 chr3:197817302:+ chr3:151116338:+ INFRAME NA TCGA-AO-A0JD-01A-11R-A056-07 TMEM134-SPTBN2 18 88 chr11:67467312:- chr11:66699082:- FRAMESHIFT NA TCGA-AO-A0JD-01A-11R-A056-07 MPP5-MAGI2-AS3 8 37 chr14:67241533:+ chr7:79458847:+ . NA TCGA-AO-A0JD-01A-11R-A056-07 TMEM123-CNTN5 11 15 chr11:102401539:- chr11:99556145:+ . NA TCGA-AO-A0JD-01A-11R-A056-07 NDUFAF2-ANKRD31 3 17 chr5:60945382:+ chr5:75169121:- INFRAME NA TCGA-AO-A0JD-01A-11R-A056-07 TRIP11-CYP46A1 1 11 chr14:91995352:- chr14:99699466:+ FRAMESHIFT NA TCGA-AO-A0JD-01A-11R-A056-07 CORO1C-ANKS1B 1 9 chr12:108731429:- chr12:98751522:- . NA TCGA-AO-A0JE-01A-11R-A056-07 EFHD1-EIF4E2 168 488 chr2:232672443:+ chr2:232564247:+ INFRAME NA TCGA-AO-A0JE-01A-11R-A056-07 SMC1A-GTPBP6 7 32 chrX:53394778:- chrY:305197:- FRAMESHIFT NA TCGA-AO-A0JE-01A-11R-A056-07 ZNF331-NLRP11 1 21 chr19:53571730:+ chr19:55801739:- FRAMESHIFT NA TCGA-AO-A0JE-01A-11R-A056-07 MCPH1-CSMD1 2 8 chr8:6455252:+ chr8:3493726:- INFRAME NA TCGA-AO-A0JE-01A-11R-A056-07 ATP6V1G1-TNC 1 2 chr9:114587920:+ chr9:115021267:- FRAMESHIFT NA TCGA-AO-A0JG-01A-31R-A084-07 FOXK2-SKAP1 31 105 chr17:82587272:+ chr17:48396785:- INFRAME NA TCGA-AO-A0JG-01A-31R-A084-07 ZNF184-CD2AP 10 25 chr6:27467853:- chr6:47533602:+ INFRAME NA TCGA-AO-A0JG-01A-31R-A084-07 YPEL2-ATP5G1 6 28 chr17:59331824:+ chr17:48893409:+ . NA TCGA-AO-A0JG-01A-31R-A084-07 SKAP1-TMEM100 3 37 chr17:48345905:- chr17:55727982:- . NA TCGA-AO-A0JG-01A-31R-A084-07 GAB2-AAMDC 5 17 chr11:78417646:- chr11:77918061:+ INFRAME NA TCGA-AO-A0JG-01A-31R-A084-07 YPEL2-UBE2Z 2 10 chr17:59331824:+ chr17:48916076:+ . NA TCGA-AO-A0JG-01A-31R-A084-07 BRIP1-WFDC21P 1 10 chr17:61776401:- chr17:60083766:- . Likely Oncogenic NA TCGA-AO-A0JG-01A-31R-A084-07 GFOD1-CYP39A1 1 4 chr6:13486638:- chr6:46639668:- INFRAME NA TCGA-AO-A0JM-01A-21R-A056-07 NME2-CEP112 6 99 chr17:51166497:+ chr17:65641065:- . NA TCGA-AO-A0JM-01A-21R-A056-07 DCUN1D1-CCDC50 14 17 chr3:182961226:- chr3:191357088:+ INFRAME NA TCGA-AO-A0JM-01A-21R-A056-07 TRIM25-TBX4 4 18 chr17:56892018:- chr17:61482900:+ FRAMESHIFT NA TCGA-AO-A0JM-01A-21R-A056-07 ERBB2-ARL5C 7 4 chr17:39712448:+ chr17:39165139:- FRAMESHIFT NA TCGA-AO-A0JM-01A-21R-A056-07 MED1-STAC2 1 26 chr17:39419717:- chr17:39212396:- FRAMESHIFT NA TCGA-AO-A0JM-01A-21R-A056-07 NAALADL2-PEX5L 4 13 chr3:175471758:+ chr3:179819976:- INFRAME NA TCGA-AO-A0JM-01A-21R-A056-07 GPR160-PRKCI 1 23 chr3:170039043:+ chr3:170259969:+ . NA TCGA-AO-A0JM-01A-21R-A056-07 LLGL2-CA10 2 14 chr17:75571100:+ chr17:51747818:- FRAMESHIFT NA TCGA-AO-A0JM-01A-21R-A056-07 CDK12-FBXL20 1 15 chr17:39471763:+ chr17:39282855:- INFRAME Likely Oncogenic NA TCGA-AO-A0JM-01A-21R-A056-07 FAM131A-NAA50 1 4 chr3:184342860:+ chr3:113724092:- FRAMESHIFT NA TCGA-AO-A124-01A-11R-A10J-07 SMC5-IMMP2L 164 497 chr9:70267975:+ chr7:110963565:- INFRAME NA TCGA-AO-A124-01A-11R-A10J-07 KDM5A-NINJ2 24 43 chr12:295573:- chr12:566178:- INFRAME NA TCGA-AO-A124-01A-11R-A10J-07 FXN-SMC5 8 42 chr9:69065035:+ chr9:70264304:+ INFRAME NA TCGA-AO-A124-01A-11R-A10J-07 SAP30BP-KCTD2 8 22 chr17:75668625:+ chr17:75035232:+ . NA TCGA-AO-A124-01A-11R-A10J-07 SEMA4C-WNT5B 8 19 chr2:96863682:- chr12:1631298:+ . NA TCGA-AO-A124-01A-11R-A10J-07 TESK2-GPR37L1 5 22 chr1:45457564:- chr1:202127741:+ INFRAME NA TCGA-AO-A124-01A-11R-A10J-07 AFG3L1P-TUBB3 3 26 chr16:89981923:+ chr16:89932571:+ . NA TCGA-AO-A124-01A-11R-A10J-07 IGF2BP3-ACSM1 2 23 chr7:23351305:- chr16:20671671:- INFRAME NA TCGA-AO-A124-01A-11R-A10J-07 CRB3-RTP1 3 13 chr19:6466609:+ chr3:187197590:+ FRAMESHIFT NA TCGA-AO-A124-01A-11R-A10J-07 FIG4-WASF1 4 9 chr6:109743772:+ chr6:110113460:- FRAMESHIFT NA TCGA-AO-A124-01A-11R-A10J-07 KMT2C-CALN1 1 19 chr7:152162117:- chr7:72106294:- FRAMESHIFT Likely Oncogenic NA TCGA-AO-A124-01A-11R-A10J-07 STK3-RREB1 4 3 chr8:98579664:- chr6:7210804:+ FRAMESHIFT NA TCGA-AO-A126-01A-11R-A10J-07 NCOR2-RILPL2 18 28 chr12:124327568:- chr12:123418587:- . NA TCGA-AO-A128-01A-11R-A10J-07 CHD8-TOX4 24 90 chr14:21430801:- chr14:21489173:+ INFRAME NA TCGA-AO-A128-01A-11R-A10J-07 PCMTD1-ST18 2 13 chr8:51898930:- chr8:52166986:- FRAMESHIFT NA TCGA-AO-A128-01A-11R-A10J-07 KIFAP3-METTL11B 1 15 chr1:170074436:- chr1:170157969:+ . NA TCGA-AO-A128-01A-11R-A10J-07 USP37-RNF25 2 8 chr2:218529956:- chr2:218668679:- INFRAME NA TCGA-AO-A128-01A-11R-A10J-07 LUC7L3-ABCC3 2 4 chr17:50744813:+ chr17:50672971:+ INFRAME NA TCGA-AO-A128-01A-11R-A10J-07 RFTN1-DAZL 1 6 chr3:16493725:- chr3:16598598:- FRAMESHIFT NA TCGA-AO-A128-01A-11R-A10J-07 QTRT1-ILF3 1 4 chr19:10713040:+ chr19:10688550:+ FRAMESHIFT NA TCGA-AO-A129-01A-21R-A10J-07 SENP5-PIGZ 18 83 chr3:196886694:+ chr3:196952031:- FRAMESHIFT NA TCGA-AO-A129-01A-21R-A10J-07 MAPK14-MICU2 15 34 chr6:36076599:+ chr13:21539688:- INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 GRK2-BAIAP2 11 12 chr11:67284373:+ chr17:81084832:+ INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 FAM114A1-IQCE 7 20 chr4:38935790:+ chr7:2589907:+ INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 UBA52-KXD1 4 26 chr19:18573748:+ chr19:18562036:+ . NA TCGA-AO-A129-01A-21R-A10J-07 LPP-RTP1 3 17 chr3:188225527:+ chr3:187197590:+ . NA TCGA-AO-A129-01A-21R-A10J-07 PLOD2-ABCG1 5 5 chr3:146106532:- chr21:42225671:+ INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 HSF1-MROH1 2 14 chr8:144291874:+ chr8:144250212:+ INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 OSBPL5-ADGRG5 4 5 chr11:3119547:- chr16:57562056:+ . NA TCGA-AO-A129-01A-21R-A10J-07 UBE2G2-RUNX1 4 5 chr21:44801706:- chr21:34799462:- INFRAME Likely Oncogenic NA TCGA-AO-A129-01A-21R-A10J-07 SMC2-PGM5 2 10 chr9:104129845:+ chr9:68499227:+ INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 PSKH1-NUTF2 2 7 chr16:67909706:+ chr16:67865102:+ . NA TCGA-AO-A129-01A-21R-A10J-07 TOMM40-NECTIN2 1 10 chr19:44891689:+ chr19:44871853:+ INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 SENP7-RFC4 2 5 chr3:101327666:- chr3:186797614:- INFRAME NA TCGA-AO-A129-01A-21R-A10J-07 STAG1-CCDC77 2 5 chr3:136752195:- chr12:405511:+ . NA TCGA-AO-A129-01A-21R-A10J-07 POLR2F-GGA1 1 5 chr22:37967170:+ chr22:37616922:+ INFRAME NA TCGA-AO-A12A-01A-21R-A115-07 CHD4-CLEC9A 5 38 chr12:6577785:- chr12:10041466:+ . NA TCGA-AO-A12A-01A-21R-A115-07 GRHPR-GATA3 1 1 chr9:37422833:+ chr10:8073739:+ FRAMESHIFT Likely Oncogenic NA TCGA-AO-A12D-01A-11R-A115-07 PCMTD2-SNX6 10 47 chr20:64265429:+ chr14:34609742:- INFRAME NA TCGA-AO-A12D-01A-11R-A115-07 SUSD4-NVL 4 18 chr1:223363278:- chr1:224281185:- FRAMESHIFT NA TCGA-AO-A12D-01A-11R-A115-07 CAPN2-BROX 3 4 chr1:223717831:+ chr1:222715684:+ . NA TCGA-AO-A12D-01A-11R-A115-07 NOA1-PPP3CA 3 2 chr4:56966620:- chr4:101196116:- FRAMESHIFT NA TCGA-AO-A12D-01A-11R-A115-07 ANK3-TMPRSS15 1 3 chr10:60134271:- chr21:18315256:- FRAMESHIFT NA TCGA-AO-A12E-01A-11R-A10J-07 CDH1-VPS50 131 336 chr16:68823626:+ chr7:93323611:+ INFRAME Likely Oncogenic NA TCGA-AO-A12E-01A-11R-A10J-07 VPS50-CDH1 10 40 chr7:93311272:+ chr16:68828174:+ INFRAME Likely Oncogenic NA TCGA-AO-A12E-01A-11R-A10J-07 GALNT11-PRKAG2 8 23 chr7:152113398:+ chr7:151565885:- INFRAME NA TCGA-AO-A12E-01A-11R-A10J-07 PRKAG2-KMT2C 2 2 chr7:151632069:- chr7:152136924:- FRAMESHIFT Likely Oncogenic NA TCGA-AO-A12E-01A-11R-A10J-07 DDX23-SMAGP 1 2 chr12:48843940:- chr12:51269316:- . NA TCGA-AO-A12E-01A-11R-A10J-07 INTS9-AZIN1 1 1 chr8:28796544:- chr8:102887147:- . NA TCGA-AO-A12F-01A-11R-A115-07 RPRD1A-RALGAPA2 8 23 chr18:36030808:- chr20:20680801:- FRAMESHIFT NA TCGA-AO-A12F-01A-11R-A115-07 B4GALT7-NSD1 4 10 chr5:177608622:+ chr5:177191884:+ INFRAME Likely Oncogenic NA TCGA-AO-A12G-01A-11R-A10J-07 ZNF79-FAM129B 65 235 chr9:127436003:+ chr9:127507431:- INFRAME NA TCGA-AO-A12G-01A-11R-A10J-07 ARID5B-ABLIM1 19 43 chr10:61940408:+ chr10:114441786:- INFRAME Likely Oncogenic NA TCGA-AO-A12G-01A-11R-A10J-07 RALGPS1-ZNF79 1 3 chr9:126977745:+ chr9:127428832:+ FRAMESHIFT NA TCGA-AO-A1KO-01A-31R-A13Q-07 LALBA-CSN2 7 663 chr12:48569122:- chr4:69957492:- INFRAME NA TCGA-AO-A1KO-01A-31R-A13Q-07 CSN2-LALBA 3 522 chr4:69957493:- chr12:48569121:- INFRAME NA TCGA-AO-A1KO-01A-31R-A13Q-07 CSN1S1-CSN2 1 192 chr4:69932606:+ chr4:69957804:- INFRAME NA TCGA-AO-A1KO-01A-31R-A13Q-07 CSN2-CSN1S1 1 167 chr4:69957274:- chr4:69935926:+ INFRAME NA TCGA-AO-A1KO-01A-31R-A13Q-07 PAFAH1B2-CSN2 1000 1000 chr11:117137370:+ chr4:69955449:- . NA TCGA-AO-A1KO-01A-31R-A13Q-07 ERBB3-CSN2 1000 1000 chr12:56102327:+ chr4:69961007:- . NA TCGA-AO-A1KO-01A-31R-A13Q-07 KIAA1324-CSN2 1000 1000 chr1:109205443:+ chr4:69957768:- . NA TCGA-AO-A1KO-01A-31R-A13Q-07 NACA-CSN2 1000 1000 chr12:56712886:- chr4:69957351:- FRAMESHIFT NA TCGA-AO-A1KO-01A-31R-A13Q-07 ATP1A1-CSN2 1000 1000 chr1:116388712:+ chr4:69957648:- INFRAME NA TCGA-AO-A1KO-01A-31R-A13Q-07 DYNC1H1-CSN2 1000 1000 chr14:102050792:+ chr4:69961007:- . NA TCGA-AO-A1KO-01A-31R-A13Q-07 HNRNPA1-CSN2 1000 1000 chr12:54285104:+ chr4:69957615:- . NA TCGA-AO-A1KO-01A-31R-A13Q-07 EHF-CSN2 1000 1000 chr11:34651795:+ chr4:69957780:- INFRAME NA TCGA-AO-A1KO-01A-31R-A13Q-07 ATL2-CSN2 1000 1000 chr2:38294880:- chr4:69957634:- . NA TCGA-AO-A1KO-01A-31R-A13Q-07 CCSER2-CSN2 1000 1000 chr10:84514587:+ chr4:69961007:- . NA TCGA-AO-A1KP-01A-11R-A13Q-07 NUP93-GPT2 2 2 chr16:56839604:+ chr16:46928907:+ FRAMESHIFT NA TCGA-AO-A1KR-01A-12R-A144-07 ZBTB7B-CKS1B 31 37 chr1:155002943:+ chr1:154977987:+ . NA TCGA-AO-A1KR-01A-12R-A144-07 SPOP-TAC4 11 33 chr17:49677933:- chr17:49844157:- . Likely Oncogenic NA TCGA-AO-A1KR-01A-12R-A144-07 NXF1-TAF6L 9 24 chr11:62797588:- chr11:62786749:+ . NA TCGA-AO-A1KR-01A-12R-A144-07 CS-PRIM1 3 37 chr12:56273587:- chr12:56731734:- FRAMESHIFT NA TCGA-AO-A1KR-01A-12R-A144-07 SLC3A2-NXF1 4 26 chr11:62856381:+ chr11:62795007:- INFRAME NA TCGA-AO-A1KR-01A-12R-A144-07 SEC24D-PLRG1 1 28 chr4:118751996:- chr4:154536744:- INFRAME NA TCGA-AO-A1KR-01A-12R-A144-07 MRAS-NME9 2 18 chr3:138373076:+ chr3:138306480:- INFRAME NA TCGA-AO-A1KR-01A-12R-A144-07 ST3GAL1-COL22A1 2 14 chr8:133475719:- chr8:138703347:- INFRAME NA TCGA-AO-A1KR-01A-12R-A144-07 SNTB1-COL22A1 1 12 chr8:120693692:- chr8:138703347:- FRAMESHIFT NA TCGA-AO-A1KR-01A-12R-A144-07 CPAMD8-HAUS8 2 7 chr19:16975097:- chr19:17050176:- FRAMESHIFT NA TCGA-AO-A1KR-01A-12R-A144-07 FEM1A-SELENOM 3 3 chr19:4795137:+ chr22:31105965:- . NA TCGA-AO-A1KR-01A-12R-A144-07 FNIP2-LARP7 3 2 chr4:158835476:+ chr4:112650461:+ INFRAME NA TCGA-AO-A1KR-01A-12R-A144-07 LRRC37B-RAD51C 2 2 chr17:32018054:+ chr17:58734118:+ . Likely Oncogenic NA TCGA-AO-A1KR-01A-12R-A144-07 MTDH-SNX31 1 5 chr8:97644887:+ chr8:100636011:- INFRAME NA TCGA-AO-A1KS-01A-11R-A13Q-07 PREX1-EHBP1 5 18 chr20:48827642:- chr2:62706897:+ . NA TCGA-AO-A1KS-01A-11R-A13Q-07 B3GLCT-USPL1 2 7 chr13:31323895:+ chr13:30642628:+ FRAMESHIFT NA TCGA-AO-A1KS-01A-11R-A13Q-07 RPL34-DHRS12 1 1 chr4:108622204:+ chr13:51768296:- FRAMESHIFT NA TCGA-AO-A1KT-01A-11R-A13Q-07 GRK2-TPCN2 127 862 chr11:67277348:+ chr11:69135435:+ FRAMESHIFT NA TCGA-AO-A1KT-01A-11R-A13Q-07 RAB11FIP1-ZDHHC24 26 119 chr8:37899071:- chr11:66527006:- FRAMESHIFT NA TCGA-AO-A1KT-01A-11R-A13Q-07 NSD3-GAB2 22 67 chr8:38381799:- chr11:78280901:- . NA TCGA-AO-A1KT-01A-11R-A13Q-07 WBP1L-ADAMTS2 1 8 chr10:102744143:+ chr5:179273064:- INFRAME NA TCGA-AO-A1KT-01A-11R-A13Q-07 NFIA-ST6GALNAC3 2 2 chr1:61406727:+ chr1:76576846:+ . NA TCGA-AQ-A04H-01B-11R-A10J-07 PPFIA1-CBLB 35 110 chr11:70362488:+ chr3:105740631:- FRAMESHIFT NA TCGA-AQ-A04H-01B-11R-A10J-07 RPS6KB1-RNF213 18 68 chr17:59893924:+ chr17:80371874:+ . NA TCGA-AQ-A04H-01B-11R-A10J-07 AATF-TADA2A 1 18 chr17:36953907:+ chr17:37474556:+ INFRAME NA TCGA-AQ-A04H-01B-11R-A10J-07 PTRH2-PEX5L 4 6 chr17:59707371:- chr3:179859157:- . NA TCGA-AQ-A04H-01B-11R-A10J-07 RAC3-ABCA8 2 11 chr17:82031796:+ chr17:68869779:- INFRAME NA TCGA-AQ-A04H-01B-11R-A10J-07 RNF213-DGKG 1 14 chr17:80373165:+ chr3:186105942:- . NA TCGA-AQ-A04H-01B-11R-A10J-07 RNF213-ETV5 1 14 chr17:80373165:+ chr3:186105942:- . NA TCGA-AQ-A04H-01B-11R-A10J-07 THOC2-RHOXF2B 1 9 chrX:123732952:- chrX:120077288:- FRAMESHIFT NA TCGA-AQ-A04H-01B-11R-A10J-07 CBX8-ACTL6A 1 5 chr17:79801401:- chr3:179580894:+ . NA TCGA-AQ-A04J-01A-02R-A034-07 PUM1-RPH3AL 6 33 chr1:31059204:- chr17:319549:- FRAMESHIFT NA TCGA-AQ-A04J-01A-02R-A034-07 NUP153-RNF2 7 23 chr6:17706277:- chr1:185087552:+ . NA TCGA-AQ-A04J-01A-02R-A034-07 APOLD1-CDKN1B 8 18 chr12:12726096:+ chr12:12721036:+ . Likely Oncogenic NA TCGA-AQ-A04J-01A-02R-A034-07 LSM10-CLSTN1 1 12 chr1:36393766:- chr1:9730705:- FRAMESHIFT NA TCGA-AQ-A04J-01A-02R-A034-07 MKRN2-CCDC191 1 7 chr3:12557176:+ chr3:114001696:- FRAMESHIFT NA TCGA-AQ-A0Y5-01A-11R-A14M-07 ZNF217-BCAS3 66 418 chr20:53597631:- chr17:61368327:+ . NA TCGA-AQ-A0Y5-01A-11R-A14M-07 LSM14A-ACTN4 83 317 chr19:34172763:+ chr19:38700600:+ FRAMESHIFT NA TCGA-AQ-A0Y5-01A-11R-A14M-07 BRD4-CC2D1A 29 3 chr19:15332290:- chr19:13912323:+ . Oncogenic NA TCGA-AQ-A0Y5-01A-11R-A14M-07 NBPF26-TMEM150C 6 47 chr1:120724250:+ chr4:82504667:- . NA TCGA-AQ-A0Y5-01A-11R-A14M-07 MAP2K2-CAMKK1 4 14 chr19:4110509:- chr17:3885730:- FRAMESHIFT NA TCGA-AQ-A0Y5-01A-11R-A14M-07 MMD-LRRC37A11P 2 15 chr17:55407746:- chr17:39044388:+ . NA TCGA-AQ-A1H2-01A-11R-A13Q-07 FRK-DTNBP1 6 6 chr6:116059968:- chr6:15533395:- FRAMESHIFT NA TCGA-AQ-A7U7-01A-22R-A352-07 ERGIC1-JAKMIP2 4 38 chr5:172834433:+ chr5:147612371:- FRAMESHIFT NA TCGA-AQ-A7U7-01A-22R-A352-07 PIK3CB-RASA2 1 6 chr3:138665036:- chr3:141516328:+ INFRAME Likely Oncogenic NA TCGA-AR-A0TP-01A-11R-A084-07 FGF12-SYN3 7 13 chr3:192335361:- chr22:32596736:- INFRAME NA TCGA-AR-A0TP-01A-11R-A084-07 AIM1-ARMC2 4 19 chr6:106544697:+ chr6:108973357:+ FRAMESHIFT NA TCGA-AR-A0TP-01A-11R-A084-07 PDPK1-CCNF 1 18 chr16:2538771:+ chr16:2445458:+ . NA TCGA-AR-A0TP-01A-11R-A084-07 BOC-SLC35A5 1 14 chr3:113250833:+ chr3:112569171:+ INFRAME NA TCGA-AR-A0TP-01A-11R-A084-07 JAK1-ZC3H7B 2 9 chr1:64846649:- chr22:41343415:+ INFRAME Likely Oncogenic NA TCGA-AR-A0TQ-01A-11R-A084-07 TADA2A-MED24 39 149 chr17:37458587:+ chr17:40036154:- FRAMESHIFT NA TCGA-AR-A0TQ-01A-11R-A084-07 SPAG9-TADA2A 12 46 chr17:51056412:- chr17:37411269:+ . NA TCGA-AR-A0TQ-01A-11R-A084-07 TNFRSF6B-IKZF3 12 28 chr20:63697170:+ chr17:39760053:- . NA TCGA-AR-A0TQ-01A-11R-A084-07 BRIP1-SPAG9 9 26 chr17:61857058:- chr17:51079704:- FRAMESHIFT Likely Oncogenic NA TCGA-AR-A0TQ-01A-11R-A084-07 BCAS3-CYTH1 7 11 chr17:60924500:+ chr17:78709732:- INFRAME NA TCGA-AR-A0TQ-01A-11R-A084-07 SPAG9-BRIP1 4 13 chr17:51056412:- chr17:61847220:- INFRAME Likely Oncogenic NA TCGA-AR-A0TQ-01A-11R-A084-07 GRB7-BRIP1 3 10 chr17:39745788:+ chr17:61857231:- INFRAME Likely Oncogenic NA TCGA-AR-A0TQ-01A-11R-A084-07 PTPN1-MIR646HG 1 16 chr20:50510590:+ chr20:60180835:+ . NA TCGA-AR-A0TQ-01A-11R-A084-07 RFX3-SLC24A2 2 2 chr9:3330259:- chr9:19622299:- INFRAME NA TCGA-AR-A0TQ-01A-11R-A084-07 RNF114-PTPN1 1 3 chr20:49949355:+ chr20:50561363:+ INFRAME NA TCGA-AR-A0TS-01A-11R-A115-07 VGLL4-SYNPR 22 42 chr3:11702971:- chr3:63556543:+ FRAMESHIFT NA TCGA-AR-A0TS-01A-11R-A115-07 GNL2-DNAH3 15 52 chr1:37595759:- chr16:21117339:- . NA TCGA-AR-A0TS-01A-11R-A115-07 DSN1-SOGA1 13 41 chr20:36754763:- chr20:36786637:- FRAMESHIFT NA TCGA-AR-A0TS-01A-11R-A115-07 FOXO3-PPP1R9A 4 27 chr6:108561829:+ chr7:95247473:+ INFRAME NA TCGA-AR-A0TS-01A-11R-A115-07 GRK2-IQGAP1 1 31 chr11:67266812:+ chr15:90426110:+ INFRAME NA TCGA-AR-A0TS-01A-11R-A115-07 USP13-MAP3K21 5 15 chr3:179653393:+ chr1:233382305:+ FRAMESHIFT NA TCGA-AR-A0TS-01A-11R-A115-07 PPP1R9A-FOXO3 4 17 chr7:95226116:+ chr6:108663455:+ INFRAME NA TCGA-AR-A0TS-01A-11R-A115-07 U2AF2-RERE 2 20 chr19:55661189:+ chr1:8365974:- INFRAME NA TCGA-AR-A0TS-01A-11R-A115-07 PDXK-RRP1B 1 5 chr21:43734123:+ chr21:43669884:+ INFRAME NA TCGA-AR-A0TT-01A-31R-A084-07 MTF1-SF3A3 20 68 chr1:37857251:- chr1:37969735:- INFRAME NA TCGA-AR-A0TT-01A-31R-A084-07 MAPKAPK2-NBPF13P 21 42 chr1:206685508:+ chr1:147116319:- . NA TCGA-AR-A0TT-01A-31R-A084-07 CEP95-RGS9 21 39 chr17:64526199:+ chr17:65117054:+ . NA TCGA-AR-A0TT-01A-31R-A084-07 ASH1L-FAM78B 12 19 chr1:155395459:- chr1:166070763:- FRAMESHIFT NA TCGA-AR-A0TT-01A-31R-A084-07 EFNA3-USP21 7 35 chr1:155086205:+ chr1:161160620:+ . NA TCGA-AR-A0TT-01A-31R-A084-07 USP21-IL19 3 48 chr1:161164958:+ chr1:206842659:+ . NA TCGA-AR-A0TT-01A-31R-A084-07 UBE2Q1-MAEL 5 22 chr1:154552736:- chr1:167005076:+ FRAMESHIFT NA TCGA-AR-A0TT-01A-31R-A084-07 CCSER2-MBL3P 4 25 chr10:84373815:+ chr10:79584376:- . NA TCGA-AR-A0TT-01A-31R-A084-07 MAK16-ANGPT2 6 13 chr8:33490339:+ chr8:6532487:- INFRAME NA TCGA-AR-A0TT-01A-31R-A084-07 INPP5A-DLG2 3 15 chr10:132650505:+ chr11:84534731:- INFRAME NA TCGA-AR-A0TT-01A-31R-A084-07 AKAP8-MYO9B 2 11 chr19:15379713:- chr19:17101660:+ . NA TCGA-AR-A0TT-01A-31R-A084-07 AKAP8L-EFCAB3 2 11 chr19:15397150:- chr17:62395068:+ FRAMESHIFT NA TCGA-AR-A0TT-01A-31R-A084-07 CYP2B7P-ITPKC 1 8 chr19:40942206:+ chr19:40733160:+ . NA TCGA-AR-A0TT-01A-31R-A084-07 EGLN1-PGBD5 2 4 chr1:231420998:- chr1:230357321:- FRAMESHIFT NA TCGA-AR-A0TT-01A-31R-A084-07 LIG3-KXD1 1 8 chr17:34986131:+ chr19:18562036:+ . NA TCGA-AR-A0TT-01A-31R-A084-07 ZBTB7B-FCAMR 2 4 chr1:155015814:+ chr1:206970220:- . NA TCGA-AR-A0TT-01A-31R-A084-07 DDA1-TMIGD1 2 3 chr19:17309657:+ chr17:30329529:- FRAMESHIFT NA TCGA-AR-A0TT-01A-31R-A084-07 DUSP12-NAV1 1 7 chr1:161750145:+ chr1:201780421:+ INFRAME NA TCGA-AR-A0TT-01A-31R-A084-07 IZUMO2-CYTH2 1 5 chr19:50158268:- chr19:48472325:+ FRAMESHIFT NA TCGA-AR-A0TT-01A-31R-A084-07 BLZF1-MPC2 1 3 chr1:169369550:+ chr1:167924537:- INFRAME NA TCGA-AR-A0TT-01A-31R-A084-07 SIPA1L3-ETHE1 1 3 chr19:38164906:+ chr19:43511566:- FRAMESHIFT NA TCGA-AR-A0TV-01A-21R-A084-07 COX6C-ZFPM2 10 124 chr8:99887490:- chr8:104895407:+ . NA TCGA-AR-A0TV-01A-21R-A084-07 LRP12-KCNB2 8 22 chr8:104588819:- chr8:72567642:+ . NA TCGA-AR-A0TV-01A-21R-A084-07 HECTD1-PRPF39 2 10 chr14:31205797:- chr14:45095221:+ . NA TCGA-AR-A0TV-01A-21R-A084-07 MTSS1-ZC2HC1A 1 13 chr8:124562782:- chr8:78675787:+ FRAMESHIFT NA TCGA-AR-A0TV-01A-21R-A084-07 CTIF-LOXHD1 1 10 chr18:48539312:+ chr18:46509815:- . NA TCGA-AR-A0TV-01A-21R-A084-07 GRHL2-ZFHX4 2 3 chr8:101492789:+ chr8:76704043:+ . NA TCGA-AR-A0TV-01A-21R-A084-07 ZNF236-DTNA 1 3 chr18:76928106:+ chr18:34513515:+ . NA TCGA-AR-A0TW-01A-11R-A084-07 DHX35-DNTTIP1 13 68 chr20:38983776:+ chr20:45810885:+ INFRAME NA TCGA-AR-A0TW-01A-11R-A084-07 MED23-KLHL32 11 62 chr6:131618407:- chr6:97041492:+ INFRAME NA TCGA-AR-A0TW-01A-11R-A084-07 ATG5-RSPH10B 8 35 chr6:106248150:- chr7:5932875:- INFRAME NA TCGA-AR-A0TW-01A-11R-A084-07 WDR70-PLCXD3 5 36 chr5:37516590:+ chr5:41313770:- INFRAME NA TCGA-AR-A0TW-01A-11R-A084-07 VAPB-CASS4 8 21 chr20:58389517:+ chr20:56458340:+ FRAMESHIFT NA TCGA-AR-A0TW-01A-11R-A084-07 ADCY1-EYA4 5 23 chr7:45575182:+ chr6:133274716:+ . NA TCGA-AR-A0TW-01A-11R-A084-07 TBC1D15-SEPHS1 3 14 chr12:71873002:+ chr10:13319034:- . NA TCGA-AR-A0TW-01A-11R-A084-07 SLC9A8-RAE1 4 7 chr20:49874821:+ chr20:57374607:+ FRAMESHIFT NA TCGA-AR-A0TW-01A-11R-A084-07 CAPZB-C2orf88 1 9 chr1:19485436:- chr2:190079954:+ . NA TCGA-AR-A0TW-01A-11R-A084-07 RAE1-C20orf85 1 5 chr20:57374801:+ chr20:58160661:+ INFRAME NA TCGA-AR-A0TW-01A-11R-A084-07 ZFR-TARS 1000 1000 chr5:32444229:- chr5:33441046:+ . NA TCGA-AR-A0TX-01A-11R-A084-07 STAU1-CTSA 81 667 chr20:49174195:- chr20:45891173:+ . NA TCGA-AR-A0TX-01A-11R-A084-07 RARA-ZNF595 123 439 chr17:40331396:+ chr4:59430:+ FRAMESHIFT NA TCGA-AR-A0TX-01A-11R-A084-07 PMEPA1-PTGIS 21 66 chr20:57709474:- chr20:49514395:- FRAMESHIFT NA TCGA-AR-A0TX-01A-11R-A084-07 ABAT-C16orf62 13 80 chr16:8674711:+ chr16:19651976:+ . NA TCGA-AR-A0TX-01A-11R-A084-07 TMEM159-DNAH3 11 75 chr16:21174148:+ chr16:21062683:- INFRAME NA TCGA-AR-A0TX-01A-11R-A084-07 ARHGAP23-ASIC2 23 9 chr17:38479883:+ chr17:33024014:- INFRAME NA TCGA-AR-A0TX-01A-11R-A084-07 ARFGEF2-FAM19A5 3 69 chr20:48922010:+ chr22:48646597:+ INFRAME NA TCGA-AR-A0TX-01A-11R-A084-07 PPM1H-USP15 5 20 chr12:62934492:- chr12:62294179:+ INFRAME NA TCGA-AR-A0TX-01A-11R-A084-07 CACNB1-MLLT6 2 21 chr17:39183713:- chr17:38722678:+ FRAMESHIFT NA TCGA-AR-A0TX-01A-11R-A084-07 THRA-CACNB1 3 12 chr17:40077039:+ chr17:39191542:- . NA TCGA-AR-A0TX-01A-11R-A084-07 PPM1H-SRGAP1 4 7 chr12:62832114:- chr12:64142295:+ INFRAME NA TCGA-AR-A0TX-01A-11R-A084-07 CACNB1-CDC6 4 3 chr17:39194884:- chr17:40289408:+ . NA TCGA-AR-A0TX-01A-11R-A084-07 COQ7-OSBPL2 2 7 chr16:19075860:+ chr20:62256057:+ . NA TCGA-AR-A0TX-01A-11R-A084-07 USP15-CDH4 1 5 chr12:62355475:+ chr20:61743563:+ FRAMESHIFT NA TCGA-AR-A0TY-01A-12R-A115-07 RMDN1-ESRP1 81 254 chr8:86506995:- chr8:94662501:+ INFRAME NA TCGA-AR-A0TY-01A-12R-A115-07 TAOK1-EFCAB5 12 27 chr17:29517656:+ chr17:30091871:+ FRAMESHIFT NA TCGA-AR-A0TY-01A-12R-A115-07 SLC39A11-ENPP7 3 45 chr17:73092571:- chr17:79733597:+ . NA TCGA-AR-A0TY-01A-12R-A115-07 TNFRSF10A-BIN3 5 22 chr8:23212116:- chr8:22644803:- FRAMESHIFT NA TCGA-AR-A0TY-01A-12R-A115-07 NSMAF-DEPTOR 3 5 chr8:58623220:- chr8:119928400:+ INFRAME NA TCGA-AR-A0TY-01A-12R-A115-07 MYBL1-MMP16 2 1 chr8:66572482:- chr8:88074743:- INFRAME NA TCGA-AR-A0TZ-01A-12R-A084-07 OXNAD1-LRRTM4 16 38 chr3:16286448:+ chr2:76748916:- FRAMESHIFT NA TCGA-AR-A0TZ-01A-12R-A084-07 PEMT-NEU3 3 13 chr17:17591531:- chr11:74994509:+ FRAMESHIFT NA TCGA-AR-A0U0-01A-11R-A109-07 ASXL2-FKBP8 11 34 chr2:25845481:- chr19:18541998:- . Likely Oncogenic NA TCGA-AR-A0U0-01A-11R-A109-07 VPS13B-DACH1 1 5 chr8:99521010:+ chr13:71440692:- FRAMESHIFT NA TCGA-AR-A0U2-01A-11R-A109-07 PWWP2A-IQGAP2 17 44 chr5:160118805:- chr5:76562396:+ INFRAME NA TCGA-AR-A0U3-01A-11R-A109-07 TCF3-SYTL5 28 69 chr19:1615285:- chrX:38126588:+ INFRAME NA TCGA-AR-A0U3-01A-11R-A109-07 ZNF613-CYP2A6 6 104 chr19:51929896:+ chr19:40850351:- . NA TCGA-AR-A0U3-01A-11R-A109-07 FAM118B-DDX25 6 2 chr11:126211830:+ chr11:125921191:+ . NA TCGA-AR-A0U3-01A-11R-A109-07 EID2-C19orf54 4 9 chr19:39539529:- chr19:40751481:- . NA TCGA-AR-A0U3-01A-11R-A109-07 TYW1-C21orf91-OT1 3 10 chr7:67067403:+ chr21:17767698:- . NA TCGA-AR-A0U3-01A-11R-A109-07 SLC20A2-TUSC3 1 16 chr8:42501031:- chr8:15673747:+ . NA TCGA-AR-A0U3-01A-11R-A109-07 ARHGEF18-INSR 4 2 chr19:7444454:+ chr19:7267896:- FRAMESHIFT NA TCGA-AR-A0U3-01A-11R-A109-07 AP5S1-RNF24 3 4 chr20:3822293:+ chr20:3948279:- INFRAME NA TCGA-AR-A0U3-01A-11R-A109-07 RNF24-ISM1 2 6 chr20:3945177:- chr20:13279634:+ INFRAME NA TCGA-AR-A0U3-01A-11R-A109-07 TMX1-C14orf166 2 5 chr14:51249765:+ chr14:51999708:+ INFRAME NA TCGA-AR-A0U3-01A-11R-A109-07 EVL-TRAF3 2 4 chr14:100097658:+ chr14:102830334:+ . NA TCGA-AR-A0U3-01A-11R-A109-07 CWC25-FBXO47 1 5 chr17:38809702:- chr17:38943736:- FRAMESHIFT NA TCGA-AR-A0U3-01A-11R-A109-07 CAPNS1-GLUL 1 1 chr19:36142333:+ chr1:182386402:- FRAMESHIFT NA TCGA-AR-A0U3-01A-11R-A109-07 DYRK1A-TTC3 1 1 chr21:37367628:+ chr21:37108392:+ . NA TCGA-AR-A0U3-01A-11R-A109-07 DNAJC1-EBLN1 1000 1000 chr10:21920795:- chr10:22210021:- . NA TCGA-AR-A0U4-01A-11R-A109-07 WAC-LRRC37A6P 32 116 chr10:28535757:+ chr10:27246697:- . NA TCGA-AR-A0U4-01A-11R-A109-07 HERC4-RUFY2 16 29 chr10:68032778:- chr10:68345911:- INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 PHTF2-RAB1A 16 29 chr7:77840300:+ chr2:65089070:- INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 TMEM245-FRRS1L 10 33 chr9:109106508:- chr9:109149720:- INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 ZKSCAN5-SMO 8 41 chr7:99512591:+ chr7:129203384:+ INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 PRMT2-DIP2A 12 23 chr21:46644488:+ chr21:46565713:+ INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 RAB1A-PHTF2 7 28 chr2:65097971:- chr7:77893608:+ INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 PLCH2-PRKCZ 6 20 chr1:2430629:+ chr1:2135262:+ INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 FTSJ3-SCN4A 6 10 chr17:63820079:- chr17:63941993:- FRAMESHIFT NA TCGA-AR-A0U4-01A-11R-A109-07 GOLGA2P10-FSD2 3 13 chr15:82513666:- chr15:82766031:- . NA TCGA-AR-A0U4-01A-11R-A109-07 BCL3-ATP9B 5 4 chr19:44748128:+ chr18:79253381:+ . NA TCGA-AR-A0U4-01A-11R-A109-07 LIMA1-TRAPPC9 4 8 chr12:50248633:- chr8:139988836:- INFRAME NA TCGA-AR-A0U4-01A-11R-A109-07 NEK7-CRB1 4 6 chr1:198157276:+ chr1:197328422:+ . NA TCGA-AR-A0U4-01A-11R-A109-07 CP-WWTR1 2 12 chr3:149188052:- chr3:149669891:- . NA TCGA-AR-A0U4-01A-11R-A109-07 CARMIL1-MRS2 2 7 chr6:25284909:+ chr6:24405168:+ FRAMESHIFT NA TCGA-AR-A0U4-01A-11R-A109-07 PDZRN3-FCAMR 1 8 chr3:73602354:- chr1:206970220:- . NA TCGA-AR-A0U4-01A-11R-A109-07 VILL-CTDSPL 1 2 chr3:37999439:+ chr3:37957111:+ INFRAME NA TCGA-AR-A1AH-01A-11R-A12D-07 LRIG3-PIP4K2C 25 123 chr12:58913982:- chr12:57602971:+ . NA TCGA-AR-A1AH-01A-11R-A12D-07 TAF4-TCFL5 7 64 chr20:61997550:- chr20:62857635:- FRAMESHIFT NA TCGA-AR-A1AH-01A-11R-A12D-07 DLG1-ANKRD18DP 2 37 chr3:197282679:- chr3:198065806:- . NA TCGA-AR-A1AH-01A-11R-A12D-07 PCNX2-TAOK3 5 15 chr1:233135015:- chr12:118201465:- . NA TCGA-AR-A1AH-01A-11R-A12D-07 CCDC91-ETFRF1 5 13 chr12:28391411:+ chr12:25204091:+ INFRAME NA TCGA-AR-A1AH-01A-11R-A12D-07 NEBL-DNAJC1 3 10 chr10:20888097:- chr10:21766309:- INFRAME NA TCGA-AR-A1AH-01A-11R-A12D-07 PRICKLE1-FGD4 4 5 chr12:42589465:- chr12:32638655:+ . NA TCGA-AR-A1AH-01A-11R-A12D-07 AACS-DNAH10 2 9 chr12:125114557:+ chr12:123934621:+ FRAMESHIFT NA TCGA-AR-A1AH-01A-11R-A12D-07 ASB1-TRAF3IP1 1 4 chr2:238433695:+ chr2:238397459:+ FRAMESHIFT NA TCGA-AR-A1AH-01A-11R-A12D-07 LRIG3-DTX3 1 4 chr12:58913982:- chr12:57609077:+ INFRAME NA TCGA-AR-A1AI-01A-11R-A12P-07 CCND3-GUCA1B 22 40 chr6:42048501:- chr6:42188731:- . NA TCGA-AR-A1AI-01A-11R-A12P-07 ARID1A-NUDC 8 60 chr1:26762319:+ chr1:26911128:+ . Likely Oncogenic NA TCGA-AR-A1AI-01A-11R-A12P-07 SBNO1-EIF2B1 10 41 chr12:123364701:- chr12:123632446:- . NA TCGA-AR-A1AI-01A-11R-A12P-07 ELP2-GALNT1 12 24 chr18:36133316:+ chr18:35654560:+ . NA TCGA-AR-A1AI-01A-11R-A12P-07 TNPO3-RCAN1 3 6 chr7:128974868:- chr21:34523710:- FRAMESHIFT NA TCGA-AR-A1AI-01A-11R-A12P-07 NMUR1-PDE6D 3 2 chr2:231530359:- chr2:231739202:- . NA TCGA-AR-A1AI-01A-11R-A12P-07 ADK-RPP38 2 3 chr10:74176886:+ chr10:15111686:+ . NA TCGA-AR-A1AI-01A-11R-A12P-07 SYAP1-REPS2 1 5 chrX:16719899:+ chrX:17006221:+ FRAMESHIFT NA TCGA-AR-A1AI-01A-11R-A12P-07 COL18A1-KRTAP10-9 1 1 chr21:45488444:+ chr21:44628067:+ . NA TCGA-AR-A1AJ-01A-21R-A12P-07 NLK-LGALS9 6 35 chr17:28043331:+ chr17:27640572:+ INFRAME NA TCGA-AR-A1AJ-01A-21R-A12P-07 RNF170-GOLGA7 2 15 chr8:42870004:- chr8:41497509:+ FRAMESHIFT NA TCGA-AR-A1AJ-01A-21R-A12P-07 ZNRF2-MTURN 2 7 chr7:30323737:+ chr7:30157438:+ FRAMESHIFT NA TCGA-AR-A1AK-01A-21R-A12P-07 PARP16-PHF13 1 1 chr15:65259464:- chr1:6616757:+ INFRAME NA TCGA-AR-A1AN-01A-11R-A12P-07 ELMO2-STAP1 16 64 chr20:46380253:- chr4:67575385:+ INFRAME NA TCGA-AR-A1AN-01A-11R-A12P-07 SFRP1-ARMC5 4 11 chr8:41303461:- chr16:31461922:+ INFRAME NA TCGA-AR-A1AO-01A-11R-A12P-07 STAU1-MRPL4 19 100 chr20:49174195:- chr19:10252397:+ . NA TCGA-AR-A1AO-01A-11R-A12P-07 MET-DYNC1I1 6 7 chr7:116731859:+ chr7:95804721:+ . NA TCGA-AR-A1AO-01A-11R-A12P-07 NPLOC4-NOTUM 7 3 chr17:81636916:- chr17:81954303:- FRAMESHIFT NA TCGA-AR-A1AO-01A-11R-A12P-07 WBP1L-ARL3 5 9 chr10:102744143:+ chr10:102705489:- INFRAME NA TCGA-AR-A1AO-01A-11R-A12P-07 PAXBP1-TP53I3 2 4 chr21:32759080:- chr2:24077761:- INFRAME NA TCGA-AR-A1AO-01A-11R-A12P-07 WDR76-PDIA3 2 1 chr15:43836216:+ chr15:43761424:+ FRAMESHIFT NA TCGA-AR-A1AP-01A-11R-A12P-07 GATA3-TAF3 138 499 chr10:8069598:+ chr10:8013731:+ INFRAME Likely Oncogenic NA TCGA-AR-A1AP-01A-11R-A12P-07 CLNS1A-TRIM49C 5 27 chr11:77637590:- chr11:90032397:+ . NA TCGA-AR-A1AP-01A-11R-A12P-07 TTLL5-TSHR 4 25 chr14:75820161:+ chr14:81062148:+ INFRAME NA TCGA-AR-A1AP-01A-11R-A12P-07 DCTN5-UBFD1 1 19 chr16:23643023:+ chr16:23570480:+ INFRAME NA TCGA-AR-A1AP-01A-11R-A12P-07 ATXN2-CCDC59 2 4 chr12:111552280:- chr12:82308315:- FRAMESHIFT NA TCGA-AR-A1AP-01A-11R-A12P-07 CABLES1-TTC39C 1 7 chr18:23214054:+ chr18:24064140:+ INFRAME NA TCGA-AR-A1AP-01A-11R-A12P-07 RPS6KA5-HOXB2 1 1 chr14:90978306:- chr17:48543747:- INFRAME NA TCGA-AR-A1AQ-01A-11R-A12P-07 PLIN3-ARRDC5 27 73 chr19:4859590:- chr19:4891573:- INFRAME NA TCGA-AR-A1AQ-01A-11R-A12P-07 SBF1-PLXNB2 3 5 chr22:50461523:- chr22:50284665:- FRAMESHIFT NA TCGA-AR-A1AR-01A-31R-A137-07 GPR89A-RNF115 18 64 chr1:145608175:+ chr1:145788966:- INFRAME NA TCGA-AR-A1AR-01A-31R-A137-07 C6orf62-KIAA0319 12 44 chr6:24708777:- chr6:24601208:- . NA TCGA-AR-A1AR-01A-31R-A137-07 FUBP1-SLC44A5 4 8 chr1:77978885:- chr1:75300685:- FRAMESHIFT Likely Oncogenic NA TCGA-AR-A1AR-01A-31R-A137-07 C2CD5-PLCZ1 1 12 chr12:22482557:- chr12:18737509:- . NA TCGA-AR-A1AR-01A-31R-A137-07 PLCZ1-PTHLH 3 2 chr12:18694910:- chr12:27958568:- INFRAME NA TCGA-AR-A1AR-01A-31R-A137-07 KAT6A-ADAM2 2 4 chr8:41955296:- chr8:39837212:- FRAMESHIFT NA TCGA-AR-A1AU-01A-11R-A12P-07 ATG5-TMEM200A 4 25 chr6:106325526:- chr6:130440407:+ . NA TCGA-AR-A1AU-01A-11R-A12P-07 CHD7-ASPH 5 14 chr8:60743097:+ chr8:61684188:- FRAMESHIFT NA TCGA-AR-A1AU-01A-11R-A12P-07 SPAG17-PCF11 4 11 chr1:118185071:- chr11:83161327:+ INFRAME NA TCGA-AR-A1AU-01A-11R-A12P-07 TASP1-HLCS 3 10 chr20:13559008:- chr21:36962170:- INFRAME NA TCGA-AR-A1AU-01A-11R-A12P-07 FOXO3-CHD7 2 4 chr6:108561829:+ chr8:60741259:+ . NA TCGA-AR-A1AW-01A-21R-A12P-07 NSMCE2-DCLRE1C 5 41 chr8:125102487:+ chr10:14899312:- INFRAME NA TCGA-AR-A1AW-01A-21R-A12P-07 KAT14-OVOL2 1 3 chr20:18162945:+ chr20:17996752:- . NA TCGA-AR-A1AW-01A-21R-A12P-07 NMD3-CASD1 1 2 chr3:161247330:+ chr7:94517560:+ FRAMESHIFT NA TCGA-AR-A1AX-01A-11R-A12P-07 HOOK3-GPAT4 3 9 chr8:42925629:+ chr8:41609416:+ INFRAME NA TCGA-AR-A1AY-01A-21R-A12P-07 KDM2A-RPS6KB2 55 239 chr11:67121358:+ chr11:67433340:+ INFRAME NA TCGA-AR-A1AY-01A-21R-A12P-07 MBD2-DOCK2 46 201 chr18:54188874:- chr5:170075947:+ INFRAME NA TCGA-AR-A1AY-01A-21R-A12P-07 DDX39B-PRPH2 21 50 chr6:31538763:- chr6:42704611:- FRAMESHIFT NA TCGA-AR-A1AY-01A-21R-A12P-07 RECQL4-CPSF1 5 30 chr8:144514022:- chr8:144398214:- . NA TCGA-AR-A1AY-01A-21R-A12P-07 STX5-SLC22A6 1 12 chr11:62824166:- chr11:62936486:- . NA TCGA-AR-A24H-01A-11R-A169-07 PCF11-SPON1 33 120 chr11:83157631:+ chr11:14243332:+ INFRAME NA TCGA-AR-A24H-01A-11R-A169-07 ASXL2-HSPH1 6 20 chr2:25878166:- chr13:31158863:- FRAMESHIFT Likely Oncogenic NA TCGA-AR-A24H-01A-11R-A169-07 ZNF137P-TES 8 10 chr19:52592228:+ chr7:116249020:+ . NA TCGA-AR-A24H-01A-11R-A169-07 MCFD2-SRBD1 3 25 chr2:46907810:- chr2:45419894:- INFRAME NA TCGA-AR-A24H-01A-11R-A169-07 TES-ZNF137P 1 12 chr7:116234619:+ chr19:52595617:+ . NA TCGA-AR-A24K-01A-11R-A169-07 TOX3-ITFG1 5 32 chr16:52445994:- chr16:47162664:- FRAMESHIFT NA TCGA-AR-A24K-01A-11R-A169-07 PLEKHA7-SMPD1 6 9 chr11:17013989:- chr11:6393216:+ INFRAME NA TCGA-AR-A24K-01A-11R-A169-07 CLPB-MTUS2 4 13 chr11:72358880:- chr13:29100773:+ INFRAME NA TCGA-AR-A24K-01A-11R-A169-07 B3GLCT-STK33 2 10 chr13:31215100:+ chr11:8475066:- . NA TCGA-AR-A24L-01A-11R-A169-07 SLC16A9-ADK 61 183 chr10:59709479:- chr10:74708321:+ . NA TCGA-AR-A24L-01A-11R-A169-07 ARAP1-INTS5 17 25 chr11:72752328:- chr11:62649999:- . NA TCGA-AR-A24L-01A-11R-A169-07 LPIN2-SLC39A6 5 2 chr18:3013087:- chr18:36127016:- . NA TCGA-AR-A24L-01A-11R-A169-07 EIF2B3-HYI 2 12 chr1:44926628:- chr1:43452319:- INFRAME NA TCGA-AR-A24L-01A-11R-A169-07 MCU-CHCHD1 3 8 chr10:72834428:+ chr10:73783074:+ INFRAME NA TCGA-AR-A24L-01A-11R-A169-07 PARD6G-SLC14A2 2 10 chr18:80202710:- chr18:45483233:+ . NA TCGA-AR-A24L-01A-11R-A169-07 LIN52-BBOF1 2 7 chr14:74101238:+ chr14:74055584:+ FRAMESHIFT NA TCGA-AR-A24L-01A-11R-A169-07 NCOR2-RABGAP1 1 5 chr12:124437930:- chr9:123065348:+ INFRAME NA TCGA-AR-A24L-01A-11R-A169-07 ADK-KAT6B 1 1 chr10:74224591:+ chr10:74838683:+ . NA TCGA-AR-A24M-01A-11R-A169-07 APP-TBK1 1 6 chr21:26170564:- chr12:64455840:+ . NA TCGA-AR-A24O-01A-11R-A169-07 IQCB1-ILDR1 1 4 chr3:121790073:- chr3:121988408:- FRAMESHIFT NA TCGA-AR-A24O-01A-11R-A169-07 TBCD-SLC9A3R1 1 4 chr17:82889697:+ chr17:74762012:+ INFRAME NA TCGA-AR-A24O-01A-11R-A169-07 CCM2-PPIA 1 1 chr7:45038426:+ chr7:44799247:+ INFRAME NA TCGA-AR-A24Q-01A-12R-A169-07 RANBP17-SPDL1 6 26 chr5:170881896:+ chr5:169588394:+ . NA TCGA-AR-A24Q-01A-12R-A169-07 SLC25A22-CHID1 7 18 chr11:794458:- chr11:874910:- . NA TCGA-AR-A24Q-01A-12R-A169-07 SOX6-GALNT18 7 12 chr11:16318446:- chr11:11379264:- INFRAME NA TCGA-AR-A24Q-01A-12R-A169-07 YWHAE-DDX11L16 6 11 chr17:1400047:- chrX:156027444:- . NA TCGA-AR-A24Q-01A-12R-A169-07 GNAI3-CASQ2 3 16 chr1:109548838:+ chr1:115744912:- FRAMESHIFT NA TCGA-AR-A24Q-01A-12R-A169-07 UVRAG-RAD51B 2 14 chr11:76116015:+ chr14:68594485:+ FRAMESHIFT NA TCGA-AR-A24Q-01A-12R-A169-07 C11orf80-FAM161B 3 2 chr11:66759096:+ chr14:73942715:- INFRAME NA TCGA-AR-A24Q-01A-12R-A169-07 TMEM170A-CHST6 1 3 chr16:75464468:- chr16:75479844:- . NA TCGA-AR-A24Q-01A-12R-A169-07 ZNF462-VEGFA 1 3 chr9:106863355:+ chr6:43774341:+ . NA TCGA-AR-A24Q-01A-12R-A169-07 RAD51B-UVRAG 1 2 chr14:68468250:+ chr11:76140711:+ FRAMESHIFT NA TCGA-AR-A24Q-01A-12R-A169-07 LMBR1-EPHA1 1000 1000 chr7:156796390:- chr7:143401606:- . NA TCGA-AR-A24R-01A-11R-A169-07 VMP1-C17orf64 30 248 chr17:59773885:+ chr17:60425783:+ INFRAME NA TCGA-AR-A24R-01A-11R-A169-07 SSH3-CABP2 36 67 chr11:67309543:+ chr11:67524439:- . NA TCGA-AR-A24R-01A-11R-A169-07 SHANK2-KDM2A 24 42 chr11:71056481:- chr11:67180079:+ INFRAME NA TCGA-AR-A24R-01A-11R-A169-07 AURKA-PCK1 9 26 chr20:56388156:- chr20:57561372:+ . NA TCGA-AR-A24R-01A-11R-A169-07 FOXK2-ARFGAP1 3 25 chr17:82603675:+ chr20:63281291:+ . NA TCGA-AR-A24R-01A-11R-A169-07 PDS5B-UBR2 2 0 chr13:32586593:+ chr6:42691032:+ . NA TCGA-AR-A24R-01A-11R-A169-07 GALNT7-SAP30 1 2 chr4:173168961:+ chr4:173373390:+ INFRAME NA TCGA-AR-A24S-01A-11R-A169-07 USP1-SGIP1 23 46 chr1:62448666:+ chr1:66625847:+ FRAMESHIFT NA TCGA-AR-A24S-01A-11R-A169-07 ZNF431-WIZ 7 37 chr19:21143643:+ chr19:15430089:- FRAMESHIFT NA TCGA-AR-A24S-01A-11R-A169-07 IPO7-OR7E14P 7 6 chr11:9384847:+ chr11:17052032:+ . NA TCGA-AR-A24S-01A-11R-A169-07 SMARCA4-RASAL3 3 6 chr19:11013112:+ chr19:15461296:- FRAMESHIFT Likely Oncogenic NA TCGA-AR-A24U-01A-11R-A169-07 CACNA1G-PRAC2 1 59 chr17:50578564:+ chr17:48724328:+ FRAMESHIFT NA TCGA-AR-A24U-01A-11R-A169-07 CACNA1G-MED24 4 18 chr17:50578564:+ chr17:40026331:- INFRAME NA TCGA-AR-A24U-01A-11R-A169-07 SKAP1-IKZF3 2 26 chr17:48345905:- chr17:39766493:- INFRAME NA TCGA-AR-A24U-01A-11R-A169-07 ERAP2-FAM81B 4 2 chr5:96876527:+ chr5:95436800:+ . NA TCGA-AR-A24U-01A-11R-A169-07 CAST-MCTP1 2 8 chr5:96737947:+ chr5:94714886:- INFRAME NA TCGA-AR-A24U-01A-11R-A169-07 CDK12-IKZF3 2 3 chr17:39463117:+ chr17:39832151:- FRAMESHIFT Likely Oncogenic NA TCGA-AR-A24U-01A-11R-A169-07 TEX2-TOB1 1 4 chr17:64263168:- chr17:50864163:- . NA TCGA-AR-A24U-01A-11R-A169-07 ARSG-STAT5B 1 2 chr17:68401450:+ chr17:42202808:- INFRAME NA TCGA-AR-A24V-01A-21R-A169-07 EEF1DP3-TEX26 14 123 chr13:31946181:+ chr13:30966222:+ . NA TCGA-AR-A24V-01A-21R-A169-07 PPFIA1-C11orf24 16 65 chr11:70272436:+ chr11:68262918:- FRAMESHIFT NA TCGA-AR-A24V-01A-21R-A169-07 FSTL4-SLIT3 2 11 chr5:133201933:- chr5:168687116:- INFRAME NA TCGA-AR-A24W-01A-11R-A169-07 HPRT1-CTPS2 252 645 chrX:134475364:+ chrX:16639243:- INFRAME NA TCGA-AR-A24X-01A-11R-A169-07 PDS5B-UBR2 2 3 chr13:32586593:+ chr6:42691032:+ . NA TCGA-AR-A24Z-01A-11R-A169-07 HOOK1-RAB6A 23 36 chr1:59815180:+ chr11:73679720:- INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 GABPB2-OR10J1 16 38 chr1:151098002:+ chr1:159439776:+ FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 SORBS2-AIF1 16 31 chr4:185684754:- chr6:31616344:+ INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 LAMC1-SUSD4 13 19 chr1:183136450:+ chr1:223281083:- . NA TCGA-AR-A24Z-01A-11R-A169-07 PACSIN2-ZNF823 7 22 chr22:42912021:- chr19:11725327:- INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 DSTYK-NAV1 2 29 chr1:205211271:- chr1:201780421:+ FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 CENPF-SUSD4 1 32 chr1:214603321:+ chr1:223268675:- . NA TCGA-AR-A24Z-01A-11R-A169-07 RARS2-SMAP1 4 9 chr6:87589922:- chr6:70798657:+ INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 CDK19-ZFAND3 2 16 chr6:110815009:- chr6:38152235:+ FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 FOXJ3-ZFYVE9 2 12 chr1:42265115:- chr1:52216369:+ . NA TCGA-AR-A24Z-01A-11R-A169-07 PEX3-PHACTR2 1 16 chr6:143468165:+ chr6:143765261:+ INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 PDE4B-MOB3C 3 6 chr1:66266087:+ chr1:46613371:- INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 CENPF-LAMC1 2 9 chr1:214603321:+ chr1:183136386:+ . NA TCGA-AR-A24Z-01A-11R-A169-07 CBL-CLNS1A 2 7 chr11:119278713:+ chr11:77530014:- . Likely Oncogenic NA TCGA-AR-A24Z-01A-11R-A169-07 SHANK2-HMGN3 2 6 chr11:70659828:- chr6:79215022:- INFRAME NA TCGA-AR-A24Z-01A-11R-A169-07 PLXNA2-DUSP10 2 5 chr1:208210280:- chr1:221706466:- FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 LRRC1-DAAM2 2 4 chr6:53842227:+ chr6:39856247:+ . NA TCGA-AR-A24Z-01A-11R-A169-07 FAM168A-PTCRA 1 6 chr11:73597923:- chr6:42923145:+ . NA TCGA-AR-A24Z-01A-11R-A169-07 ORC3-RIMS1 2 2 chr6:87612248:+ chr6:72390598:+ FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 TNPO2-DAB1 1 6 chr19:12723249:- chr1:57884162:- . NA TCGA-AR-A24Z-01A-11R-A169-07 MEA1-LRRC1 1 5 chr6:43012926:- chr6:53896498:+ FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 SLC44A5-PTGFR 1 5 chr1:75211468:- chr1:78536406:+ FRAMESHIFT NA TCGA-AR-A24Z-01A-11R-A169-07 ARCN1-MANEA 1 4 chr11:118572550:+ chr6:95586402:+ . NA TCGA-AR-A24Z-01A-11R-A169-07 IQGAP2-ACOT12 1 2 chr5:76570657:+ chr5:81330940:- FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 FUT10-GAB2 13 72 chr8:33453216:- chr11:78250400:- INFRAME NA TCGA-AR-A250-01A-31R-A169-07 PDK2-CDK12 22 35 chr17:50105442:+ chr17:39470879:+ INFRAME Likely Oncogenic NA TCGA-AR-A250-01A-31R-A169-07 SMURF2-NGFR 15 17 chr17:64661829:- chr17:49502063:+ FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 CEP95-RBM11 8 34 chr17:64507116:+ chr21:14221097:+ INFRAME NA TCGA-AR-A250-01A-31R-A169-07 SMURF2-IKZF3 14 10 chr17:64661829:- chr17:39792933:- INFRAME NA TCGA-AR-A250-01A-31R-A169-07 UBL3-PAN3 11 9 chr13:29849512:- chr13:28174272:+ FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 PITPNC1-MBTD1 7 12 chr17:67578257:+ chr17:51225209:- . NA TCGA-AR-A250-01A-31R-A169-07 DDX5-ADAM18 2 28 chr17:64502010:- chr8:39638465:+ FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 BCAS3-KAT7 3 12 chr17:61084564:+ chr17:49815803:+ FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 RAB11FIP4-RAD51C 5 4 chr17:31488272:+ chr17:58694931:+ FRAMESHIFT Likely Oncogenic NA TCGA-AR-A250-01A-31R-A169-07 COL1A1-AEBP1 1 16 chr17:50196484:- chr7:44112142:+ INFRAME NA TCGA-AR-A250-01A-31R-A169-07 IKZF3-BCAS3 1 15 chr17:39777651:- chr17:60868576:+ FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 SUPT6H-TJP1 2 7 chr17:28686789:+ chr15:29956364:- FRAMESHIFT NA TCGA-AR-A250-01A-31R-A169-07 IFT88-WASF3 1 4 chr13:20583019:+ chr13:26642261:+ . NA TCGA-AR-A251-01A-12R-A169-07 STAG1-ISY1 110 343 chr3:136752195:- chr3:129140485:- . NA TCGA-AR-A251-01A-12R-A169-07 MAP3K4-FNDC1 26 50 chr6:161049979:+ chr6:159197431:+ FRAMESHIFT NA TCGA-AR-A251-01A-12R-A169-07 PRPSAP1-ST6GALNAC2 11 31 chr17:76348529:- chr17:76578816:- FRAMESHIFT NA TCGA-AR-A251-01A-12R-A169-07 ELK3-AMDHD1 13 22 chr12:96223773:+ chr12:95952717:+ FRAMESHIFT NA TCGA-AR-A251-01A-12R-A169-07 FNBP1L-NCR2 8 42 chr1:93448305:+ chr6:41335831:+ . NA TCGA-AR-A251-01A-12R-A169-07 NAV2-PACSIN3 7 20 chr11:20083179:+ chr11:47183069:- . NA TCGA-AR-A251-01A-12R-A169-07 ZNF251-FAHD2B 5 14 chr8:144753683:- chr2:97091712:- . NA TCGA-AR-A251-01A-12R-A169-07 PRUNE2-GNAQ 4 9 chr9:76823632:- chr9:77797648:- FRAMESHIFT NA TCGA-AR-A251-01A-12R-A169-07 LONP1-SAFB2 2 11 chr19:5705772:- chr19:5600260:- INFRAME NA TCGA-AR-A251-01A-12R-A169-07 ZNF644-STARD3NL 1 5 chr1:90982310:- chr7:38207447:+ . NA TCGA-AR-A251-01A-12R-A169-07 PITPNM3-SLC38A9 1 3 chr17:6525356:- chr5:55697212:- . NA TCGA-AR-A252-01A-11R-A169-07 MED13-TANC2 5 6 chr17:61965006:- chr17:63073943:+ FRAMESHIFT NA TCGA-AR-A252-01A-11R-A169-07 RTFDC1-PCNT 3 8 chr20:56474771:+ chr21:46398014:+ INFRAME NA TCGA-AR-A254-01A-21R-A169-07 ERBB2-SLC29A3 320 1029 chr17:39727003:+ chr10:71361954:+ FRAMESHIFT NA TCGA-AR-A254-01A-21R-A169-07 RARA-MSL1 37 243 chr17:40331396:+ chr17:40126183:+ FRAMESHIFT NA TCGA-AR-A254-01A-21R-A169-07 FBXL20-SOCS7 53 135 chr17:39402173:- chr17:38395309:+ FRAMESHIFT NA TCGA-AR-A254-01A-21R-A169-07 OPRL1-PRPF6 30 110 chr20:64080352:+ chr20:64010200:+ . NA TCGA-AR-A254-01A-21R-A169-07 GTF2B-BPI 2 209 chr1:88891483:- chr20:38334430:+ FRAMESHIFT NA TCGA-AR-A254-01A-21R-A169-07 FAM217B-PRPF6 14 72 chr20:59938112:+ chr20:64025939:+ . NA TCGA-AR-A254-01A-21R-A169-07 FBXL20-NOTCH2 5 10 chr17:39402173:- chr1:119922778:- FRAMESHIFT NA TCGA-AR-A254-01A-21R-A169-07 FAM149B1-USP6NL 5 1 chr10:73208786:+ chr10:11527567:- FRAMESHIFT NA TCGA-AR-A254-01A-21R-A169-07 CDC6-MSL1 3 7 chr17:40294056:+ chr17:40126183:+ FRAMESHIFT NA TCGA-AR-A255-01A-11R-A169-07 SMURF2P1-ASIC2 11 29 chr17:30610942:+ chr17:33112067:- . NA TCGA-AR-A255-01A-11R-A169-07 RABGAP1L-MGST3 6 21 chr1:174159657:+ chr1:165649841:+ . NA TCGA-AR-A255-01A-11R-A169-07 CHM-ABCB7 1 11 chrX:86027491:- chrX:75114831:- FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 DDB1-TMEM258 112 158 chr11:61308983:- chr11:61789235:- . NA TCGA-AR-A256-01A-11R-A169-07 ST14-ST7 26 72 chr11:130160060:+ chr7:117099762:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 CHMP4B-CBFA2T2 31 42 chr20:33811658:+ chr20:33644347:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 CCNY-DENND1A 9 58 chr10:35337207:+ chr9:123757822:- FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 EXOC4-SLC25A13 10 54 chr7:133375002:+ chr7:96146696:- INFRAME NA TCGA-AR-A256-01A-11R-A169-07 C2orf42-TGFA 7 59 chr2:70248405:- chr2:70465736:- . NA TCGA-AR-A256-01A-11R-A169-07 TIA1-TGFA 7 59 chr2:70248405:- chr2:70465736:- FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 CAMK2G-AGAP5 10 17 chr10:73872989:- chr10:73682794:- FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 SMARCA4-ICAM1 7 23 chr19:10961174:+ chr19:10274765:+ . Likely Oncogenic NA TCGA-AR-A256-01A-11R-A169-07 WWP2-TSEN54 5 31 chr16:69787080:+ chr17:75521409:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 S100A4-S100A3 4 14 chr1:153544654:- chr1:153548490:- . NA TCGA-AR-A256-01A-11R-A169-07 GIGYF2-CHRND 3 16 chr2:232749082:+ chr2:232533931:+ INFRAME NA TCGA-AR-A256-01A-11R-A169-07 PGGT1B-KIAA0825 2 15 chr5:115253133:- chr5:94154124:- . NA TCGA-AR-A256-01A-11R-A169-07 PATJ-HSD52 3 9 chr1:61927829:+ chr1:59133330:- . NA TCGA-AR-A256-01A-11R-A169-07 ZDHHC14-SYNJ2 3 5 chr6:157653627:+ chr6:158088660:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 SPOPL-SSFA2 3 3 chr2:138502119:+ chr2:181892032:+ . NA TCGA-AR-A256-01A-11R-A169-07 STK17B-HECW2 3 3 chr2:196143560:- chr2:196343764:- INFRAME NA TCGA-AR-A256-01A-11R-A169-07 WRAP53-SLC44A2 1 11 chr17:7689322:+ chr19:10636323:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 EPS15L1-RABGAP1 2 6 chr19:16361779:- chr9:123015543:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 SRPK2-PUS7 1 9 chr7:105203628:- chr7:105508544:- . NA TCGA-AR-A256-01A-11R-A169-07 ILF3-TP53 2 4 chr19:10654487:+ chr17:7676622:- . Likely Oncogenic NA TCGA-AR-A256-01A-11R-A169-07 CA3-MYBL1 2 3 chr8:85444126:+ chr8:66566992:- INFRAME NA TCGA-AR-A256-01A-11R-A169-07 HK1-SUPV3L1 2 3 chr10:69343989:+ chr10:69207793:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 WDPCP-VPS54 1 6 chr2:63492856:- chr2:63949163:- FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 C16orf62-TMC5 1 4 chr16:19591874:+ chr16:19497121:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 VCL-PLAU 1 3 chr10:73998375:+ chr10:73914776:+ FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 RNGTT-RRAGD 1 2 chr6:88678353:- chr6:89387590:- FRAMESHIFT NA TCGA-AR-A256-01A-11R-A169-07 ITSN2-DNAJC27 1 1 chr2:24212650:- chr2:24967293:- INFRAME NA TCGA-AR-A2LK-01A-11R-A180-07 IKBKB-FADD 11 56 chr8:42309025:+ chr11:70206133:+ FRAMESHIFT NA TCGA-AR-A2LK-01A-11R-A180-07 SRGAP2-ELF3 1 8 chr1:206303473:+ chr1:202012640:+ FRAMESHIFT Likely Oncogenic NA TCGA-AR-A2LM-01A-11R-A180-07 RECQL-PEMT 6 3 chr12:21499555:- chr17:17577027:- FRAMESHIFT NA TCGA-AR-A2LM-01A-11R-A180-07 ST8SIA1-LMNTD1 2 4 chr12:22249006:- chr12:25526955:- INFRAME NA TCGA-AR-A2LM-01A-11R-A180-07 RSRC2-LIN7A 1 2 chr12:122526848:- chr12:80797726:- . NA TCGA-AR-A2LN-01A-21R-A18M-07 ANKS1B-CCER1 8 39 chr12:99655067:- chr12:90905864:- . NA TCGA-AR-A2LN-01A-21R-A18M-07 YAF2-SYT1 3 2 chr12:42237599:- chr12:78864998:+ . NA TCGA-AR-A5QN-01A-12R-A28M-07 COPS3-TEKT3 2 20 chr17:17260301:- chr17:15314230:- FRAMESHIFT NA TCGA-AR-A5QP-01A-11R-A28M-07 ADPRHL2-SHPK 3 14 chr1:36089115:+ chr17:3630346:- FRAMESHIFT NA TCGA-AR-A5QQ-01A-11R-A28M-07 ZNF703-EIF4EBP1 55 301 chr8:37696222:+ chr8:38057081:+ FRAMESHIFT NA TCGA-AR-A5QQ-01A-11R-A28M-07 HDDC2-FAM47E 6 41 chr6:125292841:- chr4:76263704:+ INFRAME NA TCGA-AR-A5QQ-01A-11R-A28M-07 SPIDR-RP1 1 8 chr8:47294030:+ chr8:54754803:+ INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 TUT1-BSCL2 65 353 chr11:62589031:- chr11:62694711:- INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 SCARB1-DHX37 9 32 chr12:124863595:- chr12:124977490:- INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 ELF2-NR1I3 7 20 chr4:139084133:- chr1:161238183:- . NA TCGA-B6-A0I1-01A-11R-A21T-07 ELF5-CAT 6 18 chr11:34493479:- chr11:34464105:+ INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 FRMD8-MAST1 3 22 chr11:65397020:+ chr19:12858362:+ FRAMESHIFT NA TCGA-B6-A0I1-01A-11R-A21T-07 TIMM50-IFNL1 3 14 chr19:39483156:+ chr19:39296805:+ INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 C11orf80-KDM2A 2 16 chr11:66816199:+ chr11:67248281:+ FRAMESHIFT NA TCGA-B6-A0I1-01A-11R-A21T-07 PVT1-NABP2 3 12 chr8:127794734:+ chr12:56225373:+ . NA TCGA-B6-A0I1-01A-11R-A21T-07 PVT1-CS 3 7 chr8:127890998:+ chr12:56276195:- . NA TCGA-B6-A0I1-01A-11R-A21T-07 IFFO2-UBR4 3 3 chr1:18955668:- chr1:19084698:- INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 MGST3-SLAMF7 2 7 chr1:165631293:+ chr1:160748194:+ . NA TCGA-B6-A0I1-01A-11R-A21T-07 PRRG2-CCDC155 2 7 chr19:49583717:+ chr19:49408967:+ INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 ATP6V0A1-ATF6 1 10 chr17:42461011:+ chr1:161863198:+ FRAMESHIFT NA TCGA-B6-A0I1-01A-11R-A21T-07 GMDS-METTL24 2 5 chr6:1930103:- chr6:110322872:- INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 EFCAB13-MYL4 1 5 chr17:47414919:+ chr17:47209389:+ . NA TCGA-B6-A0I1-01A-11R-A21T-07 WRN-ADAM9 1 5 chr8:31125000:+ chr8:39013965:+ INFRAME NA TCGA-B6-A0I1-01A-11R-A21T-07 CHMP4B-CBFA2T2 1 3 chr20:33811658:+ chr20:33623115:+ FRAMESHIFT NA TCGA-B6-A0I1-01A-11R-A21T-07 XYLB-OXSR1 1 3 chr3:38348632:+ chr3:38242743:+ FRAMESHIFT NA TCGA-B6-A0I2-01A-11R-A034-07 MRPL11-ST8SIA1 8 26 chr11:66437104:- chr12:22249098:- INFRAME NA TCGA-B6-A0I2-01A-11R-A034-07 ZNF549-CTU1 3 3 chr19:57535270:+ chr19:51104590:- . NA TCGA-B6-A0I2-01A-11R-A034-07 PPP1R12B-FAM134A 1 8 chr1:202349142:+ chr2:219182013:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 ORMDL3-ZPBP2 62 261 chr17:39924030:- chr17:39870694:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 SNX13-STAP2 58 186 chr7:17940284:- chr19:4334044:- INFRAME NA TCGA-B6-A0I9-01A-11R-A034-07 TRADD-SLC12A1 84 55 chr16:67159838:- chr15:48255811:+ . NA TCGA-B6-A0I9-01A-11R-A034-07 ASTN2-PNMT 17 147 chr9:117291326:- chr17:39669629:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 NARS2-NDUFC2 16 55 chr11:78559539:- chr11:78073141:- FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 FSD1L-ADAMTS13 7 35 chr9:105448235:+ chr9:133448599:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 RPS6KA5-C14orf132 9 12 chr14:91060332:- chr14:96086511:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 DDIAS-BDNF-AS 4 23 chr11:82914851:+ chr11:27584269:+ . NA TCGA-B6-A0I9-01A-11R-A034-07 C2orf48-UQCC1 5 16 chr2:10141954:+ chr20:35347272:- . NA TCGA-B6-A0I9-01A-11R-A034-07 FCHSD2-NBPF4 8 3 chr11:73140031:- chr1:108234411:- INFRAME NA TCGA-B6-A0I9-01A-11R-A034-07 PMEPA1-FAM83C 5 15 chr20:57709474:- chr20:35288958:- FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 NIPSNAP3A-TMEFF1 3 15 chr9:104747852:+ chr9:100547744:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 PPFIA1-ISPD 4 11 chr11:70355811:+ chr7:16301466:- FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 RORA-ARNT2 4 8 chr15:61229053:- chr15:80593600:+ FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 TRIM25-MSI2 2 15 chr17:56895343:- chr17:57596868:+ INFRAME NA TCGA-B6-A0I9-01A-11R-A034-07 TRIP11-NUBPL 1 18 chr14:91972717:- chr14:31826629:+ INFRAME NA TCGA-B6-A0I9-01A-11R-A034-07 MED1-ARHGAP23 2 12 chr17:39447798:- chr17:38458102:+ INFRAME NA TCGA-B6-A0I9-01A-11R-A034-07 MARK3-MIA2 1 10 chr14:103386080:+ chr14:39246911:+ INFRAME NA TCGA-B6-A0I9-01A-11R-A034-07 VPS35-TMEM189 1 8 chr16:46671705:- chr20:50130947:- FRAMESHIFT NA TCGA-B6-A0I9-01A-11R-A034-07 ABCB7-ACSS2 1 3 chrX:75070365:- chr20:34913096:+ FRAMESHIFT NA TCGA-B6-A0IA-01A-11R-A034-07 CREBBP-NUBP1 55 211 chr16:3769174:- chr16:10752610:+ INFRAME Likely Oncogenic NA TCGA-B6-A0IA-01A-11R-A034-07 NUP153-GCNT2 7 34 chr6:17688396:- chr6:10509087:+ . NA TCGA-B6-A0IC-01A-11R-A034-07 SEMA3C-AUTS2 5 5 chr7:80789306:- chr7:70435752:+ FRAMESHIFT NA TCGA-B6-A0IE-01A-11R-A034-07 CLTB-SIL1 3 14 chr5:176410257:- chr5:138951884:- FRAMESHIFT NA TCGA-B6-A0IG-01A-11R-A034-07 FAM111B-MS4A5 59 215 chr11:59109706:+ chr11:60430796:+ INFRAME NA TCGA-B6-A0IG-01A-11R-A034-07 PRRG4-RAPGEFL1 13 83 chr11:32830632:+ chr17:40188866:+ FRAMESHIFT NA TCGA-B6-A0IG-01A-11R-A034-07 MED24-CEP95 6 58 chr17:40053298:- chr17:64521402:+ INFRAME NA TCGA-B6-A0IG-01A-11R-A034-07 ERC1-PIK3C2G 13 25 chr12:1190052:+ chr12:18488449:+ INFRAME NA TCGA-B6-A0IG-01A-11R-A034-07 SCN8A-SRGAP1 4 16 chr12:51590673:+ chr12:63983947:+ . NA TCGA-B6-A0IG-01A-11R-A034-07 EZH1-TOP2A 2 7 chr17:42702877:- chr17:40404883:- FRAMESHIFT NA TCGA-B6-A0IH-01A-11R-A115-07 DNAJC1-NDUFAF6 5 22 chr10:21882282:- chr8:95116270:+ . NA TCGA-B6-A0IH-01A-11R-A115-07 SON-C10orf11 2 30 chr21:33559775:+ chr10:76324401:+ INFRAME NA TCGA-B6-A0IH-01A-11R-A115-07 DNAJC1-PLEKHF2 4 7 chr10:21882282:- chr8:95154031:+ . NA TCGA-B6-A0IH-01A-11R-A115-07 AFF3-TMEM182 1 4 chr2:99593195:- chr2:102762587:+ INFRAME NA TCGA-B6-A0IJ-01A-11R-A034-07 MYH9-NFYC 109 303 chr22:36387807:- chr1:40738836:+ . NA TCGA-B6-A0IJ-01A-11R-A034-07 GGA1-TRIOBP 32 39 chr22:37608903:+ chr22:37765670:+ FRAMESHIFT NA TCGA-B6-A0IJ-01A-11R-A034-07 TRIB1-NSMCE2 11 22 chr8:125431262:+ chr8:125357219:+ FRAMESHIFT NA TCGA-B6-A0IJ-01A-11R-A034-07 THTPA-MMP14 9 26 chr14:23560108:+ chr14:22844380:+ . NA TCGA-B6-A0IJ-01A-11R-A034-07 ZNF148-FHAD1 4 12 chr3:125288103:- chr1:15362642:+ FRAMESHIFT NA TCGA-B6-A0IJ-01A-11R-A034-07 GLIPR2-RECK 2 16 chr9:36150949:+ chr9:36116985:+ FRAMESHIFT NA TCGA-B6-A0IJ-01A-11R-A034-07 LTN1-RWDD2B 2 8 chr21:28992764:- chr21:29008621:- FRAMESHIFT NA TCGA-B6-A0IJ-01A-11R-A034-07 MGAT3-WWC1 3 1 chr22:39457557:+ chr5:168428033:+ . NA TCGA-B6-A0IK-01A-12R-A056-07 UVRAG-DGAT2 19 16 chr11:75815524:+ chr11:75796328:+ INFRAME NA TCGA-B6-A0IK-01A-12R-A056-07 BCAS3-TBC1D3P1 2 5 chr17:60808076:+ chr17:60011664:- . NA TCGA-B6-A0IM-01A-11R-A034-07 RNF216-ST14 16 81 chr7:5711761:- chr11:130188114:+ INFRAME NA TCGA-B6-A0IM-01A-11R-A034-07 EDC3-SNX29 21 40 chr15:74695880:- chr16:12199601:+ . NA TCGA-B6-A0IM-01A-11R-A034-07 MYO9A-CRAMP1 2 25 chr15:72045724:- chr16:1632212:+ INFRAME NA TCGA-B6-A0IN-01A-11R-A034-07 RARA-SKAP1 59 365 chr17:40331396:+ chr17:48137337:- FRAMESHIFT NA TCGA-B6-A0IN-01A-11R-A034-07 APPBP2-DCAF7 4 14 chr17:60525794:- chr17:63578470:+ INFRAME NA TCGA-B6-A0IN-01A-11R-A034-07 CUL1-GIMAP5 3 11 chr7:148787120:+ chr7:150740879:+ . NA TCGA-B6-A0IN-01A-11R-A034-07 PITPNB-SBF1 2 10 chr22:27910964:- chr22:50447453:- FRAMESHIFT NA TCGA-B6-A0IN-01A-11R-A034-07 BCAS3-APPBP2 3 4 chr17:60990235:+ chr17:60500487:- FRAMESHIFT NA TCGA-B6-A0IN-01A-11R-A034-07 SHANK3-LARGE1 2 6 chr22:50684651:+ chr22:33856802:- . NA TCGA-B6-A0IN-01A-11R-A034-07 KDM7A-SND1 2 2 chr7:140094056:- chr7:127990947:+ FRAMESHIFT NA TCGA-B6-A0IO-01A-11R-A034-07 PKM-MCTP2 4 29 chr15:72217409:- chr15:94398961:+ INFRAME NA TCGA-B6-A0IO-01A-11R-A034-07 BBS4-TTC23 6 18 chr15:72731726:+ chr15:99221864:- FRAMESHIFT NA TCGA-B6-A0IO-01A-11R-A034-07 PDE8A-CIB1 5 14 chr15:84982348:+ chr15:90233703:- INFRAME NA TCGA-B6-A0IO-01A-11R-A034-07 PRPF39-PSMA6 2 3 chr14:45084249:+ chr14:35307994:+ . NA TCGA-B6-A0IO-01A-11R-A034-07 COMMD10-DGKI 1 5 chr5:116134178:+ chr7:137391336:- INFRAME NA TCGA-B6-A0IO-01A-11R-A034-07 RBMS1-XIRP2 1 3 chr2:160493289:- chr2:167210735:+ FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 NCOA4-PARGP1 33 82 chr10:46030526:- chr10:45863114:- . NA TCGA-B6-A0IQ-01A-11R-A034-07 PBX1-CTNNA3 22 50 chr1:164812149:+ chr10:66775524:- FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 UTRN-ECT2L 15 27 chr6:144577288:+ chr6:138900948:+ FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 NFIA-LTV1 3 14 chr1:61277585:+ chr6:143846051:+ FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 PEX7-MED23 1 19 chr6:136898241:+ chr6:131574295:- INFRAME NA TCGA-B6-A0IQ-01A-11R-A034-07 MAP7-ARG1 2 9 chr6:136550342:- chr6:131583060:+ FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 MAP7-CNKSR3 3 4 chr6:136365735:- chr6:154450258:- INFRAME NA TCGA-B6-A0IQ-01A-11R-A034-07 ZNF470-ZNF835 1 8 chr19:56574733:+ chr19:56665245:- . NA TCGA-B6-A0IQ-01A-11R-A034-07 ZNF823-VAV1 2 4 chr19:11738817:- chr19:6820702:+ INFRAME NA TCGA-B6-A0IQ-01A-11R-A034-07 CSAD-ZYG11B 1 5 chr12:53160120:- chr1:52756458:+ FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 SYTL3-AIG1 2 1 chr6:158713878:+ chr6:143187629:+ FRAMESHIFT NA TCGA-B6-A0IQ-01A-11R-A034-07 XPO7-H2AFY2 1 4 chr8:21919788:+ chr10:70090060:+ INFRAME NA TCGA-B6-A0IQ-01A-11R-A034-07 ANXA2-SMG1 1 1 chr15:60354154:- chr16:18872624:- INFRAME NA TCGA-B6-A0RE-01A-11R-A056-07 SGPP2-ALG14 9 34 chr2:222525033:+ chr1:95027260:- INFRAME NA TCGA-B6-A0RE-01A-11R-A056-07 CD9-PBXIP1 13 16 chr12:6200565:+ chr1:154945117:- FRAMESHIFT NA TCGA-B6-A0RE-01A-11R-A056-07 TMEM45B-BARX2 4 5 chr11:129815898:+ chr11:129436751:+ . NA TCGA-B6-A0RG-01A-11R-A056-07 RASGRP1-LRRC4C 3 13 chr15:38559821:- chr11:40140853:- . NA TCGA-B6-A0RG-01A-11R-A056-07 MKL2-FSTL3 1 17 chr16:14140760:+ chr19:681650:+ INFRAME NA TCGA-B6-A0RH-01A-21R-A115-07 ATP2A2-RRP1 38 99 chr12:110343434:+ chr21:43791350:+ INFRAME NA TCGA-B6-A0RH-01A-21R-A115-07 ARID2-TMPRSS2 3 59 chr12:45839496:+ chr21:41530214:- . Likely Oncogenic NA TCGA-B6-A0RH-01A-21R-A115-07 CDK12-JUP 5 4 chr17:39501439:+ chr17:41771862:- . Likely Oncogenic NA TCGA-B6-A0RI-01A-11R-A056-07 LITAF-ABCA17P 36 110 chr16:11586886:- chr16:2361116:+ . NA TCGA-B6-A0RI-01A-11R-A056-07 PPIG-CRIM1 9 62 chr2:169584490:+ chr2:36499219:+ INFRAME NA TCGA-B6-A0RL-01A-11R-A084-07 EPS15L1-ZNF675 10 16 chr19:16413773:- chr19:23574232:- FRAMESHIFT NA TCGA-B6-A0RL-01A-11R-A084-07 TPCN2-RAB11FIP1 2 17 chr11:69063967:+ chr8:37863113:- INFRAME NA TCGA-B6-A0RL-01A-11R-A084-07 CLPB-C2CD3 3 6 chr11:72329707:- chr11:74106493:- INFRAME NA TCGA-B6-A0RL-01A-11R-A084-07 PPME1-AQP11 3 6 chr11:74204445:+ chr11:77609298:+ FRAMESHIFT NA TCGA-B6-A0RL-01A-11R-A084-07 NSD3-RSF1 2 7 chr8:38337305:- chr11:77691238:- FRAMESHIFT NA TCGA-B6-A0RL-01A-11R-A084-07 NYAP2-KCNU1 3 1 chr2:225409101:+ chr8:36905708:+ INFRAME NA TCGA-B6-A0RL-01A-11R-A084-07 PPME1-NSD3 1 5 chr11:74222369:+ chr8:38338607:- FRAMESHIFT NA TCGA-B6-A0RL-01A-11R-A084-07 RICTOR-FGF10 1 2 chr5:39074111:- chr5:44310530:- INFRAME NA TCGA-B6-A0RL-01A-11R-A084-07 ZNF492-FCHO1 1000 1000 chr19:22634421:+ chr19:17786574:+ . NA TCGA-B6-A0RM-01A-11R-A084-07 SPTAN1-AUH 3 19 chr9:128568897:+ chr9:91325404:- FRAMESHIFT NA TCGA-B6-A0RM-01A-11R-A084-07 HEATR3-CHRNB3 2 6 chr16:50066539:+ chr8:42730594:+ FRAMESHIFT NA TCGA-B6-A0RN-01A-12R-A084-07 CDH1-DEXI 45 310 chr16:68808848:+ chr16:10929559:- . Likely Oncogenic NA TCGA-B6-A0RN-01A-12R-A084-07 DEXI-CDH1 3 12 chr16:10933844:- chr16:68810197:+ . Likely Oncogenic NA TCGA-B6-A0RO-01A-22R-A084-07 TUBB2B-PAQR5 16 32 chr6:3231556:- chr15:69379884:+ . NA TCGA-B6-A0RP-01A-21R-A084-07 SERPINA3-CPB1 1 3 chr14:94615084:+ chr3:148845424:+ INFRAME NA TCGA-B6-A0RQ-01A-11R-A115-07 ZNF83-ZNF444 1 1 chr19:52690443:- chr19:56158494:+ . NA TCGA-B6-A0RS-01A-11R-A084-07 PRKAA1-RPL37 97 401 chr5:40798063:- chr5:40834606:- FRAMESHIFT NA TCGA-B6-A0RS-01A-11R-A084-07 SHANK2-ANXA13 49 175 chr11:71224697:- chr8:123712753:- . NA TCGA-B6-A0RS-01A-11R-A084-07 CREB3L2-ATP6V0A4 5 32 chr7:137879290:- chr7:138749317:- . NA TCGA-B6-A0RS-01A-11R-A084-07 XXYLT1-ACAP2 7 10 chr3:195270555:- chr3:195345317:- INFRAME NA TCGA-B6-A0RS-01A-11R-A084-07 SPATA33-DPEP1 3 16 chr16:89658421:+ chr16:89630305:+ . NA TCGA-B6-A0RS-01A-11R-A084-07 UPF2-PPP2R5C 2 11 chr10:11942665:- chr14:101786018:+ INFRAME NA TCGA-B6-A0RS-01A-11R-A084-07 CDKAL1-HSP90AA1 2 8 chr6:20535394:+ chr14:102102085:- . NA TCGA-B6-A0RT-01A-21R-A084-07 ETFB-LIM2 23 110 chr19:51354150:- chr19:51380639:- FRAMESHIFT NA TCGA-B6-A0RT-01A-21R-A084-07 SCAI-PPP6C 7 27 chr9:125142633:- chr9:125149921:- FRAMESHIFT NA TCGA-B6-A0RT-01A-21R-A084-07 PREP-PLN 7 26 chr6:105397853:- chr6:118558825:+ . NA TCGA-B6-A0RT-01A-21R-A084-07 PITPNA-NXN 6 27 chr17:1541566:- chr17:826078:- INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 RNF19A-SLC41A3 7 12 chr8:100336108:- chr3:126012749:- . NA TCGA-B6-A0RT-01A-21R-A084-07 SLC25A23-SLC2A9 8 7 chr19:6456420:- chr4:9771369:- . NA TCGA-B6-A0RT-01A-21R-A084-07 SLTM-UACA 2 28 chr15:58916935:- chr15:70699660:- INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 TEAD1-CAP2 3 24 chr11:12675561:+ chr6:17462996:+ . NA TCGA-B6-A0RT-01A-21R-A084-07 HPN-PPP2R5C 5 15 chr19:35042522:+ chr14:101836169:+ INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 PPP2R5C-SCN1B 1 29 chr14:101810036:+ chr19:35032528:+ INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 NEK9-TMED10 3 18 chr14:75126703:- chr14:75135886:- INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 KLC1-APOPT1 5 7 chr14:103629494:+ chr14:103590181:+ . NA TCGA-B6-A0RT-01A-21R-A084-07 SCCPDH-CNST 4 11 chr1:246727004:+ chr1:246660199:+ INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 PITPNM1-CABP2 1 15 chr11:67499723:- chr11:67520160:- INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 IARS-NOL8 2 4 chr9:92285722:- chr9:92311259:- INFRAME NA TCGA-B6-A0RT-01A-21R-A084-07 IFT74-LDLRAD3 1 4 chr9:26962087:+ chr11:36227085:+ FRAMESHIFT NA TCGA-B6-A0RT-01A-21R-A084-07 RAP1GAP2-SGSM2 1 4 chr17:2998376:+ chr17:2377857:+ INFRAME NA TCGA-B6-A0RU-01A-11R-A084-07 TESMIN-CPT1A 28 42 chr11:68747208:- chr11:68761687:- INFRAME NA TCGA-B6-A0RU-01A-11R-A084-07 DEPDC1B-NPBWR1 4 2 chr5:60686962:- chr8:52939711:+ . NA TCGA-B6-A0RU-01A-11R-A084-07 CHD9-RAD51B 2 8 chr16:53157541:+ chr14:68291884:+ INFRAME NA TCGA-B6-A0RU-01A-11R-A084-07 COL6A2-PRDX2 2 5 chr21:46118676:+ chr19:12801270:- . NA TCGA-B6-A0RU-01A-11R-A084-07 TMEM63A-LPAR1 1 5 chr1:225848492:- chr9:110973558:- . NA TCGA-B6-A0WT-01A-11R-A109-07 QSER1-GAS2 4 13 chr11:32893334:+ chr11:22726292:+ . NA TCGA-B6-A0WV-01A-11R-A109-07 KIF13B-EPN2 13 29 chr8:29245346:- chr17:19281955:+ . NA TCGA-B6-A0WV-01A-11R-A109-07 MED24-SSH2 2 9 chr17:40053298:- chr17:29703062:- INFRAME NA TCGA-B6-A0WW-01A-11R-A109-07 C22orf29-HIRA 2 7 chr22:19854443:- chr22:19331556:- . NA TCGA-B6-A0WW-01A-11R-A109-07 GNB1L-HIRA 2 7 chr22:19854443:- chr22:19331556:- . NA TCGA-B6-A0WW-01A-11R-A109-07 DDHD2-GPAT4 1 3 chr8:38233214:+ chr8:41598292:+ . NA TCGA-B6-A0WX-01A-11R-A109-07 ACVR1B-PCBP2 4 20 chr12:51951834:+ chr12:53455885:+ FRAMESHIFT NA TCGA-B6-A0WX-01A-11R-A109-07 SLC24A3-PLCB4 1 6 chr20:19585544:+ chr20:9362896:+ INFRAME NA TCGA-B6-A0WY-01A-11R-A109-07 TNRC6B-COL18A1 1 9 chr22:40044998:+ chr21:45468242:+ . NA TCGA-B6-A0WY-01A-11R-A109-07 DNMT1-OLFM2 1 4 chr19:10231204:- chr19:9860794:- . NA TCGA-B6-A0X1-01A-11R-A109-07 NEXN-AK5 11 54 chr1:77933479:+ chr1:77483317:+ INFRAME NA TCGA-B6-A0X1-01A-11R-A109-07 TRIM2-ARFIP1 6 21 chr4:153152612:+ chr4:152829625:+ . NA TCGA-B6-A0X1-01A-11R-A109-07 FAM49A-PRR4 6 8 chr2:16623864:- chr12:10973721:- . NA TCGA-B6-A0X1-01A-11R-A109-07 ASAP1-KCNH1 5 8 chr8:130076348:- chr1:210804166:- INFRAME NA TCGA-B6-A0X1-01A-11R-A109-07 ALOX12P2-WSCD1 2 18 chr17:6854453:+ chr17:6080371:+ . NA TCGA-B6-A0X1-01A-11R-A109-07 ANO9-DEAF1 3 14 chr11:428088:- chr11:654051:- FRAMESHIFT NA TCGA-B6-A0X1-01A-11R-A109-07 DCAF6-RCSD1 4 5 chr1:167937008:+ chr1:167683900:+ FRAMESHIFT NA TCGA-B6-A0X1-01A-11R-A109-07 TBCE-TBC1D22A 1 17 chr1:235380149:+ chr22:47111508:+ FRAMESHIFT NA TCGA-B6-A0X1-01A-11R-A109-07 DDX42-HSF5 2 10 chr17:63774376:+ chr17:58422430:- . NA TCGA-B6-A0X1-01A-11R-A109-07 HIST1H2AC-C6orf89 4 1 chr6:26124245:+ chr6:36879008:+ . NA TCGA-B6-A0X1-01A-11R-A109-07 ACAD9-RAB7A 3 1 chr3:128884746:+ chr3:128813327:+ INFRAME NA TCGA-B6-A0X1-01A-11R-A109-07 DDX42-RNF43 1 8 chr17:63775178:+ chr17:58371033:- . Likely Oncogenic NA TCGA-B6-A0X1-01A-11R-A109-07 SMC5-TJP2 2 4 chr9:70300200:+ chr9:69212548:+ INFRAME NA TCGA-B6-A0X1-01A-11R-A109-07 TRMT11-RNF217 1 6 chr6:126013101:+ chr6:125076657:+ FRAMESHIFT NA TCGA-B6-A0X1-01A-11R-A109-07 C19orf47-NUMBL 1 3 chr19:40333851:- chr19:40673649:- INFRAME NA TCGA-B6-A0X1-01A-11R-A109-07 HSD17B3-ENPP2 1 3 chr9:96298416:- chr8:119626720:- FRAMESHIFT NA TCGA-B6-A0X1-01A-11R-A109-07 TNFRSF11A-KIAA1468 1 3 chr18:62369484:+ chr18:62287351:+ INFRAME NA TCGA-B6-A0X1-01A-11R-A109-07 CREG1-MPC2 1 2 chr1:167553388:- chr1:167935898:- . NA TCGA-B6-A0X7-01A-11R-A10J-07 NCOA4-OR13A1 5 15 chr10:46030526:- chr10:45307808:- . NA TCGA-B6-A0X7-01A-11R-A10J-07 ALX4-STK33 4 7 chr11:44267494:- chr11:8392710:- INFRAME NA TCGA-B6-A1KC-01B-11R-A157-07 PHF3-FNTA 3 37 chr6:63713175:+ chr8:43064101:+ INFRAME NA TCGA-B6-A1KF-01A-11R-A13Q-07 PIK3R1-NDUFB7 36 63 chr5:68281006:+ chr19:14566933:- INFRAME Likely Oncogenic NA TCGA-B6-A1KF-01A-11R-A13Q-07 DOT1L-TLE6 3 38 chr19:2180756:+ chr19:2978198:+ . NA TCGA-B6-A1KI-01A-11R-A14M-07 SCGB2A2-MGP 1 22 chr11:62271068:+ chr12:14884245:- FRAMESHIFT NA TCGA-B6-A1KN-01A-11R-A13Q-07 RARA-IGFBP4 6 33 chr17:40331396:+ chr17:40452985:+ INFRAME NA TCGA-B6-A1KN-01A-11R-A13Q-07 TBC1D25-ERLIN2 10 16 chrX:48545023:+ chr8:37749559:+ INFRAME NA TCGA-B6-A1KN-01A-11R-A13Q-07 CCDC57-DIAPH2 3 22 chr17:82172638:- chrX:97072941:+ INFRAME NA TCGA-B6-A1KN-01A-11R-A13Q-07 FBXL20-INTS13 3 19 chr17:39303585:- chr12:26925851:- FRAMESHIFT NA TCGA-B6-A1KN-01A-11R-A13Q-07 FBXL20-CD163L1 3 9 chr17:39343180:- chr12:7406852:- FRAMESHIFT NA TCGA-B6-A1KN-01A-11R-A13Q-07 MYO9B-PNN 3 9 chr19:17163122:+ chr14:39176527:+ FRAMESHIFT NA TCGA-B6-A1KN-01A-11R-A13Q-07 GSDMC-FAM49B 1 5 chr8:129786011:- chr8:129871496:- . NA TCGA-B6-A2IU-01A-32R-A18M-07 PRKAG2-VPS50 10 14 chr7:151876507:- chr7:93341427:+ INFRAME NA TCGA-B6-A401-01A-11R-A239-07 CPED1-BCO2 2 1 chr7:121271430:+ chr11:112213724:+ INFRAME NA TCGA-B6-A409-01A-11R-A24H-07 C1orf123-ALG6 1 8 chr1:53220261:- chr1:63396513:+ FRAMESHIFT NA TCGA-B6-A40B-01A-11R-A239-07 CTTN-BCAR4 80 353 chr11:70409960:+ chr16:11820297:- . NA TCGA-BH-A0AU-01A-11R-A12P-07 CDK16-IGHJ5 28 0 chrX:47218484:+ chr14:105863857:- . NA TCGA-BH-A0AU-01A-11R-A12P-07 ARHGEF17-EP300 5 32 chr11:73311830:+ chr22:41149038:+ INFRAME Likely Oncogenic NA TCGA-BH-A0AU-01A-11R-A12P-07 ALG14-NRDC 2 23 chr1:95064866:- chr1:51810404:- INFRAME NA TCGA-BH-A0AU-01A-11R-A12P-07 ARID3A-PMEPA1 1 26 chr19:968503:+ chr20:57659697:- INFRAME NA TCGA-BH-A0AU-01A-11R-A12P-07 C22orf39-CABIN1 2 12 chr22:19383620:- chr22:24164400:+ . NA TCGA-BH-A0AU-01A-11R-A12P-07 HIRA-CABIN1 2 12 chr22:19383620:- chr22:24164400:+ FRAMESHIFT NA TCGA-BH-A0AU-01A-11R-A12P-07 PIGU-UQCC1 2 2 chr20:34616042:- chr20:35366614:- INFRAME NA TCGA-BH-A0AV-01A-31R-A115-07 NPTN-CLUAP1 249 553 chr15:73587524:- chr16:3530568:+ INFRAME NA TCGA-BH-A0AV-01A-31R-A115-07 NSA2-HEXB 14 127 chr5:74770810:+ chr5:74713506:+ INFRAME NA TCGA-BH-A0AV-01A-31R-A115-07 PRRC2B-SET 5 22 chr9:131479393:+ chr9:128683780:+ . NA TCGA-BH-A0AV-01A-31R-A115-07 SPPL3-CD99L2 3 3 chr12:120903845:- chrX:150831293:- FRAMESHIFT NA TCGA-BH-A0AV-01A-31R-A115-07 CA13-RBKS 1 9 chr8:85268627:+ chr2:27832777:- FRAMESHIFT NA TCGA-BH-A0AV-01A-31R-A115-07 ADGRB2-SPOCD1 2 3 chr1:31755999:- chr1:31794235:- FRAMESHIFT NA TCGA-BH-A0AV-01A-31R-A115-07 EFR3A-ASAP1 1 3 chr8:131996497:+ chr8:130236994:- INFRAME NA TCGA-BH-A0AV-01A-31R-A115-07 MYO9A-GRAMD2 1 3 chr15:72117680:- chr15:72163476:- . NA TCGA-BH-A0AW-01A-11R-A056-07 MED1-ABCC3 181 479 chr17:39447798:- chr17:50655832:+ INFRAME NA TCGA-BH-A0AW-01A-11R-A056-07 HDHD2-SNF8 17 92 chr18:47150378:- chr17:48937124:- . NA TCGA-BH-A0AW-01A-11R-A056-07 THRA-B4GALNT2 3 13 chr17:40077608:+ chr17:49159037:+ INFRAME NA TCGA-BH-A0AY-01A-21R-A00Z-07 EXPH5-SLC35F2 4 12 chr11:108593418:- chr11:107815965:- INFRAME NA TCGA-BH-A0AY-01A-21R-A00Z-07 ACTR3B-TAB2 1 1 chr7:152825122:+ chr6:149369909:+ . NA TCGA-BH-A0AY-01A-21R-A00Z-07 RBM10-YAP1 1 1 chrX:47147498:+ chr11:102209517:+ FRAMESHIFT Likely Oncogenic NA TCGA-BH-A0AZ-01A-21R-A12P-07 VPS41-ANKFN1 2 4 chr7:38898091:- chr17:56440327:+ FRAMESHIFT NA TCGA-BH-A0B3-01A-11R-A056-07 LHFPL2-KCNIP1 35 123 chr5:78564813:- chr5:170718758:+ . NA TCGA-BH-A0B3-01A-11R-A056-07 HSF1-ADAMTS12 20 37 chr8:144291874:+ chr5:33596060:- FRAMESHIFT NA TCGA-BH-A0B3-01A-11R-A056-07 NOL11-CARD11 4 11 chr17:67737145:+ chr7:2939928:- INFRAME NA TCGA-BH-A0B3-01A-11R-A056-07 RASA1-VDAC1 3 14 chr5:87369900:+ chr5:133993018:- . Likely Oncogenic NA TCGA-BH-A0B3-01A-11R-A056-07 GIGYF2-ASB18 1 12 chr2:232703489:+ chr2:236237956:- . NA TCGA-BH-A0B3-01A-11R-A056-07 NCOA1-PSD2 1 7 chr2:24564430:+ chr5:139833702:+ . NA TCGA-BH-A0B3-01A-11R-A056-07 KDM3A-RFX8 1 5 chr2:86466883:+ chr2:101466900:- . NA TCGA-BH-A0B5-01A-11R-A12P-07 ANKRD30A-TACC1P1 41 239 chr10:37173911:+ chr10:37523011:+ . NA TCGA-BH-A0B5-01A-11R-A12P-07 G6PD-F8 13 20 chrX:154546036:- chrX:154863227:- INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 KIF5B-HPS4 34 125 chr10:32048464:- chr22:26464826:- FRAMESHIFT NA TCGA-BH-A0B7-01A-12R-A115-07 ANKLE2-SNU13 32 102 chr12:132747832:- chr22:41680364:- INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 MTSS1-ST3GAL1 23 73 chr8:124727884:- chr8:133466090:- INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 RPL19-CCL11 9 42 chr17:39200478:+ chr17:34287096:+ . NA TCGA-BH-A0B7-01A-12R-A115-07 GTF2F2-NBEA 11 18 chr13:45207505:+ chr13:35349108:+ INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 SCYL1-FRMD8 3 37 chr11:65527117:+ chr11:65404864:+ INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 CACNB1-LASP1 3 25 chr17:39194884:- chr17:38898412:+ INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 IGKV2D-26-IGKC 8 2 chr2:89986504:+ chr2:88857681:- FRAMESHIFT NA TCGA-BH-A0B7-01A-12R-A115-07 MZT1-TERF1 6 9 chr13:72718952:- chr8:73026940:+ INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 PIP4K2B-TMEM132E 4 14 chr17:38799266:- chr17:34626127:+ FRAMESHIFT NA TCGA-BH-A0B7-01A-12R-A115-07 EEA1-PAH 4 10 chr12:92864860:- chr12:102855332:- INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 SAMD12-FER1L6-AS2 3 13 chr8:118580715:- chr8:124060792:- . NA TCGA-BH-A0B7-01A-12R-A115-07 TMEM132E-GPATCH8 2 15 chr17:34581143:+ chr17:44424492:- FRAMESHIFT NA TCGA-BH-A0B7-01A-12R-A115-07 MED24-SLC4A1 3 10 chr17:40023131:- chr17:44251332:- INFRAME NA TCGA-BH-A0B7-01A-12R-A115-07 UBTF-CACNB1 4 5 chr17:44220740:- chr17:39194970:- . NA TCGA-BH-A0B7-01A-12R-A115-07 ARHGAP21-ASPHD2 3 7 chr10:24594950:- chr22:26442459:+ FRAMESHIFT NA TCGA-BH-A0B7-01A-12R-A115-07 PGAP3-IKZF3 2 7 chr17:39684597:- chr17:39832151:- FRAMESHIFT NA TCGA-BH-A0B7-01A-12R-A115-07 CACNB1-CDC6 1 2 chr17:39194884:- chr17:40300828:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 PIP5K1A-MLLT11 84 268 chr1:151199081:+ chr1:151067219:+ . NA TCGA-BH-A0B9-01A-11R-A056-07 AARS-COG4 46 164 chr16:70282620:- chr16:70519731:- INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 AMMECR1L-SAP130 50 97 chr2:127884203:- chr2:127955344:- . NA TCGA-BH-A0B9-01A-11R-A056-07 YARS-ADM5 14 217 chr1:32781048:- chr19:49689890:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 CDV3-TMEM108 24 124 chr3:133575115:+ chr3:133379752:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 SENP3-ACADVL 13 164 chr17:7564590:+ chr17:7224367:+ . NA TCGA-BH-A0B9-01A-11R-A056-07 AARS-ST3GAL2 23 91 chr16:70269618:- chr16:70381862:- FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 PI4K2A-ZDHHC16 16 55 chr10:97673735:+ chr10:97453618:+ INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 EVA1C-MRAP 16 34 chr21:32495170:+ chr21:32311684:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 CLPB-STARD10 13 27 chr11:72380281:- chr11:72793924:- . NA TCGA-BH-A0B9-01A-11R-A056-07 PYGB-ENTPD6 8 34 chr20:25296449:+ chr20:25213263:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 STUB1-RAB11FIP3 7 38 chr16:682682:+ chr16:505524:+ . NA TCGA-BH-A0B9-01A-11R-A056-07 EEF2K-UQCRC2 7 34 chr16:22264880:+ chr16:21971525:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 ARFGAP2-CELF1 9 21 chr11:47176516:- chr11:47487241:- FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 C11orf84-RTN3 5 23 chr11:63819002:+ chr11:63749991:+ INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 ZNF607-CAPN12 3 31 chr19:37707914:- chr19:38742528:- INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 RBM38-SPO11 7 12 chr20:57393333:+ chr20:57342729:+ INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 HDAC1-KPNA6 4 22 chr1:32324553:+ chr1:32154588:+ INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 RFTN1-DAZL 3 26 chr3:16326773:- chr3:16605311:- . NA TCGA-BH-A0B9-01A-11R-A056-07 CLIP4-TOGARAM2 1 25 chr2:29114312:+ chr2:29003492:+ . NA TCGA-BH-A0B9-01A-11R-A056-07 CNNM2-SUFU 3 13 chr10:102920101:+ chr10:102615268:+ FRAMESHIFT NA TCGA-BH-A0B9-01A-11R-A056-07 TM9SF2-MTUS2 3 11 chr13:99501777:+ chr13:28839778:+ . NA TCGA-BH-A0B9-01A-11R-A056-07 EHF-CAT 2 10 chr11:34646684:+ chr11:34464105:+ INFRAME NA TCGA-BH-A0B9-01A-11R-A056-07 ATN1-LRRC23 2 2 chr12:6928384:+ chr12:6905585:+ . NA TCGA-BH-A0B9-01A-11R-A056-07 KIAA1429-CAMK2A 1 5 chr8:94529070:- chr5:150222713:- FRAMESHIFT NA TCGA-BH-A0BC-01A-22R-A084-07 DMC1-DNAL4 2 11 chr22:38566590:- chr22:38781009:- INFRAME NA TCGA-BH-A0BD-01A-11R-A034-07 UVRAG-KCTD14 7 33 chr11:76065788:+ chr11:78017270:- INFRAME NA TCGA-BH-A0BD-01A-11R-A034-07 CCS-KDM2A 7 27 chr11:66600549:+ chr11:67149055:+ . NA TCGA-BH-A0BD-01A-11R-A034-07 ORAOV1-RNF169 1 6 chr11:69667895:- chr11:74834676:+ INFRAME NA TCGA-BH-A0BF-01A-21R-A12P-07 PDHX-KDM6A 6 28 chr11:34916815:+ chrX:45107410:+ FRAMESHIFT Likely Oncogenic NA TCGA-BH-A0BF-01A-21R-A12P-07 COX20-SDCCAG8 3 31 chr1:244842258:+ chr1:243341039:+ FRAMESHIFT NA TCGA-BH-A0BG-01A-11R-A115-07 PHF21A-CCDC178 13 85 chr11:46076754:- chr18:33267297:- INFRAME NA TCGA-BH-A0BG-01A-11R-A115-07 NFIX-LRP4 2 11 chr19:13025552:+ chr11:46902929:- INFRAME NA TCGA-BH-A0BJ-01A-11R-A056-07 NLE1-BAIAP2 2 4 chr17:35141979:- chr17:81053668:+ INFRAME NA TCGA-BH-A0BJ-01A-11R-A056-07 VWF-ZC3H14 1 2 chr12:6095460:- chr14:88574693:+ INFRAME NA TCGA-BH-A0BL-01A-11R-A115-07 PRIM2-COL21A1 24 38 chr6:57382168:+ chr6:56064622:- INFRAME NA TCGA-BH-A0BL-01A-11R-A115-07 IGF2R-SLC22A3 5 28 chr6:160010785:+ chr6:160397979:+ INFRAME NA TCGA-BH-A0BL-01A-11R-A115-07 IGF2R-ACVR2A 10 7 chr6:159969395:+ chr2:147915191:+ FRAMESHIFT NA TCGA-BH-A0BL-01A-11R-A115-07 RASA2-NELFB 8 10 chr3:141559995:+ chr9:137263037:+ FRAMESHIFT NA TCGA-BH-A0BL-01A-11R-A115-07 AGPAT3-RPS19 4 10 chr21:43904019:+ chr19:41860134:+ . NA TCGA-BH-A0BL-01A-11R-A115-07 CGGBP1-SCN11A 3 11 chr3:88140970:- chr3:38926931:- . NA TCGA-BH-A0BL-01A-11R-A115-07 SLC39A9-PLEKHD1 1 12 chr14:69399465:+ chr14:69500115:+ FRAMESHIFT NA TCGA-BH-A0BO-01A-23R-A12D-07 PPP2R5D-ASCC3 3 6 chr6:42989688:+ chr6:100767345:- INFRAME NA TCGA-BH-A0BP-01A-11R-A115-07 GTF3C4-LMX1B 26 86 chr9:132683693:+ chr9:126690836:+ INFRAME NA TCGA-BH-A0BP-01A-11R-A115-07 BTBD1-MESP1 10 52 chr15:83041728:- chr15:89750227:- FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 ALCAM-YIF1B 9 31 chr3:105367481:+ chr19:38309643:- INFRAME NA TCGA-BH-A0BP-01A-11R-A115-07 RAMP1-MLPH 4 31 chr2:237911600:+ chr2:237546606:+ INFRAME NA TCGA-BH-A0BP-01A-11R-A115-07 SIRT6-CERS4 5 20 chr19:4175680:- chr19:8251076:+ . NA TCGA-BH-A0BP-01A-11R-A115-07 TYK2-SHC2 3 13 chr19:10357764:- chr19:430747:- INFRAME NA TCGA-BH-A0BP-01A-11R-A115-07 ADAMTS17-PCDHA13 4 6 chr15:100330889:- chr5:140978949:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 ADAMTS17-PCDHAC1 4 6 chr15:100330889:- chr5:140978949:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 ADAMTS17-PCDHAC2 4 6 chr15:100330889:- chr5:140978949:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 UNC45A-SV2B 5 2 chr15:90943082:+ chr15:91266582:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 LRRC28-MEF2A 4 5 chr15:99334129:+ chr15:99645561:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 ZBTB45-ZFR2 3 9 chr19:58516395:- chr19:3823403:- INFRAME NA TCGA-BH-A0BP-01A-11R-A115-07 PNPO-NPEPPS 1 13 chr17:47943430:+ chr17:47591956:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 BCAS4-SLC9A8 1 4 chr20:50830380:+ chr20:49877981:+ FRAMESHIFT NA TCGA-BH-A0BP-01A-11R-A115-07 RAD23A-RNASEH2A 1 4 chr19:12949408:+ chr19:12807008:+ FRAMESHIFT NA TCGA-BH-A0BR-01A-21R-A115-07 UQCRFS1-PQLC2L 10 120 chr19:29212905:- chr3:157677525:+ . NA TCGA-BH-A0BR-01A-21R-A115-07 FOXP1-RGAG4 21 75 chr3:71493426:- chrX:72127710:- . Likely Oncogenic NA TCGA-BH-A0BR-01A-21R-A115-07 MARCH2-OR7G2 28 43 chr19:8430867:+ chr19:9103259:- FRAMESHIFT NA TCGA-BH-A0BR-01A-21R-A115-07 AP1M1-ZNF93 18 43 chr19:16209177:+ chr19:19933182:+ FRAMESHIFT NA TCGA-BH-A0BR-01A-21R-A115-07 TBC1D9-CORO1C 14 38 chr4:140670720:- chr12:108678394:- INFRAME NA TCGA-BH-A0BR-01A-21R-A115-07 RBFA-TXNL4A 7 11 chr18:80038617:+ chr18:80030577:- . NA TCGA-BH-A0BR-01A-21R-A115-07 TBC1D9-SMARCA5 3 14 chr4:140639086:- chr4:143517355:+ INFRAME NA TCGA-BH-A0BR-01A-21R-A115-07 NDUFA7-SH2D3A 1 13 chr19:8316496:- chr19:6754932:- FRAMESHIFT NA TCGA-BH-A0BR-01A-21R-A115-07 SLC25A53-NXF3 2 4 chrX:104156878:- chrX:103084495:- . NA TCGA-BH-A0BS-01A-11R-A12P-07 FBXL7-FAM134B 1 1 chr5:15500713:+ chr5:16483472:- FRAMESHIFT NA TCGA-BH-A0BT-01A-11R-A12P-07 ZNF98-NDUFA7 3 29 chr19:22532339:- chr19:8311595:- FRAMESHIFT NA TCGA-BH-A0BV-01A-11R-A00Z-07 PACS1-ZDHHC24 1 3 chr11:66070842:+ chr11:66543981:- INFRAME NA TCGA-BH-A0BW-01A-11R-A115-07 UCK2-DHX9 2 11 chr1:165905969:+ chr1:182881264:+ FRAMESHIFT NA TCGA-BH-A0BW-01A-11R-A115-07 C1orf198-GXYLT2 2 3 chr1:230868812:- chr3:72908367:+ . NA TCGA-BH-A0BZ-01A-31R-A12P-07 MRPS23-VEZF1 10 60 chr17:57849240:- chr17:57974900:- INFRAME NA TCGA-BH-A0BZ-01A-31R-A12P-07 PRCC-HAPLN2 11 28 chr1:156768239:+ chr1:156623467:+ . NA TCGA-BH-A0BZ-01A-31R-A12P-07 POLE-GOLGA3 7 10 chr12:132672215:- chr12:132784307:- INFRAME NA TCGA-BH-A0BZ-01A-31R-A12P-07 FLAD1-UBAP2L 6 5 chr1:154983397:+ chr1:154227282:+ . NA TCGA-BH-A0BZ-01A-31R-A12P-07 SYNRG-CCR7 2 14 chr17:37561195:- chr17:40558942:- INFRAME NA TCGA-BH-A0BZ-01A-31R-A12P-07 FBXO38-SPINK6 3 7 chr5:148417204:+ chr5:148203021:+ . NA TCGA-BH-A0BZ-01A-31R-A12P-07 RFTN1-DAZL 2 3 chr3:16409375:- chr3:16594583:- INFRAME NA TCGA-BH-A0BZ-01A-31R-A12P-07 NOL10-PDIA6 1 5 chr2:10654481:- chr2:10787439:- FRAMESHIFT NA TCGA-BH-A0C0-01A-21R-A056-07 AGPAT2-CDC42SE1 27 51 chr9:136676961:- chr1:151055126:- INFRAME NA TCGA-BH-A0C0-01A-21R-A056-07 MROH1-ARMC2 7 6 chr8:144223230:+ chr6:108868824:+ INFRAME NA TCGA-BH-A0C0-01A-21R-A056-07 SF1-ITPR1 4 9 chr11:64776498:- chr3:4627763:+ INFRAME NA TCGA-BH-A0C0-01A-21R-A056-07 STAU2-OC90 1 17 chr8:73738284:- chr8:132045883:- FRAMESHIFT NA TCGA-BH-A0C0-01A-21R-A056-07 UBE2J2-ACAP3 1 17 chr1:1262170:- chr1:1302046:- . NA TCGA-BH-A0C0-01A-21R-A056-07 MCM5-RALGAPB 2 11 chr22:35403542:+ chr20:38553867:+ INFRAME NA TCGA-BH-A0C0-01A-21R-A056-07 DEGS2-WARS 3 4 chr14:100159506:- chr14:100343387:- INFRAME NA TCGA-BH-A0C0-01A-21R-A056-07 MYO6-IBTK 3 3 chr6:75915060:+ chr6:82225647:- . NA TCGA-BH-A0C0-01A-21R-A056-07 PTK7-PTCRA 2 4 chr6:43146698:+ chr6:42923027:+ FRAMESHIFT NA TCGA-BH-A0C1-01B-11R-A12D-07 DCTN2-USP15 2 12 chr12:57547028:- chr12:62294179:+ FRAMESHIFT NA TCGA-BH-A0C1-01B-11R-A12D-07 BOLA2B-BCAR4 1 15 chr16:30193358:- chr16:11820297:- . NA TCGA-BH-A0C3-01A-21R-A12P-07 PPFIA1-LRP5 17 25 chr11:70376600:+ chr11:68411436:+ FRAMESHIFT NA TCGA-BH-A0C3-01A-21R-A12P-07 SKAP1-ABCC11 3 35 chr17:48345905:- chr16:48177113:- INFRAME NA TCGA-BH-A0C3-01A-21R-A12P-07 MAP4K2-NETO2 1 6 chr11:64799421:- chr16:47086339:- FRAMESHIFT NA TCGA-BH-A0C3-01A-21R-A12P-07 PPFIA1-XRRA1 1 3 chr11:70362488:+ chr11:74937068:- FRAMESHIFT NA TCGA-BH-A0C7-01B-11R-A115-07 EPC1-PTGR2 75 167 chr10:32346763:- chr14:73874023:+ INFRAME NA TCGA-BH-A0C7-01B-11R-A115-07 TRIP12-SLC4A10 2 86 chr2:229836848:- chr2:161964135:+ FRAMESHIFT NA TCGA-BH-A0C7-01B-11R-A115-07 STAM2-THSD7B 12 19 chr2:152126226:- chr2:137056420:+ FRAMESHIFT NA TCGA-BH-A0C7-01B-11R-A115-07 STARD13-TNFRSF8 2 19 chr13:33285470:- chr1:12109566:+ INFRAME NA TCGA-BH-A0C7-01B-11R-A115-07 CLASP1-HK2 1 2 chr2:121447337:- chr2:74854293:+ FRAMESHIFT NA TCGA-BH-A0DG-01A-21R-A12P-07 SEPT9-NARF 40 113 chr17:77307197:+ chr17:82472564:+ INFRAME NA TCGA-BH-A0DG-01A-21R-A12P-07 SRP68-LPO 15 81 chr17:76040419:- chr17:58250415:+ INFRAME NA TCGA-BH-A0DG-01A-21R-A12P-07 BCAS3-VMP1 4 123 chr17:60709325:+ chr17:59842082:+ . NA TCGA-BH-A0DG-01A-21R-A12P-07 USP32-PGS1 4 17 chr17:60252381:- chr17:78419546:+ FRAMESHIFT NA TCGA-BH-A0DG-01A-21R-A12P-07 PLEKHG4B-MXI1 4 4 chr5:113448:+ chr10:110279914:+ INFRAME NA TCGA-BH-A0DG-01A-21R-A12P-07 FAM117A-VMP1 2 9 chr17:49763892:- chr17:59731421:+ . NA TCGA-BH-A0DI-01A-21R-A12P-07 TBL1XR1-NAALADL2-AS3 8 15 chr3:177197121:- chr3:175112591:- . NA TCGA-BH-A0DI-01A-21R-A12P-07 KMT2C-CNTNAP2 1 6 chr7:152330601:- chr7:147043907:+ FRAMESHIFT Likely Oncogenic NA TCGA-BH-A0DK-01A-21R-A056-07 NXPH3-KAT7 1 2 chr17:49576273:+ chr17:49796750:+ FRAMESHIFT NA TCGA-BH-A0DK-01A-21R-A056-07 RBBP4-ZMYM4 1 1 chr1:32668398:+ chr1:35398413:+ INFRAME NA TCGA-BH-A0DL-01A-11R-A115-07 ZFP91-ANO1-AS2 32 103 chr11:58584884:+ chr11:70072939:- . NA TCGA-BH-A0DL-01A-11R-A115-07 RYK-RABL3 7 37 chr3:134195082:- chr3:120698573:- FRAMESHIFT NA TCGA-BH-A0DQ-01A-11R-A084-07 ACTN1-SCGN 10 26 chr14:68877082:- chr6:25691056:+ INFRAME NA TCGA-BH-A0DS-01A-11R-A056-07 DRAIC-CORO2B 12 15 chr15:69570904:+ chr15:68725843:+ . NA TCGA-BH-A0DS-01A-11R-A056-07 ODF2-SLC2A8 7 14 chr9:128488025:+ chr9:127407436:+ INFRAME NA TCGA-BH-A0DS-01A-11R-A056-07 VPS37C-FADS3 5 6 chr11:61161391:- chr11:61880151:- . NA TCGA-BH-A0DX-01A-11R-A115-07 SUPT4H1-SEPT4 19 90 chr17:58352067:- chr17:58526313:- INFRAME NA TCGA-BH-A0DX-01A-11R-A115-07 SUGP2-BORCS8 6 37 chr19:19004168:- chr19:19187005:- INFRAME NA TCGA-BH-A0DX-01A-11R-A115-07 CHMP3-RNF103 4 21 chr2:86542252:- chr2:86612274:- FRAMESHIFT NA TCGA-BH-A0DX-01A-11R-A115-07 ICMT-GPR153 4 15 chr1:6233474:- chr1:6255014:- . NA TCGA-BH-A0DX-01A-11R-A115-07 FAF1-PTRH2 4 13 chr1:50655442:- chr17:59697978:- INFRAME NA TCGA-BH-A0DX-01A-11R-A115-07 SACM1L-ROBO2 2 4 chr3:45689497:+ chr3:75937481:+ . NA TCGA-BH-A0DZ-01A-11R-A00Z-07 STK11IP-S100A16 3 1 chr2:219608316:+ chr1:153608123:- INFRAME NA TCGA-BH-A0DZ-01A-11R-A00Z-07 TAOK1-CCL2 1 8 chr17:29530619:+ chr17:34256222:+ FRAMESHIFT NA TCGA-BH-A0DZ-01A-11R-A00Z-07 PMM2-PPP2R3C 2 1 chr16:8806407:+ chr14:35091207:- FRAMESHIFT NA TCGA-BH-A0DZ-01A-11R-A00Z-07 USP32-MAP3K3 1 4 chr17:60345481:- chr17:63693549:+ FRAMESHIFT NA TCGA-BH-A0DZ-01A-11R-A00Z-07 ERC1-AFDN 1 1 chr12:1444750:+ chr6:167965757:+ INFRAME NA TCGA-BH-A0DZ-01A-11R-A00Z-07 ZNF615-FAM174B 1 1 chr19:52008141:- chr15:92630345:- FRAMESHIFT NA TCGA-BH-A0E0-01A-11R-A056-07 BOP1-CYHR1 2 7 chr8:144289095:- chr8:144465096:- . NA TCGA-BH-A0E2-01A-11R-A056-07 CAPRIN1-COMMD9 8 23 chr11:34083041:+ chr11:36276240:- FRAMESHIFT NA TCGA-BH-A0E2-01A-11R-A056-07 OSBPL8-RAB3IP 1 9 chr12:76559397:- chr12:69784720:+ . NA TCGA-BH-A0E2-01A-11R-A056-07 RAB12-FAM19A2 1 7 chr18:8624998:+ chr12:61867426:- INFRAME NA TCGA-BH-A0E2-01A-11R-A056-07 LRPPRC-NRXN1 1 3 chr2:43925067:- chr2:50925955:- INFRAME NA TCGA-BH-A0E2-01A-11R-A056-07 ZNF880-ATOH8 1 2 chr19:52369977:+ chr2:85786885:+ INFRAME NA TCGA-BH-A0E6-01A-11R-A034-07 CASC4-TGM5 4 25 chr15:44338317:+ chr15:43240990:- INFRAME NA TCGA-BH-A0EB-01A-11R-A034-07 RSF1-TENM4 1 5 chr11:77725545:- chr11:78856178:- INFRAME NA TCGA-BH-A0EE-01A-11R-A034-07 SETDB2-ERH 66 360 chr13:49467960:+ chr14:69380640:- INFRAME NA TCGA-BH-A0EE-01A-11R-A034-07 KPNA3-FLJ22447 16 42 chr13:49792438:- chr14:61650962:+ . NA TCGA-BH-A0EE-01A-11R-A034-07 DOPEY2-TRPM2 14 22 chr21:36164871:+ chr21:44405142:+ INFRAME NA TCGA-BH-A0EE-01A-11R-A034-07 DGCR2-DESI1 7 42 chr22:19041058:- chr22:41607861:- INFRAME NA TCGA-BH-A0EE-01A-11R-A034-07 FBXL20-RHBDF2 6 11 chr17:39298990:- chr17:76487909:- . NA TCGA-BH-A0EE-01A-11R-A034-07 HLCS-SLC37A1 1 3 chr21:36896860:- chr21:42543436:+ INFRAME NA TCGA-BH-A0EI-01A-11R-A115-07 RAB11FIP1-HTRA4 33 124 chr8:37870420:- chr8:38979215:+ INFRAME NA TCGA-BH-A0EI-01A-11R-A115-07 LSM1-NSD3 9 25 chr8:38169802:- chr8:38348215:- . NA TCGA-BH-A0EI-01A-11R-A115-07 FGFR1-ADGRA2 3 11 chr8:38457356:- chr8:37814896:+ FRAMESHIFT Likely Oncogenic NA TCGA-BH-A0GY-01A-11R-A056-07 ZNF160-ADAM5 10 211 chr19:53091637:- chr8:39417214:+ . NA TCGA-BH-A0GY-01A-11R-A056-07 CTSZ-ZHX3 2 53 chr20:58996639:- chr20:41185201:- INFRAME NA TCGA-BH-A0GY-01A-11R-A056-07 LRP3-THAP8 4 21 chr19:33202986:+ chr19:36040136:- INFRAME NA TCGA-BH-A0GY-01A-11R-A056-07 IGSF3-MAN1A2 2 11 chr1:116666284:- chr1:117402186:+ FRAMESHIFT NA TCGA-BH-A0GY-01A-11R-A056-07 PTGFRN-AGBL4 1 15 chr1:116949572:+ chr1:49697437:- INFRAME NA TCGA-BH-A0H0-01A-11R-A056-07 MEGF8-PRR19 5 79 chr19:42351761:+ chr19:42310271:+ INFRAME NA TCGA-BH-A0H0-01A-11R-A056-07 PRR19-PPP1R37 16 21 chr19:42302503:+ chr19:45138514:+ . NA TCGA-BH-A0H0-01A-11R-A056-07 GNAI3-CTTNBP2NL 2 3 chr1:109579361:+ chr1:112412194:+ . NA TCGA-BH-A0H6-01A-21R-A056-07 ARFGEF2-CNIH2 15 50 chr20:48941987:+ chr11:66282259:+ INFRAME NA TCGA-BH-A0H6-01A-21R-A056-07 RAB1B-ARFGEF2 3 7 chr11:66275935:+ chr20:48951323:+ INFRAME NA TCGA-BH-A0H7-01A-13R-A056-07 ATXN10-APPL1 9 76 chr22:45740538:+ chr3:57246076:+ INFRAME NA TCGA-BH-A0H7-01A-13R-A056-07 PRELID3B-PTPRT 1 33 chr20:59042699:- chr20:42885932:- FRAMESHIFT Likely Oncogenic NA TCGA-BH-A0H7-01A-13R-A056-07 TAF4-LARGE1 4 20 chr20:62010046:- chr22:33856802:- . NA TCGA-BH-A0H7-01A-13R-A056-07 FNIP1-ACSL6 3 19 chr5:131796830:- chr5:131994251:- FRAMESHIFT NA TCGA-BH-A0H7-01A-13R-A056-07 CCDC40-ANAPC11 4 10 chr17:80038186:+ chr17:81899920:+ INFRAME NA TCGA-BH-A0H7-01A-13R-A056-07 DAG1-ZNF589 3 13 chr3:49470433:+ chr3:48260813:+ . NA TCGA-BH-A0H7-01A-13R-A056-07 FAM83D-SPECC1L 4 9 chr20:38926925:+ chr22:24313313:+ INFRAME NA TCGA-BH-A0H7-01A-13R-A056-07 ITCH-TAB1 5 4 chr20:34369470:+ chr22:39415006:+ . NA TCGA-BH-A0H7-01A-13R-A056-07 RBFOX2-NTSR1 3 11 chr22:36028240:- chr20:62754685:+ INFRAME NA TCGA-BH-A0H7-01A-13R-A056-07 RAB10-ARHGAP39 2 10 chr2:26034735:+ chr8:144555643:- FRAMESHIFT NA TCGA-BH-A0H7-01A-13R-A056-07 FNIP2-LRBA 2 8 chr4:158769319:+ chr4:150321383:- . NA TCGA-BH-A0H7-01A-13R-A056-07 AURKA-GATSL3 1 11 chr20:56392154:- chr22:30288776:- . NA TCGA-BH-A0H7-01A-13R-A056-07 COMT-CERK 1 4 chr22:19961289:+ chr22:46699465:- . NA TCGA-BH-A0H7-01A-13R-A056-07 AFF3-ZNF658 1 3 chr2:100006632:- chr9:66908256:+ INFRAME NA TCGA-BH-A0H7-01A-13R-A056-07 LAMA3-PSMA8 1 3 chr18:23714072:+ chr18:26178830:+ INFRAME NA TCGA-BH-A0H9-01A-11R-A056-07 NRG2-CYSTM1 15 26 chr5:140042370:- chr5:140243305:+ INFRAME NA TCGA-BH-A0H9-01A-11R-A056-07 UQCC1-SAMHD1 6 30 chr20:35394092:- chr20:36946804:- FRAMESHIFT NA TCGA-BH-A0H9-01A-11R-A056-07 SLC9A8-BICDL2 9 15 chr20:49815189:+ chr16:3031150:- FRAMESHIFT NA TCGA-BH-A0H9-01A-11R-A056-07 ATP6V0E1-BNIP1 3 3 chr5:172994822:+ chr5:173154322:+ FRAMESHIFT NA TCGA-BH-A0H9-01A-11R-A056-07 MTCL1-DLGAP1 2 3 chr18:8720496:+ chr18:3742512:- FRAMESHIFT NA TCGA-BH-A0H9-01A-11R-A056-07 STAU1-ATF7IP2 1 7 chr20:49117126:- chr16:10414574:+ . NA TCGA-BH-A0HB-01A-11R-A056-07 LDLRAD3-ENPP7P7 40 105 chr11:36098461:+ chr11:67812753:- . NA TCGA-BH-A0HB-01A-11R-A056-07 PRPF4B-CDYL 17 30 chr6:4021466:+ chr6:4952266:+ FRAMESHIFT NA TCGA-BH-A0HB-01A-11R-A056-07 TRIM37-TUBD1 6 12 chr17:59104293:- chr17:59860424:- FRAMESHIFT NA TCGA-BH-A0HB-01A-11R-A056-07 EPB41L3-LAMA1 4 13 chr18:5395067:- chr18:7037751:- INFRAME NA TCGA-BH-A0HB-01A-11R-A056-07 B3GLCT-MTUS2 3 5 chr13:31323895:+ chr13:29439983:+ INFRAME NA TCGA-BH-A0HB-01A-11R-A056-07 CLTC-EPB41L3 1 10 chr17:59620173:+ chr18:5397426:- INFRAME NA TCGA-BH-A0HB-01A-11R-A056-07 ZNF564-AKAP8L 2 4 chr19:12551330:- chr19:15410594:- FRAMESHIFT NA TCGA-BH-A0HB-01A-11R-A056-07 FRYL-OCIAD2 1 1 chr4:48780078:- chr4:48904611:- . NA TCGA-BH-A0HB-01A-11R-A056-07 SLC22A23-SERPINB6 1 1 chr6:3455906:- chr6:2949069:- INFRAME NA TCGA-BH-A0HI-01A-11R-A084-07 COG5-CEP41 4 61 chr7:107412502:- chr7:130394966:- . NA TCGA-BH-A0HI-01A-11R-A084-07 SEMA6A-DTWD2 2 4 chr5:116574185:- chr5:118944649:- . NA TCGA-BH-A0HP-01A-12R-A084-07 CRBN-GRM7 3 15 chr3:3167634:- chr3:6828631:+ FRAMESHIFT NA TCGA-BH-A0HU-01A-11R-A034-07 MICU1-ARHGAP22 17 66 chr10:72407929:- chr10:48446619:- FRAMESHIFT NA TCGA-BH-A0HU-01A-11R-A034-07 SMURF1-PDAP1 8 19 chr7:99143726:- chr7:99398013:- FRAMESHIFT NA TCGA-BH-A0HU-01A-11R-A034-07 FRYL-ZNF606 3 10 chr4:48710519:- chr19:57988721:- . NA TCGA-BH-A0HW-01A-11R-A034-07 ATP2C1-FCGBP 4 15 chr3:130959341:+ chr19:39899697:- FRAMESHIFT NA TCGA-BH-A0HW-01A-11R-A034-07 EPHA6-TRMT10C 1 5 chr3:96987993:+ chr3:101564770:+ . NA TCGA-BH-A0HX-01A-21R-A056-07 HOOK3-MTFR1 4 11 chr8:42997637:+ chr8:65770947:+ INFRAME NA TCGA-BH-A0HX-01A-21R-A056-07 PCGF3-PIGG 3 9 chr4:731110:+ chr4:539153:+ . NA TCGA-BH-A0HX-01A-21R-A056-07 PLD3-EML2 1 5 chr19:40378223:+ chr19:45609788:- . NA TCGA-BH-A0HX-01A-21R-A056-07 PRKD2-CKM 1 5 chr19:46704169:- chr19:45311920:- INFRAME NA TCGA-BH-A0HY-01A-11R-A056-07 TENM4-INTS4 71 370 chr11:78889785:- chr11:77883952:- FRAMESHIFT NA TCGA-BH-A0HY-01A-11R-A056-07 ITPK1-ACO1 33 121 chr14:93115069:- chr9:32405485:+ . NA TCGA-BH-A0HY-01A-11R-A056-07 C17orf102-RARRES3 14 32 chr17:34579079:- chr11:63539516:+ . NA TCGA-BH-A0HY-01A-11R-A056-07 MARK2-RTN3 7 40 chr11:63905043:+ chr11:63713971:+ . NA TCGA-BH-A0HY-01A-11R-A056-07 CMSS1-XRRA1 6 17 chr3:99818043:+ chr11:74907273:- FRAMESHIFT NA TCGA-BH-A0HY-01A-11R-A056-07 TRERF1-VARS2 3 29 chr6:42356515:- chr6:30925544:+ . NA TCGA-BH-A0HY-01A-11R-A056-07 MAP4K5-NIN 3 15 chr14:50504800:- chr14:50738286:- FRAMESHIFT NA TCGA-BH-A0HY-01A-11R-A056-07 STIP1-P2RY6 2 12 chr11:64203622:+ chr11:73296485:+ . NA TCGA-BH-A0HY-01A-11R-A056-07 TICAM1-PTPRS 1 9 chr19:4831614:- chr19:5265196:- . NA TCGA-BH-A0HY-01A-11R-A056-07 STARD3-OMG 1 8 chr17:39637231:+ chr17:31296337:- . NA TCGA-BH-A0HY-01A-11R-A056-07 CACNB1-ARRB1 1 7 chr17:39186793:- chr11:75274211:- INFRAME NA TCGA-BH-A0HY-01A-11R-A056-07 EFHC1-ADGRL3 2 3 chr6:52424167:+ chr4:61497121:+ . NA TCGA-BH-A0HY-01A-11R-A056-07 TRERF1-PEX6 1 5 chr6:42451177:- chr6:42975038:- . NA TCGA-BH-A0HY-01A-11R-A056-07 AP3D1-ZNF682 1 4 chr19:2132471:- chr19:20007275:- FRAMESHIFT NA TCGA-BH-A0RX-01A-21R-A084-07 FAM192A-C16orf62 4 14 chr16:57186031:- chr16:19651976:+ . NA TCGA-BH-A0RX-01A-21R-A084-07 RPS27A-MS4A4A 2 17 chr2:55234962:+ chr11:60297197:+ INFRAME NA TCGA-BH-A0W3-01A-11R-A109-07 IGSF3-KDM2A 23 43 chr1:116666284:- chr11:67180079:+ FRAMESHIFT NA TCGA-BH-A0W3-01A-11R-A109-07 MAGI3-NOTCH2 10 13 chr1:113391349:+ chr1:119997332:- INFRAME NA TCGA-BH-A0W3-01A-11R-A109-07 FZD4-LAMTOR1 2 36 chr11:86954801:- chr11:72099256:- INFRAME NA TCGA-BH-A0W3-01A-11R-A109-07 LRP5-CASQ2 1 13 chr11:68357847:+ chr1:115744912:- FRAMESHIFT NA TCGA-BH-A0W7-01A-11R-A115-07 COG5-DPP6 2 20 chr7:107412502:- chr7:154727767:+ INFRAME NA TCGA-BH-A0W7-01A-11R-A115-07 MAP2K4-NIPSNAP1 2 3 chr17:12021001:+ chr22:29561862:- INFRAME Likely Oncogenic NA TCGA-BH-A0W7-01A-11R-A115-07 AP1B1-TTC28 1 6 chr22:29334265:- chr22:28297852:- FRAMESHIFT NA TCGA-BH-A0WA-01A-11R-A109-07 PRKAR1A-ZBTB20 5 10 chr17:68524958:+ chr3:115027574:- . NA TCGA-BH-A0WA-01A-11R-A109-07 UBA3-FRMD4B 2 15 chr3:69077798:- chr3:69176656:- FRAMESHIFT NA TCGA-BH-A0WA-01A-11R-A109-07 HSPD1-GPR1 2 3 chr2:197493324:- chr2:206177275:- . NA TCGA-BH-A0WA-01A-11R-A109-07 KLF3-SCFD2 1 7 chr4:38689879:+ chr4:53145582:- FRAMESHIFT NA TCGA-BH-A0WA-01A-11R-A109-07 C11orf49-RTN4 2 1 chr11:46936851:+ chr2:54974764:- FRAMESHIFT NA TCGA-BH-A0WA-01A-11R-A109-07 COL28A1-MTMR1 1 1 chr7:7452319:- chrX:150736595:+ INFRAME NA TCGA-BH-A18G-01A-11R-A12D-07 VWA8-RB1 2 3 chr13:41865736:- chr13:48342599:+ INFRAME Likely Oncogenic NA TCGA-BH-A18H-01A-11R-A12D-07 MAPKAPK5-GNPTAB 1 12 chr12:111866231:+ chr12:101790057:- FRAMESHIFT NA TCGA-BH-A18H-01A-11R-A12D-07 MAGI3-ATF6 2 7 chr1:113549631:+ chr1:161860207:+ FRAMESHIFT NA TCGA-BH-A18H-01A-11R-A12D-07 PPP1R12C-ZNF460 1 6 chr19:55103409:- chr19:57284551:+ FRAMESHIFT NA TCGA-BH-A18H-01A-11R-A12D-07 POR-MDH2 1 3 chr7:75915179:+ chr7:76054830:+ . NA TCGA-BH-A18I-01A-11R-A12D-07 FCHSD2-CPT1A 14 160 chr11:73083695:- chr11:68794911:- INFRAME NA TCGA-BH-A18I-01A-11R-A12D-07 ANO1-ENPP7P8 13 6 chr11:70088084:+ chr11:71780106:+ . NA TCGA-BH-A18I-01A-11R-A12D-07 BAG4-PLEKHA2 6 23 chr8:38207766:+ chr8:38917907:+ . NA TCGA-BH-A18I-01A-11R-A12D-07 NADSYN1-DLG2 1 3 chr11:71491903:+ chr11:85111735:- INFRAME NA TCGA-BH-A18J-01A-11R-A12D-07 NSL1-TMEM206 18 58 chr1:212782372:- chr1:212387100:- INFRAME NA TCGA-BH-A18J-01A-11R-A12D-07 PTPRF-LEFTY2 20 48 chr1:43553941:+ chr1:225940002:- INFRAME NA TCGA-BH-A18J-01A-11R-A12D-07 ZCCHC14-SNX7 11 53 chr16:87460008:- chr1:98760054:+ FRAMESHIFT NA TCGA-BH-A18J-01A-11R-A12D-07 KDM4A-CREB3L4 10 48 chr1:43668019:+ chr1:153972744:+ FRAMESHIFT NA TCGA-BH-A18J-01A-11R-A12D-07 KDM4A-DAP3P1 15 13 chr1:43668019:+ chr1:155586650:+ . NA TCGA-BH-A18J-01A-11R-A12D-07 VGLL4-SH3BP5 8 28 chr3:11702971:- chr3:15269877:- FRAMESHIFT NA TCGA-BH-A18J-01A-11R-A12D-07 LRRN2-CTSS 7 23 chr1:204685320:- chr1:150757980:- . NA TCGA-BH-A18J-01A-11R-A12D-07 HIVEP3-CREB3L4 3 17 chr1:41700916:- chr1:153973195:+ . NA TCGA-BH-A18J-01A-11R-A12D-07 CMC1-VPS37C 1 15 chr3:28241812:+ chr11:61138835:- . NA TCGA-BH-A18J-01A-11R-A12D-07 NR2C2-COLQ 4 3 chr3:14962492:+ chr3:15489637:- . NA TCGA-BH-A18J-01A-11R-A12D-07 NFYC-PLXNA2 3 3 chr1:40738948:+ chr1:208218002:- . NA TCGA-BH-A18J-01A-11R-A12D-07 KIAA0100-CYP4F23P 1 7 chr17:28628265:- chr19:15583350:+ . NA TCGA-BH-A18K-01A-11R-A12D-07 ZNF492-NLRP5 6 67 chr19:22634474:+ chr19:56038025:+ . NA TCGA-BH-A18L-01A-32R-A12D-07 PVT1-SLC30A8 209 1423 chr8:127794734:+ chr8:117152944:+ . NA TCGA-BH-A18L-01A-32R-A12D-07 MYSM1-APOM 56 107 chr1:58695129:- chr6:31656472:+ INFRAME NA TCGA-BH-A18L-01A-32R-A12D-07 MIR1204-SLC30A8 7 153 chr8:127796008:+ chr8:117157691:+ . NA TCGA-BH-A18L-01A-32R-A12D-07 TNS3-HSPA1L 5 21 chr7:47280164:- chr6:31811985:- . NA TCGA-BH-A18L-01A-32R-A12D-07 MSH2-TMEM247 4 4 chr2:47408555:+ chr2:46484244:+ INFRAME Likely Oncogenic NA TCGA-BH-A18L-01A-32R-A12D-07 LRP5-NOX4 3 6 chr11:68439916:+ chr11:89355043:- INFRAME NA TCGA-BH-A18L-01A-32R-A12D-07 PIAS2-IER3IP1 1 6 chr18:46890580:- chr18:47157537:- INFRAME NA TCGA-BH-A18P-01A-11R-A12D-07 SACM1L-ANAPC13 42 43 chr3:45689497:+ chr3:134482931:- . NA TCGA-BH-A18Q-01A-12R-A12D-07 KIAA0319L-PAGE2B 3 4 chr1:35554350:- chrX:55076034:+ . NA TCGA-BH-A18R-01A-11R-A12D-07 DCAF7-VMP1 125 413 chr17:63550815:+ chr17:59731421:+ . NA TCGA-BH-A18R-01A-11R-A12D-07 LUC7L3-C17orf64 132 205 chr17:50737026:+ chr17:60429362:+ FRAMESHIFT NA TCGA-BH-A18R-01A-11R-A12D-07 SLC35F2-CCDC162P 18 137 chr11:107858658:- chr6:109348427:+ . NA TCGA-BH-A18R-01A-11R-A12D-07 GOPC-ABLIM1 19 101 chr6:117578900:- chr10:114491878:- INFRAME NA TCGA-BH-A18R-01A-11R-A12D-07 PPM1D-CCND1 19 86 chr17:60648082:+ chr11:69652174:+ . Likely Oncogenic NA TCGA-BH-A18R-01A-11R-A12D-07 BCAS3-RNF169 22 50 chr17:60709325:+ chr11:74810184:+ INFRAME NA TCGA-BH-A18R-01A-11R-A12D-07 PGS1-KIF22 8 11 chr17:78378808:+ chr16:29796893:+ FRAMESHIFT NA TCGA-BH-A18R-01A-11R-A12D-07 YPEL2-PAK1 4 25 chr17:59397488:+ chr11:77336282:- . NA TCGA-BH-A18R-01A-11R-A12D-07 SUZ12P1-ORAOV1 2 27 chr17:30769965:+ chr11:69673321:- . NA TCGA-BH-A18R-01A-11R-A12D-07 BCAS3-SHANK2 3 20 chr17:60747279:+ chr11:70502931:- FRAMESHIFT NA TCGA-BH-A18R-01A-11R-A12D-07 HEATR6-PPME1 4 14 chr17:60047309:- chr11:74203728:+ FRAMESHIFT NA TCGA-BH-A18R-01A-11R-A12D-07 LRP5-DRAP1 3 5 chr11:68365700:+ chr11:65919782:+ INFRAME NA TCGA-BH-A18R-01A-11R-A12D-07 IQGAP3-SH2D2A 1 3 chr1:156556533:- chr1:156809807:- INFRAME NA TCGA-BH-A18R-01A-11R-A12D-07 GOLGA4-ANO1 1 2 chr3:37347296:+ chr11:70163283:+ FRAMESHIFT NA TCGA-BH-A18R-01A-11R-A12D-07 FBXL20-THRSP 1 1 chr17:39401361:- chr11:78067659:+ . NA TCGA-BH-A18R-01A-11R-A12D-07 FBXL20-TRIM49B 1 1 chr17:39401361:- chr11:49031596:+ . NA TCGA-BH-A18R-01A-11R-A12D-07 WIPF2-USP32 1000 1000 chr17:40219492:+ chr17:60345608:- . NA TCGA-BH-A18R-01A-11R-A12D-07 ALG8-USP32 1000 1000 chr11:78139494:- chr17:60345608:- FRAMESHIFT NA TCGA-BH-A18T-01A-11R-A12D-07 PVT1-POU5F1B 65 238 chr8:127794734:+ chr8:127414888:+ . NA TCGA-BH-A18T-01A-11R-A12D-07 ACTB-RNF216 27 337 chr7:5530524:- chr7:5716766:- . NA TCGA-BH-A18T-01A-11R-A12D-07 UBE2J2-GNB1 5 228 chr1:1267862:- chr1:1804581:- FRAMESHIFT NA TCGA-BH-A18T-01A-11R-A12D-07 MYO5B-DYM 13 26 chr18:50194767:- chr18:49118926:- INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 ARHGEF11-ETV3 6 37 chr1:157044299:- chr1:157136365:- . NA TCGA-BH-A18T-01A-11R-A12D-07 ZNF318-PDE3A 9 25 chr6:43342676:- chr12:20556660:+ INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 GPAT4-KCNB2 9 21 chr8:41578278:+ chr8:72935935:+ . NA TCGA-BH-A18T-01A-11R-A12D-07 C11orf80-BBS1 9 19 chr11:66759096:+ chr11:66526649:+ INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 WNK1-PRMT8 8 23 chr12:862270:+ chr12:3540606:+ INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 PDE4B-GADD45A 8 13 chr1:66368969:+ chr1:67686025:+ FRAMESHIFT NA TCGA-BH-A18T-01A-11R-A12D-07 STK10-SH3PXD2B 4 21 chr5:172156624:- chr5:172422496:- INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 CASP8-ALS2CR12 5 15 chr2:201266791:+ chr2:201330833:- INFRAME Likely Oncogenic NA TCGA-BH-A18T-01A-11R-A12D-07 MRPS35-PPFIBP1 6 9 chr12:27724186:+ chr12:27676428:+ INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 DTNB-RBKS 3 20 chr2:25576838:- chr2:27858571:- FRAMESHIFT NA TCGA-BH-A18T-01A-11R-A12D-07 POMK-NKAIN3 2 21 chr8:43103830:+ chr8:62579539:+ INFRAME NA TCGA-BH-A18T-01A-11R-A12D-07 ACO2-TEF 2 11 chr22:41469182:+ chr22:41387351:+ FRAMESHIFT NA TCGA-BH-A18T-01A-11R-A12D-07 ROPN1B-ALG1L 2 8 chr3:125977165:+ chr3:125933696:- FRAMESHIFT NA TCGA-BH-A18T-01A-11R-A12D-07 FGD1-PFKFB1 1 2 chrX:54495126:- chrX:54963382:- INFRAME NA TCGA-BH-A18U-01A-21R-A12D-07 NSD3-PSD3 100 311 chr8:38288487:- chr8:18655685:- INFRAME NA TCGA-BH-A18U-01A-21R-A12D-07 RAD54L2-ERC2 12 21 chr3:51541650:+ chr3:55511276:- . NA TCGA-BH-A18U-01A-21R-A12D-07 BZW2-CLCN3 4 15 chr7:16646288:+ chr4:169680050:+ . NA TCGA-BH-A18U-01A-21R-A12D-07 DIS3L2-UBE2E3 2 19 chr2:232300119:+ chr2:180984043:+ INFRAME NA TCGA-BH-A18U-01A-21R-A12D-07 CLSTN2-CCDC39 6 2 chr3:139935483:+ chr3:180847624:- . NA TCGA-BH-A18U-01A-21R-A12D-07 ADK-LRRTM3 2 14 chr10:74670269:+ chr10:67097587:+ FRAMESHIFT NA TCGA-BH-A18U-01A-21R-A12D-07 KDM4B-UBXN6 4 4 chr19:4969230:+ chr19:4447625:- . NA TCGA-BH-A18U-01A-21R-A12D-07 ZZEF1-CCDC144A 3 6 chr17:4024919:- chr17:16707469:+ FRAMESHIFT NA TCGA-BH-A18U-01A-21R-A12D-07 NOA1-SPINK2 1 13 chr4:56973148:- chr4:56820579:- FRAMESHIFT NA TCGA-BH-A18U-01A-21R-A12D-07 RHOT1-FGFR1 2 8 chr17:32142729:+ chr8:38457534:- FRAMESHIFT Likely Oncogenic NA TCGA-BH-A18U-01A-21R-A12D-07 MED20-RNF182 1 8 chr6:41909269:- chr6:13974210:+ . NA TCGA-BH-A18U-01A-21R-A12D-07 LARGE1-ATP6V1E1 2 3 chr22:33564848:- chr22:17613320:- FRAMESHIFT NA TCGA-BH-A18V-01A-11R-A12D-07 SARS-KIAA1324 32 153 chr1:109224048:+ chr1:109161894:+ INFRAME NA TCGA-BH-A18V-01A-11R-A12D-07 MVP-KIF22 23 57 chr16:29840459:+ chr16:29803449:+ INFRAME NA TCGA-BH-A18V-01A-11R-A12D-07 NRP2-PARD3B 20 53 chr2:205766803:+ chr2:205615456:+ FRAMESHIFT NA TCGA-BH-A18V-01A-11R-A12D-07 RUNX2-IFT88 13 47 chr6:45492114:+ chr13:20690705:+ INFRAME NA TCGA-BH-A18V-01A-11R-A12D-07 ESRP1-INTS8 7 59 chr8:94706034:+ chr8:94849941:+ . NA TCGA-BH-A18V-01A-11R-A12D-07 CP-SOX5 9 29 chr3:149221647:- chr12:23846193:- FRAMESHIFT NA TCGA-BH-A18V-01A-11R-A12D-07 PKM-TRPV3 8 12 chr15:72209673:- chr17:3535713:- INFRAME NA TCGA-BH-A18V-01A-11R-A12D-07 ACKR3-CASC4 4 5 chr2:236567841:+ chr15:44379690:+ . NA TCGA-BH-A18V-01A-11R-A12D-07 DDR2-GAB1 4 4 chr1:162719145:+ chr4:143415477:+ FRAMESHIFT NA TCGA-BH-A18V-01A-11R-A12D-07 EYA3-SUSD6 3 8 chr1:28035544:- chr14:69658513:+ . NA TCGA-BH-A18V-01A-11R-A12D-07 SAP30BP-MRPL58 3 8 chr17:75693482:+ chr17:75017078:+ FRAMESHIFT NA TCGA-BH-A18V-01A-11R-A12D-07 RUNX1-CLDN14 3 3 chr21:35580660:- chr21:36461776:- . Likely Oncogenic NA TCGA-BH-A18V-01A-11R-A12D-07 SNX18-WDR93 1 3 chr5:54519573:+ chr15:89727157:+ INFRAME NA TCGA-BH-A1EN-01A-11R-A13Q-07 EXT1-RSF1 11 33 chr8:117812872:- chr11:77740936:- INFRAME NA TCGA-BH-A1EN-01A-11R-A13Q-07 GAB2-ALG8 11 33 chr11:78417646:- chr11:78127436:- FRAMESHIFT NA TCGA-BH-A1EN-01A-11R-A13Q-07 CACNB1-EMSY 5 42 chr17:39187479:- chr11:76496215:+ FRAMESHIFT NA TCGA-BH-A1EN-01A-11R-A13Q-07 TENM4-RBM4 6 24 chr11:79064738:- chr11:66665856:+ INFRAME NA TCGA-BH-A1EN-01A-11R-A13Q-07 PC-THRSP 2 19 chr11:66952430:- chr11:78067659:+ . NA TCGA-BH-A1EN-01A-11R-A13Q-07 GRB7-ACTN3 3 12 chr17:39746202:+ chr11:66551239:+ INFRAME NA TCGA-BH-A1EN-01A-11R-A13Q-07 KCTD21-TENM4 3 8 chr11:78188573:- chr11:79065007:- . NA TCGA-BH-A1EN-01A-11R-A13Q-07 ACER3-PC 2 10 chr11:76959031:+ chr11:66853383:- INFRAME NA TCGA-BH-A1EN-01A-11R-A13Q-07 QSER1-DEPDC7 1 7 chr11:32893334:+ chr11:33025659:+ . NA TCGA-BH-A1EN-01A-11R-A13Q-07 COL14A1-PLEKHA2 1 2 chr8:120208361:+ chr8:38950850:+ FRAMESHIFT NA TCGA-BH-A1EO-01A-11R-A137-07 CEP170-PRKACB 1 21 chr1:243199060:- chr1:84179177:+ INFRAME NA TCGA-BH-A1EU-01A-11R-A137-07 DPYD-STAB2 5 20 chr1:97883264:- chr12:103660331:+ INFRAME NA TCGA-BH-A1EU-01A-11R-A137-07 EXOC4-ATM 2 3 chr7:134007835:+ chr11:108243953:+ FRAMESHIFT Likely Oncogenic NA TCGA-BH-A1EV-01A-11R-A137-07 FRS2-OSBPL8 15 58 chr12:69530960:+ chr12:76356728:- . NA TCGA-BH-A1EV-01A-11R-A137-07 TMBIM4-INO80 13 26 chr12:66169855:- chr15:41005687:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 SSH2-UST 6 26 chr17:29929938:- chr6:148941279:+ INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 USPL1-IGSF8 7 22 chr13:30631474:+ chr1:160094171:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 AIM1-STAT6 7 10 chr6:106361081:+ chr12:57098902:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 GNB1-KIFAP3 2 27 chr1:1804419:- chr1:170024596:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 KIRREL-RBP7 5 15 chr1:157993728:+ chr1:10015782:+ FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 SGCD-RARA 4 18 chr5:156595051:+ chr17:40348316:+ INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 FCGR2A-SPTA1 6 8 chr1:161506591:+ chr1:158662945:- FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 ETNK1-PPFIBP1 4 15 chr12:22625586:+ chr12:27646062:+ INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 ARHGAP23-NLK 5 3 chr17:38482678:+ chr17:28163543:+ FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 SPTA1-GRIP1 3 11 chr1:158661287:- chr12:66529914:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 COPA-CISD3 3 6 chr1:160323431:- chr17:38730760:+ FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 ATP1B1-ABCA13 1 10 chr1:169111498:+ chr7:48219354:+ FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 DDX52-TMIGD1 1 10 chr17:37642110:- chr17:30329529:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 CSMD2-IFI44L 2 5 chr1:33586504:- chr1:78637032:+ FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 TMEM106A-TUBD1 2 3 chr17:43217312:+ chr17:59886230:- FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 SYNJ2-MTUS2 1 5 chr6:158069673:+ chr13:29480150:+ FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 ST7L-CSMD2 1 3 chr1:112610841:- chr1:33587168:- INFRAME NA TCGA-BH-A1EV-01A-11R-A137-07 TIAM2-CDK12 1 3 chr6:154944206:+ chr17:39544249:+ . Likely Oncogenic NA TCGA-BH-A1EV-01A-11R-A137-07 TSPAN8-MGST1 1 3 chr12:71282716:- chr12:16589528:+ . NA TCGA-BH-A1EV-01A-11R-A137-07 FRS2-CLLU1OS 1 2 chr12:69569096:+ chr12:92422636:- FRAMESHIFT NA TCGA-BH-A1EV-01A-11R-A137-07 ERBB2-SRCIN1 1 1 chr17:39715939:+ chr17:38543136:- FRAMESHIFT NA TCGA-BH-A1EW-01A-11R-A137-07 CNOT2-PDE3A 13 4 chr12:70243480:+ chr12:20556660:+ . NA TCGA-BH-A1EW-01A-11R-A137-07 THAP2-GRIP1 1 6 chr12:71664580:+ chr12:66541950:- FRAMESHIFT NA TCGA-BH-A1EY-01A-11R-A13Q-07 UBL3-ZNF211 38 66 chr13:29849512:- chr19:57640704:+ FRAMESHIFT NA TCGA-BH-A1EY-01A-11R-A13Q-07 ADD3-XPNPEP1 20 31 chr10:110008299:+ chr10:109893075:- . NA TCGA-BH-A1EY-01A-11R-A13Q-07 ZNF552-UBL3 5 13 chr19:57813294:- chr13:29777263:- FRAMESHIFT NA TCGA-BH-A1EY-01A-11R-A13Q-07 DSCR3-BACH1 2 20 chr21:37267238:- chr21:29270357:+ . NA TCGA-BH-A1EY-01A-11R-A13Q-07 ADK-PI4K2A 3 14 chr10:74200838:+ chr10:97656285:+ FRAMESHIFT NA TCGA-BH-A1EY-01A-11R-A13Q-07 HLCS-IL10RB 3 13 chr21:36896860:- chr21:33288104:+ FRAMESHIFT NA TCGA-BH-A1EY-01A-11R-A13Q-07 PTTG1IP-SIM2 4 9 chr21:44873502:- chr21:36709168:+ INFRAME NA TCGA-BH-A1EY-01A-11R-A13Q-07 POFUT2-WDR4 1 11 chr21:45282349:- chr21:42855780:- FRAMESHIFT NA TCGA-BH-A1F0-01A-11R-A137-07 PTPRK-C6orf203 26 68 chr6:128520259:- chr6:107044260:+ FRAMESHIFT NA TCGA-BH-A1F0-01A-11R-A137-07 PTPRF-GUCA2A 23 72 chr1:43553941:+ chr1:42163610:- FRAMESHIFT NA TCGA-BH-A1F0-01A-11R-A137-07 CIC-ZFP57 12 17 chr19:42287240:+ chr6:29673758:- FRAMESHIFT Likely Oncogenic NA TCGA-BH-A1F0-01A-11R-A137-07 FAM117B-ATIC 6 13 chr2:202635788:+ chr2:215312498:+ INFRAME NA TCGA-BH-A1F0-01A-11R-A137-07 EGF-ENPEP 3 24 chr4:109913462:+ chr4:110488541:+ FRAMESHIFT NA TCGA-BH-A1F0-01A-11R-A137-07 HNRNPUL2-TTC9C 5 10 chr11:62726619:- chr11:62735382:+ INFRAME NA TCGA-BH-A1F0-01A-11R-A137-07 VPS13B-AHI1 4 14 chr8:99038566:+ chr6:135323324:- INFRAME NA TCGA-BH-A1F0-01A-11R-A137-07 TBC1D32-HBS1L 3 11 chr6:121279121:- chr6:134993875:- INFRAME NA TCGA-BH-A1F0-01A-11R-A137-07 PSME4-SLC22A16 4 3 chr2:53874339:- chr6:110457017:- FRAMESHIFT NA TCGA-BH-A1F0-01A-11R-A137-07 HIVEP3-ASCC3 2 10 chr1:41628749:- chr6:100607088:- . NA TCGA-BH-A1F0-01A-11R-A137-07 HBS1L-ARMC2 1 6 chr6:134997397:- chr6:108876143:+ INFRAME NA TCGA-BH-A1F0-01A-11R-A137-07 HPS3-JADE1 1 4 chr3:149129940:+ chr4:128831733:+ . NA TCGA-BH-A1F0-01A-11R-A137-07 PLCH1-SKIL 1 4 chr3:155704146:- chr3:170359699:+ . NA TCGA-BH-A1F2-01A-31R-A13Q-07 PIP4K2B-KPNB1 181 633 chr17:38767568:- chr17:47680020:+ . NA TCGA-BH-A1F2-01A-31R-A13Q-07 ADNP2-PQLC1 5 23 chr18:80117650:+ chr18:79943462:- INFRAME NA TCGA-BH-A1F2-01A-31R-A13Q-07 TEX2-GDPD1 5 9 chr17:64263168:- chr17:59245414:+ . NA TCGA-BH-A1F2-01A-31R-A13Q-07 EME1-ERBB2 1 3 chr17:50375512:+ chr17:39726562:+ INFRAME NA TCGA-BH-A1F2-01A-31R-A13Q-07 STXBP4-NIPA2 1 1 chr17:55081183:+ chr15:22858540:+ INFRAME NA TCGA-BH-A1F6-01A-11R-A13Q-07 GYS1-EML2 131 382 chr19:48982255:- chr19:45613671:- FRAMESHIFT NA TCGA-BH-A1F6-01A-11R-A13Q-07 SRPK2-PUS7 33 47 chr7:105388648:- chr7:105472193:- INFRAME NA TCGA-BH-A1F6-01A-11R-A13Q-07 PUM1-PTPRK 4 46 chr1:31006994:- chr6:128322310:- INFRAME NA TCGA-BH-A1F6-01A-11R-A13Q-07 TRIM4-TAF6 6 28 chr7:99903218:- chr7:100110073:- FRAMESHIFT NA TCGA-BH-A1F6-01A-11R-A13Q-07 SPTBN4-C19orf47 6 16 chr19:40520151:+ chr19:40336407:- FRAMESHIFT NA TCGA-BH-A1F6-01A-11R-A13Q-07 AURKB-MYH10 7 4 chr17:8210530:- chr17:8548787:- . NA TCGA-BH-A1F6-01A-11R-A13Q-07 LRRC37A3-GNA13 3 18 chr17:64918750:- chr17:65018303:- FRAMESHIFT NA TCGA-BH-A1F6-01A-11R-A13Q-07 PELI1-APLF 3 4 chr2:64144081:- chr2:68567341:+ . NA TCGA-BH-A1F6-01A-11R-A13Q-07 NOS1AP-DARS2 1 3 chr1:162154476:+ chr1:173826687:+ FRAMESHIFT NA TCGA-BH-A1F6-01A-11R-A13Q-07 XPNPEP3-SGSM3 1 3 chr22:40870139:+ chr22:40400696:+ . NA TCGA-BH-A1F6-01A-11R-A13Q-07 NECTIN4-PFDN2 1 2 chr1:161077453:- chr1:161100859:- FRAMESHIFT NA TCGA-BH-A1F6-01A-11R-A13Q-07 FAM208B-NET1 1 1 chr10:5685175:+ chr10:5426655:+ . NA TCGA-BH-A1F8-01A-11R-A13Q-07 GLG1-COG4 24 69 chr16:74606657:- chr16:70519731:- INFRAME NA TCGA-BH-A1FC-01A-11R-A13Q-07 PTBP2-KAZN 55 132 chr1:96723594:+ chr1:15034749:+ FRAMESHIFT NA TCGA-BH-A1FC-01A-11R-A13Q-07 RNF11-TMEM61 19 140 chr1:51236879:+ chr1:54991836:+ FRAMESHIFT NA TCGA-BH-A1FC-01A-11R-A13Q-07 PTPRU-IGHJ6 41 0 chr1:29320779:+ chr14:105863256:- INFRAME NA TCGA-BH-A1FC-01A-11R-A13Q-07 FAF1-NFIA 10 12 chr1:50959767:- chr1:61352450:+ FRAMESHIFT NA TCGA-BH-A1FC-01A-11R-A13Q-07 ST3GAL3-TAL1 5 21 chr1:43838311:+ chr1:47220174:- FRAMESHIFT NA TCGA-BH-A1FC-01A-11R-A13Q-07 CACHD1-CLIC4 4 14 chr1:64470942:+ chr1:24797742:+ INFRAME NA TCGA-BH-A1FC-01A-11R-A13Q-07 ALG14-C1orf194 4 7 chr1:95027129:- chr1:109106659:- INFRAME NA TCGA-BH-A1FC-01A-11R-A13Q-07 KAZN-ST3GAL3 1 16 chr1:14960875:+ chr1:43894383:+ INFRAME NA TCGA-BH-A1FC-01A-11R-A13Q-07 RALGAPB-RPRD1B 2 10 chr20:38516370:+ chr20:38066081:+ INFRAME NA TCGA-BH-A1FC-01A-11R-A13Q-07 SRPK2-PUS7 2 8 chr7:105388648:- chr7:105508544:- . NA TCGA-BH-A1FC-01A-11R-A13Q-07 KLF16-RNF126 2 3 chr19:1863041:- chr19:652884:- FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 SYTL2-TMEM135 18 71 chr11:85757625:- chr11:87295782:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 DYRK1A-MRPS6 17 61 chr21:37486614:+ chr21:34125341:+ FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 GTF2B-KYAT3 13 73 chr1:88887261:- chr1:88936245:- FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 COLGALT1-BISPR 17 41 chr19:17560465:+ chr19:17414391:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 MKNK2-ZFR2 15 23 chr19:2046367:- chr19:3852614:- FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 MCPH1-COLEC10 8 45 chr8:6414883:+ chr8:119089680:+ FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 NSD2-TACC3 9 38 chr4:1904378:+ chr4:1740826:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 SUSD4-RYR2 9 22 chr1:223363278:- chr1:237500711:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 CDK7-CCNB1 4 40 chr5:69235453:+ chr5:69167908:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 RP1-EIF3H 9 20 chr8:54559320:+ chr8:116658980:- . NA TCGA-BH-A1FD-01A-11R-A13Q-07 GOLGA7-PVT1 10 12 chr8:41490965:+ chr8:127989162:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 RNF19A-RIDA 8 12 chr8:100313291:- chr8:98108751:- . NA TCGA-BH-A1FD-01A-11R-A13Q-07 NCSTN-ATP1A4 4 16 chr1:160344826:+ chr1:160176092:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 PVT1-KHDRBS3 2 24 chr8:127890998:+ chr8:135646993:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 VPS13B-EFR3A 3 16 chr8:99193057:+ chr8:131940499:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 ERBIN-PPWD1 4 10 chr5:65926806:+ chr5:65576879:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 NIPAL2-RNF19A 1 22 chr8:98203108:- chr8:100313372:- . NA TCGA-BH-A1FD-01A-11R-A13Q-07 ALDOA-ASPHD1 2 15 chr16:30067661:+ chr16:29919531:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 UTRN-PARK2 4 7 chr6:144730486:+ chr6:162262765:- FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 NCL-ARMC9 1 17 chr2:231482684:- chr2:231331793:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 ZNF542P-NLRP8 2 13 chr19:56373623:+ chr19:55979394:+ . NA TCGA-BH-A1FD-01A-11R-A13Q-07 COLGALT1-MVB12A 2 12 chr19:17560465:+ chr19:17420313:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 PANK1-C8orf34 2 8 chr10:89643697:- chr8:68708994:+ FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 CD83-LAMA2 2 7 chr6:14118065:+ chr6:129342343:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 ACTR1A-ARL3 1 9 chr10:102502600:- chr10:102676941:- INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 BMPR2-FAM117B 1 6 chr2:202377550:+ chr2:202724917:+ FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 UBE2K-KLB 1 6 chr4:39774933:+ chr4:39434210:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 CTU2-MLYCD 2 1 chr16:88712905:+ chr16:83912218:+ FRAMESHIFT NA TCGA-BH-A1FD-01A-11R-A13Q-07 NOP58-KIAA2012 1 5 chr2:202278002:+ chr2:202125214:+ INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 ASXL1-XKR7 1 4 chr20:32369123:+ chr20:31995068:+ FRAMESHIFT Likely Oncogenic NA TCGA-BH-A1FD-01A-11R-A13Q-07 PPIP5K1-FRMD5 2 0 chr15:43576371:- chr15:43924309:- INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 LARP4B-ADARB2 1 3 chr10:842932:- chr10:1217119:- INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 SYNE1-RGS17 1 2 chr6:152301869:- chr6:153011762:- INFRAME NA TCGA-BH-A1FD-01A-11R-A13Q-07 WASF2-FGR 1 2 chr1:27428761:- chr1:27613350:- INFRAME NA TCGA-BH-A1FE-01A-11R-A13Q-07 PMEPA1-PIGP 42 95 chr20:57709474:- chr21:37072537:- FRAMESHIFT NA TCGA-BH-A1FE-01A-11R-A13Q-07 LDLR-TNPO2 9 52 chr19:11129670:+ chr19:12723937:- . NA TCGA-BH-A1FE-01A-11R-A13Q-07 PDSS2-SMARCA4 4 66 chr6:107458990:- chr19:10984124:+ . Likely Oncogenic NA TCGA-BH-A1FE-01A-11R-A13Q-07 PTK2-NCR3 7 18 chr8:140818277:- chr6:31592914:- . NA TCGA-BH-A1FE-01A-11R-A13Q-07 SEC63-SCML4 3 22 chr6:107957886:- chr6:107749813:- FRAMESHIFT NA TCGA-BH-A1FE-01A-11R-A13Q-07 POLR3E-RMI2 2 22 chr16:22332185:+ chr16:11350642:+ INFRAME NA TCGA-BH-A1FE-01A-11R-A13Q-07 C6orf203-BEND3 5 9 chr6:107040230:+ chr6:107070950:- FRAMESHIFT NA TCGA-BH-A1FE-01A-11R-A13Q-07 FOXP1-C5orf51 3 6 chr3:71299820:- chr5:41907736:+ . Likely Oncogenic NA TCGA-BH-A1FE-01A-11R-A13Q-07 NIN-NEMF 2 7 chr14:50806737:- chr14:49825955:- FRAMESHIFT NA TCGA-BH-A1FE-01A-11R-A13Q-07 STON2-TJP2 3 3 chr14:81427102:- chr9:69212548:+ . NA TCGA-BH-A1FE-01A-11R-A13Q-07 SCML4-TUSC3 2 3 chr6:107772172:- chr8:15623080:+ INFRAME NA TCGA-BH-A1FG-01A-11R-A13Q-07 MPC1-PXT1 1 5 chr6:166382806:- chr6:36391874:- FRAMESHIFT NA TCGA-BH-A1FH-01A-12R-A13Q-07 KIF16B-PLCB1 9 51 chr20:16573229:- chr20:8684932:+ FRAMESHIFT NA TCGA-BH-A1FH-01A-12R-A13Q-07 FAM104A-SLC39A11 6 20 chr17:73227165:- chr17:73031714:- INFRAME NA TCGA-BH-A1FH-01A-12R-A13Q-07 OLA1-METTL8 3 5 chr2:174223033:- chr2:171360513:- FRAMESHIFT NA TCGA-BH-A1FH-01A-12R-A13Q-07 PLCB4-BMP2 1 4 chr20:9068903:+ chr20:6770120:+ . NA TCGA-BH-A1FH-01A-12R-A13Q-07 KANSL3-KCNIP3 1 3 chr2:96619359:- chr2:95298683:+ . NA TCGA-BH-A1FL-01A-11R-A13Q-07 DLG1-TM4SF19 25 50 chr3:197282679:- chr3:196327591:- . NA TCGA-BH-A1FL-01A-11R-A13Q-07 ANXA10-FAM198B 1 4 chr4:168128165:+ chr4:158131012:- FRAMESHIFT NA TCGA-BH-A1FM-01A-11R-A13Q-07 ZBTB43-PITPNC1 83 159 chr9:126808915:+ chr17:67532802:+ . NA TCGA-BH-A1FM-01A-11R-A13Q-07 CCNK-CCDC171 8 64 chr14:99503644:+ chr9:15920270:+ FRAMESHIFT NA TCGA-BH-A1FM-01A-11R-A13Q-07 KANSL1-DYNLL2 6 40 chr17:46223671:- chr17:58087082:+ . NA TCGA-BH-A1FM-01A-11R-A13Q-07 WIPI1-MRPL45P2 10 23 chr17:68433470:- chr17:47456795:- . NA TCGA-BH-A1FM-01A-11R-A13Q-07 KCNJ3-GALNT13 7 15 chr2:154709819:+ chr2:154395991:+ INFRAME NA TCGA-BH-A1FM-01A-11R-A13Q-07 SRSF1-SKA2 6 10 chr17:58006944:- chr17:59112345:- INFRAME NA TCGA-BH-A1FM-01A-11R-A13Q-07 TUBD1-HEATR6 4 17 chr17:59890831:- chr17:60050977:- FRAMESHIFT NA TCGA-BH-A1FM-01A-11R-A13Q-07 ASXL1-PDRG1 3 13 chr20:32369123:+ chr20:31948882:- FRAMESHIFT Likely Oncogenic NA TCGA-BH-A1FM-01A-11R-A13Q-07 MED13-ABCA9 3 10 chr17:61961588:- chr17:69029227:- FRAMESHIFT NA TCGA-BH-A1FM-01A-11R-A13Q-07 CACNG4-BPTF 4 4 chr17:66965131:+ chr17:67891844:+ INFRAME NA TCGA-BH-A1FM-01A-11R-A13Q-07 HNRNPC-TTC39B 3 8 chr14:21210247:- chr9:15192695:- . NA TCGA-BH-A1FM-01A-11R-A13Q-07 MIR181A2HG-MAPKAP1 3 8 chr9:124658741:+ chr9:125672643:- . NA TCGA-BH-A1FM-01A-11R-A13Q-07 PITPNC1-EXOC3L4 3 5 chr17:67632238:+ chr14:103100204:+ . NA TCGA-BH-A1FM-01A-11R-A13Q-07 TTC39B-SPTSSA 1 10 chr9:15182307:- chr14:34435304:- INFRAME NA TCGA-BH-A1FM-01A-11R-A13Q-07 C20orf196-CST4 2 5 chr20:5756848:+ chr20:23685977:- FRAMESHIFT NA TCGA-BH-A1FM-01A-11R-A13Q-07 ZNF839-LMX1B 2 2 chr14:102317666:+ chr9:126690836:+ . NA TCGA-BH-A1FM-01A-11R-A13Q-07 ADAMTS2-OXCT1 2 1 chr5:179152142:- chr5:41739491:- INFRAME NA TCGA-BH-A1FN-01A-11R-A13Q-07 NAP1L1-STK38L 15 25 chr12:76084567:- chr12:27297710:+ . NA TCGA-BH-A1FN-01A-11R-A13Q-07 DLG5-ANAPC16 3 12 chr10:77926217:- chr10:72230366:+ INFRAME NA TCGA-BH-A1FN-01A-11R-A13Q-07 USP42-SLC46A2 2 9 chr7:6115523:+ chr9:112887413:- INFRAME NA TCGA-BH-A1FN-01A-11R-A13Q-07 P4HA1-ANK3 2 5 chr10:73072029:- chr10:60279639:- FRAMESHIFT NA TCGA-BH-A1FN-01A-11R-A13Q-07 TBC1D9-MAML3 2 3 chr4:140701504:- chr4:139890967:- FRAMESHIFT NA TCGA-BH-A1FU-01A-11R-A14D-07 TOM1L2-PEMT 5 3 chr17:17866296:- chr17:17512654:- FRAMESHIFT NA TCGA-BH-A1FU-01A-11R-A14D-07 PCLAF-TRIP4 2 8 chr15:64380958:- chr15:64406330:+ INFRAME NA TCGA-BH-A1FU-01A-11R-A14D-07 DCAF12-KIF24 1 4 chr9:34093286:- chr9:34263172:- FRAMESHIFT NA TCGA-BH-A201-01A-11R-A14M-07 SYTL2-CHRM1 23 343 chr11:85700515:- chr11:62911178:- . NA TCGA-BH-A201-01A-11R-A14M-07 PCF11-KDM2A 41 126 chr11:83157631:+ chr11:67207510:+ FRAMESHIFT NA TCGA-BH-A201-01A-11R-A14M-07 FCHSD2-RNF169 12 44 chr11:72902543:- chr11:74789626:+ FRAMESHIFT NA TCGA-BH-A201-01A-11R-A14M-07 MRPL48-TPCN2 6 47 chr11:73787992:+ chr11:69135435:+ FRAMESHIFT NA TCGA-BH-A201-01A-11R-A14M-07 PAK1-MYO7A 7 17 chr11:77473552:- chr11:77130589:+ . NA TCGA-BH-A201-01A-11R-A14M-07 NEU3-SNTG1 5 11 chr11:75005625:+ chr8:50590879:+ INFRAME NA TCGA-BH-A202-01A-11R-A14M-07 KAT6A-MSR1 24 91 chr8:42048378:- chr8:16177992:- FRAMESHIFT NA TCGA-BH-A202-01A-11R-A14M-07 PLXDC1-STAC2 1 14 chr17:39151362:- chr17:39218173:- FRAMESHIFT NA TCGA-BH-A203-01A-12R-A169-07 RFWD2-KIF14 3 251 chr1:176149006:- chr1:200608928:- INFRAME NA TCGA-BH-A203-01A-12R-A169-07 HDAC2-TRDN 27 48 chr6:113970857:- chr6:123224131:- INFRAME NA TCGA-BH-A203-01A-12R-A169-07 NBPF17P-FMN2 18 43 chr1:143635509:- chr1:240355816:+ . NA TCGA-BH-A203-01A-12R-A169-07 FIG4-WASF1 14 20 chr6:109777060:+ chr6:110103557:- INFRAME NA TCGA-BH-A203-01A-12R-A169-07 PLCB1-GPCPD1 15 12 chr20:8150371:+ chr20:5604440:- . NA TCGA-BH-A203-01A-12R-A169-07 TIMM17A-RASSF5 8 25 chr1:201957574:+ chr1:206538172:+ INFRAME NA TCGA-BH-A203-01A-12R-A169-07 ADSS-SERTAD4 4 37 chr1:244420170:- chr1:210237944:+ . NA TCGA-BH-A203-01A-12R-A169-07 RPS6KC1-C1orf101 3 27 chr1:213104569:+ chr1:244552322:+ FRAMESHIFT NA TCGA-BH-A203-01A-12R-A169-07 TRPS1-PDE4DIP 7 7 chr8:115587001:- chr1:148968836:+ INFRAME NA TCGA-BH-A203-01A-12R-A169-07 PLCB1-TRMT6 1 21 chr20:8729174:+ chr20:5941139:- FRAMESHIFT NA TCGA-BH-A203-01A-12R-A169-07 FERMT1-RBBP8 1 14 chr20:6094939:- chr18:23026143:+ FRAMESHIFT NA TCGA-BH-A203-01A-12R-A169-07 MRPS21-CA14 3 6 chr1:150294449:+ chr1:150264593:+ INFRAME NA TCGA-BH-A203-01A-12R-A169-07 NCOA2-NCALD 2 5 chr8:70213903:- chr8:101719648:- . NA TCGA-BH-A203-01A-12R-A169-07 ATAD2-FAM178B 1 5 chr8:123333878:- chr2:96929320:- INFRAME NA TCGA-BH-A203-01A-12R-A169-07 GINS2-EMC8 1 4 chr16:85681582:- chr16:85771891:- . NA TCGA-BH-A203-01A-12R-A169-07 GRHL2-SNAP25 1 3 chr8:101599151:+ chr20:10275429:+ . NA TCGA-BH-A203-01A-12R-A169-07 RBM8A-FCAMR 1 2 chr1:145925863:- chr1:206959797:- . NA TCGA-BH-A203-01A-12R-A169-07 FXR1-ZFYVE16 1 1 chr3:180912736:+ chr5:80472761:+ FRAMESHIFT NA TCGA-BH-A203-01A-12R-A169-07 PDE4DIP-C1orf186 1000 1000 chr1:148969030:+ chr1:206101752:+ INFRAME NA TCGA-BH-A204-01A-11R-A157-07 RNF122-NEGR1 7 63 chr8:33566699:- chr1:71407570:- INFRAME NA TCGA-BH-A208-01A-11R-A157-07 CELSR2-SARS 16 44 chr1:109273670:+ chr1:109237731:+ FRAMESHIFT NA TCGA-BH-A208-01A-11R-A157-07 OSBPL3-GABRG3 1 6 chr7:24979886:- chr15:27480650:+ . NA TCGA-BH-A209-01A-11R-A157-07 TTC39A-CRISP1 37 528 chr1:51294391:- chr6:49852129:- INFRAME NA TCGA-BH-A209-01A-11R-A157-07 PDS5B-UBR2 107 111 chr13:32586593:+ chr6:42691032:+ . NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGA10 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGA11 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGA12 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGA8 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGA9 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGB5 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGB6 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGB7 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGC3 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGC4 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ANKHD1-PCDHGC5 23 87 chr5:140487060:+ chr5:141505393:+ FRAMESHIFT NA TCGA-BH-A209-01A-11R-A157-07 ZNF791-FGFR1 4 63 chr19:12619320:+ chr8:38418356:- . Likely Oncogenic NA TCGA-BH-A209-01A-11R-A157-07 FAF1-LRRC7 2 18 chr1:50857929:- chr1:69792043:+ INFRAME NA TCGA-BH-A209-01A-11R-A157-07 SRBD1-PLEKHA6 1 15 chr2:45553623:- chr1:204274809:- INFRAME NA TCGA-BH-A28Q-01A-11R-A16F-07 TMEM109-CD5 7 29 chr11:60914268:+ chr11:61115056:+ . NA TCGA-BH-A42U-01A-12R-A24H-07 PLEKHS1-PDCD4 2 1 chr10:113769900:+ chr10:110885253:+ INFRAME NA TCGA-BH-A42V-01A-11R-A24H-07 ZNF473-NUP62 2 1 chr19:50031091:+ chr19:49909884:- . NA TCGA-BH-A5IZ-01A-11R-A27Q-07 SRPK1-DDAH1 23 56 chr6:35869010:- chr1:85358847:- INFRAME NA TCGA-BH-A5IZ-01A-11R-A27Q-07 DMTN-SFTPC 12 38 chr8:22049224:+ chr8:22159475:+ . NA TCGA-BH-A5IZ-01A-11R-A27Q-07 LARP4-RYR3 6 20 chr12:50401028:+ chr15:33736235:+ FRAMESHIFT NA TCGA-BH-A5IZ-01A-11R-A27Q-07 RYR3-LARP4 2 18 chr15:33742444:+ chr12:50427762:+ INFRAME NA TCGA-BH-A5J0-01A-11R-A27Q-07 RAB10-NCOA1 3 12 chr2:26034735:+ chr2:24643966:+ . NA TCGA-BH-A5J0-01A-11R-A27Q-07 BRE-HADHB 1 13 chr2:27988087:+ chr2:26254247:+ . NA TCGA-BH-A5J0-01A-11R-A27Q-07 MRPL33-HADHB 1 13 chr2:27988087:+ chr2:26254247:+ . NA TCGA-BH-A5J0-01A-11R-A27Q-07 NCOA1-CENPA 2 2 chr2:24683128:+ chr2:26792131:+ INFRAME NA TCGA-BH-A6R9-01A-21R-A32P-07 SPARC-COL3A1 1 9 chr5:151666373:- chr2:188988081:+ FRAMESHIFT NA TCGA-BH-A8FY-01A-11R-A36F-07 PBXIP1-ACBD6 10 13 chr1:154956069:- chr1:180314722:- . NA TCGA-BH-A8FY-01A-11R-A36F-07 ARHGEF11-ALDH9A1 5 13 chr1:157044299:- chr1:165695397:- FRAMESHIFT NA TCGA-BH-A8FY-01A-11R-A36F-07 NOS1AP-DCAF6 3 13 chr1:162154476:+ chr1:168043025:+ FRAMESHIFT NA TCGA-BH-A8FZ-01A-11R-A352-07 DANT2-NXF3 2 16 chrX:115968961:- chrX:103084883:- . NA TCGA-C8-A12K-01A-21R-A115-07 MIB2-SMIM13 9 73 chr1:1616614:+ chr6:11134403:+ FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 SHANK2-C7orf57 8 34 chr11:71056481:- chr7:48060226:+ FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 ARID4B-CARD10 11 19 chr1:235148404:- chr22:37504769:- . NA TCGA-C8-A12K-01A-21R-A115-07 RBM34-CARD10 11 19 chr1:235148404:- chr22:37504769:- FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 RRBP1-RBBP8 4 30 chr20:17679999:- chr18:22911600:+ . NA TCGA-C8-A12K-01A-21R-A115-07 PCMTD1-ST18 5 17 chr8:51860845:- chr8:52149977:- FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 TGIF2-DLGAP4 2 15 chr20:36578966:+ chr20:36439754:+ INFRAME NA TCGA-C8-A12K-01A-21R-A115-07 UCKL1-TXN 4 7 chr20:63956260:- chr9:110251462:- FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 KIAA0922-MND1 3 10 chr4:153604430:+ chr4:153394262:+ FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 CUTC-C19orf57 2 10 chr10:99754634:+ chr19:13892890:- FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 NVL-WDR26 2 9 chr1:224311800:- chr1:224386502:- . NA TCGA-C8-A12K-01A-21R-A115-07 SMIM13-MIB2 2 9 chr6:11094389:+ chr1:1616508:+ FRAMESHIFT NA TCGA-C8-A12K-01A-21R-A115-07 RHOG-NUP98 2 8 chr11:3840894:- chr11:3735324:- . NA TCGA-C8-A12K-01A-21R-A115-07 ANKRD54-C22orf23 1 11 chr22:37838500:- chr22:37953158:- . NA TCGA-C8-A12K-01A-21R-A115-07 FAM208B-NET1 2 6 chr10:5761471:+ chr10:5456588:+ INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 ALCAM-EIF2A 28 114 chr3:105367481:+ chr3:150552356:+ INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 MFSD12-RPL36 24 80 chr19:3547272:- chr19:5690031:+ . NA TCGA-C8-A12L-01A-11R-A115-07 RYBP-TADA3 19 74 chr3:72446496:- chr3:9791493:- . Likely Oncogenic NA TCGA-C8-A12L-01A-11R-A115-07 MAP2K7-SH3GL1 8 57 chr19:7905855:+ chr19:4361796:- INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 RPL36-MFSD12 6 56 chr19:5690327:+ chr19:3544939:- . NA TCGA-C8-A12L-01A-11R-A115-07 TAF15-MAN1A2 12 31 chr17:35842459:+ chr1:117493147:+ INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 PTRH2-DHX40P1 11 13 chr17:59707371:- chr17:59976770:- . NA TCGA-C8-A12L-01A-11R-A115-07 KIAA1109-ADGRA3 5 36 chr4:122339408:+ chr4:22392690:- INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 CDC5L-SPATS1 6 24 chr6:44419597:+ chr6:44376358:+ INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 LONP1-MAP2K7 7 20 chr19:5719704:- chr19:7909755:+ FRAMESHIFT NA TCGA-C8-A12L-01A-11R-A115-07 ESRRG-ADCY10 2 24 chr1:216865061:- chr1:167824855:- . NA TCGA-C8-A12L-01A-11R-A115-07 PTGFRN-NOTCH2 6 6 chr1:116949572:+ chr1:119969744:- INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 IGSF3-TBX15 3 15 chr1:116599941:- chr1:118914179:- FRAMESHIFT NA TCGA-C8-A12L-01A-11R-A115-07 PRPF18-CACNB2 3 15 chr10:13605744:+ chr10:18150883:+ INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 PRKDC-DEFB103B 1 22 chr8:47849154:- chr8:7429129:- FRAMESHIFT NA TCGA-C8-A12L-01A-11R-A115-07 RALGPS1-MVB12B 4 8 chr9:127069356:+ chr9:126503177:+ FRAMESHIFT NA TCGA-C8-A12L-01A-11R-A115-07 LRRC8E-MFSD12 3 8 chr19:7900935:+ chr19:3546168:- . NA TCGA-C8-A12L-01A-11R-A115-07 C9orf3-PTPDC1 3 4 chr9:94760580:+ chr9:94064734:+ . NA TCGA-C8-A12L-01A-11R-A115-07 CHD6-EFCAB11 1 9 chr20:41533050:- chr14:89797324:- INFRAME NA TCGA-C8-A12L-01A-11R-A115-07 FOXK1-SDK1 2 5 chr7:4682868:+ chr7:4208099:+ FRAMESHIFT NA TCGA-C8-A12L-01A-11R-A115-07 SH3BP4-PGK1 1 1 chr2:235035120:+ chrX:78123195:+ FRAMESHIFT NA TCGA-C8-A12M-01A-11R-A115-07 CANT1-FBXL20 18 116 chr17:79005372:- chr17:39303639:- . NA TCGA-C8-A12M-01A-11R-A115-07 CORO1C-C12orf42 10 93 chr12:108678272:- chr12:103277210:- FRAMESHIFT NA TCGA-C8-A12M-01A-11R-A115-07 SYNRG-TUBD1 10 89 chr17:37576341:- chr17:59866749:- INFRAME NA TCGA-C8-A12M-01A-11R-A115-07 DDX5-EFCAB3 7 78 chr17:64503803:- chr17:62352933:+ . NA TCGA-C8-A12M-01A-11R-A115-07 FRS2-TSPAN8 3 93 chr12:69470530:+ chr12:71157787:- . NA TCGA-C8-A12M-01A-11R-A115-07 HECTD4-SRRM4 9 7 chr12:112167317:- chr12:119116937:+ FRAMESHIFT NA TCGA-C8-A12M-01A-11R-A115-07 PPM1E-VMP1 7 15 chr17:58756461:+ chr17:59808796:+ INFRAME NA TCGA-C8-A12M-01A-11R-A115-07 CDK12-AKAP1 4 16 chr17:39471763:+ chr17:57110025:+ FRAMESHIFT Likely Oncogenic NA TCGA-C8-A12M-01A-11R-A115-07 ATG16L2-AKAP17A 2 13 chr11:72827293:+ chrY:1593444:+ . NA TCGA-C8-A12M-01A-11R-A115-07 SYNRG-MSI2 4 4 chr17:37570908:- chr17:57406898:+ . NA TCGA-C8-A12M-01A-11R-A115-07 MED13L-RNFT2 2 11 chr12:116096669:- chr12:116766814:+ FRAMESHIFT NA TCGA-C8-A12M-01A-11R-A115-07 MED13L-FRG1GP 2 9 chr12:116237468:- chr22:12624242:+ . NA TCGA-C8-A12M-01A-11R-A115-07 ZMYM2-MTMR6 1 9 chr13:19960026:+ chr13:25267941:- . NA TCGA-C8-A12M-01A-11R-A115-07 PVT1-PHF20L1 1 6 chr8:127890998:+ chr8:132777792:+ . NA TCGA-C8-A12M-01A-11R-A115-07 MSI2-TRIM25 1 5 chr17:57262192:+ chr17:56908563:- INFRAME NA TCGA-C8-A12M-01A-11R-A115-07 RPTOR-ANKFN1 1 5 chr17:80545791:+ chr17:56326221:+ FRAMESHIFT NA TCGA-C8-A12O-01A-11R-A115-07 NADSYN1-SHANK2 2 13 chr11:71491903:+ chr11:70896567:- INFRAME NA TCGA-C8-A12P-01A-11R-A115-07 ANXA2-RNF114 630 2102 chr15:60351193:- chr20:49949248:+ INFRAME NA TCGA-C8-A12P-01A-11R-A115-07 ERC1-TOMM34 29 78 chr12:1408247:+ chr20:44943579:- FRAMESHIFT NA TCGA-C8-A12P-01A-11R-A115-07 WIPF2-IKZF3 19 93 chr17:40265146:+ chr17:39792933:- INFRAME NA TCGA-C8-A12P-01A-11R-A115-07 NR2F2-MSI2 16 89 chr15:96326352:+ chr17:57529676:+ FRAMESHIFT NA TCGA-C8-A12P-01A-11R-A115-07 BPTF-PIP4K2B 11 96 chr17:67826337:+ chr17:38786920:- FRAMESHIFT NA TCGA-C8-A12P-01A-11R-A115-07 ZFPM2-KB-1562D12.1 14 68 chr8:105444381:+ chr8:101461617:- . NA TCGA-C8-A12P-01A-11R-A115-07 PSMD12-PRKCA 14 35 chr17:67344606:- chr17:66496201:+ FRAMESHIFT NA TCGA-C8-A12P-01A-11R-A115-07 CYB561-GNA13 16 24 chr17:63446245:- chr17:65053728:- . NA TCGA-C8-A12P-01A-11R-A115-07 ROCK1-ABHD3 11 32 chr18:21110818:- chr18:21703747:- INFRAME NA TCGA-C8-A12P-01A-11R-A115-07 MAPK6-USO1 11 27 chr15:52019376:+ chr4:75810432:+ . NA TCGA-C8-A12P-01A-11R-A115-07 TMED3-PCMTD2 8 30 chr15:79413557:+ chr20:64267887:+ . NA TCGA-C8-A12P-01A-11R-A115-07 MED13-TEX2 5 31 chr17:61987007:- chr17:64214242:- . NA TCGA-C8-A12P-01A-11R-A115-07 STARD3-CASC3 7 8 chr17:39637231:+ chr17:40161753:+ . NA TCGA-C8-A12P-01A-11R-A115-07 ZNF345-HSF2BP 6 10 chr19:36850968:+ chr21:43592328:- . NA TCGA-C8-A12P-01A-11R-A115-07 BACH2-IGHM 6 4 chr6:90296480:- chr14:105856217:- . NA TCGA-C8-A12P-01A-11R-A115-07 ZNF585A-GRAMD1A 2 14 chr19:37165595:- chr19:35013541:+ . NA TCGA-C8-A12P-01A-11R-A115-07 TOMM34-ERC1 3 5 chr20:44951833:- chr12:1444562:+ FRAMESHIFT NA TCGA-C8-A12P-01A-11R-A115-07 FGF13-NEUROD2 3 3 chrX:138857512:- chr17:39608065:- . NA TCGA-C8-A12P-01A-11R-A115-07 ZFP41-ANGPT1 2 6 chr8:143251340:+ chr8:107322128:- . NA TCGA-C8-A12P-01A-11R-A115-07 PRMT2-DPF1 1 5 chr21:46636990:+ chr19:38222708:- FRAMESHIFT NA TCGA-C8-A12P-01A-11R-A115-07 BCAS3-BRIP1 1 4 chr17:60947352:+ chr17:61801474:- INFRAME Likely Oncogenic NA TCGA-C8-A12P-01A-11R-A115-07 TMEM131-FAM178B 1 4 chr2:97792386:- chr2:96947902:- FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 EFHD1-EIF4E2 163 399 chr2:232672443:+ chr2:232566829:+ INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 GFM1-MLF1 124 177 chr3:158666386:+ chr3:158592434:+ INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 ZNF717-TMEM254 22 64 chr3:75783306:- chr10:80081841:+ INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 EPS15L1-CLNS1A 17 55 chr19:16441892:- chr11:77619695:- FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 RPRD2-SHC1 10 61 chr1:150364919:+ chr1:154966517:- FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 RAD9A-KDM2A 10 45 chr11:67393790:+ chr11:67257484:+ . NA TCGA-C8-A12Q-01A-11R-A115-07 ACTR3B-PTPRN2 16 18 chr7:152825122:+ chr7:157595315:- INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 BCR-MRVI1 10 42 chr22:23182239:+ chr11:10652182:- INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 SYT12-C11orf80 8 45 chr11:67034838:+ chr11:66838370:+ INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 RAB38-CA10 7 38 chr11:88175183:- chr17:52072393:- INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 USP39-DNAH6 10 5 chr2:85630946:+ chr2:84718204:+ FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 RNF169-CBX1 5 23 chr11:74817714:+ chr17:48077041:- . NA TCGA-C8-A12Q-01A-11R-A115-07 PNCK-HCFC1 2 27 chrX:153687431:- chrX:153964726:- . NA TCGA-C8-A12Q-01A-11R-A115-07 CKS1B-SHC1 4 13 chr1:154974804:+ chr1:154966517:- INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 SHC1-RPRD2 3 16 chr1:154974248:- chr1:150417596:+ . NA TCGA-C8-A12Q-01A-11R-A115-07 RAD9A-IKZF3 5 6 chr11:67321333:+ chr17:39832151:- . NA TCGA-C8-A12Q-01A-11R-A115-07 MCM9-FAM184A 4 8 chr6:118894027:- chr6:119016944:- . NA TCGA-C8-A12Q-01A-11R-A115-07 APPL1-SPATA12 3 11 chr3:57253738:+ chr3:57073366:+ . NA TCGA-C8-A12Q-01A-11R-A115-07 ACOT7-KLHL21 4 4 chr1:6318492:- chr1:6595557:- FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 GALNT18-PPP1R1B 3 7 chr11:11621359:- chr17:39629170:+ FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 CYP4Z2P-TRABD2B 3 6 chr1:46898843:- chr1:47801619:- . NA TCGA-C8-A12Q-01A-11R-A115-07 NDUFA10-COPS9 2 9 chr2:240005210:- chr2:240134005:- FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 DCAKD-PLCD3 2 5 chr17:45060888:- chr17:45121372:- . NA TCGA-C8-A12Q-01A-11R-A115-07 NRDC-USP24 2 5 chr1:51878275:- chr1:55107430:- FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 CORO1B-ERBB2 1 8 chr11:67440118:- chr17:39711928:+ FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 TERF2-COG4 2 4 chr16:69384580:- chr16:70490392:- INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 EEF2K-VWA3A 2 2 chr16:22273750:+ chr16:22144247:+ FRAMESHIFT NA TCGA-C8-A12Q-01A-11R-A115-07 GNAS-RTFDC1 1 4 chr20:58895684:+ chr20:56484111:+ INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 PUM1-NKAIN1 1 3 chr1:30950133:- chr1:31188187:- INFRAME NA TCGA-C8-A12Q-01A-11R-A115-07 CASZ1-SRM 1 2 chr1:10693874:- chr1:11059345:- INFRAME NA TCGA-C8-A12T-01A-11R-A115-07 ZNF341-DYNLRB1 22 133 chr20:33757322:+ chr20:34540581:+ INFRAME NA TCGA-C8-A12T-01A-11R-A115-07 RBL1-NDRG3 19 44 chr20:37022650:- chr20:36707007:- INFRAME NA TCGA-C8-A12T-01A-11R-A115-07 GABPB1-GALK2 8 46 chr15:50354985:- chr15:49319604:+ . NA TCGA-C8-A12T-01A-11R-A115-07 NPEPPS-GNGT2 1000 1000 chr17:47569494:+ chr17:49203032:- INFRAME NA TCGA-C8-A12U-01A-11R-A115-07 EXOC2-SH3RF3 14 19 chr6:693019:- chr2:109347674:+ . NA TCGA-C8-A12U-01A-11R-A115-07 HSD17B7-NPHP1 3 44 chr1:162792862:+ chr2:110169998:- INFRAME NA TCGA-C8-A12U-01A-11R-A115-07 TMEM136-POU2F3 7 18 chr11:120327640:+ chr11:120269210:+ INFRAME NA TCGA-C8-A12U-01A-11R-A115-07 GRHL2-TRAPPC9 5 17 chr8:101599151:+ chr8:139910300:- FRAMESHIFT NA TCGA-C8-A12U-01A-11R-A115-07 RANBP2-BMP5 4 17 chr2:108755259:+ chr6:55794427:- FRAMESHIFT NA TCGA-C8-A12U-01A-11R-A115-07 NPHP1-DDR2 3 8 chr2:110201421:- chr1:162783797:+ . NA TCGA-C8-A12U-01A-11R-A115-07 FAM19A2-KCNMB4 3 4 chr12:62023652:- chr12:70430485:+ . NA TCGA-C8-A12U-01A-11R-A115-07 RANBP9-TPMT 1 8 chr6:13710935:- chr6:18149171:- . NA TCGA-C8-A12U-01A-11R-A115-07 GBA2-ATP6V1C1 1 6 chr9:35748346:- chr8:103048870:+ INFRAME NA TCGA-C8-A12U-01A-11R-A115-07 SAMD12-ATAD2 1 2 chr8:118580715:- chr8:123380677:- INFRAME NA TCGA-C8-A12V-01A-11R-A115-07 SEPT9-MRPL38 16 251 chr17:77307200:+ chr17:75899574:- . NA TCGA-C8-A12V-01A-11R-A115-07 ARID1A-THBS3 24 66 chr1:26732792:+ chr1:155203137:- INFRAME Likely Oncogenic NA TCGA-C8-A12V-01A-11R-A115-07 PDHX-EIF3M 7 18 chr11:34957583:+ chr11:32600689:+ FRAMESHIFT NA TCGA-C8-A12V-01A-11R-A115-07 TNS2-ACVR1B 4 7 chr12:53051963:+ chr12:51985192:+ INFRAME NA TCGA-C8-A12V-01A-11R-A115-07 RAB27A-NEDD4 1 9 chr15:55270165:- chr15:55874008:- . NA TCGA-C8-A12V-01A-11R-A115-07 RSBN1L-DTNBP1 1 8 chr7:77697055:+ chr6:15652140:- FRAMESHIFT NA TCGA-C8-A12W-01A-11R-A115-07 PI4KA-FAM19A5 5 11 chr22:20793193:- chr22:48707717:+ FRAMESHIFT NA TCGA-C8-A12W-01A-11R-A115-07 TTC33-ADAM19 2 7 chr5:40746798:- chr5:157537991:- INFRAME NA TCGA-C8-A12W-01A-11R-A115-07 ANKRD17-GC 2 5 chr4:73135117:- chr4:71765643:- INFRAME NA TCGA-C8-A12W-01A-11R-A115-07 RBM23-SLC7A8 2 5 chr14:22918999:- chr14:23166540:- . NA TCGA-C8-A12W-01A-11R-A115-07 TRAPPC10-SOGA1 2 5 chr21:44094233:+ chr20:36839441:- INFRAME NA TCGA-C8-A12W-01A-11R-A115-07 TRPC4AP-PLCG1 1 8 chr20:35035123:- chr20:41196677:+ . NA TCGA-C8-A12W-01A-11R-A115-07 LRR1-KCNH5 1 5 chr14:49599203:+ chr14:63006472:- FRAMESHIFT NA TCGA-C8-A12W-01A-11R-A115-07 RNF185-SFI1 1 5 chr22:31160303:+ chr22:31546861:+ . NA TCGA-C8-A12Y-01A-11R-A12D-07 MBNL1-NAALADL2 3 3 chr3:152300367:+ chr3:174737641:+ . NA TCGA-C8-A12Y-01A-11R-A12D-07 ZNF721-FASN 2 1 chr4:473981:- chr17:82081843:- FRAMESHIFT NA TCGA-C8-A12Z-01A-11R-A115-07 PVT1-SLC30A8 15 147 chr8:127794734:+ chr8:117146819:+ . NA TCGA-C8-A12Z-01A-11R-A115-07 ATF7-SPATS2 8 51 chr12:53552541:- chr12:49496833:+ INFRAME NA TCGA-C8-A12Z-01A-11R-A115-07 SLC39A6-TBX15 7 20 chr18:36129114:- chr1:118899125:- . NA TCGA-C8-A12Z-01A-11R-A115-07 FBXL20-FBXO47 7 19 chr17:39282729:- chr17:38963051:- . NA TCGA-C8-A12Z-01A-11R-A115-07 ERBB2-PPP1R1B 1 22 chr17:39715939:+ chr17:39633883:+ INFRAME NA TCGA-C8-A12Z-01A-11R-A115-07 CPQ-OC90 1 9 chr8:96645402:+ chr8:132055073:- . NA TCGA-C8-A12Z-01A-11R-A115-07 RAF1-SSUH2 1 6 chr3:12663813:- chr3:8742602:- . Likely Oncogenic NA TCGA-C8-A12Z-01A-11R-A115-07 NAGLU-FBXL20 1 1 chr17:42538755:+ chr17:39275100:- FRAMESHIFT NA TCGA-C8-A130-01A-31R-A115-07 DYRK1A-ZBTB46 16 56 chr21:37472880:+ chr20:63790790:- . NA TCGA-C8-A130-01A-31R-A115-07 DSCR3-MACROD2 2 15 chr21:37267238:- chr20:16041201:+ FRAMESHIFT NA TCGA-C8-A130-01A-31R-A115-07 TMCO3-KATNAL2 2 10 chr13:113539507:+ chr18:47046457:+ FRAMESHIFT NA TCGA-C8-A130-01A-31R-A115-07 C5-RUVBL1 1 5 chr9:120953730:- chr3:128082574:- FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 WIPF2-IL2RB 261 749 chr17:40219492:+ chr22:37144205:- . NA TCGA-C8-A132-01A-31R-A115-07 PSMD2-ECE2 18 97 chr3:184304391:+ chr3:184287837:+ INFRAME NA TCGA-C8-A132-01A-31R-A115-07 TCTA-ARIH2 23 56 chr3:49413110:+ chr3:48981660:+ FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 MLLT3-CISD3 22 49 chr9:20620654:- chr17:38730760:+ FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 ERBB2-ABI3 15 74 chr17:39725853:+ chr17:49216531:+ FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 ATXN2-GIT2 13 21 chr12:111552280:- chr12:109967503:- INFRAME NA TCGA-C8-A132-01A-31R-A115-07 TMPRSS6-EME1 5 17 chr22:37089578:- chr17:50378595:+ FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 FAM177A1-IQSEC3 1 30 chr14:35077216:+ chr12:161926:+ INFRAME NA TCGA-C8-A132-01A-31R-A115-07 ABI3-STARD3 1 19 chr17:49219953:+ chr17:39653481:+ . NA TCGA-C8-A132-01A-31R-A115-07 MED26-CERS1 3 11 chr19:16627872:- chr19:18884267:- FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 MED26-GDF1 3 11 chr19:16627872:- chr19:18884267:- . NA TCGA-C8-A132-01A-31R-A115-07 MIPOL1-CASC3 1 17 chr14:37227838:+ chr17:40161753:+ . NA TCGA-C8-A132-01A-31R-A115-07 PIP4K2B-MLLT6 3 9 chr17:38777687:- chr17:38719517:+ FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 DDX31-AK8 1 9 chr9:132625664:- chr9:132727534:- FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 MED1-MRPL45 2 5 chr17:39443550:- chr17:38298449:+ FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 PSMB3-FAM117A 1 9 chr17:38755990:+ chr17:49732720:- FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 RAPGEFL1-IKZF3 2 4 chr17:40190762:+ chr17:39792933:- FRAMESHIFT NA TCGA-C8-A132-01A-31R-A115-07 MED1-NGFR 1 2 chr17:39447798:- chr17:49502063:+ INFRAME NA TCGA-C8-A132-01A-31R-A115-07 WIPF2-GRB7 1 1 chr17:40219492:+ chr17:39744886:+ . NA TCGA-C8-A134-01A-11R-A115-07 MRPS28-HIST1H2AC 22 99 chr8:80002999:- chr6:26138054:+ . NA TCGA-C8-A134-01A-11R-A115-07 RBL1-CPNE1 17 65 chr20:37095773:- chr20:35632923:- INFRAME NA TCGA-C8-A134-01A-11R-A115-07 BRE-PRKCE 11 29 chr2:28045799:+ chr2:46086208:+ INFRAME NA TCGA-C8-A134-01A-11R-A115-07 RHOBTB1-ATP6V1C2 6 20 chr10:60941804:- chr2:10768719:+ . NA TCGA-C8-A134-01A-11R-A115-07 TRNAU1AP-RCC1 4 21 chr1:28567413:+ chr1:28535050:+ FRAMESHIFT NA TCGA-C8-A134-01A-11R-A115-07 ACSS2-GSS 3 19 chr20:34914437:+ chr20:34928951:- FRAMESHIFT NA TCGA-C8-A134-01A-11R-A115-07 IQCB1-RUVBL1 3 13 chr3:121826051:- chr3:128065220:- INFRAME NA TCGA-C8-A134-01A-11R-A115-07 LAMB1-PARP14 1 1 chr7:107994887:- chr3:122727812:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 PIK3R3-LRRC41 41 121 chr1:46080642:- chr1:46267677:- INFRAME Likely Oncogenic NA TCGA-C8-A135-01A-11R-A115-07 CANT1-PSMD3 28 89 chr17:79009664:- chr17:39984294:+ . NA TCGA-C8-A135-01A-11R-A115-07 STARD3-IKZF3 20 64 chr17:39637231:+ chr17:39757965:- . NA TCGA-C8-A135-01A-11R-A115-07 TMX2-C11orf80 9 42 chr11:57712807:+ chr11:66796281:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 PACS1-ZDHHC24 6 50 chr11:66070842:+ chr11:66543981:- INFRAME NA TCGA-C8-A135-01A-11R-A115-07 VASP-EXOC3L2 7 24 chr19:45507776:+ chr19:45218319:- FRAMESHIFT NA TCGA-C8-A135-01A-11R-A115-07 CNKSR1-MAN1C1 6 16 chr1:26184612:+ chr1:25771657:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 STK24-RUNX1 4 22 chr13:98519243:- chr21:35580929:- . Likely Oncogenic NA TCGA-C8-A135-01A-11R-A115-07 FXR1-RIMS2 5 12 chr3:180933386:+ chr8:104068512:+ FRAMESHIFT NA TCGA-C8-A135-01A-11R-A115-07 TET3-C2orf78 5 12 chr2:74048411:+ chr2:73813477:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 C19orf47-BLVRB 4 15 chr19:40322028:- chr19:40458545:- INFRAME NA TCGA-C8-A135-01A-11R-A115-07 ENDOV-SLC26A11 1 20 chr17:80415610:+ chr17:80236928:+ . NA TCGA-C8-A135-01A-11R-A115-07 INTS5-SYT12 4 7 chr11:62653170:- chr11:67021869:+ . NA TCGA-C8-A135-01A-11R-A115-07 CACNB1-PPP4C 2 11 chr17:39183713:- chr16:30083394:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 NUP214-TOM1L2 3 7 chr9:131197416:+ chr17:17907531:- INFRAME NA TCGA-C8-A135-01A-11R-A115-07 PHF3-NUS1 2 9 chr6:63646795:+ chr6:117693042:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 ADCY9-PAM16 2 7 chr16:4113750:- chr16:4331774:- INFRAME NA TCGA-C8-A135-01A-11R-A115-07 EXD3-ZMYND19 3 2 chr9:137423114:- chr9:137588718:- . NA TCGA-C8-A135-01A-11R-A115-07 PTRH2-STXBP4 2 4 chr17:59707371:- chr17:55141310:+ . NA TCGA-C8-A135-01A-11R-A115-07 ZNF3-GATS 1 8 chr7:100081635:- chr7:100233674:- . NA TCGA-C8-A135-01A-11R-A115-07 FBXL20-CANT1 1 5 chr17:39343180:- chr17:78997963:- . NA TCGA-C8-A135-01A-11R-A115-07 MSI2-PPM1E 1 5 chr17:57262192:+ chr17:58955649:+ FRAMESHIFT NA TCGA-C8-A135-01A-11R-A115-07 USP32-TANC2 1 4 chr17:60222409:- chr17:63151270:+ FRAMESHIFT NA TCGA-C8-A135-01A-11R-A115-07 LUC7L3-MPRIP 1 3 chr17:50719831:+ chr17:17075710:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 PEMT-PRKCA 1 3 chr17:17576920:- chr17:66641355:+ INFRAME NA TCGA-C8-A135-01A-11R-A115-07 TTC28-ASCC2 1 2 chr22:28296198:- chr22:29790548:- INFRAME NA TCGA-C8-A137-01A-11R-A115-07 MTG1-ZNF511 30 101 chr10:133402773:+ chr10:133312788:+ INFRAME NA TCGA-C8-A137-01A-11R-A115-07 PREP-AIM1 23 52 chr6:105281746:- chr6:106555768:+ INFRAME NA TCGA-C8-A137-01A-11R-A115-07 ZNF592-ZSCAN2 8 15 chr15:84782814:+ chr15:84620602:+ INFRAME NA TCGA-C8-A137-01A-11R-A115-07 UBTD2-SH3PXD2B 4 10 chr5:172234122:- chr5:172382127:- FRAMESHIFT NA TCGA-C8-A137-01A-11R-A115-07 DCAF6-MPZL1 1 4 chr1:167951861:+ chr1:167765583:+ FRAMESHIFT NA TCGA-C8-A138-01A-11R-A115-07 CPT1A-MYEOV 10 22 chr11:68841775:- chr11:69341510:+ . NA TCGA-C8-A138-01A-11R-A115-07 TRAM1-CLVS1 6 15 chr8:70600019:- chr8:61376605:+ FRAMESHIFT NA TCGA-C8-A138-01A-11R-A115-07 EDEM2-NOL4L 3 23 chr20:35137880:- chr20:32548886:- . NA TCGA-C8-A138-01A-11R-A115-07 ATP6V1H-CHD7 4 4 chr8:53841578:- chr8:60781000:+ FRAMESHIFT NA TCGA-C8-A138-01A-11R-A115-07 RIN1-RHOD 2 5 chr11:66336317:- chr11:67065896:+ FRAMESHIFT NA TCGA-C8-A138-01A-11R-A115-07 C17orf62-ABCA7 2 1 chr17:82450700:- chr19:1048895:+ . NA TCGA-C8-A1HE-01A-11R-A13Q-07 ARHGAP32-MIR4300HG 4 24 chr11:129123446:- chr11:82673187:- . NA TCGA-C8-A1HG-01A-11R-A137-07 ZNF610-IGKJ4 22 0 chr19:52336445:+ chr2:88860915:- . NA TCGA-C8-A1HG-01A-11R-A137-07 HECTD2-PCGF5 7 11 chr10:91425410:+ chr10:91261326:+ FRAMESHIFT NA TCGA-C8-A1HG-01A-11R-A137-07 LRRC1-FRY 1 6 chr6:53795415:+ chr13:32131672:+ FRAMESHIFT NA TCGA-C8-A1HG-01A-11R-A137-07 TM9SF1-TSSK4 1 2 chr14:24195346:- chr14:24207964:+ . NA TCGA-C8-A1HI-01A-11R-A137-07 GGA3-SMIM5 81 51 chr17:75261548:- chr17:75634034:+ . NA TCGA-C8-A1HI-01A-11R-A137-07 TRPM7-TMEM104 9 44 chr15:50657781:- chr17:74835927:+ FRAMESHIFT NA TCGA-C8-A1HI-01A-11R-A137-07 RMDN3-SKA2 6 53 chr15:40751426:- chr17:59112345:- INFRAME NA TCGA-C8-A1HI-01A-11R-A137-07 ARPP19-MYO5A 4 24 chr15:52568848:- chr15:52323444:- INFRAME NA TCGA-C8-A1HI-01A-11R-A137-07 SKA2-SPDYE22P 3 28 chr17:59154956:- chr17:59175127:- . NA TCGA-C8-A1HI-01A-11R-A137-07 MEIS2-MYO5A 4 5 chr15:37036814:- chr15:52372363:- INFRAME NA TCGA-C8-A1HI-01A-11R-A137-07 TNRC6C-SCAPER 2 6 chr17:78051448:+ chr15:76404679:- FRAMESHIFT NA TCGA-C8-A1HI-01A-11R-A137-07 ATP8B4-DPH6 2 3 chr15:50038768:- chr15:35381916:- FRAMESHIFT NA TCGA-C8-A1HI-01A-11R-A137-07 INO80-PRKCA 1 3 chr15:41079701:- chr17:66732688:+ INFRAME NA TCGA-C8-A1HJ-01A-11R-A13Q-07 LRP8-SLC1A7 2 3 chr1:53280587:- chr1:53134429:- FRAMESHIFT NA TCGA-C8-A1HJ-01A-11R-A13Q-07 SYNE1-CACNA1C 1 3 chr6:152293588:- chr12:2668933:+ INFRAME NA TCGA-C8-A1HK-01A-21R-A13Q-07 PPP6R3-SSH2 32 84 chr11:68554257:+ chr17:29703062:- INFRAME NA TCGA-C8-A1HK-01A-21R-A13Q-07 PSMD3-OR7E126P 26 59 chr17:39984484:+ chr11:71903246:+ . NA TCGA-C8-A1HK-01A-21R-A13Q-07 ANO1-ABHD15 17 49 chr11:70182686:+ chr17:29563086:- INFRAME NA TCGA-C8-A1HK-01A-21R-A13Q-07 GLTSCR1L-CYB5R4 6 14 chr6:42823003:+ chr6:83934595:+ FRAMESHIFT NA TCGA-C8-A1HK-01A-21R-A13Q-07 ZNF207-PPP6R3 5 18 chr17:32350352:+ chr11:68548067:+ . NA TCGA-C8-A1HK-01A-21R-A13Q-07 POLA2-PPFIA1 3 16 chr11:65279626:+ chr11:70354301:+ INFRAME NA TCGA-C8-A1HK-01A-21R-A13Q-07 APP-RAB11FIP4 1 6 chr21:25905024:- chr17:31431813:+ FRAMESHIFT NA TCGA-C8-A1HL-01A-11R-A137-07 APPBP2-DNAH17 4 6 chr17:60525794:- chr17:78441199:- FRAMESHIFT NA TCGA-C8-A1HM-01A-12R-A137-07 TRIM24-SVOPL 33 136 chr7:138573642:+ chr7:138596530:- FRAMESHIFT NA TCGA-C8-A1HM-01A-12R-A137-07 FAM222B-BPTF 4 21 chr17:28790378:- chr17:67959541:+ . NA TCGA-C8-A1HM-01A-12R-A137-07 ERVK3-1-KCNMA1 5 11 chr19:58306216:+ chr10:77039637:- . NA TCGA-C8-A1HM-01A-12R-A137-07 CREB3L2-SHANK2 2 8 chr7:138001604:- chr11:70502931:- INFRAME NA TCGA-C8-A1HM-01A-12R-A137-07 SMURF2P1-B4GALNT2 2 5 chr17:30600916:+ chr17:49141247:+ . NA TCGA-C8-A1HN-01A-11R-A137-07 ARMC1-RB1CC1 29 69 chr8:65622263:- chr8:52634968:- INFRAME NA TCGA-C8-A1HN-01A-11R-A137-07 LEMD3-XPOT 13 91 chr12:65218619:+ chr12:64439244:+ INFRAME NA TCGA-C8-A1HN-01A-11R-A137-07 DOCK1-PCDH15 12 50 chr10:127381368:+ chr10:54527877:- FRAMESHIFT NA TCGA-C8-A1HN-01A-11R-A137-07 TAOK1-ZNF207 11 52 chr17:29544075:+ chr17:32381303:+ . NA TCGA-C8-A1HN-01A-11R-A137-07 ANKRD17-RPRD1B 5 28 chr4:73113792:- chr20:38066081:+ FRAMESHIFT NA TCGA-C8-A1HN-01A-11R-A137-07 PTPN1-SLC9A8 4 31 chr20:50510590:+ chr20:49864728:+ . NA TCGA-C8-A1HN-01A-11R-A137-07 RPRD1B-ANKRD17 5 24 chr20:38066256:+ chr4:73098520:- FRAMESHIFT NA TCGA-C8-A1HN-01A-11R-A137-07 LRBA-ESF1 3 23 chr4:150798081:- chr20:13718984:- FRAMESHIFT NA TCGA-C8-A1HN-01A-11R-A137-07 DYNLRB1-ERGIC3 5 12 chr20:34526343:+ chr20:35542323:+ INFRAME NA TCGA-C8-A1HN-01A-11R-A137-07 CTNNBL1-TTI1 4 14 chr20:37694152:+ chr20:38013857:- . NA TCGA-C8-A1HN-01A-11R-A137-07 DSTN-TCFL5 4 14 chr20:17570211:+ chr20:62842097:- INFRAME NA TCGA-C8-A1HN-01A-11R-A137-07 COX18-INPP4B 3 13 chr4:73065250:- chr4:142462726:- . Likely Oncogenic NA TCGA-C8-A1HN-01A-11R-A137-07 EIF4EBP1-ADAM12 2 13 chr8:38030718:+ chr10:126046132:- FRAMESHIFT NA TCGA-C8-A1HN-01A-11R-A137-07 OVOL2-KIAA0922 2 12 chr20:18056657:- chr4:153632718:+ FRAMESHIFT NA TCGA-C8-A1HN-01A-11R-A137-07 MACROD2-DCLK2 2 5 chr20:14002404:+ chr4:150102478:+ INFRAME NA TCGA-C8-A1HN-01A-11R-A137-07 LMBR1-TPRG1 1 4 chr7:156796389:- chr3:189238733:+ FRAMESHIFT NA TCGA-C8-A1HO-01A-11R-A13Q-07 GPR158-MYO16 69 85 chr10:25176322:+ chr13:108992376:+ INFRAME NA TCGA-C8-A1HO-01A-11R-A13Q-07 FGFR1-TACC1 8 59 chr8:38418228:- chr8:38788704:+ INFRAME Oncogenic NA TCGA-C8-A1HO-01A-11R-A13Q-07 CALCOCO2-ARSG 14 0 chr17:48831078:+ chr17:68420189:+ . NA TCGA-C8-A1HO-01A-11R-A13Q-07 AXIN2-LRRC37A3 9 15 chr17:65541455:- chr17:64855889:- INFRAME Likely Oncogenic NA TCGA-C8-A1HO-01A-11R-A13Q-07 TEX2-TANC2 3 17 chr17:64212574:- chr17:63237814:+ INFRAME NA TCGA-C8-A1HO-01A-11R-A13Q-07 NSD3-TACC1 2 16 chr8:38381799:- chr8:38788704:+ . NA TCGA-C8-A1HO-01A-11R-A13Q-07 GNPTAB-USP36 5 3 chr12:101764202:- chr17:78787658:- . NA TCGA-C8-A1HO-01A-11R-A13Q-07 DECR1-FAM110B 1 11 chr8:90021056:+ chr8:58145907:+ . NA TCGA-C8-A1HO-01A-11R-A13Q-07 DUSP14-PHB 1 10 chr17:37489958:+ chr17:49409473:- . NA TCGA-C8-A1HO-01A-11R-A13Q-07 ANKRD17-KCNIP4 3 1 chr4:73113792:- chr4:20734735:- INFRAME NA TCGA-C8-A1HO-01A-11R-A13Q-07 CCDC148-WDSUB1 2 5 chr2:158309433:- chr2:159236190:- FRAMESHIFT NA TCGA-C8-A1HO-01A-11R-A13Q-07 FOXK2-PITPNC1 1 9 chr17:82587272:+ chr17:67669508:+ FRAMESHIFT NA TCGA-C8-A1HO-01A-11R-A13Q-07 FCHSD2-RALYL 1 7 chr11:72984088:- chr8:84920894:+ INFRAME NA TCGA-C8-A1HO-01A-11R-A13Q-07 GRB2-TEX14 2 3 chr17:75405489:- chr17:58630554:- . NA TCGA-C8-A26V-01A-11R-A16F-07 TXNDC16-GPR137C 9 18 chr14:52470037:- chr14:52632160:+ FRAMESHIFT NA TCGA-C8-A26V-01A-11R-A16F-07 ERO1A-TXNDC16 3 12 chr14:52695368:- chr14:52470680:- FRAMESHIFT NA TCGA-C8-A26V-01A-11R-A16F-07 COG6-MAPK8 2 12 chr13:39660881:+ chr10:48431193:+ FRAMESHIFT NA TCGA-C8-A26V-01A-11R-A16F-07 MPPE1-PIEZO2 3 2 chr18:11889387:- chr18:10871415:- INFRAME NA TCGA-C8-A26V-01A-11R-A16F-07 CADM2-FHIT 2 5 chr3:85802196:+ chr3:60536979:- . NA TCGA-C8-A26V-01A-11R-A16F-07 ERO1A-GPR137C 2 4 chr14:52695368:- chr14:52632160:+ INFRAME NA TCGA-C8-A26W-01A-11R-A16F-07 ITGB6-BAZ2B 120 253 chr2:160107679:- chr2:159478721:- . NA TCGA-C8-A26W-01A-11R-A16F-07 PIP4K2B-TMEM99 12 37 chr17:38777687:- chr17:40833115:+ . NA TCGA-C8-A26W-01A-11R-A16F-07 TAOK1-YWHAEP7 9 30 chr17:29530619:+ chr17:37855229:- . NA TCGA-C8-A26W-01A-11R-A16F-07 UBE2D2-PAIP1 6 13 chr5:139561815:+ chr5:43555999:- FRAMESHIFT NA TCGA-C8-A26W-01A-11R-A16F-07 PKN1-LDLR 2 16 chr19:14446561:+ chr19:11116859:+ INFRAME NA TCGA-C8-A26W-01A-11R-A16F-07 PAK2-PIGX 4 6 chr3:196740157:+ chr3:196716858:+ . NA TCGA-C8-A26X-01A-31R-A16F-07 NFIX-DAND5 37 66 chr19:13090390:+ chr19:12973389:+ INFRAME NA TCGA-C8-A26X-01A-31R-A16F-07 NLK-BCAS3 20 17 chr17:28168657:+ chr17:60989971:+ INFRAME NA TCGA-C8-A26X-01A-31R-A16F-07 BSDC1-YARS 13 40 chr1:32386779:- chr1:32811057:- INFRAME NA TCGA-C8-A26X-01A-31R-A16F-07 JDP2-VRTN 13 29 chr14:75461530:+ chr14:74356783:+ . NA TCGA-C8-A26X-01A-31R-A16F-07 TBL1XR1-PIK3CA 12 12 chr3:177197121:- chr3:179198750:+ . NA TCGA-C8-A26X-01A-31R-A16F-07 RBM28-KMT2C 2 50 chr7:128321266:- chr7:152185631:- FRAMESHIFT Likely Oncogenic NA TCGA-C8-A26X-01A-31R-A16F-07 MLLT6-ACE 4 34 chr17:38712014:+ chr17:63496394:+ FRAMESHIFT NA TCGA-C8-A26X-01A-31R-A16F-07 ITGB4-SLC16A5 9 11 chr17:75751111:+ chr17:75098038:+ INFRAME NA TCGA-C8-A26X-01A-31R-A16F-07 STK11-GPX4 4 24 chr19:1222006:+ chr19:1105186:+ INFRAME Likely Oncogenic NA TCGA-C8-A26X-01A-31R-A16F-07 CLTC-PRR11 4 11 chr17:59620173:+ chr17:59169748:+ FRAMESHIFT NA TCGA-C8-A26X-01A-31R-A16F-07 INPP5B-SF3A3 4 5 chr1:37931673:- chr1:37960175:- INFRAME NA TCGA-C8-A26X-01A-31R-A16F-07 BLVRA-STK17A 2 3 chr7:43803847:+ chr7:43595901:+ INFRAME NA TCGA-C8-A26X-01A-31R-A16F-07 ODF2-SLC27A4 1 4 chr9:128469353:+ chr9:128343127:+ FRAMESHIFT NA TCGA-C8-A26Y-01A-11R-A16F-07 SREBF2-FMNL2 11 54 chr22:41894937:+ chr2:152607339:+ FRAMESHIFT NA TCGA-C8-A26Y-01A-11R-A16F-07 KCNH7-SLC38A11 6 28 chr2:162836537:- chr2:164939556:- INFRAME NA TCGA-C8-A26Y-01A-11R-A16F-07 USP31-NPIPB5 7 16 chr16:23148638:- chr16:22523820:+ INFRAME NA TCGA-C8-A26Y-01A-11R-A16F-07 DAB2IP-WDR38 4 4 chr9:121763879:+ chr9:124854205:+ FRAMESHIFT NA TCGA-C8-A26Y-01A-11R-A16F-07 ZNF567-TPM3P9 2 9 chr19:36689497:+ chr19:53441796:+ . NA TCGA-C8-A26Y-01A-11R-A16F-07 CTNNA3-LRRC74A 2 2 chr10:67521842:- chr14:76836207:+ INFRAME NA TCGA-C8-A26Y-01A-11R-A16F-07 WDFY3-KCNIP4 1 5 chr4:84713159:- chr4:21763032:- FRAMESHIFT NA TCGA-C8-A26Y-01A-11R-A16F-07 NFIX-RAD23A 1 3 chr19:13025552:+ chr19:12949275:+ INFRAME NA TCGA-C8-A26Y-01A-11R-A16F-07 ZNF567-ZNF761 1000 1000 chr19:36689497:+ chr19:53445001:+ . NA TCGA-C8-A26Y-01A-11R-A16F-07 USP48-NPIPB3 1000 1000 chr16:23148638:- chr16:21415085:- . NA TCGA-C8-A26Z-01A-11R-A16F-07 SAE1-ZBTB45 13 27 chr19:47143605:+ chr19:58517673:- INFRAME NA TCGA-C8-A26Z-01A-11R-A16F-07 FUT8-AGBL4 1 17 chr14:65411993:+ chr1:49245864:- . NA TCGA-C8-A26Z-01A-11R-A16F-07 RAD9A-ENPP7P7 3 7 chr11:67321333:+ chr11:67873341:- . NA TCGA-C8-A26Z-01A-11R-A16F-07 ADIPOR2-CACNA2D4 2 9 chr12:1754514:+ chr12:1810340:- INFRAME NA TCGA-C8-A26Z-01A-11R-A16F-07 UBE2Z-FKBP5 2 1 chr17:48922937:+ chr6:35637158:- INFRAME NA TCGA-C8-A26Z-01A-11R-A16F-07 DOCK8-GLIPR2 1 3 chr9:449927:+ chr9:36162362:+ FRAMESHIFT NA TCGA-C8-A26Z-01A-11R-A16F-07 AHCYL1-MAN1A2 1 2 chr1:109985172:+ chr1:117402186:+ FRAMESHIFT NA TCGA-C8-A26Z-01A-11R-A16F-07 CTDSP2-METTL1 1000 1000 chr12:57846372:- chr12:57771257:- FRAMESHIFT NA TCGA-C8-A273-01A-11R-A16F-07 TOP1-C17orf64 60 231 chr20:41101353:+ chr17:60425783:+ INFRAME Likely Oncogenic NA TCGA-C8-A273-01A-11R-A16F-07 EIF2S2-DEFB123 40 123 chr20:34112096:- chr20:31450029:+ FRAMESHIFT NA TCGA-C8-A273-01A-11R-A16F-07 PARD6B-CASS4 19 39 chr20:50738079:+ chr20:56445900:+ FRAMESHIFT NA TCGA-C8-A273-01A-11R-A16F-07 MMD-NOL4L 6 41 chr17:55407746:- chr20:32548886:- . NA TCGA-C8-A273-01A-11R-A16F-07 ZFP28-SLC9A8 8 28 chr19:56550605:+ chr20:49839541:+ INFRAME NA TCGA-C8-A273-01A-11R-A16F-07 RTFDC1-PARD6B 10 10 chr20:56468766:+ chr20:50749659:+ FRAMESHIFT NA TCGA-C8-A273-01A-11R-A16F-07 KMT2C-CNTNAP2 2 40 chr7:152435626:- chr7:146774271:+ FRAMESHIFT Likely Oncogenic NA TCGA-C8-A273-01A-11R-A16F-07 CPD-SKAP1 5 4 chr17:30385236:+ chr17:48396785:- INFRAME NA TCGA-C8-A273-01A-11R-A16F-07 USP32-UBE2O 1 20 chr17:60223411:- chr17:76405572:- INFRAME NA TCGA-C8-A273-01A-11R-A16F-07 RPRD1B-RALY 3 11 chr20:38066256:+ chr20:34072066:+ . NA TCGA-C8-A273-01A-11R-A16F-07 EPB41L1-TUBD1 1 17 chr20:36122747:+ chr17:59863847:- . NA TCGA-C8-A273-01A-11R-A16F-07 SLC16A5-UNK 2 3 chr17:75089304:+ chr17:75816770:+ . NA TCGA-C8-A273-01A-11R-A16F-07 OPHN1-MAOA 1 5 chrX:68192919:- chrX:43731241:+ FRAMESHIFT NA TCGA-C8-A273-01A-11R-A16F-07 SMARCD2-HCK 1 5 chr17:63842381:- chr20:32071662:+ . NA TCGA-C8-A274-01A-11R-A16F-07 NBEAL2-TMC2 3 7 chr3:46979912:+ chr20:2579146:+ INFRAME NA TCGA-C8-A275-01A-21R-A16F-07 MSI2-PRR15L 39 75 chr17:57627303:+ chr17:47953263:- . NA TCGA-C8-A275-01A-21R-A16F-07 USP32-SCPEP1 24 83 chr17:60252381:- chr17:56998374:+ FRAMESHIFT NA TCGA-C8-A275-01A-21R-A16F-07 TXNRD1-USP30 21 46 chr12:104289040:+ chr12:109067524:+ FRAMESHIFT NA TCGA-C8-A275-01A-21R-A16F-07 SETD4-FTCD 10 52 chr21:36060347:- chr21:46138923:- . NA TCGA-C8-A275-01A-21R-A16F-07 STARD3-STRADA 17 16 chr17:39637231:+ chr17:63714108:- . NA TCGA-C8-A275-01A-21R-A16F-07 MSI2-EFCAB5 3 62 chr17:57529724:+ chr17:30051118:+ FRAMESHIFT NA TCGA-C8-A275-01A-21R-A16F-07 TANC2-SSH2 11 17 chr17:63009626:+ chr17:29677741:- FRAMESHIFT NA TCGA-C8-A275-01A-21R-A16F-07 VMP1-CDC42EP4 6 20 chr17:59811786:+ chr17:73286612:- . NA TCGA-C8-A275-01A-21R-A16F-07 MYO18A-ERBB2 4 17 chr17:29137016:- chr17:39723319:+ . NA TCGA-C8-A275-01A-21R-A16F-07 SKAP1-YPEL2 6 5 chr17:48345905:- chr17:59388327:+ INFRAME NA TCGA-C8-A275-01A-21R-A16F-07 MCM3AP-APP 2 14 chr21:46242802:- chr21:25897673:- FRAMESHIFT NA TCGA-C8-A275-01A-21R-A16F-07 TRIM25-DLX3 3 5 chr17:56913392:- chr17:49995126:- . NA TCGA-C8-A275-01A-21R-A16F-07 MKS1-CCR7 2 5 chr17:58212378:- chr17:40558942:- FRAMESHIFT NA TCGA-C8-A275-01A-21R-A16F-07 BRIP1-CUEDC1 2 4 chr17:61776401:- chr17:57885879:- . Likely Oncogenic NA TCGA-C8-A275-01A-21R-A16F-07 TMEM97-SKAP1 1 4 chr17:28319365:+ chr17:48396785:- INFRAME NA TCGA-C8-A275-01A-21R-A16F-07 FAM222B-GIP 1 2 chr17:28766586:- chr17:48967253:- . NA TCGA-C8-A278-01A-11R-A169-07 PBX1-RHBG 17 44 chr1:164812149:+ chr1:156384527:+ INFRAME NA TCGA-C8-A278-01A-11R-A169-07 FBXL20-CDC6 17 20 chr17:39401361:- chr17:40289408:+ . NA TCGA-C8-A278-01A-11R-A169-07 MLLT10-SNTG1 7 7 chr10:21735235:+ chr8:50502778:+ INFRAME NA TCGA-C8-A278-01A-11R-A169-07 C16orf72-ACSM2A 4 18 chr16:9093001:+ chr16:20460107:+ . NA TCGA-C8-A278-01A-11R-A169-07 FBXL20-WIPF2 5 4 chr17:39401361:- chr17:40278185:+ FRAMESHIFT NA TCGA-C8-A278-01A-11R-A169-07 PATJ-ERI3 2 6 chr1:61990364:+ chr1:44313228:- INFRAME NA TCGA-C8-A278-01A-11R-A169-07 DHX40-ACSM2B 1 4 chr17:59588053:+ chr16:20540773:- FRAMESHIFT NA TCGA-C8-A27A-01A-11R-A169-07 SKIV2L2-CETN3 19 101 chr5:55366875:+ chr5:90394107:- INFRAME NA TCGA-C8-A27A-01A-11R-A169-07 ASAP1-CLVS1 12 64 chr8:130358017:- chr8:61454141:+ INFRAME NA TCGA-C8-A27A-01A-11R-A169-07 NSMAF-LETM2 5 26 chr8:58597387:- chr8:38400272:+ FRAMESHIFT NA TCGA-C8-A27A-01A-11R-A169-07 CHD7-TACC1 5 12 chr8:60781430:+ chr8:38742351:+ . NA TCGA-C8-A27A-01A-11R-A169-07 CASC11-PVT1 3 17 chr8:127703050:- chr8:127855155:+ . NA TCGA-C8-A27A-01A-11R-A169-07 CDK5RAP3-RNF43 2 21 chr17:47974448:+ chr17:58371033:- FRAMESHIFT Likely Oncogenic NA TCGA-C8-A27A-01A-11R-A169-07 C15orf41-LYSMD4 1 17 chr15:36709961:+ chr15:99732007:- . NA TCGA-C8-A27A-01A-11R-A169-07 RNF43-NFE2L1 3 9 chr17:58362544:- chr17:48051117:+ . Likely Oncogenic NA TCGA-C8-A27A-01A-11R-A169-07 MOV10L1-NAV2 3 4 chr22:50117351:+ chr11:19984125:+ INFRAME NA TCGA-C8-A27A-01A-11R-A169-07 VPS13B-NECAB1 1 8 chr8:99442635:+ chr8:90917492:+ FRAMESHIFT NA TCGA-C8-A27A-01A-11R-A169-07 NSD3-UNC5D 1 5 chr8:38381799:- chr8:35549292:+ . NA TCGA-C8-A27A-01A-11R-A169-07 VPS13B-POLR2K 1 4 chr8:99103120:+ chr8:100151824:+ INFRAME NA TCGA-C8-A27B-01A-11R-A169-07 NEMF-SOS2 4 43 chr14:49833423:- chr14:50120384:- FRAMESHIFT NA TCGA-C8-A27B-01A-11R-A169-07 GOLM1-ZCCHC6 2 18 chr9:86077412:- chr9:86305239:- FRAMESHIFT NA TCGA-C8-A27B-01A-11R-A169-07 SHANK2-PATL1 4 7 chr11:71147120:- chr11:59666964:- INFRAME NA TCGA-C8-A27B-01A-11R-A169-07 NAA20-ATP8B4 4 6 chr20:20032653:+ chr15:49981294:- INFRAME NA TCGA-C8-A27B-01A-11R-A169-07 SOX5-DTD2 1 6 chr12:23734684:- chr14:31453344:- INFRAME NA TCGA-C8-A27B-01A-11R-A169-07 OBSCN-SPAG17 1 3 chr1:228277313:+ chr1:118151369:- FRAMESHIFT NA TCGA-C8-A3M7-01A-12R-A21T-07 CTNNA1-SRSF4 1 4 chr5:138812302:+ chr1:29168638:- FRAMESHIFT NA TCGA-C8-A3M8-01A-11R-A213-07 THEM4-DCST2 11 35 chr1:151909360:- chr1:155026715:- FRAMESHIFT NA TCGA-C8-A3M8-01A-11R-A213-07 VPS13B-GMDS 10 15 chr8:99832652:+ chr6:1742586:- FRAMESHIFT NA TCGA-C8-A3M8-01A-11R-A213-07 STAG3L3-FAM196B 4 15 chr7:72998676:- chr5:169884816:- . NA TCGA-C8-A3M8-01A-11R-A213-07 PTOV1-NPAS1 1 6 chr19:49860336:+ chr19:47021006:+ . NA TCGA-C8-A8HP-01A-11R-A36F-07 ADAM10-PLAC9 20 123 chr15:58749480:- chr10:80142082:+ INFRAME NA TCGA-C8-A8HP-01A-11R-A36F-07 ANKRD12-C10orf11 14 57 chr18:9136965:+ chr10:76058666:+ . NA TCGA-C8-A8HP-01A-11R-A36F-07 MED29-MYO1D 7 16 chr19:39393637:+ chr17:32749006:- INFRAME NA TCGA-C8-A8HP-01A-11R-A36F-07 PRPF6-SDC4 3 13 chr20:63995092:+ chr20:45335920:- INFRAME NA TCGA-C8-A8HP-01A-11R-A36F-07 RARA-LGALS16 1 17 chr17:40309286:+ chr19:39657828:+ . NA TCGA-C8-A8HP-01A-11R-A36F-07 SLX4-ADAM32 1 15 chr16:3600979:- chr8:39257187:+ FRAMESHIFT NA TCGA-C8-A8HP-01A-11R-A36F-07 ERBB2-SDF4 2 9 chr17:39700311:+ chr1:1223968:- FRAMESHIFT NA TCGA-C8-A8HQ-01A-11R-A36F-07 GPBP1L1-TRAPPC9 2 23 chr1:45686412:- chr8:140397745:- . NA TCGA-C8-A8HQ-01A-11R-A36F-07 RTN3-NDUFS8 3 8 chr11:63681778:+ chr11:68032152:+ INFRAME NA TCGA-C8-A8HQ-01A-11R-A36F-07 TRAPPC9-SSBP3 2 2 chr8:139885879:- chr1:54241509:- FRAMESHIFT NA TCGA-C8-A8HQ-01A-11R-A36F-07 C11orf80-PPP6R3 1 4 chr11:66759096:+ chr11:68519501:+ . NA TCGA-C8-A8HR-01A-11R-A36F-07 RUNX1-DTD1 10 37 chr21:34880557:- chr20:18744100:+ FRAMESHIFT Likely Oncogenic NA TCGA-C8-A8HR-01A-11R-A36F-07 EPN1-IGHJ4 8 0 chr19:55695871:+ chr14:105864257:- . NA TCGA-C8-A8HR-01A-11R-A36F-07 FBXW2-LTBP2 1 5 chr9:120776093:- chr14:74525225:- FRAMESHIFT NA TCGA-D8-A13Y-01A-11R-A115-07 PRRC2A-NCR3 19 218 chr6:31636608:+ chr6:31589899:- INFRAME NA TCGA-D8-A13Y-01A-11R-A115-07 CTF1-BCL7C 10 21 chr16:30899533:+ chr16:30888945:- INFRAME NA TCGA-D8-A13Y-01A-11R-A115-07 FAM57B-GSG1L 12 13 chr16:30029432:- chr16:27963203:- FRAMESHIFT NA TCGA-D8-A13Y-01A-11R-A115-07 CLEC16A-LITAF 5 35 chr16:11126146:+ chr16:11556735:- INFRAME NA TCGA-D8-A13Y-01A-11R-A115-07 GTF3C1-MIR762HG 1 21 chr16:27537784:- chr16:30894548:+ . NA TCGA-D8-A13Y-01A-11R-A115-07 CAPRIN2-AMN1 1 14 chr12:30716508:- chr12:31719356:- . NA TCGA-D8-A13Y-01A-11R-A115-07 KIAA2026-CYP20A1 2 3 chr9:5910615:- chr2:203280059:+ . NA TCGA-D8-A13Z-01A-11R-A115-07 PDE10A-POLB 54 174 chr6:165661947:- chr8:42371563:+ INFRAME NA TCGA-D8-A13Z-01A-11R-A115-07 BTN2A1-HIST1H2AC 27 137 chr6:26466088:+ chr6:26138054:+ . NA TCGA-D8-A13Z-01A-11R-A115-07 PRLR-PLCXD3 12 56 chr5:35230268:- chr5:41382534:- . NA TCGA-D8-A13Z-01A-11R-A115-07 PTPRA-ANAPC10 9 19 chr20:3038129:+ chr4:144995603:- FRAMESHIFT NA TCGA-D8-A13Z-01A-11R-A115-07 ARFIP1-FGB 6 20 chr4:152829726:+ chr4:154565808:+ INFRAME NA TCGA-D8-A13Z-01A-11R-A115-07 PCDHA11-ANKHD1 4 12 chr5:140871494:+ chr5:140513363:+ INFRAME NA TCGA-D8-A13Z-01A-11R-A115-07 MTHFD1L-THEMIS 4 9 chr6:151034600:+ chr6:127719823:- INFRAME NA TCGA-D8-A13Z-01A-11R-A115-07 TMEM206-RCOR3 3 11 chr1:212410425:- chr1:211313424:+ INFRAME NA TCGA-D8-A13Z-01A-11R-A115-07 RICTOR-RANBP3L 1 12 chr5:39074111:- chr5:36271311:- INFRAME NA TCGA-D8-A13Z-01A-11R-A115-07 SRP9-PCNX1 1 3 chr1:225783368:+ chr14:71057509:+ FRAMESHIFT NA TCGA-D8-A13Z-01A-11R-A115-07 ZNF544-ERVK3-1 1000 1000 chr19:58230462:+ chr19:58314748:+ . NA TCGA-D8-A140-01A-11R-A115-07 ASPSCR1-COL5A3 7 18 chr17:81981300:+ chr19:10004145:- . NA TCGA-D8-A140-01A-11R-A115-07 FBXL19-IGHJ6 9 0 chr16:30948456:+ chr14:105863240:- . NA TCGA-D8-A140-01A-11R-A115-07 PCTP-MEI4 3 15 chr17:55773895:+ chr6:77690658:+ . NA TCGA-D8-A140-01A-11R-A115-07 NCSTN-CCT3 5 5 chr1:160354290:+ chr1:156321025:- INFRAME NA TCGA-D8-A140-01A-11R-A115-07 OLFM2-CEP112 3 12 chr19:9936304:- chr17:65689218:- INFRAME NA TCGA-D8-A140-01A-11R-A115-07 PRKAR1A-BCAS3 2 13 chr17:68515576:+ chr17:61368327:+ FRAMESHIFT NA TCGA-D8-A140-01A-11R-A115-07 TRIM44-CD44 2 13 chr11:35735445:+ chr11:35176575:+ FRAMESHIFT NA TCGA-D8-A140-01A-11R-A115-07 SPAG9-ARL17B 2 12 chr17:51041501:- chr17:46275418:- . NA TCGA-D8-A140-01A-11R-A115-07 DEPDC5-SFI1 1 10 chr22:31819225:+ chr22:31528690:+ FRAMESHIFT NA TCGA-D8-A140-01A-11R-A115-07 DEPDC5-DRG1 1 9 chr22:31819225:+ chr22:31528690:+ FRAMESHIFT NA TCGA-D8-A140-01A-11R-A115-07 AXIN1-ITCH 2 4 chr16:346148:- chr20:34369394:+ . Likely Oncogenic NA TCGA-D8-A140-01A-11R-A115-07 DUSP7-PBRM1 1 8 chr3:52053940:- chr3:52554879:- INFRAME Likely Oncogenic NA TCGA-D8-A140-01A-11R-A115-07 FCHO2-TNPO1 1 8 chr5:73041315:+ chr5:72882467:+ FRAMESHIFT NA TCGA-D8-A140-01A-11R-A115-07 GLTSCR1L-HIST1H2AC 1 4 chr6:42853738:+ chr6:26138054:+ . NA TCGA-D8-A140-01A-11R-A115-07 ZNF738-MAU2 1 3 chr19:21361858:+ chr19:19338845:+ INFRAME NA TCGA-D8-A140-01A-11R-A115-07 USP8-SLC27A2 1 2 chr15:50439177:+ chr15:50197500:+ FRAMESHIFT NA TCGA-D8-A142-01A-11R-A115-07 NSMCE4A-ATE1 478 1707 chr10:121965286:- chr10:121743858:- FRAMESHIFT NA TCGA-D8-A142-01A-11R-A115-07 EIF2AK2-RMDN2 8 41 chr2:37135484:- chr2:37989541:+ INFRAME NA TCGA-D8-A142-01A-11R-A115-07 RRP36-ADGRF1 1 15 chr6:43027477:+ chr6:47014844:- INFRAME NA TCGA-D8-A142-01A-11R-A115-07 AKR1E2-WAC 2 6 chr10:4842504:+ chr10:28583399:+ INFRAME NA TCGA-D8-A142-01A-11R-A115-07 MTPAP-CUBN 2 6 chr10:30322391:- chr10:16825082:- FRAMESHIFT NA TCGA-D8-A147-01A-11R-A115-07 RPS19-C21orf91-OT1 16 85 chr19:41861212:+ chr21:17763861:- . NA TCGA-D8-A147-01A-11R-A115-07 EHBP1-BCL11A 22 47 chr2:62874532:+ chr2:60452666:- INFRAME NA TCGA-D8-A147-01A-11R-A115-07 HMBS-EHBP1 9 45 chr11:119092811:+ chr2:62826087:+ INFRAME NA TCGA-D8-A147-01A-11R-A115-07 VASP-CYP2S1 9 34 chr19:45507776:+ chr19:41205958:+ INFRAME NA TCGA-D8-A147-01A-11R-A115-07 FADS2-EIF3F 6 23 chr11:61816426:+ chr11:7992887:+ FRAMESHIFT NA TCGA-D8-A147-01A-11R-A115-07 TBC1D20-C20orf96 5 20 chr20:462336:- chr20:284081:- INFRAME NA TCGA-D8-A147-01A-11R-A115-07 ZNF292-B3GAT2 5 19 chr6:87155759:+ chr6:70894272:- INFRAME NA TCGA-D8-A147-01A-11R-A115-07 SOBP-ABCA9 2 10 chr6:107533610:+ chr17:69012083:- INFRAME NA TCGA-D8-A147-01A-11R-A115-07 GPAT3-MRPS18C 1 7 chr4:83544602:+ chr4:83456909:+ INFRAME NA TCGA-D8-A147-01A-11R-A115-07 GUK1-TMEM216 2 3 chr1:228146938:+ chr11:61393231:+ FRAMESHIFT NA TCGA-D8-A147-01A-11R-A115-07 GRAMD1C-CCDC80 2 2 chr3:113838936:+ chr3:112643457:- . NA TCGA-D8-A147-01A-11R-A115-07 DUSP16-GPRC5D 1 3 chr12:12500519:- chr12:12940849:- INFRAME NA TCGA-D8-A147-01A-11R-A115-07 DLGAP1-RAB31 1 2 chr18:3814059:- chr18:9792154:+ INFRAME NA TCGA-D8-A147-01A-11R-A115-07 CDC37-TYK2 1000 1000 chr19:10403378:- chr19:10354234:- INFRAME NA TCGA-D8-A1J8-01A-11R-A13Q-07 POGK-SPAG17 1 2 chr1:166841088:+ chr1:118151369:- INFRAME NA TCGA-D8-A1J9-01A-11R-A13Q-07 SEC61B-SIT1 32 189 chr9:99222643:+ chr9:35650947:- . NA TCGA-D8-A1J9-01A-11R-A13Q-07 TADA2A-MYO1D 4 30 chr17:37442652:+ chr17:32494915:- FRAMESHIFT NA TCGA-D8-A1J9-01A-11R-A13Q-07 MYO19-CNP 6 10 chr17:36532527:- chr17:41976593:+ . NA TCGA-D8-A1J9-01A-11R-A13Q-07 ABL1-ADAMTSL2 2 24 chr9:130714455:+ chr9:133536563:+ FRAMESHIFT Likely Oncogenic NA TCGA-D8-A1J9-01A-11R-A13Q-07 C9orf3-UBAP2 2 5 chr9:94792918:+ chr9:33960878:- FRAMESHIFT NA TCGA-D8-A1J9-01A-11R-A13Q-07 TNC-GABBR2 2 4 chr9:115057153:- chr9:98578072:- FRAMESHIFT NA TCGA-D8-A1J9-01A-11R-A13Q-07 ABL1-NUP214 1 4 chr9:130873037:+ chr9:131139281:+ FRAMESHIFT Likely Oncogenic NA TCGA-D8-A1JA-01A-11R-A13Q-07 INPP4B-ELF2 13 32 chr4:142462663:- chr4:139028349:- . Likely Oncogenic NA TCGA-D8-A1JA-01A-11R-A13Q-07 PLIN2-CA10 10 38 chr9:19123565:- chr17:51747818:- INFRAME NA TCGA-D8-A1JA-01A-11R-A13Q-07 LLGL2-CA10 10 34 chr17:75525825:+ chr17:51931132:- . NA TCGA-D8-A1JA-01A-11R-A13Q-07 OSBPL9-CYP4Z1 5 15 chr1:51750195:+ chr1:47067575:+ INFRAME NA TCGA-D8-A1JA-01A-11R-A13Q-07 ANXA3-BMP2K 1 29 chr4:78554488:+ chr4:78910610:+ FRAMESHIFT NA TCGA-D8-A1JA-01A-11R-A13Q-07 FRAS1-CCSER1 5 5 chr4:78066016:+ chr4:91598572:+ INFRAME NA TCGA-D8-A1JA-01A-11R-A13Q-07 KAT7-SPOP 2 17 chr17:49798558:+ chr17:49622876:- . Likely Oncogenic NA TCGA-D8-A1JA-01A-11R-A13Q-07 HOXB6-SKAP1 2 10 chr17:48603715:- chr17:48137337:- . NA TCGA-D8-A1JA-01A-11R-A13Q-07 HOXB3-SKAP1 2 9 chr17:48604480:- chr17:48137337:- . NA TCGA-D8-A1JA-01A-11R-A13Q-07 FAM83G-TTC19 1 3 chr17:18988247:- chr17:16025017:+ FRAMESHIFT NA TCGA-D8-A1JC-01A-11R-A13Q-07 ZDHHC24-C2CD3 7 46 chr11:66543704:- chr11:74057544:- INFRAME NA TCGA-D8-A1JC-01A-11R-A13Q-07 ADK-KAT6B 7 41 chr10:74314745:+ chr10:74959970:+ INFRAME NA TCGA-D8-A1JC-01A-11R-A13Q-07 ABL1-NUP214 10 12 chr9:130714455:+ chr9:131132596:+ FRAMESHIFT Likely Oncogenic NA TCGA-D8-A1JC-01A-11R-A13Q-07 ERLIN2-FGFR1 3 16 chr8:37749852:+ chr8:38457534:- INFRAME Likely Oncogenic NA TCGA-D8-A1JD-01A-11R-A13Q-07 NCOR1-FBXO3 36 81 chr17:16057514:- chr11:33770830:- INFRAME Likely Oncogenic NA TCGA-D8-A1JF-01A-11R-A13Q-07 NFKBIB-LGALS7B 7 16 chr19:38900211:+ chr19:38790689:+ INFRAME NA TCGA-D8-A1JF-01A-11R-A13Q-07 ARHGEF11-ETV3 1 10 chr1:157044299:- chr1:157125979:- FRAMESHIFT NA TCGA-D8-A1JG-01B-11R-A13Q-07 TANC2-EFCAB3 8 11 chr17:63009626:+ chr17:62344032:+ . NA TCGA-D8-A1JG-01B-11R-A13Q-07 KCNQ1-TSPAN32 1 26 chr11:2528018:+ chr11:2302844:+ INFRAME NA TCGA-D8-A1JG-01B-11R-A13Q-07 RAP1GDS1-CDK12 1 5 chr4:98293515:+ chr17:39564760:+ . Likely Oncogenic NA TCGA-D8-A1JG-01B-11R-A13Q-07 GALNT7-SAP30 1000 1000 chr4:173168961:+ chr4:173373390:+ INFRAME NA TCGA-D8-A1JH-01A-11R-A13Q-07 NRP1-VSTM4 3 38 chr10:33330708:- chr10:49019775:- FRAMESHIFT NA TCGA-D8-A1JI-01A-11R-A13Q-07 SPTAN1-CADPS2 37 76 chr9:128552696:+ chr7:122737068:- . NA TCGA-D8-A1JI-01A-11R-A13Q-07 DENND1A-CADPS2 11 32 chr9:123652013:- chr7:122737068:- INFRAME NA TCGA-D8-A1JI-01A-11R-A13Q-07 PTGES2-DENND1A 12 25 chr9:128127439:- chr9:123583270:- INFRAME NA TCGA-D8-A1JI-01A-11R-A13Q-07 KIAA0368-PACS1 6 13 chr9:111420017:- chr11:66232960:+ FRAMESHIFT NA TCGA-D8-A1JI-01A-11R-A13Q-07 ADK-SPTAN1 1 6 chr10:74224591:+ chr9:128566738:+ FRAMESHIFT NA TCGA-D8-A1JI-01A-11R-A13Q-07 PBX3-PPFIA1 1 4 chr9:125748623:+ chr11:70372215:+ FRAMESHIFT NA TCGA-D8-A1JJ-01A-31R-A14M-07 TANC2-ACE 32 105 chr17:63379826:+ chr17:63486557:+ INFRAME NA TCGA-D8-A1JJ-01A-31R-A14M-07 GRHL2-LRRC63 2 14 chr8:101619697:+ chr13:46228665:+ FRAMESHIFT NA TCGA-D8-A1JJ-01A-31R-A14M-07 GRHL2-TPD52 3 9 chr8:101552782:+ chr8:80042668:- INFRAME NA TCGA-D8-A1JJ-01A-31R-A14M-07 RNF146-C6orf58 1 2 chr6:127267095:+ chr6:127590087:+ . NA TCGA-D8-A1JK-01A-11R-A13Q-07 UBAC2-CLYBL 71 305 chr13:99238554:+ chr13:99891318:+ INFRAME NA TCGA-D8-A1JK-01A-11R-A13Q-07 ZNF292-CGA 59 158 chr6:87155759:+ chr6:87088207:- . NA TCGA-D8-A1JK-01A-11R-A13Q-07 CACUL1-EIF3A 27 49 chr10:118729295:- chr10:119059397:- INFRAME NA TCGA-D8-A1JK-01A-11R-A13Q-07 HERC1-DAPK2 8 13 chr15:63833827:- chr15:63912197:- . NA TCGA-D8-A1JK-01A-11R-A13Q-07 KLC1-MARK3 6 16 chr14:103670283:+ chr14:103448919:+ INFRAME NA TCGA-D8-A1JK-01A-11R-A13Q-07 ADAM9-CLYBL 4 19 chr8:38997160:+ chr13:99772824:+ FRAMESHIFT NA TCGA-D8-A1JK-01A-11R-A13Q-07 TANC2-EFCAB3 5 15 chr17:63200957:+ chr17:62373814:+ INFRAME NA TCGA-D8-A1JK-01A-11R-A13Q-07 UBE2Q2-ODF3L1 1 23 chr15:75843846:+ chr15:75725108:+ FRAMESHIFT NA TCGA-D8-A1JK-01A-11R-A13Q-07 TM2D2-MSI2 4 9 chr8:38995318:- chr17:57401379:+ INFRAME NA TCGA-D8-A1JK-01A-11R-A13Q-07 CAMK1D-PROSER2 1 8 chr10:12349910:+ chr10:11851997:+ . NA TCGA-D8-A1JK-01A-11R-A13Q-07 UHRF1BP1L-DEPDC4 1 4 chr12:100142592:- chr12:100256226:- FRAMESHIFT NA TCGA-D8-A1JK-01A-11R-A13Q-07 ZNF282-CUL1 1 2 chr7:149213814:+ chr7:148766561:+ FRAMESHIFT NA TCGA-D8-A1JK-01A-11R-A13Q-07 CACUL1-EIF6 1000 1000 chr10:118729295:- chr10:119059397:- . NA TCGA-D8-A1JL-01A-11R-A13Q-07 NPM1-RAB4A 28 430 chr5:171388006:+ chr1:229286486:+ INFRAME Likely Oncogenic NA TCGA-D8-A1JL-01A-11R-A13Q-07 CHD7-CCDC58 46 280 chr8:60830577:+ chr3:122363027:- FRAMESHIFT NA TCGA-D8-A1JL-01A-11R-A13Q-07 HSPA9-ARL15 13 96 chr5:138567455:- chr5:53886713:- FRAMESHIFT NA TCGA-D8-A1JL-01A-11R-A13Q-07 DNM2-P2RY11 10 63 chr19:10802358:+ chr19:10113633:+ FRAMESHIFT NA TCGA-D8-A1JL-01A-11R-A13Q-07 CEP70-STAG1 6 29 chr3:138570318:- chr3:136568861:- INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 CYB5RL-TTC39A 3 37 chr1:54190738:- chr1:51290625:- INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 DIP2C-YY1 9 9 chr10:689494:- chr14:100262304:+ INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 PSMD11-PITPNC1 5 15 chr17:32454619:+ chr17:67669508:+ INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 KIAA0753-PHF23 5 7 chr17:6640637:- chr17:7237660:- . NA TCGA-D8-A1JL-01A-11R-A13Q-07 GRHL2-NRBP2 3 5 chr8:101649499:+ chr8:143840229:- INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 RHOBTB3-ARSK 1 11 chr5:95783963:+ chr5:95582916:+ INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 MND1-TRIM2 2 1 chr4:153344740:+ chr4:153328530:+ INFRAME NA TCGA-D8-A1JL-01A-11R-A13Q-07 BTBD1-HOMER2 1 4 chr15:83066751:- chr15:82892841:- INFRAME NA TCGA-D8-A1JM-01A-11R-A13Q-07 TMEM265-MVP 85 1014 chr16:30741908:+ chr16:29840178:+ INFRAME NA TCGA-D8-A1JM-01A-11R-A13Q-07 RBPMS-RILPL1 10 55 chr8:30385158:+ chr12:123485805:- INFRAME NA TCGA-D8-A1JM-01A-11R-A13Q-07 DYNC2H1-U95743.1 3 15 chr11:103312033:+ chr16:13767366:- . NA TCGA-D8-A1JM-01A-11R-A13Q-07 VPS53-MYH2 3 10 chr17:601795:- chr17:10540697:- FRAMESHIFT NA TCGA-D8-A1JM-01A-11R-A13Q-07 CACNA1I-TAB1 3 8 chr22:39662435:+ chr22:39426703:+ INFRAME NA TCGA-D8-A1JM-01A-11R-A13Q-07 ACLY-DNAJC7 3 4 chr17:41898631:- chr17:41977323:- FRAMESHIFT NA TCGA-D8-A1JM-01A-11R-A13Q-07 GAS7-TTLL9 1 4 chr17:10019777:- chr20:31909737:+ FRAMESHIFT NA TCGA-D8-A1JP-01A-11R-A13Q-07 TATDN1-OC90 4 9 chr8:124515746:- chr8:132045883:- FRAMESHIFT NA TCGA-D8-A1JP-01A-11R-A13Q-07 WASHC4-AUTS2 2 4 chr12:105107861:+ chr7:70118132:+ FRAMESHIFT NA TCGA-D8-A1JP-01A-11R-A13Q-07 FANCC-SLC28A3 1 5 chr9:95317526:- chr9:84288178:- . Likely Oncogenic NA TCGA-D8-A1X5-01A-11R-A14D-07 EIF1-MED28 188 413 chr17:41689941:+ chr4:17619901:+ INFRAME NA TCGA-D8-A1X5-01A-11R-A14D-07 UVRAG-EMSY 4 50 chr11:76065788:+ chr11:76528268:+ INFRAME NA TCGA-D8-A1X5-01A-11R-A14D-07 USP35-TSHZ2 5 21 chr11:78189157:+ chr20:53487144:+ . NA TCGA-D8-A1X5-01A-11R-A14D-07 ADGRA3-ERBB2 5 18 chr4:22473772:- chr17:39693261:+ . NA TCGA-D8-A1X5-01A-11R-A14D-07 FAM102B-TMEM56 5 14 chr1:108560565:+ chr1:95143891:+ . NA TCGA-D8-A1X5-01A-11R-A14D-07 LIMCH1-APBB2 6 9 chr4:41524478:+ chr4:41100750:- . NA TCGA-D8-A1X5-01A-11R-A14D-07 SLC30A9-NSUN7 2 20 chr4:41990760:+ chr4:40790602:+ INFRAME NA TCGA-D8-A1X5-01A-11R-A14D-07 TMEM56-FNBP1L 3 14 chr1:95173889:+ chr1:93499468:+ FRAMESHIFT NA TCGA-D8-A1X5-01A-11R-A14D-07 FNBP1L-CHFR 4 5 chr1:93448305:+ chr12:132945797:- . NA TCGA-D8-A1X5-01A-11R-A14D-07 FNBP1L-ZNF605 4 5 chr1:93448305:+ chr12:132945797:- . NA TCGA-D8-A1X5-01A-11R-A14D-07 PPP3CA-COL25A1 1 9 chr4:101346739:- chr4:108974559:- FRAMESHIFT NA TCGA-D8-A1X5-01A-11R-A14D-07 SLC39A14-PRKDC 1 5 chr8:22367408:+ chr8:47849503:- . NA TCGA-D8-A1X6-01A-11R-A14M-07 ARHGAP17-TACC1 1 7 chr16:24941987:- chr8:38742351:+ . NA TCGA-D8-A1X8-01A-11R-A14M-07 ARRB1-KRTAP5-11 3 4 chr11:75281075:- chr11:71582157:- . NA TCGA-D8-A1X9-01A-12R-A157-07 AIFM1-ARL3 5 13 chrX:130159970:- chr10:102705379:- . NA TCGA-D8-A1X9-01A-12R-A157-07 DNTTIP2-GCLM 5 9 chr1:93876268:- chr1:93901669:- FRAMESHIFT NA TCGA-D8-A1X9-01A-12R-A157-07 MCMBP-ZNF23 1 17 chr10:119843248:- chr16:71453350:- INFRAME NA TCGA-D8-A1XA-01A-11R-A14D-07 SUSD1-UGCG 14 83 chr9:112078538:- chr9:111914605:+ FRAMESHIFT NA TCGA-D8-A1XB-01A-11R-A14D-07 TNIK-MTHFD1L 1 4 chr3:171369620:- chr6:151092467:+ INFRAME NA TCGA-D8-A1XF-01A-11R-A14D-07 RNF121-SPCS2P4 39 19 chr11:71929124:+ chr1:28096308:- . NA TCGA-D8-A1XF-01A-11R-A14D-07 PLEKHA2-SHANK2 3 10 chr8:38918070:+ chr11:70502931:- INFRAME NA TCGA-D8-A1XF-01A-11R-A14D-07 CUL4A-TFDP1 1 17 chr13:113244514:+ chr13:113610996:+ FRAMESHIFT NA TCGA-D8-A1XG-01A-11R-A14D-07 EFNA1-CPB1 1000 1000 chr1:155133774:+ chr3:148834509:+ FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 STARD3-C17orf98 50 179 chr17:39653750:+ chr17:38835346:- FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 KIAA0319L-PHC2 37 111 chr1:35442246:- chr1:33325019:- FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 FBXL20-RPL23 33 81 chr17:39401361:- chr17:38853105:- FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 TADA2A-STARD3 20 84 chr17:37411390:+ chr17:39653481:+ . NA TCGA-D8-A1XJ-01A-11R-A14M-07 GNAS-NECTIN2 23 51 chr20:58895684:+ chr19:44882211:+ FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 MED1-PIP4K2B 2 95 chr17:39451038:- chr17:38786920:- FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 ERBB2-MED1 14 17 chr17:39717480:+ chr17:39415339:- FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 THRA-TADA2A 12 21 chr17:40063092:+ chr17:37411269:+ . NA TCGA-D8-A1XJ-01A-11R-A14M-07 ACSS1-PHACTR3 8 21 chr20:25057769:- chr20:59743107:+ INFRAME NA TCGA-D8-A1XJ-01A-11R-A14M-07 C17orf98-CDK12 4 16 chr17:38835213:- chr17:39564760:+ . Likely Oncogenic NA TCGA-D8-A1XJ-01A-11R-A14M-07 PIP4K2B-FBXL20 3 19 chr17:38799266:- chr17:39343241:- INFRAME NA TCGA-D8-A1XJ-01A-11R-A14M-07 STK24-DOCK9 2 17 chr13:98519243:- chr13:98800478:- FRAMESHIFT NA TCGA-D8-A1XJ-01A-11R-A14M-07 ACACA-MED24 4 8 chr17:37406262:- chr17:40053635:- INFRAME NA TCGA-D8-A1XJ-01A-11R-A14M-07 CACNB1-ERBB2 1 19 chr17:39177984:- chr17:39730023:+ . NA TCGA-D8-A1XJ-01A-11R-A14M-07 FBXL20-ARL5C 1 4 chr17:39274970:- chr17:39166617:- . NA TCGA-D8-A1XK-01A-21R-A14M-07 TSPAN14-SFTPD 12 55 chr10:80468687:+ chr10:79942879:- . NA TCGA-D8-A1XK-01A-21R-A14M-07 UBASH3B-FOLH1B 5 23 chr11:122656210:+ chr11:89680609:+ . NA TCGA-D8-A1XK-01A-21R-A14M-07 GCOM1-ADGRL1 5 16 chr15:57604355:+ chr19:14152437:- FRAMESHIFT NA TCGA-D8-A1XK-01A-21R-A14M-07 MYZAP-ADGRL1 5 16 chr15:57604355:+ chr19:14152437:- FRAMESHIFT NA TCGA-D8-A1XK-01A-21R-A14M-07 ELL2-TTC37 3 22 chr5:95919424:- chr5:95498591:- INFRAME NA TCGA-D8-A1XK-01A-21R-A14M-07 ZBTB48-TAS1R1 3 21 chr1:6589050:+ chr1:6576950:+ INFRAME NA TCGA-D8-A1XK-01A-21R-A14M-07 PUM2-IST1 2 13 chr2:20350597:- chr16:71915626:+ . NA TCGA-D8-A1XK-01A-21R-A14M-07 UIMC1-PMM2 1 14 chr5:176943335:- chr16:8847724:+ FRAMESHIFT NA TCGA-D8-A1XL-01A-11R-A14M-07 USP32-CRYBA4 11 37 chr17:60294683:- chr22:26622585:+ . NA TCGA-D8-A1XL-01A-11R-A14M-07 ZNF77-LPCAT2 2 13 chr19:2944838:- chr16:55525508:+ INFRAME NA TCGA-D8-A1XL-01A-11R-A14M-07 LPCAT2-CACTIN 2 7 chr16:55537632:+ chr19:3620272:- INFRAME NA TCGA-D8-A1XO-01A-11R-A14M-07 YWHAB-ARHGAP32 4 19 chr20:44885886:+ chr11:129093707:- . NA TCGA-D8-A1XO-01A-11R-A14M-07 RGS12-THY1 4 16 chr4:3343053:+ chr11:119420929:- . NA TCGA-D8-A1XQ-01A-11R-A14M-07 MCM5-TOM1 6 40 chr22:35421460:+ chr22:35317877:+ INFRAME NA TCGA-D8-A1XQ-01A-11R-A14M-07 SLC39A9-RAD51B 6 19 chr14:69399465:+ chr14:68682937:+ . NA TCGA-D8-A1XQ-01A-11R-A14M-07 HMGA1-PPEF1 1 29 chr6:34243518:+ chrX:18730181:+ FRAMESHIFT NA TCGA-D8-A1XQ-01A-11R-A14M-07 ATP9A-SALL4 5 1 chr20:51768302:- chr20:51784684:- FRAMESHIFT NA TCGA-D8-A1XQ-01A-11R-A14M-07 MRPS28-POGZ 2 13 chr8:80002999:- chr1:151442205:- . NA TCGA-D8-A1XQ-01A-11R-A14M-07 RPS9-TSEN34 2 12 chr19:54201609:+ chr19:54193175:+ INFRAME NA TCGA-D8-A1XQ-01A-11R-A14M-07 GRPEL2-AFAP1L1 2 11 chr5:149345616:+ chr5:149340007:+ FRAMESHIFT NA TCGA-D8-A1XQ-01A-11R-A14M-07 SNX30-SLC31A1 2 7 chr9:112751157:+ chr9:113256114:+ . NA TCGA-D8-A1XQ-01A-11R-A14M-07 USF3-NAA50 1 4 chr3:113664313:- chr3:113724095:- FRAMESHIFT NA TCGA-D8-A1XR-01A-11R-A14M-07 SLC12A8-BFSP2 34 134 chr3:125211299:- chr3:133450303:+ INFRAME NA TCGA-D8-A1XT-01A-11R-A14M-07 DENND5A-SBF2 19 62 chr11:9193494:- chr11:9858396:- INFRAME NA TCGA-D8-A1XT-01A-11R-A14M-07 SLC2A1-GRHL3 6 13 chr1:42958634:- chr1:24331426:+ FRAMESHIFT NA TCGA-D8-A1XU-01A-11R-A14M-07 NEBL-DNAJC1 1 1 chr10:20961672:- chr10:21806099:- INFRAME NA TCGA-D8-A1XW-01A-11R-A14M-07 LPP-ADIPOQ 17 145 chr3:188225527:+ chr3:186853051:+ . NA TCGA-D8-A1XW-01A-11R-A14M-07 PODXL-TYW1B 2 4 chr7:131556260:- chr7:72628997:- FRAMESHIFT NA TCGA-D8-A1XW-01A-11R-A14M-07 MARC2-HLX 1 3 chr1:220763050:+ chr1:220884195:+ INFRAME NA TCGA-D8-A1XY-01A-11R-A14M-07 SYT1-ACSS3 6 6 chr12:79047362:+ chr12:81199341:+ . NA TCGA-D8-A1XY-01A-11R-A14M-07 NBEA-ALG5 5 7 chr13:35117493:+ chr13:36972036:- INFRAME NA TCGA-D8-A1XZ-01A-11R-A14M-07 TATDN1-KB-1568E2.1 104 70 chr8:124539025:- chr8:130599071:- . NA TCGA-D8-A1XZ-01A-11R-A14M-07 ARHGAP35-COL22A1 12 174 chr19:46937408:+ chr8:138780980:- FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 PAK4-CATSPERG 16 70 chr19:39125919:+ chr19:38358278:+ . NA TCGA-D8-A1XZ-01A-11R-A14M-07 ACOT7-FUCA1 13 37 chr1:6281102:- chr1:23854560:- INFRAME NA TCGA-D8-A1XZ-01A-11R-A14M-07 FAM172A-EFNA5 8 38 chr5:94111511:- chr5:107427509:- . NA TCGA-D8-A1XZ-01A-11R-A14M-07 PDE7A-PREX2 9 18 chr8:65734794:- chr8:68038159:+ INFRAME NA TCGA-D8-A1XZ-01A-11R-A14M-07 SRRM1-AUNIP 5 34 chr1:24655129:+ chr1:25837554:- FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 ZNF699-ELAVL1 3 14 chr19:9302378:- chr19:7991831:- . NA TCGA-D8-A1XZ-01A-11R-A14M-07 CBX1-SSH2 4 8 chr17:48101268:- chr17:29695523:- . NA TCGA-D8-A1XZ-01A-11R-A14M-07 RPL11-CAMTA1 2 14 chr1:23695908:+ chr1:7745845:+ FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 KDM4A-HYI 2 13 chr1:43683804:+ chr1:43452319:- FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 CLIC4-SLC45A1 4 4 chr1:24745625:+ chr1:8324306:+ INFRAME NA TCGA-D8-A1XZ-01A-11R-A14M-07 AKT2-YIF1B 1 15 chr19:40255158:- chr19:38309643:- INFRAME Likely Oncogenic NA TCGA-D8-A1XZ-01A-11R-A14M-07 MTBP-PQLC2 2 10 chr8:120446513:+ chr1:19325495:+ FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 NELL1-CCDC83 2 10 chr11:20960560:+ chr11:85865096:+ . NA TCGA-D8-A1XZ-01A-11R-A14M-07 RERE-CYP4A11 2 9 chr1:8465925:- chr1:46938137:- INFRAME NA TCGA-D8-A1XZ-01A-11R-A14M-07 DTWD1-FAM227B 1 10 chr15:49625431:+ chr15:49588083:- INFRAME NA TCGA-D8-A1XZ-01A-11R-A14M-07 RERE-ZSWIM5 1 9 chr1:8465925:- chr1:45088237:- FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 TAOK1-PARP10 1 5 chr17:29491865:+ chr8:143986438:- . NA TCGA-D8-A1XZ-01A-11R-A14M-07 PQLC2-SCMH1 1 4 chr1:19317841:+ chr1:41034048:- FRAMESHIFT NA TCGA-D8-A1XZ-01A-11R-A14M-07 TMCO4-MAP7D1 1 3 chr1:19770542:- chr1:36170971:+ INFRAME NA TCGA-D8-A1Y0-01A-11R-A14M-07 FLNA-TKTL1 63 67 chrX:154374506:- chrX:154305304:+ . NA TCGA-D8-A1Y0-01A-11R-A14M-07 WDYHV1-CDHR2 17 58 chr8:123430033:+ chr5:176565338:+ . NA TCGA-D8-A1Y0-01A-11R-A14M-07 ELOVL2-ERVFRD-1 5 26 chr6:10990415:- chr6:11103715:- INFRAME NA TCGA-D8-A1Y0-01A-11R-A14M-07 NANS-NCBP1 5 17 chr9:98083022:+ chr9:97658640:+ FRAMESHIFT NA TCGA-D8-A1Y0-01A-11R-A14M-07 CLIP4-TOGARAM2 4 15 chr2:29145367:+ chr2:28994725:+ . NA TCGA-D8-A1Y0-01A-11R-A14M-07 SLC1A3-METTL15 2 6 chr5:36671233:+ chr11:28290206:+ INFRAME NA TCGA-D8-A1Y0-01A-11R-A14M-07 METTL15-SLC1A3 1 4 chr11:28211198:+ chr5:36674049:+ INFRAME NA TCGA-D8-A1Y0-01A-11R-A14M-07 HDAC1-ZBTB8B 1 3 chr1:32316782:+ chr1:32480891:+ INFRAME NA TCGA-D8-A1Y2-01A-11R-A157-07 DPP8-TICRR 2 5 chr15:65497864:- chr15:89592047:+ INFRAME NA TCGA-D8-A27F-01A-11R-A16F-07 MSI2-PCTP 61 197 chr17:57262192:+ chr17:55767335:+ INFRAME NA TCGA-D8-A27F-01A-11R-A16F-07 LAMA5-UBN1 50 85 chr20:62362400:- chr16:4868833:+ INFRAME NA TCGA-D8-A27F-01A-11R-A16F-07 ELMSAN1-ENTPD5 40 90 chr14:73726928:- chr14:73961359:- . NA TCGA-D8-A27F-01A-11R-A16F-07 SKI-KCNT2 3 22 chr1:2229735:+ chr1:196492341:- FRAMESHIFT NA TCGA-D8-A27F-01A-11R-A16F-07 UBN1-LAMA5 1 14 chr16:4861102:+ chr20:62362552:- INFRAME NA TCGA-D8-A27G-01A-11R-A16F-07 KPNB1-SKAP1 13 61 chr17:47670832:+ chr17:48162569:- FRAMESHIFT NA TCGA-D8-A27G-01A-11R-A16F-07 TLK2-PITPNC1 4 75 chr17:62481206:+ chr17:67532802:+ INFRAME NA TCGA-D8-A27G-01A-11R-A16F-07 TOM1L2-ULK2 3 4 chr17:17879627:- chr17:19865828:- INFRAME NA TCGA-D8-A27G-01A-11R-A16F-07 ARSG-TEX2 1 5 chr17:68401450:+ chr17:64214242:- . NA TCGA-D8-A27H-01A-11R-A16F-07 KMT2B-ZBTB32 101 54 chr19:35718381:+ chr19:35712917:+ . Inconclusive NA TCGA-D8-A27H-01A-11R-A16F-07 SCAMP2-SLC12A8 12 95 chr15:74873199:- chr3:125092198:- FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 TARBP1-RBM34 13 77 chr1:234446803:- chr1:235131997:- FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 COQ4-DNM1 12 59 chr9:128323147:+ chr9:128250115:+ FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 IKZF1-LRBA 10 36 chr7:50327757:+ chr4:150286034:- INFRAME NA TCGA-D8-A27H-01A-11R-A16F-07 PRCP-RAB30 4 16 chr11:82900235:- chr11:82994122:- INFRAME NA TCGA-D8-A27H-01A-11R-A16F-07 MAML2-CNTN5 4 11 chr11:96091892:- chr11:99844852:+ FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 KCTD20-JARID2 4 3 chr6:36470257:+ chr6:15374117:+ FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 NFIX-DAND5 2 11 chr19:13025552:+ chr19:12973389:+ FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 ESCO1-ABHD3 3 6 chr18:21560859:- chr18:21683965:- FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 MYO6-MSR1 3 5 chr6:75749423:+ chr8:16177992:- . NA TCGA-D8-A27H-01A-11R-A16F-07 ZBTB20-STON1 1 9 chr3:114693528:- chr2:48529880:+ . NA TCGA-D8-A27H-01A-11R-A16F-07 AP2M1-PHF2 1 7 chr3:184180251:+ chr9:93629970:+ FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 GPAT3-MRPS18C 1 7 chr4:83597515:+ chr4:83456909:+ FRAMESHIFT NA TCGA-D8-A27H-01A-11R-A16F-07 PPP1R21-ZBTB20 1 3 chr2:48486758:+ chr3:114582266:- . NA TCGA-D8-A27L-01A-11R-A16F-07 UBR5-SSTR5 11 22 chr8:102412173:- chr16:1078842:+ . NA TCGA-D8-A27M-01A-11R-A16F-07 CD151-CRACR2B 117 513 chr11:837354:+ chr11:831224:+ INFRAME NA TCGA-D8-A27M-01A-11R-A16F-07 CDK8-NPIPB15 7 9 chr13:26254769:+ chr16:74381516:+ FRAMESHIFT NA TCGA-D8-A27M-01A-11R-A16F-07 NFATC2IP-HS3ST4 4 14 chr16:28959100:+ chr16:26135612:+ FRAMESHIFT NA TCGA-D8-A27M-01A-11R-A16F-07 ARHGAP35-YWHAZ 4 12 chr19:46989675:+ chr8:100925039:- FRAMESHIFT NA TCGA-D8-A27M-01A-11R-A16F-07 KANSL1L-ERBB4 1 5 chr2:210129031:- chr2:211630594:- FRAMESHIFT Likely Oncogenic NA TCGA-D8-A27N-01A-11R-A16F-07 TANC2-PHB 37 207 chr17:63009626:+ chr17:49413291:- . NA TCGA-D8-A27N-01A-11R-A16F-07 USP22-SLC39A11 49 102 chr17:21042665:- chr17:72736719:- FRAMESHIFT NA TCGA-D8-A27N-01A-11R-A16F-07 CYTH1-MRC2 10 66 chr17:78736692:- chr17:62664548:+ INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 MSI2-TEX2 6 61 chr17:57529724:+ chr17:64195095:- FRAMESHIFT NA TCGA-D8-A27N-01A-11R-A16F-07 PRKCI-TNIK 13 33 chr3:170235351:+ chr3:171194635:- FRAMESHIFT NA TCGA-D8-A27N-01A-11R-A16F-07 TNKS-ASAH1 4 52 chr8:9615677:+ chr8:18064531:- INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 BPTF-ABCC3 7 9 chr17:67854762:+ chr17:50655832:+ FRAMESHIFT NA TCGA-D8-A27N-01A-11R-A16F-07 FOXK2-ABCA5 3 19 chr17:82584188:+ chr17:69277842:- INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 TNRC6C-APPBP2 6 5 chr17:78093124:+ chr17:60500487:- FRAMESHIFT NA TCGA-D8-A27N-01A-11R-A16F-07 NAALADL2-FBXO45 3 10 chr3:175471758:+ chr3:196577453:+ INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 TEX2-TTYH2 1 10 chr17:64193559:- chr17:74243374:+ INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 MSI2-CA10 1 8 chr17:57262192:+ chr17:51931132:- FRAMESHIFT NA TCGA-D8-A27N-01A-11R-A16F-07 ERN1-SMTNL2 1 5 chr17:64129976:- chr17:4592361:+ INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 EHHADH-ABCC5 1 4 chr3:185204416:- chr3:183978651:- INFRAME NA TCGA-D8-A27N-01A-11R-A16F-07 SHANK2-PGA5 1 3 chr11:71056481:- chr11:61241769:+ FRAMESHIFT NA TCGA-D8-A27R-01A-11R-A16F-07 RGPD5-NBEA 12 14 chr2:109808404:+ chr13:35583898:+ INFRAME NA TCGA-D8-A27R-01A-11R-A16F-07 LUC7L2-JAKMIP1 5 10 chr7:139360322:+ chr4:6112997:- . NA TCGA-D8-A27R-01A-11R-A16F-07 SENP6-ADGRA2 4 13 chr6:75663518:+ chr8:37814896:+ FRAMESHIFT NA TCGA-D8-A27R-01A-11R-A16F-07 TRIM32-MELK 4 13 chr9:116687381:+ chr9:36607575:+ . NA TCGA-D8-A27R-01A-11R-A16F-07 TBR1-PSMD14 3 16 chr2:161420257:+ chr2:161395078:+ FRAMESHIFT NA TCGA-D8-A27R-01A-11R-A16F-07 LNPEP-PART1 3 7 chr5:97003546:+ chr5:60521020:+ . NA TCGA-D8-A27R-01A-11R-A16F-07 SCUBE2-DENND5A 1 8 chr11:9065891:- chr11:9170777:- INFRAME NA TCGA-D8-A27R-01A-11R-A16F-07 ARMT1-RMND1 1 6 chr6:151458572:+ chr6:151436554:- FRAMESHIFT NA TCGA-D8-A27R-01A-11R-A16F-07 PLD6-COPS3 1 4 chr17:17205860:- chr17:17254945:- FRAMESHIFT NA TCGA-D8-A27R-01A-11R-A16F-07 RNF213-SLC26A11 1 4 chr17:80263778:+ chr17:80241771:+ INFRAME NA TCGA-D8-A27R-01A-11R-A16F-07 RNF185-SMTN 1 2 chr22:31160303:+ chr22:31097269:+ . NA TCGA-D8-A27R-01A-11R-A16F-07 HN1L-CRAMP1 1 1 chr16:1698843:+ chr16:1652496:+ FRAMESHIFT NA TCGA-D8-A27T-01A-11R-A16F-07 GOSR2-OMG 5 30 chr17:46935169:+ chr17:31278240:- . NA TCGA-D8-A27V-01A-12R-A17B-07 TBL1XR1-CACNA1C 38 192 chr3:177098466:- chr12:2611903:+ . NA TCGA-D8-A27V-01A-12R-A17B-07 RUBCNL-LCP1 4 4 chr13:46356432:- chr13:46144520:- INFRAME NA TCGA-D8-A27V-01A-12R-A17B-07 SLC7A1-B4GALT4 1 8 chr13:29595416:- chr3:119230244:- . NA TCGA-D8-A27W-01A-11R-A16F-07 AMFR-ITGAM 91 132 chr16:56385919:- chr16:31321241:+ INFRAME NA TCGA-D8-A27W-01A-11R-A16F-07 COLGALT1-FMNL1 38 82 chr19:17560444:+ chr17:45234127:+ INFRAME NA TCGA-D8-A27W-01A-11R-A16F-07 MATR3-PCDHA13 9 28 chr5:139293805:+ chr5:140978949:+ . NA TCGA-D8-A27W-01A-11R-A16F-07 MATR3-PCDHAC1 9 28 chr5:139293805:+ chr5:140978949:+ . NA TCGA-D8-A27W-01A-11R-A16F-07 MATR3-PCDHAC2 9 28 chr5:139293805:+ chr5:140978949:+ . NA TCGA-D8-A27W-01A-11R-A16F-07 PAWR-CLEC2A 4 7 chr12:79689729:- chr12:9916803:- INFRAME NA TCGA-D8-A27W-01A-11R-A16F-07 PEX5-CLSTN3 1 3 chr12:7191700:+ chr12:7157489:+ INFRAME NA TCGA-D8-A4Z1-01A-21R-A266-07 FGGY-CDH17 3 6 chr1:59512439:+ chr8:94162162:- INFRAME NA TCGA-D8-A4Z1-01A-21R-A266-07 EFR3A-SMIM18 2 5 chr8:131946633:+ chr8:30644510:+ FRAMESHIFT NA TCGA-D8-A73W-01A-22R-A352-07 SNX14-EYS 3 16 chr6:85593579:- chr6:65495993:- . NA TCGA-E2-A105-01A-11R-A10J-07 ZGPAT-CNBD2 11 57 chr20:63709164:+ chr20:35987395:+ INFRAME NA TCGA-E2-A105-01A-11R-A10J-07 ADAM18-LSM1 11 10 chr8:39723907:+ chr8:38172033:- FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 CDK13-TAX1BP1 6 18 chr7:40002031:+ chr7:27827738:+ FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 TRIB1-SLC25A32 6 6 chr8:125433609:+ chr8:103407784:- FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 ARHGAP12-DESI1 3 9 chr10:31908172:- chr22:41607861:- FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 GDPD1-COX8A 1 10 chr17:59248785:+ chr11:63976225:+ FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 FAM65C-ZNF335 2 2 chr20:50604645:- chr20:45950595:- INFRAME NA TCGA-E2-A105-01A-11R-A10J-07 VPS13B-TERF1 2 1 chr8:99577633:+ chr8:73020684:+ FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 ZGPAT-HELZ2 1 3 chr20:63709164:+ chr20:63559370:- FRAMESHIFT NA TCGA-E2-A105-01A-11R-A10J-07 LSM1-NSMCE2 1 1 chr8:38176275:- chr8:125151171:+ INFRAME NA TCGA-E2-A107-01A-11R-A10J-07 NUMA1-PITPNM1 21 90 chr11:72007189:- chr11:67498322:- FRAMESHIFT NA TCGA-E2-A107-01A-11R-A10J-07 BPIFA4P-RALY 3 7 chr20:33193641:+ chr20:34031522:+ . NA TCGA-E2-A108-01A-13R-A10J-07 ALKBH5-MYO15A 3 12 chr17:18185013:+ chr17:18167590:+ FRAMESHIFT NA TCGA-E2-A108-01A-13R-A10J-07 PUS1-SFSWAP 1 3 chr12:131939275:+ chr12:131766118:+ INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 RANBP10-RRP15 103 240 chr16:67805428:- chr1:218330948:+ FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 EVPL-MAP2K6 27 76 chr17:76027101:- chr17:69505780:+ FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 NXT1-VPS16 26 56 chr20:23351061:+ chr20:2859719:+ . NA TCGA-E2-A109-01A-11R-A10J-07 UVRAG-PAK1 12 56 chr11:76116015:+ chr11:77323360:- FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 USP43-ENDOV 10 21 chr17:9701700:+ chr17:80425032:+ INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 C2CD3-P2RY6 9 21 chr11:74118228:- chr11:73296485:+ . NA TCGA-E2-A109-01A-11R-A10J-07 CENPV-FERMT1 8 18 chr17:16344597:- chr20:6116044:- INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 CES2-GPATCH2 8 12 chr16:66938241:+ chr1:217449337:- INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 FERMT1-CDRT4 6 15 chr20:6115811:- chr17:15438200:- INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 VPS35-SLC6A2 5 19 chr16:46668930:- chr16:55656644:+ . NA TCGA-E2-A109-01A-11R-A10J-07 MAP2K4-DNAH9 6 13 chr17:12129287:+ chr17:11961867:+ FRAMESHIFT Likely Oncogenic NA TCGA-E2-A109-01A-11R-A10J-07 LRRC59-B4GALNT2 5 13 chr17:50392398:- chr17:49141247:+ FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 BTN3A2-HIST1H2AC 1 21 chr6:26374798:+ chr6:26138054:+ . NA TCGA-E2-A109-01A-11R-A10J-07 YPEL2-HSPA12B 3 9 chr17:59331824:+ chr20:3749969:+ . NA TCGA-E2-A109-01A-11R-A10J-07 HACE1-FBLN1 2 10 chr6:104833042:- chr22:45518682:+ FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 PPFIA1-FRMD8 2 9 chr11:70272436:+ chr11:65393573:+ FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 EFNA4-C20orf96 1 8 chr1:155067440:+ chr20:284081:- INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 ABCC5-NAALADL2 1 3 chr3:184014264:- chr3:175096790:+ FRAMESHIFT NA TCGA-E2-A109-01A-11R-A10J-07 ARRB1-TPCN2 1000 1000 chr11:75283287:- chr11:69078482:+ INFRAME NA TCGA-E2-A109-01A-11R-A10J-07 RAI1-NKX2-2 1000 1000 chr17:17793202:+ chr20:21514026:- . NA TCGA-E2-A10A-01A-21R-A115-07 MACF1-FAF1 13 60 chr1:39427614:+ chr1:50596216:- INFRAME NA TCGA-E2-A10A-01A-21R-A115-07 RALGPS2-QSOX1 3 34 chr1:178777447:+ chr1:180194213:+ . NA TCGA-E2-A10A-01A-21R-A115-07 PRRC2C-CENPL 4 22 chr1:171571421:+ chr1:173824019:- . NA TCGA-E2-A10A-01A-21R-A115-07 RAB3GAP1-MAP4K3 2 10 chr2:135153876:+ chr2:39272542:- INFRAME NA TCGA-E2-A10A-01A-21R-A115-07 STRAP-MYO7A 1 12 chr12:15883676:+ chr11:77155907:+ FRAMESHIFT NA TCGA-E2-A10A-01A-21R-A115-07 ACBD6-GON4L 2 5 chr1:180495461:- chr1:155785374:- FRAMESHIFT NA TCGA-E2-A10A-01A-21R-A115-07 SNRNP48-NISCH 2 1 chr6:7595101:+ chr3:52484513:+ INFRAME NA TCGA-E2-A10A-01A-21R-A115-07 PATJ-KANK4 1000 1000 chr1:62084647:+ chr1:62238382:- . NA TCGA-E2-A10C-01A-21R-A10J-07 LLPH-ADK 1 29 chr12:66130705:- chr10:74589282:+ . NA TCGA-E2-A10C-01A-21R-A10J-07 ANK3-WDFY4 5 7 chr10:60145968:- chr10:48709716:+ . NA TCGA-E2-A10C-01A-21R-A10J-07 CAPS2-GRID1 2 14 chr12:75390322:- chr10:86206648:- FRAMESHIFT NA TCGA-E2-A10C-01A-21R-A10J-07 CPM-KCNMA1 1 10 chr12:68932678:- chr10:76910096:- INFRAME NA TCGA-E2-A10F-01A-11R-A10J-07 ADGRL3-PPP3CA 2 3 chr4:61813889:+ chr4:101109078:- INFRAME NA TCGA-E2-A14N-01A-31R-A137-07 CAPN6-DCX 3 29 chrX:111247368:- chrX:111301743:- INFRAME NA TCGA-E2-A14N-01A-31R-A137-07 FRMD3-BRD4 9 5 chr9:83372913:- chr19:15254262:- INFRAME Oncogenic NA TCGA-E2-A14N-01A-31R-A137-07 ZHX2-VAV3 5 5 chr8:122863539:+ chr1:107642755:- . NA TCGA-E2-A14N-01A-31R-A137-07 CDK5RAP2-ENG 3 12 chr9:120518427:- chr9:127826672:- INFRAME NA TCGA-E2-A14N-01A-31R-A137-07 VAV3-ZHX2 2 11 chr1:107596212:- chr8:122863477:+ . NA TCGA-E2-A14N-01A-31R-A137-07 TBC1D4-COMMD6 1 13 chr13:75481270:- chr13:75526639:- INFRAME NA TCGA-E2-A14N-01A-31R-A137-07 PPP3CA-SPARCL1 2 7 chr4:101346739:- chr4:87499585:- . NA TCGA-E2-A14N-01A-31R-A137-07 BCRP2-UFD1L 1 7 chr22:21103226:+ chr22:19458139:- . NA TCGA-E2-A14N-01A-31R-A137-07 GXYLT1-YAF2 1 7 chr12:42129759:- chr12:42161765:- INFRAME NA TCGA-E2-A14N-01A-31R-A137-07 SHANK2-OPCML 1 4 chr11:70659828:- chr11:132529186:- FRAMESHIFT NA TCGA-E2-A14P-01A-31R-A12D-07 GNAI3-SARS 55 259 chr1:109548838:+ chr1:109223978:+ INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 FRG1FP-PPP1R1B 31 52 chr22:10947304:- chr17:39629972:+ . NA TCGA-E2-A14P-01A-31R-A12D-07 ANKFN1-LRRC37A16P 20 65 chr17:56046325:+ chr17:68147523:- . NA TCGA-E2-A14P-01A-31R-A12D-07 VEZF1-ANKFN1 17 31 chr17:57988079:- chr17:56046072:+ FRAMESHIFT NA TCGA-E2-A14P-01A-31R-A12D-07 GSK3B-FSTL1 7 44 chr3:120002046:- chr3:120416027:- INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 PIGL-TBC1D26 5 51 chr17:16234070:+ chr17:15740100:+ INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 CELSR1-CERK 3 50 chr22:46533627:- chr22:46687206:- INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 MED24-IKZF3 5 23 chr17:40020273:- chr17:39792933:- INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 CDC42EP2-CAPN1 4 19 chr11:65314954:+ chr11:65204683:+ . NA TCGA-E2-A14P-01A-31R-A12D-07 WDR76-PDIA3 4 15 chr15:43836216:+ chr15:43753824:+ INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 TBL1XR1-PIK3CA 5 6 chr3:177197121:- chr3:179198750:+ . NA TCGA-E2-A14P-01A-31R-A12D-07 BCAS3-GH2 1 10 chr17:61084564:+ chr17:63881519:- INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 USP13-PIK3CA 1 10 chr3:179701129:+ chr3:179224081:+ INFRAME NA TCGA-E2-A14P-01A-31R-A12D-07 MYCBP2-RNF219 1 4 chr13:77233156:- chr13:78644997:- FRAMESHIFT NA TCGA-E2-A14Q-01A-11R-A12D-07 KIAA1211-STMN1 19 39 chr4:56179430:+ chr1:25904738:- . NA TCGA-E2-A14Q-01A-11R-A12D-07 FRAS1-DCK 5 5 chr4:78452354:+ chr4:71022367:+ FRAMESHIFT NA TCGA-E2-A14Q-01A-11R-A12D-07 FRAS1-MOB1B 5 4 chr4:78452354:+ chr4:71022367:+ . NA TCGA-E2-A14R-01A-11R-A115-07 LMX1B-RAD51B 32 133 chr9:126615569:+ chr14:68682937:+ . NA TCGA-E2-A14R-01A-11R-A115-07 RAD51B-LMX1B 17 25 chr14:68545624:+ chr9:126690836:+ . NA TCGA-E2-A14R-01A-11R-A115-07 RBFOX2-VN2R3P 11 8 chr22:35781600:- chr9:39017025:+ . NA TCGA-E2-A14R-01A-11R-A115-07 TOP1-PZP 4 18 chr20:41061490:+ chr12:9203951:- INFRAME Likely Oncogenic NA TCGA-E2-A14R-01A-11R-A115-07 MBOAT2-ARHGAP25 2 13 chr2:8873108:- chr2:68775221:+ INFRAME NA TCGA-E2-A14R-01A-11R-A115-07 YWHAE-TLCD2 4 5 chr17:1400047:- chr17:1709581:- INFRAME NA TCGA-E2-A14R-01A-11R-A115-07 PAK4-TTC4 1 15 chr19:39125919:+ chr1:54716600:+ . NA TCGA-E2-A14R-01A-11R-A115-07 PLEKHM1-GAA 3 6 chr17:45475100:- chr17:80107557:+ INFRAME NA TCGA-E2-A14R-01A-11R-A115-07 PLEKHA5-GPC6 2 2 chr12:19132450:+ chr13:94286349:+ FRAMESHIFT NA TCGA-E2-A14R-01A-11R-A115-07 PZP-CPNE4 1 5 chr12:9180983:- chr3:131723625:- INFRAME NA TCGA-E2-A14R-01A-11R-A115-07 ANKRD50-ATP2B1 1 1 chr4:124710000:- chr12:89635251:- FRAMESHIFT NA TCGA-E2-A14T-01A-11R-A115-07 ARID1A-YTHDF2 62 156 chr1:26732792:+ chr1:28737658:+ INFRAME Likely Oncogenic NA TCGA-E2-A14T-01A-11R-A115-07 TMEM117-ZCRB1 18 26 chr12:43844928:+ chr12:42324104:- . NA TCGA-E2-A14T-01A-11R-A115-07 HELZ-PRCD 9 40 chr17:67135970:- chr17:76553109:+ . NA TCGA-E2-A14T-01A-11R-A115-07 HDAC7-IRAK4 7 46 chr12:47791259:- chr12:43768103:+ . NA TCGA-E2-A14T-01A-11R-A115-07 THRAP3-MUTYH 5 23 chr1:36224505:+ chr1:45334511:- . NA TCGA-E2-A14T-01A-11R-A115-07 PYROXD1-SLC2A14 4 21 chr12:21440448:+ chr12:7832814:- INFRAME NA TCGA-E2-A14T-01A-11R-A115-07 CASK-GLIPR1L1 2 15 chrX:41922930:- chr12:75343693:+ FRAMESHIFT NA TCGA-E2-A14T-01A-11R-A115-07 ERICH1-PCM1 3 10 chr8:715861:- chr8:18025361:+ FRAMESHIFT NA TCGA-E2-A14T-01A-11R-A115-07 SMS-DYRK2 2 6 chrX:21940873:+ chr12:67649797:+ INFRAME NA TCGA-E2-A14T-01A-11R-A115-07 SCML2-PPHLN1 1 5 chrX:18260171:- chr12:42335883:+ INFRAME NA TCGA-E2-A14V-01A-11R-A12D-07 AKAP1-PITPNC1 379 259 chr17:57085398:+ chr17:67578186:+ . NA TCGA-E2-A14V-01A-11R-A12D-07 PPM1D-TRIM37 91 276 chr17:60633977:+ chr17:58982921:- FRAMESHIFT NA TCGA-E2-A14V-01A-11R-A12D-07 SYNCRIP-CDK19 36 209 chr6:85642797:- chr6:110746201:- . NA TCGA-E2-A14V-01A-11R-A12D-07 BPTF-FAM117A 40 147 chr17:67966656:+ chr17:49720436:- FRAMESHIFT NA TCGA-E2-A14V-01A-11R-A12D-07 RNFT1-PAAF1 21 66 chr17:59964608:- chr11:73878779:+ INFRAME NA TCGA-E2-A14V-01A-11R-A12D-07 SNAPC5-BPIFB4 17 67 chr15:66497642:- chr20:33104810:+ INFRAME NA TCGA-E2-A14V-01A-11R-A12D-07 SPOP-TAOK1 15 25 chr17:49601865:- chr17:29542561:+ FRAMESHIFT Likely Oncogenic NA TCGA-E2-A14V-01A-11R-A12D-07 PREP-LDLRAD4 10 11 chr6:105397853:- chr18:13621117:+ FRAMESHIFT NA TCGA-E2-A14V-01A-11R-A12D-07 SSH2-NARS2 4 24 chr17:29761150:- chr11:78443758:- . NA TCGA-E2-A14V-01A-11R-A12D-07 SNX14-COL21A1 4 10 chr6:85572137:- chr6:56091583:- . NA TCGA-E2-A14V-01A-11R-A12D-07 PHF12-ANO1 6 0 chr17:28951467:- chr11:70182502:+ INFRAME NA TCGA-E2-A14V-01A-11R-A12D-07 KSR1-MSI2 3 7 chr17:27456874:+ chr17:57401379:+ . NA TCGA-E2-A14V-01A-11R-A12D-07 PPM1D-ATP5G1 3 6 chr17:60663051:+ chr17:48893409:+ . NA TCGA-E2-A14V-01A-11R-A12D-07 PHF12-CDK12 3 4 chr17:28950065:- chr17:39470879:+ INFRAME Likely Oncogenic NA TCGA-E2-A14V-01A-11R-A12D-07 VMP1-FAM222B 2 5 chr17:59707748:+ chr17:28766707:- . NA TCGA-E2-A14V-01A-11R-A12D-07 BPIFB1-SNAPC5 2 4 chr20:33291988:+ chr15:66495419:- INFRAME NA TCGA-E2-A14V-01A-11R-A12D-07 DDX19A-IL15RA 1 7 chr16:70365131:+ chr10:5968928:- INFRAME NA TCGA-E2-A14V-01A-11R-A12D-07 MKS1-KSR1 1 3 chr17:58216666:- chr17:27577492:+ INFRAME NA TCGA-E2-A14X-01A-11R-A115-07 LRP12-TRAPPC9 10 101 chr8:104531907:- chr8:140024079:- FRAMESHIFT NA TCGA-E2-A14X-01A-11R-A115-07 PRKACB-ASH2L 1 2 chr1:84078371:+ chr8:38133454:+ FRAMESHIFT NA TCGA-E2-A14Y-01A-21R-A12D-07 PSMB3-CWC25 12 89 chr17:38755990:+ chr17:38815097:- INFRAME NA TCGA-E2-A14Y-01A-21R-A12D-07 MED1-RHBDL3 5 7 chr17:39447798:- chr17:32288792:+ INFRAME NA TCGA-E2-A14Y-01A-21R-A12D-07 MAP2K3-NKAIN3 2 16 chr17:21284969:+ chr8:62579539:+ FRAMESHIFT NA TCGA-E2-A14Z-01A-11R-A115-07 KDM4B-UBA52 7 24 chr19:5082504:+ chr19:18573293:+ . NA TCGA-E2-A14Z-01A-11R-A115-07 BPTF-NPEPPS 5 10 chr17:67854762:+ chr17:47621768:+ FRAMESHIFT NA TCGA-E2-A14Z-01A-11R-A115-07 ATF2-DIRC3 2 12 chr2:175151060:- chr2:217328152:- . NA TCGA-E2-A14Z-01A-11R-A115-07 NBEAL1-TANK 1 14 chr2:203110282:+ chr2:161223915:+ INFRAME NA TCGA-E2-A14Z-01A-11R-A115-07 RNPC3-KIAA0825 3 5 chr1:103526262:+ chr5:94417380:- . NA TCGA-E2-A14Z-01A-11R-A115-07 STK39-ITGB6 3 3 chr2:168065319:- chr2:160138199:- INFRAME NA TCGA-E2-A14Z-01A-11R-A115-07 DPYD-EDIL3 1 5 chr1:97234852:- chr5:84180521:- FRAMESHIFT NA TCGA-E2-A150-01A-11R-A12D-07 ACTN4-FTO 80 331 chr19:38647907:+ chr16:53810140:+ INFRAME NA TCGA-E2-A150-01A-11R-A12D-07 MPDZ-LURAP1L 13 66 chr9:13247635:- chr9:12821386:+ INFRAME NA TCGA-E2-A150-01A-11R-A12D-07 DSTN-CCT6A 20 24 chr20:17570211:+ chr7:56052422:+ FRAMESHIFT NA TCGA-E2-A150-01A-11R-A12D-07 ATG13-FOLH1 1 43 chr11:46632459:+ chr11:49175957:- . NA TCGA-E2-A150-01A-11R-A12D-07 LRP5-ZNF507 2 13 chr11:68429700:+ chr19:32382467:+ FRAMESHIFT NA TCGA-E2-A150-01A-11R-A12D-07 BOK-ING5 2 9 chr2:241558993:+ chr2:241704653:+ . NA TCGA-E2-A150-01A-11R-A12D-07 CPT1A-LPCAT2 2 9 chr11:68761535:- chr16:55549277:+ FRAMESHIFT NA TCGA-E2-A150-01A-11R-A12D-07 CCDC129-DEFB118 1 4 chr7:31578434:+ chr20:31372857:+ FRAMESHIFT NA TCGA-E2-A152-01A-11R-A12D-07 PSMD3-SRCIN1 21 7 chr17:39981190:+ chr17:38559772:- INFRAME NA TCGA-E2-A152-01A-11R-A12D-07 ATF4-CDK12 1 4 chr22:39520751:+ chr17:39544249:+ . Likely Oncogenic NA TCGA-E2-A152-01A-11R-A12D-07 CBY1-GTPBP1 1000 1000 chr22:38656750:+ chr22:38708845:+ . NA TCGA-E2-A155-01A-11R-A12D-07 MBOAT1-HBS1L 12 81 chr6:20212136:- chr6:135050647:- FRAMESHIFT NA TCGA-E2-A155-01A-11R-A12D-07 ATXN1-PTPRK 10 69 chr6:16753233:- chr6:128089992:- . NA TCGA-E2-A155-01A-11R-A12D-07 ARRB1-ANKFN1 9 18 chr11:75351588:- chr17:56184749:+ . NA TCGA-E2-A155-01A-11R-A12D-07 CMTM8-RAF1 9 9 chr3:32239119:+ chr3:12618747:- . Likely Oncogenic NA TCGA-E2-A155-01A-11R-A12D-07 SESN1-AIM1 4 10 chr6:109093795:- chr6:106451694:+ FRAMESHIFT NA TCGA-E2-A155-01A-11R-A12D-07 ZNF322-PPIL6 1 21 chr6:26658558:- chr6:109392937:- . NA TCGA-E2-A156-01A-11R-A12D-07 AP5Z1-SGCA 3 9 chr7:4787652:+ chr17:50170166:+ FRAMESHIFT NA TCGA-E2-A158-01A-11R-A12D-07 AEBP2-PVT1 8 71 chr12:19404124:+ chr8:127939508:+ . NA TCGA-E2-A158-01A-11R-A12D-07 PVT1-POU5F1B 4 80 chr8:127939676:+ chr8:127414888:+ . NA TCGA-E2-A158-01A-11R-A12D-07 PVT1-AEBP2 5 37 chr8:127794734:+ chr12:19500097:+ . NA TCGA-E2-A158-01A-11R-A12D-07 EIF4G3-PPP2R3A 3 19 chr1:21176722:- chr3:136087883:+ INFRAME NA TCGA-E2-A158-01A-11R-A12D-07 LRRC8A-GON4L 2 18 chr9:128886121:+ chr1:155805141:- . NA TCGA-E2-A158-01A-11R-A12D-07 ASH1L-TBC1D13 4 6 chr1:155562153:- chr9:128788334:+ . NA TCGA-E2-A158-01A-11R-A12D-07 HLCS-CD53 2 3 chr21:36936449:- chr1:110891392:+ . NA TCGA-E2-A158-01A-11R-A12D-07 TCF20-NDUFA6 1 3 chr22:42343479:- chr22:42087175:- . NA TCGA-E2-A159-01A-11R-A115-07 GNAQ-C9orf64 24 34 chr9:77794463:- chr9:83944989:- INFRAME NA TCGA-E2-A159-01A-11R-A115-07 KLF9-ACTL7B 6 24 chr9:70385548:- chr9:108854888:- . NA TCGA-E2-A159-01A-11R-A115-07 DPH7-PTPA 7 17 chr9:137574208:- chr9:129123052:+ FRAMESHIFT NA TCGA-E2-A159-01A-11R-A115-07 LRSAM1-DENND1A 1 17 chr9:127452084:+ chr9:123457897:- . NA TCGA-E2-A159-01A-11R-A115-07 KIF1B-MYO5B 2 11 chr1:10268263:+ chr18:50001411:- FRAMESHIFT NA TCGA-E2-A159-01A-11R-A115-07 ABL1-BRD3 1 2 chr9:130714455:+ chr9:134053590:- . Likely Oncogenic NA TCGA-E2-A15A-01A-11R-A12D-07 KAT6A-ADAM2 56 279 chr8:42048378:- chr8:39769575:- FRAMESHIFT NA TCGA-E2-A15A-01A-11R-A12D-07 NSD3-ANK1 8 261 chr8:38347497:- chr8:41758137:- INFRAME NA TCGA-E2-A15A-01A-11R-A12D-07 DYRK1A-KDM4B 13 9 chr21:37367628:+ chr19:5039836:+ . NA TCGA-E2-A15A-01A-11R-A12D-07 PRICKLE3-CACNA1F 6 31 chrX:49183734:- chrX:49209393:- INFRAME NA TCGA-E2-A15A-01A-11R-A12D-07 ASH2L-MGME1 5 34 chr8:38114287:+ chr20:17988166:+ FRAMESHIFT NA TCGA-E2-A15A-01A-11R-A12D-07 PPP6R3-FADD 3 39 chr11:68460827:+ chr11:70206133:+ . NA TCGA-E2-A15A-01A-11R-A12D-07 ATP1A1-VANGL1 6 20 chr1:116373523:+ chr1:115663661:+ INFRAME NA TCGA-E2-A15A-01A-11R-A12D-07 GALNT11-FKBP3 2 11 chr7:152027718:+ chr14:45130800:- . NA TCGA-E2-A15A-01A-11R-A12D-07 ALG8-OXA1L 3 6 chr11:78101093:- chr14:22767958:+ INFRAME NA TCGA-E2-A15A-01A-11R-A12D-07 FAM168A-UVRAG 3 5 chr11:73597923:- chr11:75861746:+ . NA TCGA-E2-A15A-01A-11R-A12D-07 WWP1-ATP6V0D2 1 12 chr8:86369031:+ chr8:86139457:+ . NA TCGA-E2-A15A-01A-11R-A12D-07 MED13L-DGKH 1 8 chr12:116003003:- chr13:42208959:+ FRAMESHIFT NA TCGA-E2-A15A-01A-11R-A12D-07 DGKH-MED13L 1 7 chr13:42221394:+ chr12:116022601:- FRAMESHIFT NA TCGA-E2-A15A-01A-11R-A12D-07 STMN3-PTK6 1 7 chr20:63657350:- chr20:63530927:- . NA TCGA-E2-A15A-01A-11R-A12D-07 FKBP3-NUB1 2 2 chr14:45129794:- chr7:151366939:+ FRAMESHIFT NA TCGA-E2-A15A-01A-11R-A12D-07 DNAJC9-CFAP70 1 1 chr10:73241662:- chr10:73256416:- . NA TCGA-E2-A15D-01A-11R-A115-07 APIP-C10orf35 3 17 chr11:34916228:- chr10:69631480:+ FRAMESHIFT NA TCGA-E2-A15D-01A-11R-A115-07 GRIK2-ARMC2 2 8 chr6:101399392:+ chr6:108953033:+ FRAMESHIFT NA TCGA-E2-A15E-01A-11R-A12D-07 H2AFY-CNOT6 7 28 chr5:135352946:- chr5:180564489:+ INFRAME NA TCGA-E2-A15E-01A-11R-A12D-07 SUFU-GBF1 7 8 chr10:102550106:+ chr10:102351256:+ INFRAME NA TCGA-E2-A15E-01A-11R-A12D-07 PRR12-PRRG2 3 4 chr19:49621622:+ chr19:49588497:+ FRAMESHIFT NA TCGA-E2-A15E-01A-11R-A12D-07 LETM1-POLN 1 4 chr4:1841347:- chr4:2081743:- FRAMESHIFT NA TCGA-E2-A15E-01A-11R-A12D-07 ALDOA-COL1A1 1 2 chr16:30068700:+ chr17:50194447:- FRAMESHIFT NA TCGA-E2-A15E-01A-11R-A12D-07 PTPN1-PREX1 1 2 chr20:50574654:+ chr20:48745147:- INFRAME NA TCGA-E2-A15F-01A-11R-A115-07 PTPRT-NCOA3 85 138 chr20:42315723:- chr20:47583183:+ . Likely Oncogenic NA TCGA-E2-A15F-01A-11R-A115-07 NSD3-PLAT 4 22 chr8:38381799:- chr8:42193211:- . NA TCGA-E2-A15F-01A-11R-A115-07 TOP1-PTPRT 4 9 chr20:41029455:+ chr20:42282525:- FRAMESHIFT Likely Oncogenic NA TCGA-E2-A15H-01A-11R-A12D-07 SYNRG-CSH2 25 127 chr17:37553115:- chr17:63873339:- INFRAME NA TCGA-E2-A15H-01A-11R-A12D-07 CHMP5-VMP1 28 56 chr9:33266114:+ chr17:59808796:+ INFRAME NA TCGA-E2-A15H-01A-11R-A12D-07 COIL-CDR2L 20 66 chr17:56960775:- chr17:74999504:+ FRAMESHIFT NA TCGA-E2-A15H-01A-11R-A12D-07 PHF12-OR2AM1P 11 40 chr17:28921688:- chr9:36021920:+ . NA TCGA-E2-A15H-01A-11R-A12D-07 TRAPPC9-COL22A1 6 48 chr8:140360050:- chr8:138755829:- FRAMESHIFT NA TCGA-E2-A15H-01A-11R-A12D-07 BPTF-CCDC40 4 29 chr17:67932019:+ chr17:80047279:+ FRAMESHIFT NA TCGA-E2-A15H-01A-11R-A12D-07 AKAP1-GGA3 6 18 chr17:57085398:+ chr17:75246796:- . NA TCGA-E2-A15H-01A-11R-A12D-07 CDC6-RNFT1 5 19 chr17:40301030:+ chr17:59963284:- FRAMESHIFT NA TCGA-E2-A15H-01A-11R-A12D-07 AKAP1-C17orf67 4 18 chr17:57107178:+ chr17:56816058:- . NA TCGA-E2-A15H-01A-11R-A12D-07 APTX-GNE 4 12 chr9:33001567:- chr9:36220020:- FRAMESHIFT NA TCGA-E2-A15H-01A-11R-A12D-07 MSI2-WIPF2 2 10 chr17:57401471:+ chr17:40256391:+ . NA TCGA-E2-A15K-01A-11R-A12P-07 FDFT1-INTS9 5 16 chr8:11802931:+ chr8:28850273:- INFRAME NA TCGA-E2-A15K-01A-11R-A12P-07 INTS9-PHYHIP 3 9 chr8:28835292:- chr8:22232003:- . NA TCGA-E2-A15K-01A-11R-A12P-07 SPATA5-CENPE 1 4 chr4:122979386:+ chr4:103177046:- INFRAME NA TCGA-E2-A15M-01A-11R-A12D-07 HNRNPAB-F12 15 50 chr5:178211026:+ chr5:177404970:- . NA TCGA-E2-A15M-01A-11R-A12D-07 RSPRY1-VN1R35P 6 32 chr16:57221415:+ chr7:63963735:- . NA TCGA-E2-A15M-01A-11R-A12D-07 FBXL20-MSL1 4 17 chr17:39297127:- chr17:40134279:+ INFRAME NA TCGA-E2-A15M-01A-11R-A12D-07 SNX30-DENND1A 4 7 chr9:112817815:+ chr9:123457897:- INFRAME NA TCGA-E2-A15M-01A-11R-A12D-07 LGALS8-TRIM67 1 17 chr1:236526115:+ chr1:231197371:+ INFRAME NA TCGA-E2-A15M-01A-11R-A12D-07 BBX-WBSCR17 2 1 chr3:107798720:+ chr7:71335550:+ INFRAME NA TCGA-E2-A15M-01A-11R-A12D-07 FBXL20-SYNRG 1 3 chr17:39297127:- chr17:37554059:- FRAMESHIFT NA TCGA-E2-A15O-01A-11R-A115-07 MRPL21-SSH3 33 131 chr11:68896515:- chr11:67306838:+ INFRAME NA TCGA-E2-A15P-01A-11R-A115-07 SEC23A-PSMC1 42 27 chr14:39095898:- chr14:90272273:+ FRAMESHIFT NA TCGA-E2-A15P-01A-11R-A115-07 ZBTB7A-MLLT1 8 62 chr19:4055012:- chr19:6270759:- FRAMESHIFT NA TCGA-E2-A15P-01A-11R-A115-07 PATJ-GLIS1 4 17 chr1:62017947:+ chr1:53600278:- FRAMESHIFT NA TCGA-E2-A15P-01A-11R-A115-07 SMAP1-C14orf132 2 9 chr6:70732511:+ chr14:96086511:+ INFRAME NA TCGA-E2-A15P-01A-11R-A115-07 ZNF839-MYH14 1 2 chr14:102320053:+ chr19:50266877:+ INFRAME NA TCGA-E2-A15R-01A-11R-A115-07 CPT1A-ADAM2 23 106 chr11:68773265:- chr8:39749744:- INFRAME NA TCGA-E2-A15R-01A-11R-A115-07 FAM86C2P-PC 10 83 chr11:67805218:- chr11:66952468:- . NA TCGA-E2-A15S-01A-11R-A115-07 SESTD1-ACMSD 4 13 chr2:179264499:- chr2:134898341:+ . NA TCGA-E2-A15S-01A-11R-A115-07 TSPAN15-VPS26A 4 3 chr10:69451690:+ chr10:69155812:+ INFRAME NA TCGA-E2-A15T-01A-11R-A115-07 DUS2-UNC5C 4 15 chr16:68038149:+ chr4:95250667:- INFRAME NA TCGA-E2-A15T-01A-11R-A115-07 LRRC6-EXT1 1 18 chr8:132675318:- chr8:117837201:- . NA TCGA-E2-A1AZ-01A-11R-A12P-07 TET3-ACTG2 8 76 chr2:74003166:+ chr2:73901276:+ . NA TCGA-E2-A1AZ-01A-11R-A12P-07 RPS8-C1orf228 7 27 chr1:44778129:+ chr1:44724122:+ INFRAME NA TCGA-E2-A1AZ-01A-11R-A12P-07 SRC-MANBAL 4 3 chr20:37346255:+ chr20:37301208:+ . NA TCGA-E2-A1AZ-01A-11R-A12P-07 SNCAIP-SRFBP1 2 5 chr5:122312284:+ chr5:122075315:+ . NA TCGA-E2-A1AZ-01A-11R-A12P-07 WASHC2A-ASAH2 2 2 chr10:50127795:+ chr10:50206097:- FRAMESHIFT NA TCGA-E2-A1AZ-01A-11R-A12P-07 EIF4E2-DIS3L2 1 5 chr2:232564351:+ chr2:232329813:+ FRAMESHIFT NA TCGA-E2-A1AZ-01A-11R-A12P-07 CHKA-KMT5B 1 3 chr11:68081404:- chr11:68175183:- FRAMESHIFT NA TCGA-E2-A1AZ-01A-11R-A12P-07 EIF2AK2-CEBPZ 1 1 chr2:37119959:- chr2:37217037:- INFRAME NA TCGA-E2-A1B0-01A-11R-A12P-07 TRPS1-FAM84B 6 25 chr8:115668545:- chr8:126553503:- . NA TCGA-E2-A1B0-01A-11R-A12P-07 SEPT9-TANC2 5 13 chr17:77281554:+ chr17:63379718:+ FRAMESHIFT NA TCGA-E2-A1B0-01A-11R-A12P-07 RNF170-HOOK3 6 7 chr8:42887728:- chr8:42906173:+ FRAMESHIFT NA TCGA-E2-A1B0-01A-11R-A12P-07 MRPS28-AZIN1 3 5 chr8:80002999:- chr8:102887147:- . NA TCGA-E2-A1B0-01A-11R-A12P-07 CPE-SMIM14 2 6 chr4:165379528:+ chr4:39572463:- FRAMESHIFT NA TCGA-E2-A1B0-01A-11R-A12P-07 AATF-ACACA 1 6 chr17:37021014:+ chr17:37097984:- FRAMESHIFT NA TCGA-E2-A1B0-01A-11R-A12P-07 NCALD-SYBU 1 5 chr8:101719252:- chr8:109619039:- FRAMESHIFT NA TCGA-E2-A1B1-01A-21R-A12P-07 PSME3-GPR37L1 1 27 chr17:42839380:+ chr1:202127741:+ INFRAME NA TCGA-E2-A1B1-01A-21R-A12P-07 PIGU-PTPRT 2 10 chr20:34575104:- chr20:42282525:- INFRAME Likely Oncogenic NA TCGA-E2-A1B5-01A-21R-A12P-07 NR2C1-CCNG2P1 4 7 chr12:95067331:- chr12:75257834:- . NA TCGA-E2-A1B5-01A-21R-A12P-07 DOPEY2-SH3BGR 2 10 chr21:36239955:+ chr21:39475135:+ FRAMESHIFT NA TCGA-E2-A1B6-01A-31R-A12P-07 BOC-PHLDB2 2 26 chr3:113284567:+ chr3:111932269:+ INFRAME NA TCGA-E2-A1B6-01A-31R-A12P-07 SSR3-VEPH1 4 9 chr3:156553655:- chr3:157470529:- FRAMESHIFT NA TCGA-E2-A1B6-01A-31R-A12P-07 H6PD-HIVEP3 2 8 chr1:9247083:+ chr1:41700995:- . NA TCGA-E2-A1B6-01A-31R-A12P-07 CBFB-TIGD7 1 3 chr16:67082308:+ chr16:3302009:- . NA TCGA-E2-A1B6-01A-31R-A12P-07 SLX4IP-SUGT1 1 1 chr20:10458231:+ chr13:52687734:+ INFRAME NA TCGA-E2-A1BC-01A-11R-A12P-07 CHKA-UBE2QL1 17 23 chr11:68120828:- chr5:6492028:+ . NA TCGA-E2-A1BC-01A-11R-A12P-07 FRYL-CNGA1 1 4 chr4:48608987:- chr4:47943412:- INFRAME NA TCGA-E2-A1BD-01A-11R-A12P-07 ZNF169-UBR7 2 18 chr9:94278845:+ chr14:93209824:+ INFRAME NA TCGA-E2-A1IE-01A-11R-A13Q-07 PCCA-CLYBL 3 9 chr13:100235878:+ chr13:99772824:+ FRAMESHIFT NA TCGA-E2-A1IH-01A-11R-A13Q-07 ANK1-ADAM7 16 26 chr8:41733971:- chr8:24526755:+ INFRAME NA TCGA-E2-A1IH-01A-11R-A13Q-07 YME1L1-SLC35D2 6 33 chr10:27148906:- chr9:96360221:- INFRAME NA TCGA-E2-A1IH-01A-11R-A13Q-07 ARHGEF10-DEFA6 4 12 chr8:1869250:+ chr8:6926046:- . NA TCGA-E2-A1IH-01A-11R-A13Q-07 PSTK-YME1L1 3 2 chr10:122990407:+ chr10:27131941:- . NA TCGA-E2-A1II-01A-11R-A144-07 USP34-WDR92 8 22 chr2:61470650:- chr2:68147567:- INFRAME NA TCGA-E2-A1II-01A-11R-A144-07 BRD4-CSE1L 10 4 chr19:15332290:- chr20:49072568:+ . Oncogenic NA TCGA-E2-A1II-01A-11R-A144-07 SIAH2-SERP1 3 16 chr3:150762433:- chr3:150567106:- . NA TCGA-E2-A1II-01A-11R-A144-07 ATP11C-PREX1 3 4 chrX:139932016:- chr20:48692790:- FRAMESHIFT NA TCGA-E2-A1II-01A-11R-A144-07 QKI-TAF12 1 6 chr6:163415335:+ chr1:28622165:- . NA TCGA-E2-A1II-01A-11R-A144-07 GALNT2-PGBD5 1000 1000 chr1:230243413:+ chr1:230351095:- . NA TCGA-E2-A1IL-01A-11R-A14D-07 METAP1-EIF4E 2 1 chr4:98995867:+ chr4:98901982:- INFRAME NA TCGA-E2-A1IN-01A-11R-A13Q-07 FAM53B-SGK2 1 3 chr10:124681607:- chr20:43569385:+ INFRAME NA TCGA-E2-A1IO-01A-11R-A144-07 SHROOM3-GRSF1 39 117 chr4:76586469:+ chr4:70836314:- . NA TCGA-E2-A1IO-01A-11R-A144-07 TRERF1-TMEM132C 2 13 chr6:42451177:- chr12:128616152:+ . NA TCGA-E2-A1IO-01A-11R-A144-07 ARHGAP24-NOA1 1 8 chr4:85721972:+ chr4:56974022:- INFRAME NA TCGA-E2-A1IO-01A-11R-A144-07 CLPX-PDCD7 1000 1000 chr15:65166642:- chr15:65133183:- INFRAME NA TCGA-E2-A1IU-01A-11R-A14D-07 NUMA1-PPP2R5B 14 117 chr11:72069842:- chr11:64926712:+ . NA TCGA-E2-A1IU-01A-11R-A14D-07 CHRDL2-COPB1 4 61 chr11:74718720:- chr11:14469563:- INFRAME NA TCGA-E2-A1IU-01A-11R-A14D-07 ATG2A-MIR4300HG 8 21 chr11:64916965:- chr11:82356628:- . NA TCGA-E2-A1IU-01A-11R-A14D-07 PPP2R5B-KDM2A 1 14 chr11:64918349:+ chr11:67215340:+ . NA TCGA-E2-A1L7-01A-11R-A144-07 TNPO1-GTF2H1 3 38 chr5:72905445:+ chr11:18351881:+ . NA TCGA-E2-A1L7-01A-11R-A144-07 PBRM1-CACNA2D3 2 15 chr3:52603521:- chr3:54386715:+ FRAMESHIFT Likely Oncogenic NA TCGA-E2-A1L7-01A-11R-A144-07 SHANK3-PLXNB2 1 8 chr22:50722437:+ chr22:50294778:- . NA TCGA-E2-A1L7-01A-11R-A144-07 C3orf70-TPRG1 1 4 chr3:185152628:- chr3:189127057:+ . NA TCGA-E2-A1L7-01A-11R-A144-07 PLA2G6-TMEM184B 1 4 chr22:38169218:- chr22:38226870:- FRAMESHIFT NA TCGA-E2-A1L8-01A-11R-A13Q-07 ANO6-IAPP 56 162 chr12:45423062:+ chr12:21378237:+ FRAMESHIFT NA TCGA-E2-A1L8-01A-11R-A13Q-07 STYXL1-PRPF40B 5 22 chr7:76013742:- chr12:49583562:+ . NA TCGA-E2-A1L8-01A-11R-A13Q-07 MDH2-PAWR 2 25 chr7:76060498:+ chr12:79596658:- FRAMESHIFT NA TCGA-E2-A1L8-01A-11R-A13Q-07 NELL2-ATF7 1 12 chr12:44921790:- chr12:53552637:- . NA TCGA-E2-A1L9-01A-11R-A13Q-07 MYL12B-ACAP1 14 35 chr18:3262237:+ chr17:7341948:+ . NA TCGA-E2-A1LA-01A-11R-A144-07 UGCG-UBXN11 4 16 chr9:111914746:+ chr1:26306704:- . NA TCGA-E2-A1LA-01A-11R-A144-07 SMAD3-SENP8 4 7 chr15:67066360:+ chr15:72139577:+ . Likely Oncogenic NA TCGA-E2-A1LB-01A-11R-A144-07 LUC7L3-IKZF3 12 55 chr17:50719831:+ chr17:39792933:- FRAMESHIFT NA TCGA-E2-A1LB-01A-11R-A144-07 MYO1D-TMIGD1 7 52 chr17:32876778:- chr17:30329529:- FRAMESHIFT NA TCGA-E2-A1LB-01A-11R-A144-07 SNF8-PROCA1 1 2 chr17:48943925:- chr17:28704843:- FRAMESHIFT NA TCGA-E2-A1LG-01A-21R-A14M-07 WWP1-CPB2 36 132 chr8:86461846:+ chr13:46087820:- INFRAME NA TCGA-E2-A1LG-01A-21R-A14M-07 TRAPPC10-BRWD1 38 42 chr21:44012560:+ chr21:39258672:- INFRAME NA TCGA-E2-A1LG-01A-21R-A14M-07 DSCR3-IGSF5 5 10 chr21:37267238:- chr21:39765535:+ FRAMESHIFT NA TCGA-E2-A1LH-01A-11R-A14D-07 CEBPB-IGHJ5 7 0 chr20:50191998:+ chr14:105863859:- FRAMESHIFT NA TCGA-E2-A1LH-01A-11R-A14D-07 IGKC-ARHGAP35 4 1 chr2:88857292:- chr19:47004006:+ . NA TCGA-E2-A1LH-01A-11R-A14D-07 HM13-CPQ 1 9 chr20:31514734:+ chr8:96834973:+ FRAMESHIFT NA TCGA-E2-A1LH-01A-11R-A14D-07 NUDCD1-TMEM184C 2 3 chr8:109322309:- chr4:147623834:+ INFRAME NA TCGA-E2-A1LH-01A-11R-A14D-07 YWHAE-OGFRP1 1 5 chr17:1400047:- chr22:42274988:+ . NA TCGA-E2-A1LI-01A-12R-A157-07 TCF7L1-WIF1 49 177 chr2:85134450:+ chr12:65077854:- INFRAME NA TCGA-E2-A1LI-01A-12R-A157-07 MCCC1-MED10 7 45 chr3:183070999:- chr5:6372601:- FRAMESHIFT NA TCGA-E2-A1LI-01A-12R-A157-07 ATP11B-MED10 1 17 chr3:182820376:+ chr5:6372601:- INFRAME NA TCGA-E2-A1LK-01A-21R-A14D-07 ARID1B-NKAIN2 10 46 chr6:156935576:+ chr6:124658186:+ INFRAME Likely Oncogenic NA TCGA-E2-A1LK-01A-21R-A14D-07 KIN-ITIH5 2 13 chr10:7783081:- chr10:7569784:- FRAMESHIFT NA TCGA-E2-A1LK-01A-21R-A14D-07 CDC42BPA-EPRS 3 6 chr1:227016080:- chr1:220007338:- INFRAME NA TCGA-E2-A1LK-01A-21R-A14D-07 SETDB1-PKP4 1 8 chr1:150942688:+ chr2:158620990:+ INFRAME NA TCGA-E2-A1LL-01A-11R-A144-07 ADIPOR2-FOXJ2 23 67 chr12:1754514:+ chr12:8044760:+ INFRAME NA TCGA-E2-A1LL-01A-11R-A144-07 LCOR-CPNE8 17 48 chr10:96833479:+ chr12:38702921:- . NA TCGA-E2-A1LL-01A-11R-A144-07 ABCC9-RASSF8 6 53 chr12:21906126:- chr12:26020145:+ . NA TCGA-E2-A1LL-01A-11R-A144-07 RASSF8-RERGL 11 28 chr12:25959148:+ chr12:18088956:- . NA TCGA-E2-A1LL-01A-11R-A144-07 MPP5-RDH11 6 26 chr14:67241533:+ chr14:67685204:- . NA TCGA-E2-A1LL-01A-11R-A144-07 SMAD3-MAP2K5 9 14 chr15:67125984:+ chr15:67563283:+ . Likely Oncogenic NA TCGA-E2-A1LL-01A-11R-A144-07 MTF2-FNBP1L 5 20 chr1:93079531:+ chr1:93522082:+ INFRAME NA TCGA-E2-A1LL-01A-11R-A144-07 FGD4-ABCC9 5 18 chr12:32564289:+ chr12:21887934:- FRAMESHIFT NA TCGA-E2-A1LL-01A-11R-A144-07 TEAD4-C2CD5 7 10 chr12:2960040:+ chr12:22493337:- . NA TCGA-E2-A1LL-01A-11R-A144-07 SEMA3C-CNTNAP2 5 9 chr7:80916679:- chr7:148415417:+ INFRAME NA TCGA-E2-A1LL-01A-11R-A144-07 NAP1L4-RPAP1 2 18 chr11:2992254:- chr15:41537201:- . NA TCGA-E2-A1LL-01A-11R-A144-07 C6orf62-KIAA0319 1 13 chr6:24714318:- chr6:24601208:- . NA TCGA-E2-A1LL-01A-11R-A144-07 CERS5-SAMD11 2 8 chr12:50167101:- chr1:939040:+ FRAMESHIFT NA TCGA-E2-A1LL-01A-11R-A144-07 DNAJC9-CFAP70 3 3 chr10:73243843:- chr10:73256416:- INFRAME NA TCGA-E2-A1LL-01A-11R-A144-07 RABGAP1-PNPLA7 2 4 chr9:122941093:+ chr9:137484736:- . NA TCGA-E2-A1LL-01A-11R-A144-07 ANAPC5-KDM2B 2 3 chr12:121327096:- chr12:121521100:- FRAMESHIFT NA TCGA-E2-A1LL-01A-11R-A144-07 ZMYND8-CELF5 1 6 chr20:47347856:- chr19:3250985:+ INFRAME NA TCGA-E2-A1LL-01A-11R-A144-07 DDX11-DERA 1 4 chr12:31097997:+ chr12:15956936:+ FRAMESHIFT NA TCGA-E2-A56Z-01A-12R-A29R-07 WDR61-MAPKAPK2 2 1 chr15:78299562:- chr1:206728710:+ . NA TCGA-E2-A56Z-01A-12R-A29R-07 CSGALNACT2-AGAP9 1 1 chr10:43155810:+ chr10:47520567:- INFRAME NA TCGA-E2-A56Z-01A-12R-A29R-07 SETD5-ATG7 1 1 chr3:9397977:+ chr3:11554811:+ . NA TCGA-E2-A573-01A-11R-A29R-07 CAPZB-SCEL 45 156 chr1:19344358:- chr13:77634379:+ INFRAME NA TCGA-E2-A573-01A-11R-A29R-07 PNN-EIF3M 1 1 chr14:39176149:+ chr11:32594914:+ INFRAME NA TCGA-E2-A574-01A-11R-A29R-07 FGFR1-ADAM18 9 42 chr8:38457356:- chr8:39606307:+ INFRAME Likely Oncogenic NA TCGA-E2-A574-01A-11R-A29R-07 PLEKHA2-UHRF1BP1 1 1 chr8:38957386:+ chr6:34870854:+ FRAMESHIFT NA TCGA-E2-A574-01A-11R-A29R-07 ZBTB7B-CKS1B 1 1 chr1:155002943:+ chr1:154977987:+ . NA TCGA-E2-A576-01A-11R-A31O-07 RNF121-SF1 5 11 chr11:71929124:+ chr11:64776626:- FRAMESHIFT NA TCGA-E2-A576-01A-11R-A31O-07 NRBF2-CYP26A1 2 22 chr10:63133500:+ chr10:93075826:+ INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 NAPA-PPP5D1 29 89 chr19:47514843:- chr19:46481440:- FRAMESHIFT NA TCGA-E2-A9RU-01A-11R-A41B-07 MON2-PIP4K2C 2 33 chr12:62549830:+ chr12:57595888:+ INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 TAF6L-TMEM109 5 21 chr11:62782825:+ chr11:60920886:+ INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 ERC1-TACC3 7 12 chr12:1083580:+ chr4:1739702:+ INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 JARID2-BMP6 6 10 chr6:15410365:+ chr6:7879074:+ FRAMESHIFT NA TCGA-E2-A9RU-01A-11R-A41B-07 PREP-QRSL1 7 1 chr6:105397853:- chr6:106640349:+ INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 MTA2-CDHR5 2 19 chr11:62595264:- chr11:618111:- INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 PPP2R2A-LGI3 2 7 chr8:26354633:+ chr8:22152000:- FRAMESHIFT NA TCGA-E2-A9RU-01A-11R-A41B-07 PXDNL-ATP6V1H 2 6 chr8:51809181:- chr8:53756656:- INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 ZZEF1-SPATA22 2 4 chr17:4102317:- chr17:3469398:- . NA TCGA-E2-A9RU-01A-11R-A41B-07 GALNT2-LACE1 2 2 chr1:230067406:+ chr6:108519697:+ INFRAME NA TCGA-E2-A9RU-01A-11R-A41B-07 QRSL1-ATG5 1 2 chr6:106643090:+ chr6:106293106:- INFRAME NA TCGA-E9-A1N4-01A-11R-A14M-07 RAD51B-DCAF5 2 2 chr14:67887204:+ chr14:69122360:- FRAMESHIFT NA TCGA-E9-A1N5-01A-11R-A14D-07 RNF121-FADS2 28 54 chr11:71960891:+ chr11:61857011:+ INFRAME NA TCGA-E9-A1N5-01A-11R-A14D-07 TESMIN-HIPK3 2 11 chr11:68713270:- chr11:33351608:+ FRAMESHIFT NA TCGA-E9-A1N8-01A-11R-A144-07 NOMO2-FBRS 28 95 chr16:18561876:- chr16:30662420:+ INFRAME NA TCGA-E9-A1N8-01A-11R-A144-07 PTPRK-SLC35F1 5 37 chr6:128064758:- chr6:118154445:+ INFRAME NA TCGA-E9-A1N8-01A-11R-A144-07 NFATC2IP-C16orf62 6 10 chr16:28952204:+ chr16:19705116:+ INFRAME NA TCGA-E9-A1N8-01A-11R-A144-07 PEX7-TCF21 4 15 chr6:136826469:+ chr6:133889418:+ FRAMESHIFT NA TCGA-E9-A1N8-01A-11R-A144-07 NOMO2-PRR14 5 3 chr16:18561876:- chr16:30655351:+ FRAMESHIFT NA TCGA-E9-A1N8-01A-11R-A144-07 PIP5K1C-C3 2 13 chr19:3647338:- chr19:6719403:- FRAMESHIFT NA TCGA-E9-A1N8-01A-11R-A144-07 HEATR6-WEE1 4 4 chr17:60072215:- chr11:9581532:+ FRAMESHIFT NA TCGA-E9-A1N8-01A-11R-A144-07 TMEM265-GABBR2 2 5 chr16:30741908:+ chr9:98578072:- INFRAME NA TCGA-E9-A1N8-01A-11R-A144-07 KIAA0556-NECAB2 1 4 chr16:27573956:+ chr16:83972151:+ INFRAME NA TCGA-E9-A1N8-01A-11R-A144-07 MGST1-IPO8 1 1 chr12:16354270:+ chr12:30676587:- INFRAME NA TCGA-E9-A1N9-01A-11R-A14D-07 ERLIN2-RAB11FIP1 25 51 chr8:37744696:+ chr8:37877551:- FRAMESHIFT NA TCGA-E9-A1N9-01A-11R-A14D-07 NEMF-CDKL1 20 16 chr14:49828291:- chr14:50342222:- INFRAME NA TCGA-E9-A1N9-01A-11R-A14D-07 PIGN-CTNNA2 6 36 chr18:62095848:- chr2:80647585:+ FRAMESHIFT NA TCGA-E9-A1N9-01A-11R-A14D-07 TMEM52B-RHNO1 9 19 chr12:10186589:+ chr12:2885283:+ . NA TCGA-E9-A1N9-01A-11R-A14D-07 ATG4D-TMEM52B 7 22 chr19:10549034:+ chr12:10175282:+ . NA TCGA-E9-A1N9-01A-11R-A14D-07 NUP188-ASTN2 6 20 chr9:128973249:+ chr9:116620443:- INFRAME NA TCGA-E9-A1N9-01A-11R-A14D-07 INPP5B-FAF1 8 11 chr1:37931673:- chr1:50705891:- FRAMESHIFT NA TCGA-E9-A1N9-01A-11R-A14D-07 ATAD2-ZNF252P 4 6 chr8:123396187:- chr8:144978553:- . NA TCGA-E9-A1N9-01A-11R-A14D-07 AGL-UBE4B 4 5 chr1:99876597:+ chr1:10033222:+ . NA TCGA-E9-A1N9-01A-11R-A14D-07 ADIPOR2-FAM72B 3 3 chr12:1691213:+ chr1:121181348:- . NA TCGA-E9-A1N9-01A-11R-A14D-07 OCEL1-SMARCA4 2 3 chr19:17227199:+ chr19:10984121:+ . Likely Oncogenic NA TCGA-E9-A1N9-01A-11R-A14D-07 MORN1-CMPK1 1 5 chr1:2384978:- chr1:47368469:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 RPRD1A-SLC39A6 746 2026 chr18:36026900:- chr18:36122270:- INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 PTPRK-HECA 119 360 chr6:128520259:- chr6:139166284:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 SEMA4C-AFF3 55 64 chr2:96861579:- chr2:99649666:- FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 DCP2-REEP5 37 75 chr5:112976986:+ chr5:112921256:- FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 GPNMB-NUPL2 16 76 chr7:23254312:+ chr7:23185070:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 RNH1-SCT 11 88 chr11:507113:- chr11:626530:- . NA TCGA-E9-A1NA-01A-11R-A144-07 SLC37A1-PCP4 12 37 chr21:42568438:+ chr21:39928984:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 UHMK1-PPOX 8 42 chr1:162518190:+ chr1:161169660:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 LONP1-LMO7DN-IT1 10 31 chr19:5700789:- chr13:75879704:+ . NA TCGA-E9-A1NA-01A-11R-A144-07 NFAT5-IST1 11 26 chr16:69566374:+ chr16:71927614:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 PLEKHB2-FAM168B 10 27 chr2:131105398:+ chr2:131082657:- . NA TCGA-E9-A1NA-01A-11R-A144-07 BCAS3-WIPI1 8 16 chr17:60808076:+ chr17:68436479:- FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 SLC16A6-PECAM1 5 23 chr17:68291086:- chr17:64360415:- . NA TCGA-E9-A1NA-01A-11R-A144-07 SKAP1-BCAS3 8 5 chr17:48345905:- chr17:60808004:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 GSAP-APTR 4 20 chr7:77396982:- chr7:77659318:- . NA TCGA-E9-A1NA-01A-11R-A144-07 MCL1-ARNT 4 19 chr1:150577368:- chr1:150818030:- INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 ZNF587B-TMEM150B 2 27 chr19:57819945:+ chr19:55322743:- . NA TCGA-E9-A1NA-01A-11R-A144-07 HIST4H4-RERG 3 15 chr12:14770679:- chr12:15121119:- . NA TCGA-E9-A1NA-01A-11R-A144-07 SRGAP1-TMEM5 3 9 chr12:63844883:+ chr12:63781019:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 CEP112-OTOA 3 7 chr17:66096251:- chr16:21719133:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 MTF2-RPL5 3 6 chr1:93079531:+ chr1:92833389:+ FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 EPHX2-BNIP3L 3 2 chr8:27544244:+ chr8:26408000:+ FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 ZNF587-BRSK1 2 6 chr19:57856233:+ chr19:55306252:+ FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 TSPOAP1-SNF8 2 4 chr17:58322308:- chr17:48933346:- INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 GPR155-CHN1 2 3 chr2:174453737:- chr2:174812482:- INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 DZIP1L-A4GNT 2 2 chr3:138112364:- chr3:138131282:- . NA TCGA-E9-A1NA-01A-11R-A144-07 AXIN1-IFT140 1 5 chr16:304304:- chr16:1526796:- FRAMESHIFT Likely Oncogenic NA TCGA-E9-A1NA-01A-11R-A144-07 CABLES1-RBBP8 1 3 chr18:23194540:+ chr18:22968806:+ INFRAME NA TCGA-E9-A1NA-01A-11R-A144-07 CTTN-PPP6R3 1 3 chr11:70419856:+ chr11:68548067:+ FRAMESHIFT NA TCGA-E9-A1NA-01A-11R-A144-07 MPI-ARIH1 1 3 chr15:74892802:+ chr15:72496791:+ . NA TCGA-E9-A1NA-01A-11R-A144-07 RANBP10-ZFHX3 1 3 chr16:67805428:- chr16:72960194:- . NA TCGA-E9-A1NA-01A-11R-A144-07 MTF2-FAM69A 1 2 chr1:93079531:+ chr1:92876430:- FRAMESHIFT NA TCGA-E9-A1NC-01A-21R-A26B-07 LRRC59-SPAG9 32 91 chr17:50392398:- chr17:50979917:- INFRAME NA TCGA-E9-A1NC-01A-21R-A26B-07 TBC1D12-SLC35G1 1 13 chr10:94497172:+ chr10:93954009:+ . NA TCGA-E9-A1ND-01A-11R-A144-07 ILF3-ZNF627 12 45 chr19:10677310:+ chr19:11575250:+ . NA TCGA-E9-A1ND-01A-11R-A144-07 FAM160B2-DMTN 2 7 chr8:22089298:+ chr8:22069881:+ FRAMESHIFT NA TCGA-E9-A1ND-01A-11R-A144-07 PKP2-DNM1L 1 2 chr12:32850766:- chr12:32701415:+ FRAMESHIFT NA TCGA-E9-A1NE-01A-21R-A14M-07 CUL3-IRS1 67 278 chr2:224557659:- chr2:226736250:- . NA TCGA-E9-A1NE-01A-21R-A14M-07 ZNRF1-BCAS4 3 12 chr16:75000095:+ chr20:50818211:+ FRAMESHIFT NA TCGA-E9-A1NE-01A-21R-A14M-07 TRAP1-ADCY9 3 7 chr16:3671722:- chr16:3979275:- INFRAME NA TCGA-E9-A1NE-01A-21R-A14M-07 RHBG-CCT3 2 8 chr1:156369436:+ chr1:156335888:- INFRAME NA TCGA-E9-A1NE-01A-21R-A14M-07 LRPPRC-EIF4G2 2 1 chr2:43896634:- chr11:10799113:- FRAMESHIFT NA TCGA-E9-A1NE-01A-21R-A14M-07 THBS4-COL3A1 1 3 chr5:80035625:+ chr2:189008035:+ FRAMESHIFT NA TCGA-E9-A1NF-01A-11R-A14D-07 SASH1-ARID1B 9 40 chr6:148390262:+ chr6:156935466:+ INFRAME Likely Oncogenic NA TCGA-E9-A1NF-01A-11R-A14D-07 IGF1R-PPP4R1 3 49 chr15:98924684:+ chr18:9595153:- INFRAME NA TCGA-E9-A1NF-01A-11R-A14D-07 ARID1B-GACAT2 4 26 chr6:156935576:+ chr18:8696121:- . Likely Oncogenic NA TCGA-E9-A1NF-01A-11R-A14D-07 IGF1R-ARID1B 4 13 chr15:98708107:+ chr6:157148624:+ INFRAME Likely Oncogenic NA TCGA-E9-A1NF-01A-11R-A14D-07 MFGE8-IGF1R 4 8 chr15:88905757:- chr15:98891325:+ INFRAME NA TCGA-E9-A1NF-01A-11R-A14D-07 AP3S2-KIF7 3 7 chr15:89871475:- chr15:89608968:- . NA TCGA-E9-A1NF-01A-11R-A14D-07 POSTN-COL1A2 1 11 chr13:37590372:- chr7:94419498:+ INFRAME NA TCGA-E9-A1NF-01A-11R-A14D-07 TMOD3-CERNA1 2 6 chr15:51902036:+ chr15:52204889:+ . NA TCGA-E9-A1NF-01A-11R-A14D-07 NUP50-CDK5RAP1 2 4 chr22:45176080:+ chr20:33359123:- FRAMESHIFT NA TCGA-E9-A1NF-01A-11R-A14D-07 SERINC3-TWSG1 1 8 chr20:44500258:- chr18:9396280:+ . NA TCGA-E9-A1NF-01A-11R-A14D-07 VRK2-CHSY1 1 6 chr2:58048967:+ chr15:101178980:- FRAMESHIFT NA TCGA-E9-A1NF-01A-11R-A14D-07 BRWD1-ABCG1 1 5 chr21:39293811:- chr21:42225671:+ INFRAME NA TCGA-E9-A1NF-01A-11R-A14D-07 IQGAP1-CIB1 1 2 chr15:90426266:+ chr15:90231507:- INFRAME NA TCGA-E9-A1NG-01A-21R-A14M-07 ARHGEF18-MYO9B 5 18 chr19:7447168:+ chr19:17145397:+ INFRAME NA TCGA-E9-A1NI-01A-11R-A14D-07 MISP-C2orf42 6 5 chr19:751171:+ chr2:70165635:- . NA TCGA-E9-A1NI-01A-11R-A14D-07 SPAG17-RABGAP1L 1 12 chr1:118150543:- chr1:174957457:+ INFRAME NA TCGA-E9-A1QZ-01A-21R-A169-07 ACAP2-XXYLT1 2 5 chr3:195381009:- chr3:195070111:- FRAMESHIFT NA TCGA-E9-A1R0-01A-22R-A16F-07 RPN2-STAU1 1 7 chr20:37213865:+ chr20:49124587:- INFRAME NA TCGA-E9-A1R0-01A-22R-A16F-07 FAR1-PSMB7 2 1 chr11:13668806:+ chr9:124356915:- . NA TCGA-E9-A1R2-01A-11R-A14D-07 NRBF2-SAE1 1 5 chr10:63146293:+ chr19:47143494:+ FRAMESHIFT NA TCGA-E9-A1R3-01A-31R-A14M-07 REPS2-NHS 3 5 chrX:17103779:+ chrX:17719344:+ INFRAME NA TCGA-E9-A1R4-01A-21R-A14D-07 TECR-PKN1 1 4 chr19:14529711:+ chr19:14463667:+ INFRAME NA TCGA-E9-A1R4-01A-21R-A14D-07 BET1L-LMF1 1 2 chr11:168943:- chr16:954666:- . NA TCGA-E9-A1R5-01A-11R-A14M-07 JADE2-RPLP0P2 11 37 chr5:134538083:+ chr11:61628842:+ . NA TCGA-E9-A1R6-01A-11R-A14D-07 NCAPG2-N4BP2 14 46 chr7:158701822:- chr4:40152780:+ FRAMESHIFT NA TCGA-E9-A1R6-01A-11R-A14D-07 NEDD4L-ZNF396 4 27 chr18:58252054:+ chr18:35374364:- . NA TCGA-E9-A1R6-01A-11R-A14D-07 MYO5B-CLUL1 3 9 chr18:50194767:- chr18:617988:+ FRAMESHIFT NA TCGA-E9-A1R6-01A-11R-A14D-07 HTT-ESYT2 1 15 chr4:3199939:+ chr7:158773396:- FRAMESHIFT NA TCGA-E9-A1R6-01A-11R-A14D-07 RAB12-MYO5B 3 2 chr18:8624998:+ chr18:50001411:- INFRAME NA TCGA-E9-A1R6-01A-11R-A14D-07 ZNF407-C18orf63 1 9 chr18:74597937:+ chr18:74342032:+ . NA TCGA-E9-A1R7-01A-11R-A14M-07 MOCS3-NIPAL3 89 243 chr20:50961573:+ chr1:24472098:+ . NA TCGA-E9-A1R7-01A-11R-A14M-07 SCMH1-PPT1 40 117 chr1:41070595:- chr1:40074183:- FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 RMND1-ZDHHC14 6 56 chr6:151417279:- chr6:157672724:+ INFRAME NA TCGA-E9-A1R7-01A-11R-A14M-07 TAF4-FAF1 7 37 chr20:62012815:- chr1:50584811:- INFRAME NA TCGA-E9-A1R7-01A-11R-A14M-07 ACOT11-C8B 9 22 chr1:54585904:+ chr1:56952180:- INFRAME NA TCGA-E9-A1R7-01A-11R-A14M-07 PEF1-OSBPL9 9 4 chr1:31644841:- chr1:51745536:+ INFRAME NA TCGA-E9-A1R7-01A-11R-A14M-07 FAM157A-C9 4 14 chr3:198169872:+ chr5:39316029:- . NA TCGA-E9-A1R7-01A-11R-A14M-07 FOXJ3-ZNF362 4 10 chr1:42265115:- chr1:33276100:+ FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 FAF1-HCRTR1 4 9 chr1:50490588:- chr1:31632436:+ FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 SEC22B-ACOT11 2 16 chr1:120168840:- chr1:54597259:+ FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 OSBPL9-C1orf87 3 11 chr1:51652041:+ chr1:60010456:- FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 DPM1-TAF4 1 12 chr20:50940865:- chr20:62014707:- FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 DNMT1-KLF1 1 1 chr19:10168330:- chr19:12886142:- FRAMESHIFT NA TCGA-E9-A1R7-01A-11R-A14M-07 QTRT1-ILF3 1 1 chr19:10702254:+ chr19:10680346:+ INFRAME NA TCGA-E9-A1RB-01A-11R-A157-07 PDHX-CAT 10 52 chr11:34978182:+ chr11:34456011:+ INFRAME NA TCGA-E9-A1RB-01A-11R-A157-07 ASCC1-MICU1 8 21 chr10:72196811:- chr10:72408037:- INFRAME NA TCGA-E9-A1RB-01A-11R-A157-07 MAST2-MMEL1 2 8 chr1:46027863:+ chr1:2612204:- FRAMESHIFT NA TCGA-E9-A1RB-01A-11R-A157-07 CABLES1-RBBP8 1 6 chr18:23136607:+ chr18:23016828:+ INFRAME NA TCGA-E9-A1RB-01A-11R-A157-07 HNRNPA2B1-UBAP2L 1 2 chr7:26200572:- chr1:154225084:+ . NA TCGA-E9-A1RC-01A-11R-A157-07 HARS-FAM53C 9 30 chr5:140690855:- chr5:138341184:+ . NA TCGA-E9-A1RC-01A-11R-A157-07 PLIN1-ACSL6 2 28 chr15:89669500:- chr5:131985458:- INFRAME NA TCGA-E9-A1RC-01A-11R-A157-07 FSTL4-SIL1 2 2 chr5:133312654:- chr5:138951884:- FRAMESHIFT NA TCGA-E9-A1RC-01A-11R-A157-07 CCDC112-EPB41L4A 1 2 chr5:115296427:- chr5:112307490:- INFRAME NA TCGA-E9-A1RE-01A-11R-A157-07 RIPK1-BCKDHB 19 40 chr6:3085408:+ chr6:80273135:+ FRAMESHIFT NA TCGA-E9-A1RE-01A-11R-A157-07 CCDC149-ARAP2 9 27 chr4:24873681:- chr4:36073823:- INFRAME NA TCGA-E9-A1RE-01A-11R-A157-07 CENPBD1P1-IGHJ2 12 0 chr19:58581778:+ chr14:105865247:- . NA TCGA-E9-A1RE-01A-11R-A157-07 ADGRG6-CLSTN2 1 14 chr6:142309644:+ chr3:140175951:+ INFRAME NA TCGA-E9-A1RE-01A-11R-A157-07 SLC20A2-UNC5D 1 12 chr8:42541538:- chr8:35568098:+ . NA TCGA-E9-A1RE-01A-11R-A157-07 PRKDC-ARHGAP23 3 0 chr8:47782162:- chr17:38479436:+ FRAMESHIFT NA TCGA-E9-A1RF-01A-11R-A157-07 FTL-KBTBD2 499 1000 chr19:48966406:+ chr7:32894096:- . NA TCGA-E9-A1RF-01A-11R-A157-07 SUPT5H-SIPA1L3 41 212 chr19:39445965:+ chr19:38152840:+ FRAMESHIFT NA TCGA-E9-A1RF-01A-11R-A157-07 SPAG9-FAM117A 37 78 chr17:51120354:- chr17:49720436:- INFRAME NA TCGA-E9-A1RF-01A-11R-A157-07 MICAL1-AK9 23 78 chr6:109449970:- chr6:109497965:- FRAMESHIFT NA TCGA-E9-A1RF-01A-11R-A157-07 RWDD1-WASF1 19 76 chr6:116571655:+ chr6:110127629:- . NA TCGA-E9-A1RF-01A-11R-A157-07 MAN1A1-PDSS2 9 16 chr6:119348463:- chr6:107154777:- INFRAME NA TCGA-E9-A1RF-01A-11R-A157-07 OSTM1-CEP85L 5 20 chr6:108074250:- chr6:118632611:- FRAMESHIFT NA TCGA-E9-A1RF-01A-11R-A157-07 SRCIN1-FNDC8 6 4 chr17:38561463:- chr17:35127042:+ INFRAME NA TCGA-E9-A1RF-01A-11R-A157-07 HDAC5-MSR1 4 5 chr17:44078597:- chr8:16120606:- INFRAME NA TCGA-E9-A1RF-01A-11R-A157-07 LIG3-ZFAT 2 10 chr17:34994431:+ chr8:134478721:- INFRAME NA TCGA-E9-A1RF-01A-11R-A157-07 PDSS2-SOBP 2 9 chr6:107334198:- chr6:107658207:+ . NA TCGA-E9-A1RF-01A-11R-A157-07 TLK2-SIGLEC9 2 5 chr17:62600820:+ chr19:51135962:+ FRAMESHIFT NA TCGA-E9-A1RF-01A-11R-A157-07 AK9-FAM184A 1 7 chr6:109641518:- chr6:119024813:- INFRAME NA TCGA-E9-A1RF-01A-11R-A157-07 NR1H2-ZNF610 2 2 chr19:50329795:+ chr19:52347707:+ . NA TCGA-E9-A1RG-01A-11R-A14D-07 NCAN-NR2F6 11 68 chr19:19212064:+ chr19:17240765:- . NA TCGA-E9-A1RG-01A-11R-A14D-07 PPP1R12B-TIMM17A 5 20 chr1:202443127:+ chr1:201970188:+ . NA TCGA-E9-A1RG-01A-11R-A14D-07 RMND1-SYNE1 1 20 chr6:151445308:- chr6:152149668:- INFRAME NA TCGA-E9-A1RG-01A-11R-A14D-07 LINS1-WRAP53 2 3 chr15:100602121:- chr17:7688648:+ . NA TCGA-E9-A1RH-01A-21R-A169-07 DDX5-ART1 49 218 chr17:64503430:- chr11:3664295:+ . NA TCGA-E9-A1RH-01A-21R-A169-07 HK1-UTP23 29 112 chr10:69386418:+ chr8:116848888:+ INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 ARPC4-GRM7 31 79 chr3:9804013:+ chr3:7146452:+ INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 ADCY9-GLYR1 14 84 chr16:3988994:- chr16:4812248:- INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 ITGA6-MAP3K20 14 32 chr2:172491523:+ chr2:173169805:+ INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 DEPTOR-ENPP2 11 38 chr8:119965410:+ chr8:119564955:- INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 ZMIZ1-CDPF1 8 50 chr10:79162133:+ chr22:46245238:- . NA TCGA-E9-A1RH-01A-21R-A169-07 MCU-NFIX 4 10 chr10:72692301:+ chr19:13025021:+ INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 TFAM-ANK3 3 11 chr10:58390860:+ chr10:60068877:- INFRAME NA TCGA-E9-A1RH-01A-21R-A169-07 PCBP3-PDHX 2 5 chr21:45735429:+ chr11:35020208:+ . NA TCGA-E9-A1RH-01A-21R-A169-07 PRDM16-BBX 1 6 chr1:3069296:+ chr3:107645836:+ . NA TCGA-E9-A1RI-01A-11R-A169-07 ZNF678-DNAH7 1 2 chr1:227563724:+ chr2:195926566:- INFRAME NA TCGA-E9-A227-01A-11R-A157-07 KMT2C-EMP1 1 3 chr7:152220523:- chr12:13211469:+ . Likely Oncogenic NA TCGA-E9-A228-01A-31R-A157-07 LRTOMT-FOLR1 125 219 chr11:72080885:+ chr11:72189665:+ . NA TCGA-E9-A228-01A-31R-A157-07 PGAP1-SPAG16 34 175 chr2:196916418:- chr2:214410140:+ FRAMESHIFT NA TCGA-E9-A228-01A-31R-A157-07 TAOK1-FLOT2 15 55 chr17:29391024:+ chr17:28889026:- . NA TCGA-E9-A228-01A-31R-A157-07 MSI2-TEX2 18 41 chr17:57262192:+ chr17:64214242:- . NA TCGA-E9-A228-01A-31R-A157-07 WIPF2-PSMD11 5 57 chr17:40273999:+ chr17:32479251:+ FRAMESHIFT NA TCGA-E9-A228-01A-31R-A157-07 CASC3-MED1 8 32 chr17:40141607:+ chr17:39427790:- FRAMESHIFT NA TCGA-E9-A228-01A-31R-A157-07 ANO1-UNC5D 11 19 chr11:70171039:+ chr8:35549292:+ INFRAME NA TCGA-E9-A228-01A-31R-A157-07 KAT6B-DDX4 10 15 chr10:74989112:+ chr5:55738950:+ . NA TCGA-E9-A228-01A-31R-A157-07 MFSD6-GLS 5 31 chr2:190437561:+ chr2:190895152:+ INFRAME NA TCGA-E9-A228-01A-31R-A157-07 HNF1B-CASC3 8 6 chr17:37687017:- chr17:40140521:+ . NA TCGA-E9-A228-01A-31R-A157-07 CWC25-MED24 3 13 chr17:38820901:- chr17:40053635:- INFRAME NA TCGA-E9-A228-01A-31R-A157-07 CDC27-USP32 2 15 chr17:47157230:- chr17:60301704:- INFRAME NA TCGA-E9-A228-01A-31R-A157-07 CPB1-MGP 1 12 chr3:148841924:+ chr12:14882280:- FRAMESHIFT NA TCGA-E9-A229-01A-31R-A157-07 ATE1-ZRANB1 27 43 chr10:121922349:- chr10:124981709:+ INFRAME NA TCGA-E9-A229-01A-31R-A157-07 PCDH15-DUSP13 1 34 chr10:54317271:- chr10:75104097:- INFRAME NA TCGA-E9-A229-01A-31R-A157-07 DLG5-PCDH15 2 15 chr10:77926217:- chr10:54527877:- INFRAME NA TCGA-E9-A229-01A-31R-A157-07 CCDC92B-PACRG 2 13 chr17:2735016:- chr6:163314827:+ . NA TCGA-E9-A229-01A-31R-A157-07 GPR157-GON4L 3 6 chr1:9128645:- chr1:155785374:- FRAMESHIFT NA TCGA-E9-A229-01A-31R-A157-07 COL1A1-MMP2 1 10 chr17:50194349:- chr16:55491801:+ FRAMESHIFT NA TCGA-E9-A229-01A-31R-A157-07 PDSS2-LMBRD1 2 2 chr6:107274029:- chr6:69719081:- INFRAME NA TCGA-E9-A229-01A-31R-A157-07 C12orf45-RIC8B 1 5 chr12:104996026:+ chr12:106783997:+ . NA TCGA-E9-A229-01A-31R-A157-07 STAU1-PREX1 1 5 chr20:49151582:- chr20:48747880:- INFRAME NA TCGA-E9-A229-01A-31R-A157-07 NFRKB-NOX4 1 4 chr11:129885435:- chr11:89402542:- FRAMESHIFT NA TCGA-E9-A229-01A-31R-A157-07 KIAA1191-FAF2 1 1 chr5:176361602:- chr5:176506768:+ . NA TCGA-E9-A22A-01A-11R-A157-07 RMDN1-AKAP6 17 77 chr8:86474820:- chr14:32829848:+ INFRAME NA TCGA-E9-A22A-01A-11R-A157-07 WWP1-NUBPL 4 49 chr8:86381629:+ chr14:31826629:+ INFRAME NA TCGA-E9-A22A-01A-11R-A157-07 PDGFB-RPL3 8 16 chr22:39231622:- chr22:39318592:- INFRAME NA TCGA-E9-A22A-01A-11R-A157-07 SPATA6-MAD2L2 4 12 chr1:48451552:- chr1:11676948:- FRAMESHIFT NA TCGA-E9-A22A-01A-11R-A157-07 MKL2-CACNA1H 2 4 chr16:14140760:+ chr16:1200256:+ FRAMESHIFT NA TCGA-E9-A22B-01A-11R-A157-07 RIMS2-ODF1 32 76 chr8:103501062:+ chr8:102560452:+ INFRAME NA TCGA-E9-A22B-01A-11R-A157-07 PKN2-VAV3 1 3 chr1:88813733:+ chr1:107669472:- FRAMESHIFT NA TCGA-E9-A22B-01A-11R-A157-07 SERPINA5-CPB1 1000 1000 chr14:94593120:+ chr3:148840692:+ . NA TCGA-E9-A22B-01A-11R-A157-07 ITGA3-CPB1 1000 1000 chr17:50090080:+ chr3:148844506:+ . NA TCGA-E9-A22D-01A-11R-A157-07 UAP1-TSHZ2 125 1001 chr1:162581459:+ chr20:53487144:+ . NA TCGA-E9-A22D-01A-11R-A157-07 BPTF-RGS9 118 349 chr17:67854762:+ chr17:65168200:+ INFRAME NA TCGA-E9-A22D-01A-11R-A157-07 PHLDA3-MYBPH 19 127 chr1:201468341:- chr1:203170450:- . NA TCGA-E9-A22D-01A-11R-A157-07 MIR181A1HG-BCAS1 23 79 chr1:198900411:- chr20:53957497:- . NA TCGA-E9-A22D-01A-11R-A157-07 SDF2-MAP2K6 22 69 chr17:28655287:- chr17:69536115:+ INFRAME NA TCGA-E9-A22D-01A-11R-A157-07 ATF6-SERINC3 25 39 chr1:161863312:+ chr20:44501300:- FRAMESHIFT NA TCGA-E9-A22D-01A-11R-A157-07 HELZ2-ADA 16 48 chr20:63572108:- chr20:44636288:- FRAMESHIFT NA TCGA-E9-A22D-01A-11R-A157-07 XPO1-HORMAD1 12 61 chr2:61498673:- chr1:150719538:- . NA TCGA-E9-A22D-01A-11R-A157-07 TTC13-JAK2 14 52 chr1:230939386:- chr9:5064883:+ INFRAME Likely Oncogenic NA TCGA-E9-A22D-01A-11R-A157-07 MRNIP-SLC36A4 11 63 chr5:179840872:- chr11:93154200:- FRAMESHIFT NA TCGA-E9-A22D-01A-11R-A157-07 VMP1-DHCR7 8 48 chr17:59841324:+ chr11:71441441:- . NA TCGA-E9-A22D-01A-11R-A157-07 MICU2-ATP8A2 16 14 chr13:21603939:- chr13:25828118:+ INFRAME NA TCGA-E9-A22D-01A-11R-A157-07 CCDC90B-PLXDC1 7 34 chr11:83273647:- chr17:39109391:- INFRAME NA TCGA-E9-A22D-01A-11R-A157-07 UAP1-PTRH2 5 35 chr1:162581459:+ chr17:59674821:- . NA TCGA-E9-A22D-01A-11R-A157-07 ARSG-MAP2K6 8 21 chr17:68307087:+ chr17:69505780:+ . NA TCGA-E9-A22D-01A-11R-A157-07 MIR21-DHCR7 8 20 chr17:59841324:+ chr11:71441441:- . NA TCGA-E9-A22D-01A-11R-A157-07 PBX1-DHX40 3 33 chr1:164563311:+ chr17:59602522:+ FRAMESHIFT NA TCGA-E9-A22D-01A-11R-A157-07 ACACA-ASIC2 5 15 chr17:37257703:- chr17:33017684:- FRAMESHIFT NA TCGA-E9-A22D-01A-11R-A157-07 UFC1-ANO1 4 13 chr1:161154120:+ chr11:70167242:+ FRAMESHIFT NA TCGA-E9-A22D-01A-11R-A157-07 BMP2K-SLC4A4 3 10 chr4:78851056:+ chr4:71486948:+ INFRAME NA TCGA-E9-A22D-01A-11R-A157-07 VPS72-TSHZ2 3 8 chr1:151184317:- chr20:53487144:+ . NA TCGA-E9-A22E-01A-11R-A157-07 MAP3K1-PARN 16 14 chr5:56816055:+ chr16:14447081:- INFRAME Likely Oncogenic NA TCGA-E9-A22E-01A-11R-A157-07 ADIPOR1-CYB5R1 9 14 chr1:202958185:- chr1:202963727:- . NA TCGA-E9-A22E-01A-11R-A157-07 PITPNC1-KHDRBS3 2 10 chr17:67675542:+ chr8:135648540:+ . NA TCGA-E9-A22E-01A-11R-A157-07 CLNS1A-GAB2 1 1 chr11:77637590:- chr11:78227051:- INFRAME NA TCGA-E9-A22G-01A-11R-A157-07 ZWILCH-ATG16L2 9 30 chr15:66533013:+ chr11:72842617:+ . NA TCGA-E9-A22G-01A-11R-A157-07 GRB10-SLC2A13 6 10 chr7:50703821:- chr12:39760252:- INFRAME NA TCGA-E9-A22G-01A-11R-A157-07 PTK2-SLC30A8 1 14 chr8:140686632:- chr8:117006991:+ . NA TCGA-E9-A22G-01A-11R-A157-07 TRPS1-CHRAC1 2 5 chr8:115667874:- chr8:140514369:+ FRAMESHIFT NA TCGA-E9-A22G-01A-11R-A157-07 STOM-IDE 1 4 chr9:121370127:- chr10:92461252:- INFRAME NA TCGA-E9-A22G-01A-11R-A157-07 FHOD3-MOCOS 1 2 chr18:36298000:+ chr18:36195257:+ FRAMESHIFT NA TCGA-E9-A22H-01A-11R-A157-07 ORC6-VPS35 8 8 chr16:46691120:+ chr16:46683606:- INFRAME NA TCGA-E9-A22H-01A-11R-A157-07 EVA1C-HUNK 1 6 chr21:32467848:+ chr21:31946036:+ INFRAME NA TCGA-E9-A243-01A-21R-A169-07 ADIPOR1-RGS8 23 73 chr1:202943758:- chr1:182648303:- INFRAME NA TCGA-E9-A243-01A-21R-A169-07 SSH2-DTD1 19 81 chr17:29793894:- chr20:18744100:+ INFRAME NA TCGA-E9-A243-01A-21R-A169-07 ATAD2-PODXL 10 46 chr8:123339311:- chr7:131511433:- INFRAME NA TCGA-E9-A243-01A-21R-A169-07 HILPDA-SND1 11 40 chr7:128456023:+ chr7:128089489:+ . NA TCGA-E9-A243-01A-21R-A169-07 WARS2-TPST1 3 29 chr1:119076350:- chr7:66352505:+ INFRAME NA TCGA-E9-A243-01A-21R-A169-07 LIMCH1-UCHL1 1 17 chr4:41359803:+ chr4:41267987:+ . NA TCGA-E9-A243-01A-21R-A169-07 NFYC-SLC15A3 2 5 chr1:40691867:+ chr11:60946821:- . NA TCGA-E9-A243-01A-21R-A169-07 IFI16-GOLPH3L 2 1 chr1:159000395:+ chr1:150663763:- . NA TCGA-E9-A243-01A-21R-A169-07 MCM5-TOM1 1 5 chr22:35408563:+ chr22:35327271:+ FRAMESHIFT NA TCGA-E9-A244-01A-11R-A169-07 VTCN1-NUP88 70 138 chr1:117153091:- chr17:5388960:- FRAMESHIFT NA TCGA-E9-A244-01A-11R-A169-07 CTNND1-DDAH2 31 104 chr11:57762046:+ chr6:31728745:- . NA TCGA-E9-A244-01A-11R-A169-07 RNF168-SMCO1 23 59 chr3:196502873:- chr3:196508331:- FRAMESHIFT NA TCGA-E9-A244-01A-11R-A169-07 VGLL1-CD40LG 18 41 chrX:136550821:+ chrX:136659039:+ INFRAME NA TCGA-E9-A244-01A-11R-A169-07 SAMD8-C10orf11 7 20 chr10:75151106:+ chr10:76036008:+ INFRAME NA TCGA-E9-A244-01A-11R-A169-07 CSDE1-DENND2C 8 8 chr1:114749821:- chr1:114626188:- . NA TCGA-E9-A244-01A-11R-A169-07 DENND4C-NFIL3 4 13 chr9:19230833:+ chr9:91410906:- . NA TCGA-E9-A244-01A-11R-A169-07 EXOSC10-MTOR 5 3 chr1:11080499:- chr1:11117086:- FRAMESHIFT NA TCGA-E9-A244-01A-11R-A169-07 GABRP-KCNIP1 3 11 chr5:170789247:+ chr5:170720321:+ FRAMESHIFT NA TCGA-E9-A244-01A-11R-A169-07 TRAF3-RCOR1 3 6 chr14:102876525:+ chr14:102707351:+ INFRAME NA TCGA-E9-A244-01A-11R-A169-07 TSPAN15-SAMD8 2 9 chr10:69451690:+ chr10:75164645:+ FRAMESHIFT NA TCGA-E9-A247-01A-11R-A169-07 FAM3C-SUSD2 24 80 chr7:121371300:- chr22:24185094:+ INFRAME NA TCGA-E9-A247-01A-11R-A169-07 TOX3-PHKB 17 79 chr16:52546637:- chr16:47610826:+ FRAMESHIFT NA TCGA-E9-A247-01A-11R-A169-07 KIAA1671-C16orf87 3 36 chr22:25112462:+ chr16:46824482:- INFRAME NA TCGA-E9-A247-01A-11R-A169-07 FAS-CTNND2 1 4 chr10:89003194:+ chr5:11022979:- INFRAME NA TCGA-E9-A248-01A-11R-A169-07 LTV1-ATG5 139 337 chr6:143846224:+ chr6:106202089:- INFRAME NA TCGA-E9-A248-01A-11R-A169-07 ARID1B-PLEKHG1 29 220 chr6:156935576:+ chr6:150768638:+ INFRAME Likely Oncogenic NA TCGA-E9-A248-01A-11R-A169-07 SYNJ2-ZDHHC14 35 96 chr6:157982088:+ chr6:157542585:+ INFRAME NA TCGA-E9-A248-01A-11R-A169-07 TBC1D32-CCDC162P 6 22 chr6:121279121:- chr6:109183927:+ . NA TCGA-E9-A248-01A-11R-A169-07 HIVEP2-MTHFD1L 4 20 chr6:142945944:- chr6:151034493:+ . NA TCGA-E9-A248-01A-11R-A169-07 LIN28B-USP45 3 17 chr6:104958286:+ chr6:99476230:- INFRAME NA TCGA-E9-A248-01A-11R-A169-07 PLD3-SIRT2 3 13 chr19:40348768:+ chr19:38893867:- . NA TCGA-E9-A248-01A-11R-A169-07 SYNJ2-CDK19 3 9 chr6:158066635:+ chr6:110746201:- INFRAME NA TCGA-E9-A248-01A-11R-A169-07 FAM208B-NET1 1 12 chr10:5761471:+ chr10:5429170:+ FRAMESHIFT NA TCGA-E9-A248-01A-11R-A169-07 C10orf76-PRKG1 2 5 chr10:102056085:- chr10:52271350:+ . NA TCGA-E9-A248-01A-11R-A169-07 ARHGAP18-CEP85L 1 6 chr6:129710024:- chr6:118664521:- . NA TCGA-E9-A248-01A-11R-A169-07 KATNAL1-WASF3 1 6 chr13:30307331:- chr13:26667517:+ . NA TCGA-E9-A248-01A-11R-A169-07 MTHFD1L-THEMIS 2 2 chr6:150866049:+ chr6:127855188:- FRAMESHIFT NA TCGA-E9-A248-01A-11R-A169-07 TIAM1-NRIP1 1 6 chr21:31266010:- chr21:14968526:- . NA TCGA-E9-A248-01A-11R-A169-07 PLEKHG1-SAMD5 1000 1000 chr6:150768737:+ chr6:147564393:+ . NA TCGA-E9-A295-01A-11R-A16F-07 UMAD1-MRAP 15 20 chr7:7673453:+ chr21:32306640:+ INFRAME NA TCGA-E9-A295-01A-11R-A16F-07 ZNF14-RGL3 2 7 chr19:19732956:- chr19:11402706:- INFRAME NA TCGA-E9-A295-01A-11R-A16F-07 CD59-CSTF3 2 3 chr11:33710206:- chr11:33141986:- INFRAME NA TCGA-E9-A2JS-01A-11R-A180-07 TRAK1-CRNDE 12 137 chr3:42125614:+ chr16:54853568:- . NA TCGA-E9-A2JS-01A-11R-A180-07 PTP4A1-EYS 3 5 chr6:63576985:+ chr6:64822822:- FRAMESHIFT NA TCGA-E9-A3HO-01A-11R-A213-07 TAGLN2-PBX1 1 15 chr1:159919274:- chr1:164682310:+ . NA TCGA-E9-A3HO-01A-11R-A213-07 SCAI-TOX3 2 8 chr9:125142633:- chr16:52450546:- FRAMESHIFT NA TCGA-E9-A3HO-01A-11R-A213-07 NECTIN2-NOC4L 1 1 chr19:44846613:+ chr12:132150981:+ INFRAME NA TCGA-E9-A3QA-01A-61R-A22K-07 MCUR1-S100A10 41 149 chr6:13800341:- chr1:151986251:- . NA TCGA-E9-A3QA-01A-61R-A22K-07 PTPRM-KCTD1 1 16 chr18:7926683:+ chr18:26459925:- INFRAME NA TCGA-E9-A3QA-01A-61R-A22K-07 RAD9A-SSH3 1 14 chr11:67321333:+ chr11:67309397:+ . NA TCGA-E9-A3QA-01A-61R-A22K-07 TXLNB-CDC14A 2 8 chr6:139276830:- chr1:100484292:+ FRAMESHIFT NA TCGA-E9-A3QA-01A-61R-A22K-07 CCZ1-ZNF815P 1 10 chr7:5919966:+ chr7:5833527:+ . NA TCGA-E9-A3QA-01A-61R-A22K-07 NFX1-SPINK4 1 7 chr9:33319127:+ chr9:33218365:+ . NA TCGA-E9-A3QA-01A-61R-A22K-07 HIST4H4-PCCB 1 3 chr12:14770679:- chr3:136283837:+ . NA TCGA-E9-A54Y-01A-11R-A466-07 GINS4-UQCRC2 8 44 chr8:41530298:+ chr16:21983088:+ INFRAME NA TCGA-E9-A5FK-01A-11R-A27Q-07 AHCYL1-DENND2D 3 6 chr1:109985172:+ chr1:111194726:- INFRAME NA TCGA-E9-A5FL-01A-11R-A27Q-07 PMM2-UBFD1 5 54 chr16:8813106:+ chr16:23562206:+ INFRAME NA TCGA-E9-A5FL-01A-11R-A27Q-07 STK3-POLR2K 4 9 chr8:98825515:- chr8:100151347:+ . NA TCGA-E9-A5FL-01A-11R-A27Q-07 MKL2-SHISA9 2 5 chr16:14079354:+ chr16:13203394:+ . NA TCGA-E9-A5FL-01A-11R-A27Q-07 CASP7-VTI1A 2 4 chr10:113697603:+ chr10:112527087:+ FRAMESHIFT NA TCGA-E9-A5FL-01A-11R-A27Q-07 GPR155-CHRNA1 2 4 chr2:174461402:- chr2:174784869:- . NA TCGA-E9-A5FL-01A-11R-A27Q-07 GGH-ZFAND1 1 1 chr8:63017493:- chr8:81718224:- INFRAME NA TCGA-E9-A5UO-01A-11R-A28M-07 ATP2B1-KCNC2 4 34 chr12:89611193:- chr12:75048317:- FRAMESHIFT NA TCGA-E9-A5UO-01A-11R-A28M-07 ATXN1-HMGCLL1 5 25 chr6:16485972:- chr6:55542140:- . NA TCGA-E9-A5UO-01A-11R-A28M-07 ETFA-STRA6 2 25 chr15:76274412:- chr15:74202282:- INFRAME NA TCGA-E9-A5UO-01A-11R-A28M-07 FGD6-NUP37 4 12 chr12:95152811:- chr12:102085856:- FRAMESHIFT NA TCGA-E9-A5UO-01A-11R-A28M-07 ENPP5-EPYC 4 8 chr6:46165387:- chr12:90964326:- FRAMESHIFT NA TCGA-E9-A5UO-01A-11R-A28M-07 CIC-MEGF8 1000 1000 chr19:42274264:+ chr19:42351216:+ INFRAME Likely Oncogenic NA TCGA-EW-A1IW-01A-11R-A13Q-07 ATG2A-NRXN2 111 255 chr11:64901962:- chr11:64713943:- . NA TCGA-EW-A1IW-01A-11R-A13Q-07 MS4A7-ATG2A 24 32 chr11:60383288:+ chr11:64914500:- INFRAME NA TCGA-EW-A1IW-01A-11R-A13Q-07 SDHAF2-MAJIN 9 35 chr11:61438113:+ chr11:64960135:- . NA TCGA-EW-A1IW-01A-11R-A13Q-07 TPCN2-RARA 7 21 chr11:69062990:+ chr17:40330857:+ . NA TCGA-EW-A1IW-01A-11R-A13Q-07 ZRANB2-MTUS2 7 5 chr1:71080940:- chr13:29024457:+ . NA TCGA-EW-A1IW-01A-11R-A13Q-07 MED1-FBXO47 5 12 chr17:39434249:- chr17:38938732:- FRAMESHIFT NA TCGA-EW-A1IW-01A-11R-A13Q-07 SPEN-CNIH3 3 9 chr1:15929156:+ chr1:224739329:+ FRAMESHIFT Likely Oncogenic NA TCGA-EW-A1IW-01A-11R-A13Q-07 MYO1D-ORMDL3 2 3 chr17:32711988:- chr17:39924225:- . NA TCGA-EW-A1IX-01A-12R-A144-07 NSD3-ZMAT4 49 240 chr8:38314647:- chr8:40532238:- FRAMESHIFT NA TCGA-EW-A1IX-01A-12R-A144-07 AHI1-CHEK2 3 16 chr6:135323162:- chr22:28725367:- INFRAME NA TCGA-EW-A1IX-01A-12R-A144-07 SNX14-NKAIN2 4 7 chr6:85593579:- chr6:124283005:+ FRAMESHIFT NA TCGA-EW-A1IZ-01A-11R-A13Q-07 MLH1-GOLGA4 4 6 chr3:37008905:+ chr3:37335053:+ FRAMESHIFT Likely Oncogenic NA TCGA-EW-A1J1-01A-11R-A13Q-07 ATP6V0A1-MSI2 23 66 chr17:42483131:+ chr17:57529676:+ INFRAME NA TCGA-EW-A1J1-01A-11R-A13Q-07 CLTC-OTOP3 20 62 chr17:59683756:+ chr17:74946661:+ FRAMESHIFT NA TCGA-EW-A1J1-01A-11R-A13Q-07 USP32-ELOF1 15 64 chr17:60205447:- chr19:11554365:- INFRAME NA TCGA-EW-A1J1-01A-11R-A13Q-07 ARHGAP23-TEX14 1 9 chr17:38486140:+ chr17:58630554:- INFRAME NA TCGA-EW-A1J1-01A-11R-A13Q-07 CCDC57-NPLOC4 2 4 chr17:82151560:- chr17:81559416:- INFRAME NA TCGA-EW-A1J1-01A-11R-A13Q-07 ZC3H7A-SKIL 2 1 chr16:11797124:- chr3:170359699:+ . NA TCGA-EW-A1J1-01A-11R-A13Q-07 TIMP2-MSI2 1 3 chr17:78924959:- chr17:57596868:+ INFRAME NA TCGA-EW-A1J1-01A-11R-A13Q-07 USP6-ELOF1 1000 1000 chr17:5148767:+ chr19:11554365:- INFRAME NA TCGA-EW-A1J2-01A-21R-A13Q-07 ARNT2-PDLIM5 12 36 chr15:80404546:+ chr4:94618004:+ FRAMESHIFT NA TCGA-EW-A1J2-01A-21R-A13Q-07 TBC1D22B-YPEL1 7 12 chr6:37317206:+ chr22:21701218:- INFRAME NA TCGA-EW-A1J2-01A-21R-A13Q-07 HUNK-MRAP 4 5 chr21:31924760:+ chr21:32306640:+ FRAMESHIFT NA TCGA-EW-A1J3-01A-11R-A13Q-07 PPFIA1-RHOD 224 559 chr11:70272436:+ chr11:67065896:+ INFRAME NA TCGA-EW-A1J3-01A-11R-A13Q-07 MED24-TNS4 97 405 chr17:40051510:- chr17:40477400:- . NA TCGA-EW-A1J3-01A-11R-A13Q-07 RARA-PSMD3 41 192 chr17:40331396:+ chr17:39994954:+ FRAMESHIFT NA TCGA-EW-A1J3-01A-11R-A13Q-07 RARA-STAT3 11 110 chr17:40309286:+ chr17:42348520:- . NA TCGA-EW-A1J3-01A-11R-A13Q-07 FBXL20-CDK12 11 52 chr17:39258305:- chr17:39509705:+ . Likely Oncogenic NA TCGA-EW-A1J5-01A-11R-A13Q-07 PAPD5-SHANK2 169 719 chr16:50216195:+ chr11:71147338:- . NA TCGA-EW-A1J5-01A-11R-A13Q-07 TESMIN-PPFIA1 11 37 chr11:68738700:- chr11:70362095:+ INFRAME NA TCGA-EW-A1J6-01A-11R-A13Q-07 PI15-GDAP1 7 20 chr8:74825522:+ chr8:74488678:+ . NA TCGA-EW-A1J6-01A-11R-A13Q-07 DERA-LRP6 2 16 chr12:15982436:+ chr12:12149153:- FRAMESHIFT NA TCGA-EW-A1J6-01A-11R-A13Q-07 FBXO38-CDC42SE2 1 1 chr5:148441237:+ chr5:131385543:+ FRAMESHIFT NA TCGA-EW-A1OV-01A-11R-A144-07 SPAG9-SKAP1 11 67 chr17:51079584:- chr17:48189500:- INFRAME NA TCGA-EW-A1OV-01A-11R-A144-07 KCNMA1-ECD 4 14 chr10:77183421:- chr10:73163950:- . NA TCGA-EW-A1OV-01A-11R-A144-07 SGMS1-PSMB2 4 9 chr10:50433476:- chr1:35636432:- . NA TCGA-EW-A1OV-01A-11R-A144-07 PCNX2-COG2 3 7 chr1:233160283:- chr1:230683574:+ FRAMESHIFT NA TCGA-EW-A1OV-01A-11R-A144-07 SLC30A7-HHIPL2 4 3 chr1:100913806:+ chr1:222532111:- FRAMESHIFT NA TCGA-EW-A1OV-01A-11R-A144-07 COG2-PCNX2 2 6 chr1:230679052:+ chr1:233139855:- FRAMESHIFT NA TCGA-EW-A1OV-01A-11R-A144-07 ILF3-ZNF627 1 2 chr19:10677310:+ chr19:11575250:+ . NA TCGA-EW-A1OX-01A-11R-A144-07 BCAS3-ABCA8 15 77 chr17:60808076:+ chr17:68869779:- INFRAME NA TCGA-EW-A1OX-01A-11R-A144-07 TBCD-STXBP4 5 15 chr17:82906053:+ chr17:55141310:+ FRAMESHIFT NA TCGA-EW-A1OX-01A-11R-A144-07 ZNF652-CD300LD 3 12 chr17:49316826:- chr17:74582311:- FRAMESHIFT NA TCGA-EW-A1OX-01A-11R-A144-07 PPM1D-EFCAB3 3 9 chr17:60633977:+ chr17:62369171:+ . NA TCGA-EW-A1OX-01A-11R-A144-07 TBCD-FN3KRP 1 11 chr17:82909307:+ chr17:82726833:+ FRAMESHIFT NA TCGA-EW-A1OY-01A-11R-A144-07 ETHE1-UGT2A3 1 9 chr19:43526201:- chr4:68932759:- INFRAME NA TCGA-EW-A1OZ-01A-11R-A144-07 PIK3CB-TSPO 45 147 chr3:138796463:- chr22:43159210:+ . Likely Oncogenic NA TCGA-EW-A1OZ-01A-11R-A144-07 ANK3-UBE2I 24 51 chr10:60508474:- chr16:1324730:+ . NA TCGA-EW-A1OZ-01A-11R-A144-07 TOM1L2-ANK3 10 38 chr17:17972262:- chr10:60508625:- . NA TCGA-EW-A1OZ-01A-11R-A144-07 KIAA0930-ANK3 11 19 chr22:45240640:- chr10:60139087:- INFRAME NA TCGA-EW-A1OZ-01A-11R-A144-07 GABARAP-MYOCD 7 14 chr17:7241342:- chr17:12736161:+ FRAMESHIFT NA TCGA-EW-A1OZ-01A-11R-A144-07 SEPT9-UBE2L5P 7 9 chr17:77307197:+ chr13:30426725:+ . NA TCGA-EW-A1OZ-01A-11R-A144-07 MAPK1IP1L-KRTAP4-1 3 16 chr14:55051803:+ chr17:41185321:- . NA TCGA-EW-A1OZ-01A-11R-A144-07 SEPT9-LPP 3 9 chr17:77307197:+ chr3:188484592:+ INFRAME NA TCGA-EW-A1OZ-01A-11R-A144-07 LYRM9-NSRP1 2 8 chr17:27882569:- chr17:30172542:+ INFRAME NA TCGA-EW-A1OZ-01A-11R-A144-07 DRG2-ZNF624 1 9 chr17:18093973:+ chr17:16624509:- FRAMESHIFT NA TCGA-EW-A1OZ-01A-11R-A144-07 SAR1A-CDK12 2 5 chr10:70157764:- chr17:39490557:+ FRAMESHIFT Likely Oncogenic NA TCGA-EW-A1OZ-01A-11R-A144-07 NLK-VBP1 1 4 chr17:28043331:+ chrX:155236229:+ FRAMESHIFT NA TCGA-EW-A1OZ-01A-11R-A144-07 CREB3L2-LASP1 1 2 chr7:137884995:- chr17:38898412:+ FRAMESHIFT NA TCGA-EW-A1P0-01A-11R-A144-07 PTPN9-AGBL1 14 38 chr15:75508917:- chr15:86674273:+ INFRAME NA TCGA-EW-A1P0-01A-11R-A144-07 GNB5-PDE6D 8 45 chr15:52141140:- chr2:231739202:- . NA TCGA-EW-A1P0-01A-11R-A144-07 SLIT3-HSD17B4 2 26 chr5:168883265:- chr5:119456315:+ INFRAME NA TCGA-EW-A1P0-01A-11R-A144-07 MAP2K5-ADAMTSL3 3 18 chr15:67748601:+ chr15:83704389:+ INFRAME NA TCGA-EW-A1P0-01A-11R-A144-07 TMOD3-EIF4E2 3 10 chr15:51829836:+ chr2:232556416:+ . NA TCGA-EW-A1P0-01A-11R-A144-07 AKAP13-NRG1 1 17 chr15:85543955:+ chr8:32595828:+ FRAMESHIFT NA TCGA-EW-A1P3-01A-11R-A144-07 AIM1-MYB 9 17 chr6:106361081:+ chr6:135192324:+ INFRAME NA TCGA-EW-A1P3-01A-11R-A144-07 MED13L-TRAFD1 1 8 chr12:116237468:- chr12:112134738:+ FRAMESHIFT NA TCGA-EW-A1P4-01A-21R-A144-07 MEX3D-DCTN6 47 116 chr19:1567464:- chr8:30175085:+ INFRAME NA TCGA-EW-A1P4-01A-21R-A144-07 MEX3D-LEPROTL1 47 106 chr19:1567464:- chr8:30175085:+ . NA TCGA-EW-A1P4-01A-21R-A144-07 KCMF1-PRKDC 8 77 chr2:85028056:+ chr8:47859759:- INFRAME NA TCGA-EW-A1P4-01A-21R-A144-07 TFDP2-PLD1 4 21 chr3:142093061:- chr3:171789535:- . NA TCGA-EW-A1P4-01A-21R-A144-07 BZW2-KLHL7 1 10 chr7:16704669:+ chr7:23155991:+ FRAMESHIFT NA TCGA-EW-A1P4-01A-21R-A144-07 LDLR-ZNF333 2 3 chr19:11120522:+ chr19:14731175:+ FRAMESHIFT NA TCGA-EW-A1P4-01A-21R-A144-07 EIF3B-C3orf33 1 5 chr7:2372795:+ chr3:155767669:- INFRAME NA TCGA-EW-A1P5-01A-11R-A144-07 VPS13B-SNX31 2 7 chr8:99170163:+ chr8:100636011:- FRAMESHIFT NA TCGA-EW-A1P6-01A-11R-A144-07 CAPS2-GLIPR1 1 7 chr12:75390322:- chr12:75481834:+ INFRAME NA TCGA-EW-A1P7-01A-21R-A144-07 RLF-ZMPSTE24 10 77 chr1:40161636:+ chr1:40290854:+ INFRAME NA TCGA-EW-A1P7-01A-21R-A144-07 TLK1-CAT 3 15 chr2:171117739:- chr11:34449192:+ INFRAME NA TCGA-EW-A1P8-01A-11R-A144-07 MIR4435-2HG-RUFY1 10 36 chr2:111494885:- chr5:179601892:+ . NA TCGA-EW-A1P8-01A-11R-A144-07 CHODL-ANKRD30BP2 1 20 chr21:17917400:+ chr21:13051796:+ . NA TCGA-EW-A1P8-01A-11R-A144-07 GOLPH3L-CHRM3 1 6 chr1:150661814:- chr1:239492709:+ . NA TCGA-EW-A1PA-01A-11R-A144-07 TMEM104-DNAI2 55 65 chr17:74795632:+ chr17:74314121:+ INFRAME NA TCGA-EW-A1PA-01A-11R-A144-07 TMC6-FAM104A 1 23 chr17:78128659:- chr17:73209768:- . NA TCGA-EW-A1PA-01A-11R-A144-07 MKNK2-FAM151A 4 10 chr19:2046186:- chr1:54610555:- FRAMESHIFT NA TCGA-EW-A1PA-01A-11R-A144-07 TSTD3-TSHZ2 4 9 chr6:99521147:+ chr20:53487144:+ . NA TCGA-EW-A1PA-01A-11R-A144-07 ZMYND8-C2orf27AP1 3 12 chr20:47347856:- chrY:11086054:- . NA TCGA-EW-A1PA-01A-11R-A144-07 ZNF813-TOP1 4 6 chr19:53467789:+ chr20:41112782:+ . Likely Oncogenic NA TCGA-EW-A1PB-01A-11R-A144-07 ETV6-YTHDF2 359 458 chr12:11839304:+ chr1:28768929:+ FRAMESHIFT Likely Oncogenic NA TCGA-EW-A1PB-01A-11R-A144-07 HIST4H4-MGP 24 115 chr12:14770679:- chr12:14884245:- . NA TCGA-EW-A1PB-01A-11R-A144-07 PSPH-PHKG1 12 52 chr7:56051138:- chr7:56088975:- . NA TCGA-EW-A1PB-01A-11R-A144-07 PGS1-BIRC5 13 42 chr17:78399537:+ chr17:78223465:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ZNF385B-SCG5 8 62 chr2:179769503:- chr15:32679766:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ABR-STAP2 6 13 chr17:1179667:- chr19:4338944:- . NA TCGA-EW-A1PB-01A-11R-A144-07 GABRP-KCNIP1 4 18 chr5:170797548:+ chr5:170718758:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 GUK1-TPPP 5 11 chr1:228145624:+ chr5:678064:- . NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A1 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A10 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A3 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A4 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A5 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A6 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A7 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A8 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 ASMTL-UGT1A9 5 9 chrY:1452748:- chr2:233767034:+ INFRAME NA TCGA-EW-A1PB-01A-11R-A144-07 SHROOM3-FIP1L1 3 12 chr4:76586469:+ chr4:53383773:+ . NA TCGA-EW-A1PB-01A-11R-A144-07 ZNF345-TRIM21 2 8 chr19:36892985:+ chr11:4390458:- . NA TCGA-EW-A1PB-01A-11R-A144-07 IGF2BP2-NCEH1 1 4 chr3:185823153:- chr3:172648114:- FRAMESHIFT NA TCGA-EW-A1PG-01A-11R-A144-07 PALMD-CCDC171 4 1 chr1:99667766:+ chr9:15777600:+ FRAMESHIFT NA TCGA-EW-A1PH-01A-11R-A14M-07 BAG4-NEDD8 10 322 chr8:38177139:+ chr14:24218431:- INFRAME NA TCGA-EW-A1PH-01A-11R-A14M-07 NSD3-ADAM32 29 150 chr8:38281467:- chr8:39274312:+ FRAMESHIFT NA TCGA-EW-A1PH-01A-11R-A14M-07 ATF6-SH2D1B 34 95 chr1:161802272:+ chr1:162397315:- INFRAME NA TCGA-EW-A1PH-01A-11R-A14M-07 LTBP4-MYO1B 12 39 chr19:40614446:+ chr2:191414048:+ FRAMESHIFT NA TCGA-EW-A1PH-01A-11R-A14M-07 PLD3-ACTN4 13 35 chr19:40348768:+ chr19:38708117:+ . NA TCGA-EW-A1PH-01A-11R-A14M-07 TSTD1-LSM14A 7 5 chr1:161038880:- chr19:34194478:+ INFRAME NA TCGA-EW-A1PH-01A-11R-A14M-07 PUM1-SDC3 3 20 chr1:31059204:- chr1:30878740:- INFRAME NA TCGA-EW-A1PH-01A-11R-A14M-07 NF2-CLTCL1 2 11 chr22:29683064:+ chr22:19183611:- . Likely Oncogenic NA TCGA-EW-A1PH-01A-11R-A14M-07 RMND5A-CD8A 3 7 chr2:86773435:+ chr2:86785971:- . NA TCGA-EW-A1PH-01A-11R-A14M-07 SHROOM3-TRIM28 3 6 chr4:76710287:+ chr19:58548862:+ FRAMESHIFT NA TCGA-EW-A1PH-01A-11R-A14M-07 ATF6-SPATA46 1 9 chr1:161802272:+ chr1:162375403:- FRAMESHIFT NA TCGA-EW-A1PH-01A-11R-A14M-07 SPIDR-UBE2V2 1 7 chr8:47440542:+ chr8:48043033:+ INFRAME NA TCGA-EW-A1PH-01A-11R-A14M-07 ZNF569-PRRC2C 1 5 chr19:37444907:- chr1:171574927:+ INFRAME NA TCGA-EW-A2FR-01A-11R-A21T-07 SIK3-PPP1R1B 75 139 chr11:117098143:- chr17:39629170:+ INFRAME NA TCGA-EW-A2FR-01A-11R-A21T-07 SDHAF2-ACTN3 4 37 chr11:61430182:+ chr11:66551239:+ INFRAME NA TCGA-EW-A2FR-01A-11R-A21T-07 HECTD1-SCFD1 5 15 chr14:31156840:- chr14:30707990:+ FRAMESHIFT NA TCGA-EW-A2FR-01A-11R-A21T-07 ASH2L-PPP1R14A 3 16 chr8:38119363:+ chr19:38251446:- FRAMESHIFT NA TCGA-EW-A2FR-01A-11R-A21T-07 HAUS8-C19orf57 2 16 chr19:17059557:- chr19:13890462:- INFRAME NA TCGA-EW-A2FR-01A-11R-A21T-07 SEZ6L2-NAP1L4P2 3 7 chr16:29898941:- chrX:106466688:- . NA TCGA-EW-A2FR-01A-11R-A21T-07 NSD3-NEGR1 3 6 chr8:38381799:- chr1:71776297:- . NA TCGA-EW-A2FR-01A-11R-A21T-07 DOLPP1-TBC1D13 1 12 chr9:129081207:+ chr9:128797055:+ FRAMESHIFT NA TCGA-EW-A2FR-01A-11R-A21T-07 LENG8-LAIR1 1 12 chr19:54449306:+ chr19:54356966:- . NA TCGA-EW-A2FR-01A-11R-A21T-07 MIEN1-BARX2 2 6 chr17:39729685:- chr11:129436751:+ FRAMESHIFT NA TCGA-EW-A2FR-01A-11R-A21T-07 STRN3-SNTG1 2 2 chr14:31025904:- chr8:49910892:+ . NA TCGA-EW-A2FR-01A-11R-A21T-07 CPSF6-ZBTB1 1 2 chr12:69262562:+ chr14:64521487:+ . NA TCGA-EW-A2FS-01A-11R-A17B-07 FCHSD2-NRG1-IT1 5 16 chr11:72887470:- chr8:32139215:+ . NA TCGA-EW-A2FS-01A-11R-A17B-07 EXOC7-USP22 5 5 chr17:76101271:- chr17:21007996:- FRAMESHIFT NA TCGA-EW-A2FS-01A-11R-A17B-07 BAX-DHDH 2 13 chr19:48956333:+ chr19:48935000:+ INFRAME NA TCGA-EW-A2FS-01A-11R-A17B-07 EXOC7-ST6GALNAC2 3 5 chr17:76083690:- chr17:76566271:- INFRAME NA TCGA-EW-A2FS-01A-11R-A17B-07 SHANK2-ARHGEF17 2 8 chr11:70698688:- chr11:73346883:+ INFRAME NA TCGA-EW-A2FS-01A-11R-A17B-07 YPEL2-B4GALNT2 2 2 chr17:59353526:+ chr17:49152800:+ FRAMESHIFT NA TCGA-EW-A2FS-01A-11R-A17B-07 NIF3L1-ORC2 1 3 chr2:200893408:+ chr2:200913992:- INFRAME NA TCGA-EW-A2FS-01A-11R-A17B-07 SPAG9-SKAP1 1 2 chr17:51047375:- chr17:48137337:- FRAMESHIFT NA TCGA-EW-A2FV-01A-11R-A17B-07 PAK4-SPINT2 52 70 chr19:39125919:+ chr19:38283627:+ . NA TCGA-EW-A2FV-01A-11R-A17B-07 ZNF587B-ZSCAN4 7 79 chr19:57839149:+ chr19:57676041:+ . NA TCGA-EW-A2FV-01A-11R-A17B-07 ZNF586-ZSCAN4 1 34 chr19:57769878:+ chr19:57676041:+ . NA TCGA-EW-A2FV-01A-11R-A17B-07 STK4-TSHZ2 2 21 chr20:44987296:+ chr20:53487144:+ . NA TCGA-EW-A2FV-01A-11R-A17B-07 PPP1R12C-ZNF579 3 11 chr19:55092838:- chr19:55577452:- . NA TCGA-EW-A2FV-01A-11R-A17B-07 TRIM37-PCTP 1 17 chr17:59106441:- chr17:55767335:+ INFRAME NA TCGA-EW-A2FV-01A-11R-A17B-07 ACE-MAP3K3 1 5 chr17:63484541:+ chr17:63652557:+ INFRAME NA TCGA-EW-A2FW-01A-11R-A17B-07 ARHGAP32-C20orf24 21 80 chr11:129062280:- chr20:36607715:+ INFRAME NA TCGA-EW-A2FW-01A-11R-A17B-07 CPT1A-KCNG1 7 31 chr11:68780640:- chr20:51012416:- . NA TCGA-EW-A2FW-01A-11R-A17B-07 PLCG1-TAF4 5 8 chr20:41137858:+ chr20:62009174:- FRAMESHIFT NA TCGA-EW-A2FW-01A-11R-A17B-07 FAM69A-NTNG1 3 11 chr1:92961376:- chr1:107480611:+ FRAMESHIFT NA TCGA-EW-A2FW-01A-11R-A17B-07 PTPN1-ROMO1 3 9 chr20:50574654:+ chr20:35699633:+ INFRAME NA TCGA-EW-A2FW-01A-11R-A17B-07 ERGIC3-TRMT6 2 7 chr20:35548865:+ chr20:5946533:- FRAMESHIFT NA TCGA-EW-A2FW-01A-11R-A17B-07 UQCC1-CRLS1 1 4 chr20:35347164:- chr20:6032012:+ INFRAME NA TCGA-EW-A2FW-01A-11R-A17B-07 NARS2-SERINC3 1000 1000 chr11:78436525:- chr20:44522109:- . NA TCGA-EW-A423-01A-11R-A24H-07 PPP6R3-GUCY2EP 2 27 chr11:68519651:+ chr11:76713186:- . NA TCGA-EW-A423-01A-11R-A24H-07 ANKRD30A-FAM227B 1 24 chr10:37181516:+ chr15:49331849:- FRAMESHIFT NA TCGA-EW-A423-01A-11R-A24H-07 RNF169-ANAPC15 3 6 chr11:74789699:+ chr11:72111496:- . NA TCGA-EW-A423-01A-11R-A24H-07 ZNF280D-RNF111 1 9 chr15:56642952:- chr15:59092537:+ INFRAME NA TCGA-EW-A423-01A-11R-A24H-07 SLC35E4-HSCB 1 4 chr22:30637069:+ chr22:28751241:+ INFRAME NA TCGA-EW-A6S9-01A-22R-A33J-07 RARA-COL10A1 17 53 chr17:40331396:+ chr6:116125507:- . NA TCGA-EW-A6S9-01A-22R-A33J-07 RARA-TSPYL4 10 81 chr17:40331396:+ chr6:116250418:- . NA TCGA-EW-A6S9-01A-22R-A33J-07 CDK12-JAK2 19 44 chr17:39471763:+ chr9:5126333:+ FRAMESHIFT Likely Oncogenic NA TCGA-EW-A6S9-01A-22R-A33J-07 KDM4C-ARMC2 4 19 chr9:6893232:+ chr6:108899694:+ FRAMESHIFT NA TCGA-EW-A6S9-01A-22R-A33J-07 ATG5-AK9 3 21 chr6:106248150:- chr6:109659413:- INFRAME NA TCGA-EW-A6S9-01A-22R-A33J-07 STAT5B-ACSF2 4 3 chr17:42276248:- chr17:50460677:+ . NA TCGA-EW-A6S9-01A-22R-A33J-07 TLK2P1-YWHAEP7 3 6 chr17:34039341:- chr17:37855228:- . NA TCGA-EW-A6S9-01A-22R-A33J-07 NLK-DUSP14 1 9 chr17:28043331:+ chr17:37510677:+ . NA TCGA-EW-A6S9-01A-22R-A33J-07 PMS1-GCG 1 4 chr2:189805754:+ chr2:162147514:- FRAMESHIFT NA TCGA-EW-A6S9-01A-22R-A33J-07 CNOT6-FGF18 1 3 chr5:180494763:+ chr5:171436093:+ . NA TCGA-EW-A6S9-01A-22R-A33J-07 CCDC61-FUT2 1000 1000 chr19:46008301:+ chr19:48702955:+ . NA TCGA-EW-A6SB-01A-12R-A32P-07 RHOA-SMCO1 18 36 chr3:49411820:- chr3:196509669:- . NA TCGA-EW-A6SB-01A-12R-A32P-07 TRPS1-SPAG1 7 26 chr8:115587001:- chr8:100240403:+ INFRAME NA TCGA-EW-A6SB-01A-12R-A32P-07 CAPZB-EMC1 6 17 chr1:19356635:- chr1:19227450:- INFRAME NA TCGA-EW-A6SB-01A-12R-A32P-07 ZC3H7B-L3MBTL2 3 15 chr22:41327364:+ chr22:41209696:+ INFRAME NA TCGA-EW-A6SB-01A-12R-A32P-07 NUBPL-SCFD1 2 10 chr14:31565048:+ chr14:30694773:+ INFRAME NA TCGA-EW-A6SB-01A-12R-A32P-07 UIMC1-PTPRO 1 11 chr5:177006539:- chr12:15557455:+ . NA TCGA-EW-A6SC-01A-12R-A32P-07 UBE2Z-UTP18 15 133 chr17:48922937:+ chr17:51293903:+ INFRAME NA TCGA-EW-A6SC-01A-12R-A32P-07 CLMN-EVL 25 85 chr14:95319711:- chr14:100084687:+ FRAMESHIFT NA TCGA-EW-A6SC-01A-12R-A32P-07 RNF169-CALCOCO2 7 68 chr11:74817714:+ chr17:48841698:+ . NA TCGA-EW-A6SC-01A-12R-A32P-07 KDM2A-GDPD4 3 39 chr11:67215949:+ chr11:77287420:- . NA TCGA-EW-A6SC-01A-12R-A32P-07 CALCOCO2-RCOR2 12 2 chr17:48831078:+ chr11:63916561:- . NA TCGA-EW-A6SC-01A-12R-A32P-07 TAF1B-FLJ31356 6 24 chr2:9845318:+ chr2:28387133:- . NA TCGA-EW-A6SC-01A-12R-A32P-07 LPCAT3-MYO15A 2 4 chr12:6981004:- chr17:18135711:+ FRAMESHIFT NA TCGA-EW-A6SD-01A-12R-A33J-07 WIPF2-SP2 217 856 chr17:40219492:+ chr17:47922962:+ . NA TCGA-EW-A6SD-01A-12R-A33J-07 PKP2-DNM1L 17 58 chr12:32841028:- chr12:32742589:+ INFRAME NA TCGA-EW-A6SD-01A-12R-A33J-07 LRBA-PPARGC1A 8 18 chr4:151014427:- chr4:23884931:- INFRAME NA TCGA-EW-A6SD-01A-12R-A33J-07 SRPK1-ANKRD42 3 31 chr6:35920468:- chr11:83227747:+ FRAMESHIFT NA TCGA-EW-A6SD-01A-12R-A33J-07 MSI2-DHX40 5 12 chr17:57401471:+ chr17:59566627:+ FRAMESHIFT NA TCGA-EW-A6SD-01A-12R-A33J-07 SOGA1-RBL1 1 14 chr20:36802856:- chr20:36998929:- INFRAME NA TCGA-EW-A6SD-01A-12R-A33J-07 TMEM14B-TFAP2A 3 6 chr6:10749698:+ chr6:10400589:- INFRAME NA TCGA-EW-A6SD-01A-12R-A33J-07 PITPNC1-RHOT1 3 4 chr17:67378202:+ chr17:32171043:+ FRAMESHIFT NA TCGA-EW-A6SD-01A-12R-A33J-07 REV3L-ARHGEF25 1 8 chr6:111482750:- chr12:57614689:+ FRAMESHIFT NA TCGA-GI-A2C8-01A-11R-A16F-07 MYO1D-TEX2 77 236 chr17:32876778:- chr17:64171199:- FRAMESHIFT NA TCGA-GI-A2C8-01A-11R-A16F-07 PBX1-LRRC52 25 182 chr1:164563311:+ chr1:165563505:+ INFRAME NA TCGA-GI-A2C8-01A-11R-A16F-07 NT5C2-C10orf120 10 18 chr10:103174858:- chr10:122699667:- FRAMESHIFT NA TCGA-GI-A2C8-01A-11R-A16F-07 TANC2-FAM222B 4 26 chr17:63074014:+ chr17:28766707:- . NA TCGA-GI-A2C8-01A-11R-A16F-07 R3HDM2-SUPT6H 6 17 chr12:57395749:- chr17:28693696:+ . NA TCGA-GI-A2C8-01A-11R-A16F-07 WT1-AS-SLC1A2 3 16 chr11:32435846:+ chr11:35317516:- . Likely Oncogenic NA TCGA-GI-A2C8-01A-11R-A16F-07 WT1-AS_1-SLC1A2 3 16 chr11:32435846:+ chr11:35317516:- . NA TCGA-GI-A2C8-01A-11R-A16F-07 RRM2B-ZFPM2 3 6 chr8:102218814:- chr8:105419144:+ FRAMESHIFT NA TCGA-GI-A2C8-01A-11R-A16F-07 TPD52-ANGPT1 3 5 chr8:80171425:- chr8:107322128:- FRAMESHIFT NA TCGA-GI-A2C8-01A-11R-A16F-07 UBXN1-C11orf80 2 9 chr11:62676813:- chr11:66816053:+ INFRAME NA TCGA-GI-A2C8-01A-11R-A16F-07 MAP2K4-CD79B 3 4 chr17:12054991:+ chr17:63931385:- FRAMESHIFT Likely Oncogenic NA TCGA-GI-A2C8-01A-11R-A16F-07 PDLIM1-SORBS1 2 8 chr10:95290820:- chr10:95410777:- INFRAME NA TCGA-GI-A2C8-01A-11R-A16F-07 PDHX-ELF5 1 7 chr11:34960518:+ chr11:34493712:- FRAMESHIFT NA TCGA-GI-A2C8-01A-11R-A16F-07 ELF5-EXT2 1 5 chr11:34493479:- chr11:44171611:+ FRAMESHIFT NA TCGA-GM-A2D9-01A-11R-A18M-07 TESMIN-SART1 3 3 chr11:68738700:- chr11:65978600:+ FRAMESHIFT NA TCGA-GM-A2D9-01A-11R-A18M-07 BPTF-PEBP1 1 9 chr17:67964404:+ chr12:118138039:+ INFRAME NA TCGA-GM-A2DB-01A-31R-A18M-07 POLR3E-C16orf52 65 42 chr16:22325795:+ chr16:22087293:+ . NA TCGA-GM-A2DB-01A-31R-A18M-07 ZC3H4-POLR2I 44 108 chr19:47093970:- chr19:36114412:- INFRAME NA TCGA-GM-A2DB-01A-31R-A18M-07 DHCR7-KRTAP5-11 8 37 chr11:71443993:- chr11:71582157:- . NA TCGA-GM-A2DB-01A-31R-A18M-07 PHKG2-RPL27 6 4 chr16:30748490:+ chr17:42998749:+ . NA TCGA-GM-A2DB-01A-31R-A18M-07 DNM2-ILF3 2 15 chr19:10823899:+ chr19:10688550:+ FRAMESHIFT NA TCGA-GM-A2DB-01A-31R-A18M-07 EIF2S1-GPHN 1 6 chr14:67374547:+ chr14:66824474:+ INFRAME NA TCGA-GM-A2DB-01A-31R-A18M-07 SPEN-DNAJC16 1 3 chr1:15922349:+ chr1:15567099:+ INFRAME Likely Oncogenic NA TCGA-GM-A2DB-01A-31R-A18M-07 ELMO3-ZDHHC1 1 2 chr16:67203583:+ chr16:67395566:- INFRAME NA TCGA-GM-A2DC-01A-11R-A18M-07 SH3GL1-ANKRD24 15 30 chr19:4400324:- chr19:4219591:+ INFRAME NA TCGA-GM-A2DC-01A-11R-A18M-07 MSRB2-MALRD1 3 10 chr10:23110318:+ chr10:19692282:+ INFRAME NA TCGA-GM-A2DC-01A-11R-A18M-07 SAMD4A-FRMD6-AS2 5 2 chr14:54702580:+ chr14:51584283:- . NA TCGA-GM-A2DD-01A-11R-A180-07 TBC1D5-TOP2B 4 10 chr3:17742481:- chr3:25601225:- . NA TCGA-GM-A2DD-01A-11R-A180-07 ZKSCAN1-CCDC136 4 9 chr7:100015726:+ chr7:128804650:+ . NA TCGA-GM-A2DD-01A-11R-A180-07 MARK3-SLC25A21 2 6 chr14:103475210:+ chr14:36875004:- FRAMESHIFT NA TCGA-GM-A2DD-01A-11R-A180-07 DUSP16-HEBP1 2 5 chr12:12562117:- chr12:12989415:- . NA TCGA-GM-A2DD-01A-11R-A180-07 CACNA1D-PRKCD 1 3 chr3:53501720:+ chr3:53183452:+ INFRAME NA TCGA-GM-A2DD-01A-11R-A180-07 ABCC10-PPP2R5D 1 2 chr6:43433360:+ chr6:43006463:+ INFRAME NA TCGA-GM-A2DF-01A-11R-A180-07 CUL4A-F7 10 87 chr13:113219488:+ chr13:113113752:+ . NA TCGA-GM-A2DF-01A-11R-A180-07 TUBGCP3-FARP1 15 63 chr13:112545699:- chr13:98446098:+ INFRAME NA TCGA-GM-A2DF-01A-11R-A180-07 WAC-UBAC2 12 42 chr10:28583505:+ chr13:99314097:+ INFRAME NA TCGA-GM-A2DF-01A-11R-A180-07 FCHSD2-UQCC3 3 12 chr11:73140031:- chr11:62671284:+ . NA TCGA-GM-A2DF-01A-11R-A180-07 TMBIM4-GRIP1 3 10 chr12:66169855:- chr12:66445508:- INFRAME NA TCGA-GM-A2DF-01A-11R-A180-07 KDM5C-HSD17B10 2 3 chrX:53217143:- chrX:53432411:- INFRAME Likely Oncogenic NA TCGA-GM-A2DF-01A-11R-A180-07 RNF126-ODF3L2 1 7 chr19:663047:- chr19:464364:- FRAMESHIFT NA TCGA-GM-A2DH-01A-11R-A180-07 BBX-RB1 9 42 chr3:107526398:+ chr13:48360017:+ . Likely Oncogenic NA TCGA-GM-A2DH-01A-11R-A180-07 LRBA-DDX60L 3 8 chr4:150415438:- chr4:168492885:- . NA TCGA-GM-A2DH-01A-11R-A180-07 SENP5-PIGX 2 9 chr3:196903610:+ chr3:196733759:+ INFRAME NA TCGA-GM-A2DH-01A-11R-A180-07 NFIA-DCLK1 1 11 chr1:61332586:+ chr13:35839176:- FRAMESHIFT NA TCGA-GM-A2DH-01A-11R-A180-07 METTL12-HK1 1 10 chr11:62665946:+ chr10:69343827:+ FRAMESHIFT NA TCGA-GM-A2DH-01A-11R-A180-07 TEC-PASD1 2 6 chr4:48269752:- chrX:151620930:+ . NA TCGA-GM-A2DK-01A-21R-A180-07 IGF1R-ADPGK 7 17 chr15:98708107:+ chr15:72771845:- FRAMESHIFT NA TCGA-GM-A2DK-01A-21R-A180-07 IL1RAPL1-MAGEB10 2 4 chrX:28789425:+ chrX:27817554:+ . NA TCGA-GM-A2DK-01A-21R-A180-07 MAP2K1-UCKL1 1 4 chr15:66444707:+ chr20:63946643:- FRAMESHIFT NA TCGA-GM-A2DL-01A-11R-A18M-07 GGA3-ATF7 5 12 chr17:75239789:- chr12:53508027:- . NA TCGA-GM-A2DL-01A-11R-A18M-07 TAF1D-TRIM49C 1 14 chr11:93741322:- chr11:90032397:+ . NA TCGA-GM-A2DL-01A-11R-A18M-07 TAF1D-TRIM49 1000 1000 chr11:93741323:- chr11:89807285:- . NA TCGA-GM-A2DM-01A-11R-A180-07 RUNDC1-CPB1 1000 1000 chr17:42956263:+ chr3:148859971:+ . NA TCGA-GM-A2DM-01A-11R-A180-07 ATP6AP1-CPB1 1000 1000 chrX:154436516:+ chr3:148834561:+ . NA TCGA-GM-A2DM-01A-11R-A180-07 TAOK2-CPB1 1000 1000 chr16:29986770:+ chr3:148854446:+ . NA TCGA-GM-A3NW-01A-21R-A22K-07 PROSC-DDHD2 3 34 chr8:37776016:+ chr8:38225240:+ . NA TCGA-GM-A3NW-01A-21R-A22K-07 OXCT1-DLEU2 3 8 chr5:41840451:- chr13:49997419:- . NA TCGA-GM-A3NW-01A-21R-A22K-07 PPP6R3-SPTBN2 2 6 chr11:68460827:+ chr11:66715981:- . NA TCGA-GM-A3NW-01A-21R-A22K-07 THAP12-ADAM2 1000 1000 chr11:76350225:- chr8:39777161:- . NA TCGA-GM-A3XL-01A-11R-A22U-07 CCNF-MALL 16 57 chr16:2433067:+ chr2:110085757:- FRAMESHIFT NA TCGA-GM-A3XL-01A-11R-A22U-07 TC2N-ATXN3 19 19 chr14:91812312:- chr14:92050536:- . NA TCGA-GM-A3XL-01A-11R-A22U-07 ANKRD11-LINGO1 11 41 chr16:89418284:- chr15:77615900:- . NA TCGA-GM-A3XL-01A-11R-A22U-07 GUK1-TARBP1 10 8 chr1:228140363:+ chr1:234467650:- INFRAME NA TCGA-GM-A3XL-01A-11R-A22U-07 WARS-MSH6 4 32 chr14:100337062:- chr2:47798611:+ INFRAME Likely Oncogenic NA TCGA-GM-A3XL-01A-11R-A22U-07 MAPK1-KCNJ4 7 13 chr22:21805850:- chr22:38428171:- . NA TCGA-GM-A3XL-01A-11R-A22U-07 WDR78-LRRC40 1 10 chr1:66924662:- chr1:70189273:- FRAMESHIFT NA TCGA-HN-A2NL-01A-11R-A18M-07 AFDN-KCNAB1 18 72 chr6:167827237:+ chr3:156514364:+ FRAMESHIFT NA TCGA-HN-A2NL-01A-11R-A18M-07 HN1-GGA3 8 27 chr17:75146666:- chr17:75246796:- INFRAME NA TCGA-HN-A2NL-01A-11R-A18M-07 DDX11-ITGA10 2 4 chr12:31078537:+ chr1:145907465:- FRAMESHIFT NA TCGA-JL-A3YX-01A-11R-A22U-07 MYO5A-OIP5 6 11 chr15:52397201:- chr15:41319780:- INFRAME NA TCGA-LD-A74U-01A-13R-A33J-07 HMGN1-RORA 3 43 chr21:39348292:- chr15:61176456:- FRAMESHIFT NA TCGA-LD-A7W5-01A-22R-A352-07 C10orf11-RUFY2 26 115 chr10:75438494:+ chr10:68364113:- INFRAME NA TCGA-LD-A7W5-01A-22R-A352-07 GID4-FDXR 13 53 chr17:18039902:+ chr17:74866876:- INFRAME NA TCGA-LD-A7W5-01A-22R-A352-07 TECTB-ATRNL1 8 3 chr10:112286391:+ chr10:115727248:+ INFRAME NA TCGA-LD-A7W5-01A-22R-A352-07 PDCD7-TAF15 3 16 chr15:65129032:- chr17:35817716:+ INFRAME NA TCGA-LD-A7W5-01A-22R-A352-07 TRIO-FAM53B 1 18 chr5:14336727:+ chr10:124623604:- INFRAME NA TCGA-LD-A7W5-01A-22R-A352-07 CTBP1-POLN 3 5 chr4:1238183:- chr4:2095933:- FRAMESHIFT NA TCGA-LD-A7W5-01A-22R-A352-07 SMG1-MON2 1 3 chr16:18868523:- chr12:62585294:+ FRAMESHIFT NA TCGA-LD-A7W6-01A-81R-A352-07 PCBP2-TMED2 6 46 chr12:53468832:+ chr12:123597928:+ . NA TCGA-LD-A7W6-01A-81R-A352-07 NR2C2AP-MAP1S 4 45 chr19:19201931:- chr19:17725049:+ INFRAME NA TCGA-LD-A7W6-01A-81R-A352-07 EMSY-LRP5 7 20 chr11:76464080:+ chr11:68386316:+ FRAMESHIFT NA TCGA-LD-A7W6-01A-81R-A352-07 RAB6A-SHANK2 1 2 chr11:73716251:- chr11:70698763:- INFRAME NA TCGA-LD-A9QF-01A-32R-A41B-07 SNHG12-YIPF1 41 154 chr1:28581590:- chr1:53860153:- . NA TCGA-LD-A9QF-01A-32R-A41B-07 MED1-ANKFN1 27 85 chr17:39447798:- chr17:56184749:+ . NA TCGA-LD-A9QF-01A-32R-A41B-07 MSI2-TOB1 1 21 chr17:57627303:+ chr17:50864163:- . NA TCGA-LD-A9QF-01A-32R-A41B-07 SPOP-RARA 3 6 chr17:49677933:- chr17:40330857:+ . Likely Oncogenic NA TCGA-LD-A9QF-01A-32R-A41B-07 STARD3-IKZF3 2 9 chr17:39661085:+ chr17:39792933:- FRAMESHIFT NA TCGA-LD-A9QF-01A-32R-A41B-07 DEK-NUP210L 1 5 chr6:18249651:- chr1:154027597:- INFRAME NA TCGA-LD-A9QF-01A-32R-A41B-07 CDK12-ANKRD13B 1 3 chr17:39471763:+ chr17:29607742:+ FRAMESHIFT Likely Oncogenic NA TCGA-LL-A440-01A-11R-A24H-07 CHKA-PC 3 42 chr11:68097019:- chr11:66872159:- INFRAME NA TCGA-LL-A440-01A-11R-A24H-07 CDCA2-ADAM28 1 9 chr8:25503544:+ chr8:24308641:+ FRAMESHIFT NA TCGA-LL-A5YM-01A-11R-A28M-07 H3F3B-TRIM47 164 209 chr17:75778106:- chr17:75878504:- . NA TCGA-LL-A5YM-01A-11R-A28M-07 COL1A1-CPB1 3 4 chr17:50184532:- chr3:148859887:+ . NA TCGA-LL-A5YN-01A-11R-A28M-07 MED1-ODF3L2 12 88 chr17:39447798:- chr19:464364:- FRAMESHIFT NA TCGA-LL-A5YN-01A-11R-A28M-07 HERC1-PCLAF 2 28 chr15:63677845:- chr15:64366075:- INFRAME NA TCGA-LL-A5YN-01A-11R-A28M-07 CDKAL1-MTUS2-AS2 5 12 chr6:20548705:+ chr13:29239958:- . NA TCGA-LL-A5YN-01A-11R-A28M-07 RABEP1-CDRT8 4 6 chr17:5308822:+ chr17:15105543:- . NA TCGA-LL-A5YO-01A-21R-A28M-07 TRPV6-KEL 12 66 chr7:142885389:- chr7:142943883:- FRAMESHIFT NA TCGA-LL-A5YO-01A-21R-A28M-07 BSPRY-NPM1 1 32 chr9:113360737:+ chr5:171410527:+ INFRAME Likely Oncogenic NA TCGA-LL-A5YP-01A-21R-A28M-07 NCBP3-CAMKK1 4 25 chr17:3843086:- chr17:3880434:- FRAMESHIFT NA TCGA-LL-A5YP-01A-21R-A28M-07 SUPT6H-UTP6 2 7 chr17:28662342:+ chr17:31875413:- . NA TCGA-LL-A5YP-01A-21R-A28M-07 RSF1-FBXW4 1 7 chr11:77820528:- chr10:101676436:- FRAMESHIFT NA TCGA-LL-A6FP-01A-11R-A31O-07 PIGK-ST6GALNAC3 1 5 chr1:77154449:- chr1:76412008:+ FRAMESHIFT NA TCGA-LL-A6FQ-01A-11R-A31O-07 PLCB3-PGA5 37 49 chr11:64255616:+ chr11:61245946:+ INFRAME NA TCGA-LL-A6FQ-01A-11R-A31O-07 NEU3-POLA2 10 16 chr11:74994720:+ chr11:65275892:+ INFRAME NA TCGA-LL-A6FQ-01A-11R-A31O-07 LRP5-MADD 3 19 chr11:68441381:+ chr11:47323671:+ . NA TCGA-LL-A6FQ-01A-11R-A31O-07 C11orf49-PPME1 2 12 chr11:46936851:+ chr11:74230245:+ FRAMESHIFT NA TCGA-LL-A6FQ-01A-11R-A31O-07 CELF1-LUZP2 2 8 chr11:47499453:- chr11:25050038:+ FRAMESHIFT NA TCGA-LL-A6FR-01A-12R-A31O-07 ACLY-DNAJC7 147 483 chr17:41901696:- chr17:41977323:- INFRAME NA TCGA-LL-A6FR-01A-12R-A31O-07 RPL38-KIF19 3 3 chr17:74204190:+ chr17:74328425:+ FRAMESHIFT NA TCGA-LL-A6FR-01A-12R-A31O-07 PATZ1-PKIB 1 5 chr22:31342897:- chr6:122585921:+ . NA TCGA-LL-A6FR-01A-12R-A31O-07 MYH9-C22orf31 1 3 chr22:36387807:- chr22:29060843:- . NA TCGA-LL-A73Y-01A-11R-A33J-07 FUBP1-LRRC7 4 10 chr1:77966694:- chr1:69678381:+ INFRAME Likely Oncogenic NA TCGA-LL-A73Y-01A-11R-A33J-07 TDRD3-LHFP 2 7 chr13:60397405:+ chr13:39378526:- FRAMESHIFT NA TCGA-LL-A73Z-01A-11R-A32P-07 SHTN1-FAM24B 3 18 chr10:117005022:- chr10:122855786:- . NA TCGA-LL-A740-01A-21R-A32P-07 HIVEP1-DST 5 21 chr6:12135892:+ chr6:56460254:- FRAMESHIFT NA TCGA-LL-A740-01A-21R-A32P-07 NUP153-NEDD9 6 8 chr6:17688396:- chr6:11306155:- . NA TCGA-LL-A740-01A-21R-A32P-07 E2F3-FBXO9 1 26 chr6:20403832:+ chr6:53071057:+ INFRAME NA TCGA-LL-A740-01A-21R-A32P-07 SBNO1-CLSPN 2 18 chr12:123309710:- chr1:35720980:- FRAMESHIFT NA TCGA-LL-A7SZ-01A-32R-A352-07 MICA-TMEM232 11 72 chr6:31400763:+ chr5:110289440:- . NA TCGA-LL-A7SZ-01A-32R-A352-07 HCP5-TMEM232 11 32 chr6:31400763:+ chr5:110289440:- . NA TCGA-LL-A7SZ-01A-32R-A352-07 BIRC6-RMDN2 5 38 chr2:32597968:+ chr2:38066982:+ INFRAME NA TCGA-LL-A7SZ-01A-32R-A352-07 DHX57-DNAJC5B 5 7 chr2:38875787:- chr8:66043488:+ . NA TCGA-LL-A7SZ-01A-32R-A352-07 VAPB-CDH12 2 8 chr20:58434705:+ chr5:21802420:- INFRAME NA TCGA-LL-A7SZ-01A-32R-A352-07 BIRC6-ABCC11 2 7 chr2:32513154:+ chr16:48177113:- FRAMESHIFT NA TCGA-LL-A7SZ-01A-32R-A352-07 ZZEF1-SMG6 2 3 chr17:4088678:- chr17:2085901:- INFRAME NA TCGA-LL-A7T0-01A-31R-A352-07 ASH2L-ZFYVE28 5 46 chr8:38119363:+ chr4:2341615:- FRAMESHIFT NA TCGA-LL-A7T0-01A-31R-A352-07 PDLIM5-SHISA5 4 13 chr4:94618191:+ chr3:48501293:- INFRAME NA TCGA-LL-A7T0-01A-31R-A352-07 PDLIM5-ART3 2 8 chr4:94455384:+ chr4:76075881:+ . NA TCGA-LL-A7T0-01A-31R-A352-07 LMAN2L-MRPS5 2 5 chr2:96733519:- chr2:95108408:- FRAMESHIFT NA TCGA-LL-A7T0-01A-31R-A352-07 MAP4K4-LYG2 1 5 chr2:101844311:+ chr2:99245458:- FRAMESHIFT NA TCGA-LL-A8F5-01A-11R-A36F-07 SETD5-LMCD1 4 17 chr3:9442245:+ chr3:8532737:+ INFRAME NA TCGA-LL-A8F5-01A-11R-A36F-07 ARSJ-DNAH9 3 11 chr4:113903253:- chr17:11925429:+ . NA TCGA-LL-A8F5-01A-11R-A36F-07 GSE1-NONO 1 6 chr16:85613398:+ chrX:71290629:+ . NA TCGA-LL-A9Q3-01A-11R-A41B-07 UBE2F-RAMP1 35 116 chr2:238016633:+ chr2:237911528:+ FRAMESHIFT NA TCGA-LL-A9Q3-01A-11R-A41B-07 TBC1D13-ODF2 10 39 chr9:128797214:+ chr9:128482816:+ INFRAME NA TCGA-LL-A9Q3-01A-11R-A41B-07 B4GALT1-AQP7 1 3 chr9:33166758:- chr9:33386541:- INFRAME NA TCGA-OK-A5Q2-01A-11R-A27Q-07 DHDDS-PSMB2 4 18 chr1:26433008:+ chr1:35636432:- FRAMESHIFT NA TCGA-OK-A5Q2-01A-11R-A27Q-07 DENND1B-RRP15 1 13 chr1:197772868:- chr1:218302294:+ INFRAME NA TCGA-OK-A5Q2-01A-11R-A27Q-07 NEK7-INTS7 1 11 chr1:198264235:+ chr1:211942111:- INFRAME NA TCGA-OL-A5D6-01A-21R-A27Q-07 SNAI1-SLC9A8 16 167 chr20:49983141:+ chr20:49862929:+ FRAMESHIFT NA TCGA-OL-A5D6-01A-21R-A27Q-07 RTF1-SNX24 1 1 chr15:41417313:+ chr5:122936734:+ INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 MAN1A2-CD101 42 117 chr1:117466427:+ chr1:117033860:+ INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 CHAF1A-CCDC94 33 145 chr19:4428890:+ chr19:4261994:+ INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 PIP5K1C-PALM 18 56 chr19:3660966:- chr19:746285:+ FRAMESHIFT NA TCGA-OL-A5D7-01A-11R-A27Q-07 MTMR1-HS1BP3 14 61 chrX:150755865:+ chr2:20641180:- INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 ZNF664-AKR1C2 12 67 chr12:124012475:+ chr10:5006592:- . NA TCGA-OL-A5D7-01A-11R-A27Q-07 FRYL-DTD1 5 88 chr4:48619274:- chr20:18744100:+ INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 PHRF1-GCGR 13 46 chr11:609411:+ chr17:81808823:+ . NA TCGA-OL-A5D7-01A-11R-A27Q-07 STK11-KDM4B 4 35 chr19:1207203:+ chr19:5032866:+ . Likely Oncogenic NA TCGA-OL-A5D7-01A-11R-A27Q-07 FIP1L1-SBNO2 5 18 chr4:53425965:+ chr19:1113704:- FRAMESHIFT NA TCGA-OL-A5D7-01A-11R-A27Q-07 GLYCTK-ALAS1 3 16 chr3:52291111:+ chr3:52211283:+ INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 C8orf44-ADHFE1 2 17 chr8:66667701:+ chr8:66471430:+ . NA TCGA-OL-A5D7-01A-11R-A27Q-07 TRIM2-CHD4 2 13 chr4:153152612:+ chr12:6578917:- . NA TCGA-OL-A5D7-01A-11R-A27Q-07 GON4L-ARHGEF2 3 8 chr1:155820606:- chr1:155996627:- . NA TCGA-OL-A5D7-01A-11R-A27Q-07 PIK3R3-LRRC41 2 12 chr1:46061929:- chr1:46281385:- FRAMESHIFT Likely Oncogenic NA TCGA-OL-A5D7-01A-11R-A27Q-07 POC1A-TLR9 3 7 chr3:52122379:- chr3:52225635:- . NA TCGA-OL-A5D7-01A-11R-A27Q-07 SUCO-ZCWPW2 2 8 chr1:172591071:+ chr3:28435110:+ FRAMESHIFT NA TCGA-OL-A5D7-01A-11R-A27Q-07 MUS81-C11orf80 1 6 chr11:65865894:+ chr11:66842849:+ INFRAME NA TCGA-OL-A5D7-01A-11R-A27Q-07 C11orf80-EFEMP2 1 1 chr11:66828364:+ chr11:65870237:- FRAMESHIFT NA TCGA-OL-A5D8-01A-11R-A27Q-07 MAL2-NOV 18 65 chr8:119221757:+ chr8:119416386:+ . NA TCGA-OL-A5D8-01A-11R-A27Q-07 SETDB1-CD46 12 34 chr1:150951481:+ chr1:207757014:+ FRAMESHIFT NA TCGA-OL-A5D8-01A-11R-A27Q-07 PCNX2-SPRR1B 1 72 chr1:233295326:- chr1:153032327:+ . NA TCGA-OL-A5D8-01A-11R-A27Q-07 ARID4B-MRPS10P1 9 25 chr1:235326914:- chr1:169990084:+ . NA TCGA-OL-A5D8-01A-11R-A27Q-07 RRNAD1-ARNT 4 35 chr1:156729215:+ chr1:150818030:- INFRAME NA TCGA-OL-A5D8-01A-11R-A27Q-07 NBPF10-NME7 10 5 chr1:146117547:- chr1:169132817:- FRAMESHIFT NA TCGA-OL-A5D8-01A-11R-A27Q-07 TBCE-AIM2 2 15 chr1:235380149:+ chr1:159132356:- . NA TCGA-OL-A5D8-01A-11R-A27Q-07 DYNC1I2-BRE 3 9 chr2:171715443:+ chr2:28237202:+ FRAMESHIFT NA TCGA-OL-A5D8-01A-11R-A27Q-07 EIF2AK2-STRN 2 12 chr2:37114731:- chr2:36925208:- INFRAME NA TCGA-OL-A5D8-01A-11R-A27Q-07 CPD-TBX2 1 10 chr17:30420983:+ chr17:61408054:+ INFRAME NA TCGA-OL-A5DA-01A-11R-A27Q-07 NDUFA8-DNAJC25 5 30 chr9:122159627:- chr9:111642857:+ INFRAME NA TCGA-OL-A5DA-01A-11R-A27Q-07 ZBTB24-CMAHP 3 28 chr6:109475399:- chr6:25081879:- . NA TCGA-OL-A5DA-01A-11R-A27Q-07 GRIK2-CDKAL1 2 7 chr6:101399392:+ chr6:21065048:+ FRAMESHIFT NA TCGA-OL-A5DA-01A-11R-A27Q-07 PREP-ARMC2 1 8 chr6:105282451:- chr6:108894467:+ FRAMESHIFT NA TCGA-OL-A5DA-01A-11R-A27Q-07 CCDC180-NDUFA8 1 6 chr9:97313345:+ chr9:122152408:- INFRAME NA TCGA-OL-A5RV-01A-12R-A28M-07 ZNF773-PPP2R1A 4 12 chr19:57500113:+ chr19:52201944:+ INFRAME NA TCGA-OL-A5RW-01A-11R-A28M-07 NCOA1-GOLGB1 30 83 chr2:24673463:+ chr3:121669355:- INFRAME NA TCGA-OL-A5RW-01A-11R-A28M-07 ARMC9-TM4SF4 8 39 chr2:231296253:+ chr3:149498820:+ FRAMESHIFT NA TCGA-OL-A5RW-01A-11R-A28M-07 MED13L-GTF2IRD1 1 21 chr12:116111428:- chr7:74508075:+ . NA TCGA-OL-A5RW-01A-11R-A28M-07 FAM98B-RASGRP1 1 11 chr15:38481459:+ chr15:38505920:- INFRAME NA TCGA-OL-A5RW-01A-11R-A28M-07 FBXL18-RNF216 2 4 chr7:5491231:- chr7:5641376:- INFRAME NA TCGA-OL-A5RW-01A-11R-A28M-07 GALK2-MAPK6 2 2 chr15:49170375:+ chr15:52058633:+ FRAMESHIFT NA TCGA-OL-A5RW-01A-11R-A28M-07 ASL-GUSB 2 1 chr7:66076093:+ chr7:65967907:- INFRAME NA TCGA-OL-A5RW-01A-11R-A28M-07 TRAF3-KLC1 1 3 chr14:102830472:+ chr14:103654564:+ . NA TCGA-OL-A5RW-01A-11R-A28M-07 VPS53-RTN4RL1 1 3 chr17:697418:- chr17:1937808:- FRAMESHIFT NA TCGA-OL-A5RY-01A-21R-A28M-07 ERBB2-ZAN 3 56 chr17:39710481:+ chr7:100795196:+ INFRAME NA TCGA-OL-A5RY-01A-21R-A28M-07 ACO1-TYRP1 8 12 chr9:32384735:+ chr9:12693912:+ . NA TCGA-OL-A5RY-01A-21R-A28M-07 TEKT4P2-IKZF3 3 18 chr21:9127489:- chr17:39757965:- . NA TCGA-OL-A5RY-01A-21R-A28M-07 FLRT3-SEL1L2 1 9 chr20:14337404:- chr20:13956131:- . NA TCGA-OL-A5RZ-01A-11R-A28M-07 RAB22A-NEUROD2 82 304 chr20:58311122:+ chr17:39608065:- . NA TCGA-OL-A5RZ-01A-11R-A28M-07 SCMH1-GPBP1L1 22 54 chr1:41242059:- chr1:45634236:- . NA TCGA-OL-A5RZ-01A-11R-A28M-07 PRDX1-TMEM53 9 55 chr1:45518938:- chr1:44645464:- INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 HYI-NFIA 16 17 chr1:43451648:- chr1:61332512:+ INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 SPAG5-SLC47A1 6 49 chr17:28585864:- chr17:19542393:+ INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 PPM1E-SPAG5 6 39 chr17:58965893:+ chr17:28586182:- INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 TOM1L1-TMEM11 6 27 chr17:54950126:+ chr17:21198840:- INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 HIVEP3-GPBP1L1 6 14 chr1:41864578:- chr1:45634236:- . NA TCGA-OL-A5RZ-01A-11R-A28M-07 CCDC144A-PPM1E 3 22 chr17:16735643:+ chr17:58955649:+ FRAMESHIFT NA TCGA-OL-A5RZ-01A-11R-A28M-07 PTPRF-HIVEP3 5 9 chr1:43538277:+ chr1:41700995:- . NA TCGA-OL-A5RZ-01A-11R-A28M-07 MED1-LMNTD1 1 24 chr17:39443550:- chr12:25526955:- FRAMESHIFT NA TCGA-OL-A5RZ-01A-11R-A28M-07 ETNK1-RCAN2 1 20 chr12:22625586:+ chr6:46248896:- INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 MACF1-PATJ 1 15 chr1:39105717:+ chr1:62148284:+ FRAMESHIFT NA TCGA-OL-A5RZ-01A-11R-A28M-07 HELZ-TTYH2 1 9 chr17:67178659:- chr17:74252234:+ INFRAME NA TCGA-OL-A5RZ-01A-11R-A28M-07 C2CD5-LGALS9B 1 6 chr12:22523426:- chr17:20453607:- FRAMESHIFT NA TCGA-OL-A5RZ-01A-11R-A28M-07 PATJ-SRR 1 6 chr1:61990364:+ chr17:2315557:+ . NA TCGA-OL-A5RZ-01A-11R-A28M-07 ITFG2-ZNF831 1 5 chr12:2824013:+ chr20:59146231:+ . NA TCGA-OL-A5RZ-01A-11R-A28M-07 STARD3-CACNA1C 1 4 chr17:39637231:+ chr12:2448976:+ . NA TCGA-OL-A5RZ-01A-11R-A28M-07 FBXL20-SOX5 1000 1000 chr17:39258305:- chr12:23546424:- . NA TCGA-OL-A5S0-01A-11R-A28M-07 TBC1D4-COMMD6 9 65 chr13:75481270:- chr13:75530266:- INFRAME NA TCGA-OL-A5S0-01A-11R-A28M-07 MNAT1-PCNX4 2 5 chr14:60798160:+ chr14:60133970:+ FRAMESHIFT NA TCGA-OL-A66I-01A-21R-A29R-07 UBE2J2-ACAP3 30 191 chr1:1267862:- chr1:1294199:- FRAMESHIFT NA TCGA-OL-A66I-01A-21R-A29R-07 ASCC1-MICU1 14 36 chr10:72196811:- chr10:72423371:- INFRAME NA TCGA-OL-A66I-01A-21R-A29R-07 MED25-MAPK15 7 22 chr19:49832415:+ chr8:143717694:+ INFRAME NA TCGA-OL-A66I-01A-21R-A29R-07 PAH-NINJ2 2 28 chr12:102912791:- chr12:566178:- INFRAME NA TCGA-OL-A66I-01A-21R-A29R-07 GOLGA4-CTDSPL 4 18 chr3:37273601:+ chr3:37964571:+ INFRAME NA TCGA-OL-A66I-01A-21R-A29R-07 DOT1L-EPB41L2 4 17 chr19:2180756:+ chr6:130956499:- . NA TCGA-OL-A66I-01A-21R-A29R-07 STK11-SMARCD2 2 11 chr19:1207203:+ chr17:63837625:- FRAMESHIFT Likely Oncogenic NA TCGA-OL-A66I-01A-21R-A29R-07 LRPPRC-CYTIP 3 6 chr2:43934190:- chr2:157444006:- FRAMESHIFT NA TCGA-OL-A66I-01A-21R-A29R-07 TMEM259-CCDC25 1 14 chr19:1020772:- chr8:27752587:- INFRAME NA TCGA-OL-A66I-01A-21R-A29R-07 TOX-PGBD2 2 6 chr8:58939302:- chr1:248913816:+ . NA TCGA-OL-A66I-01A-21R-A29R-07 FBXO32-ANXA13 2 5 chr8:123531898:- chr8:123681359:- INFRAME NA TCGA-OL-A66I-01A-21R-A29R-07 CREBBP-ZNF500 2 4 chr16:3879832:- chr16:4753058:- INFRAME Likely Oncogenic NA TCGA-OL-A66I-01A-21R-A29R-07 NUCKS1-PM20D1 1 6 chr1:205749957:- chr1:205847971:- FRAMESHIFT NA TCGA-OL-A66I-01A-21R-A29R-07 USP7-TMEM186 1 4 chr16:8905187:- chr16:8781444:- . NA TCGA-OL-A66I-01A-21R-A29R-07 ABAT-USP7 1000 1000 chr16:8784280:+ chr16:8915526:- . NA TCGA-OL-A66J-01A-11R-A29R-07 NSD3-PLEKHA2 4 6 chr8:38288487:- chr8:38969421:+ INFRAME NA TCGA-OL-A66J-01A-11R-A29R-07 CLPB-TMEM134 2 5 chr11:72430312:- chr11:67468092:- INFRAME NA TCGA-OL-A66O-01A-11R-A31O-07 TOM1L2-PEMT 3 13 chr17:17893661:- chr17:17577027:- INFRAME NA TCGA-OL-A66P-01A-11R-A31O-07 ATF7-ATP5G2 35 183 chr12:53600953:- chr12:53669948:- INFRAME NA TCGA-OL-A66P-01A-11R-A31O-07 TMEM135-CHEK1 14 86 chr11:87091395:+ chr11:125675928:+ . NA TCGA-OL-A66P-01A-11R-A31O-07 CCM2-SUGCT 5 22 chr7:45000363:+ chr7:40860316:+ FRAMESHIFT NA TCGA-OL-A66P-01A-11R-A31O-07 KHDC1-OOEP 2 13 chr6:73262934:- chr6:73369385:- . NA TCGA-OL-A66P-01A-11R-A31O-07 TRAF2-CCDC183 4 3 chr9:136909994:+ chr9:136799102:+ FRAMESHIFT NA TCGA-OL-A66P-01A-11R-A31O-07 CXCL16-TEKT1 2 5 chr17:4738408:- chr17:6819358:- INFRAME NA TCGA-OL-A66P-01A-11R-A31O-07 NAA40-RTN3 2 4 chr11:63947003:+ chr11:63749991:+ FRAMESHIFT NA TCGA-OL-A66P-01A-11R-A31O-07 ZFP30-PRX 1 8 chr19:37654712:- chr19:40408383:- . NA TCGA-OL-A66P-01A-11R-A31O-07 GOLGB1-IQCB1 1 5 chr3:121681687:- chr3:121790215:- INFRAME NA TCGA-OL-A66P-01A-11R-A31O-07 EEF2K-VWA3A 1 4 chr16:22244730:+ chr16:22138360:+ FRAMESHIFT NA TCGA-OL-A6VO-01A-12R-A33J-07 MBOAT1-FYN 17 56 chr6:20212136:- chr6:111661947:- FRAMESHIFT NA TCGA-OL-A6VO-01A-12R-A33J-07 CD2AP-BLOC1S5 8 47 chr6:47554766:+ chr6:8015828:- FRAMESHIFT NA TCGA-OL-A6VO-01A-12R-A33J-07 CAMK1D-MINDY3 6 28 chr10:12666810:+ chr10:15782226:- FRAMESHIFT NA TCGA-OL-A6VO-01A-12R-A33J-07 OSGIN2-RIPK2 2 9 chr8:89914746:+ chr8:89762829:+ FRAMESHIFT NA TCGA-OL-A6VO-01A-12R-A33J-07 SMIM13-ENPP3 2 7 chr6:11094389:+ chr6:131637235:+ . NA TCGA-OL-A6VO-01A-12R-A33J-07 ENPP1-RIPPLY2 1 4 chr6:131808275:+ chr6:83854097:+ INFRAME NA TCGA-OL-A97C-01A-32R-A41B-07 BCAP31-SYNJ2BP 1 4 chrX:153703959:- chr14:70375771:- INFRAME NA TCGA-PE-A5DC-01A-12R-A27Q-07 CTTN-INPPL1 21 107 chr11:70433801:+ chr11:72232731:+ . NA TCGA-PE-A5DC-01A-12R-A27Q-07 PAPOLA-GALNT5 7 13 chr14:96502600:+ chr2:157284282:+ INFRAME NA TCGA-PE-A5DC-01A-12R-A27Q-07 AGAP1-MATN2 1 25 chr2:235968623:+ chr8:97941777:+ INFRAME NA TCGA-PE-A5DC-01A-12R-A27Q-07 PLEKHB1-PACS1 4 7 chr11:73651890:+ chr11:66193486:+ INFRAME NA TCGA-PE-A5DC-01A-12R-A27Q-07 LRP5-ALKBH5 3 6 chr11:68312805:+ chr17:18194955:+ FRAMESHIFT NA TCGA-PE-A5DC-01A-12R-A27Q-07 MYO15A-TOP3A 3 4 chr17:18173921:+ chr17:18274980:- FRAMESHIFT NA TCGA-PE-A5DC-01A-12R-A27Q-07 ZNF286B-ALKBH5 1 6 chr17:18680741:- chr17:18194955:+ FRAMESHIFT NA TCGA-PE-A5DC-01A-12R-A27Q-07 EPB41L1-CEP250 1 5 chr20:36198041:+ chr20:35458304:+ . NA TCGA-PE-A5DD-01A-12R-A27Q-07 CHD8-IMPG1 6 8 chr14:21426128:- chr6:76034787:- FRAMESHIFT NA TCGA-PE-A5DD-01A-12R-A27Q-07 SIN3A-NEO1 1 11 chr15:75451423:- chr15:73236347:+ . NA TCGA-PE-A5DE-01A-11R-A27Q-07 SNAP29-IGLL1 28 221 chr22:20870533:+ chr22:23575082:- INFRAME NA TCGA-PL-A8LX-01A-11R-A41B-07 ITPA-SLC22A24 1 7 chr20:3214058:+ chr11:63079997:- INFRAME NA TCGA-PL-A8LX-01A-11R-A41B-07 NDUFAF5-MACROD2 1 2 chr20:13808902:+ chr20:15862745:+ FRAMESHIFT NA TCGA-PL-A8LZ-01A-31R-A36F-07 USP10-KIFC3 16 59 chr16:84733503:+ chr16:57766985:- INFRAME NA TCGA-PL-A8LZ-01A-31R-A36F-07 NDC1-YIPF1 6 49 chr1:53825798:- chr1:53860153:- INFRAME NA TCGA-PL-A8LZ-01A-31R-A36F-07 GK5-CENPL 1 15 chr3:142215599:- chr1:173811306:- . NA TCGA-PL-A8LZ-01A-31R-A36F-07 PIK3C2A-PLEKHA7 3 5 chr11:17105169:- chr11:16871182:- FRAMESHIFT NA TCGA-S3-A6ZF-01A-32R-A32P-07 GLA-HNRNPH2 59 207 chrX:101407710:- chrX:101411936:+ . NA TCGA-S3-A6ZF-01A-32R-A32P-07 RNF44-NXF3 14 45 chr5:176537731:- chrX:103084495:- . NA TCGA-S3-A6ZF-01A-32R-A32P-07 CD99L2-CXorf66 14 36 chrX:150898522:- chrX:139958217:- INFRAME NA TCGA-S3-A6ZF-01A-32R-A32P-07 TRPC4AP-TOX2 2 32 chr20:35010187:- chr20:44065712:+ FRAMESHIFT NA TCGA-S3-A6ZF-01A-32R-A32P-07 BLNK-PIK3AP1 6 13 chr10:96216653:- chr10:96628493:- INFRAME NA TCGA-S3-A6ZF-01A-32R-A32P-07 CCDC149-GABRB1 2 8 chr4:24912817:- chr4:47031914:+ FRAMESHIFT NA TCGA-S3-A6ZF-01A-32R-A32P-07 CYB5R4-CNTN6 1 11 chr6:83864328:+ chr3:1147927:+ . NA TCGA-S3-A6ZG-01A-22R-A32P-07 HHAT-RFWD2 18 36 chr1:210623670:+ chr1:175947239:- FRAMESHIFT NA TCGA-S3-A6ZG-01A-22R-A32P-07 ARRB1-PICALM 3 25 chr11:75351588:- chr11:86014963:- INFRAME NA TCGA-S3-A6ZG-01A-22R-A32P-07 PSMD4-COPA 2 8 chr1:151254808:+ chr1:160309176:- FRAMESHIFT NA TCGA-S3-A6ZG-01A-22R-A32P-07 DAP3-OBSCN 1 4 chr1:155689174:+ chr1:228332860:+ . NA TCGA-S3-A6ZH-01A-22R-A32P-07 RAB11FIP1-UNC5D 12 191 chr8:37877109:- chr8:35790359:+ FRAMESHIFT NA TCGA-S3-A6ZH-01A-22R-A32P-07 PC-PPP6R3 21 142 chr11:66952430:- chr11:68603342:+ . NA TCGA-S3-A6ZH-01A-22R-A32P-07 PC-ANO1 7 23 chr11:66958322:- chr11:70105734:+ . NA TCGA-S3-A6ZH-01A-22R-A32P-07 HOOK3-FADS2P1 3 7 chr8:42906258:+ chr11:56900039:+ . NA TCGA-S3-A6ZH-01A-22R-A32P-07 NFAT5-NQO1 1 1 chr16:69568548:+ chr16:69718534:- INFRAME NA TCGA-S3-AA0Z-01A-11R-A41B-07 NOMO3-TFAP4 45 218 chr16:16256158:+ chr16:4262701:- INFRAME NA TCGA-S3-AA0Z-01A-11R-A41B-07 HOOK2-NFIX 19 102 chr19:12774669:- chr19:13025021:+ INFRAME NA TCGA-S3-AA0Z-01A-11R-A41B-07 EMP2-BFAR 14 32 chr16:10537928:- chr16:14661892:+ FRAMESHIFT NA TCGA-S3-AA0Z-01A-11R-A41B-07 BCL7C-OTOA 8 30 chr16:30888860:- chr16:21691584:+ FRAMESHIFT NA TCGA-S3-AA0Z-01A-11R-A41B-07 GPRC5B-C16orf96 5 21 chr16:19861837:- chr16:4571561:+ INFRAME NA TCGA-S3-AA0Z-01A-11R-A41B-07 PRR14-GSG1L 1 8 chr16:30655593:+ chr16:27963203:- FRAMESHIFT NA TCGA-S3-AA0Z-01A-11R-A41B-07 CLEC16A-GRIN2A 2 3 chr16:11061022:+ chr16:9938551:- FRAMESHIFT NA TCGA-S3-AA10-01A-21R-A41B-07 AEBP2-TACC1P1 2 5 chr12:19440727:+ chr10:37523011:+ . NA TCGA-S3-AA10-01A-21R-A41B-07 FOXK1-ZNF671 2 5 chr7:4682868:+ chr19:57723340:- FRAMESHIFT NA TCGA-S3-AA10-01A-21R-A41B-07 DHX8-TDRD3 2 3 chr17:43522226:+ chr13:60494435:+ FRAMESHIFT NA TCGA-S3-AA10-01A-21R-A41B-07 ZNF124-AHCTF1 1 3 chr1:247159006:- chr1:246918377:- INFRAME NA TCGA-S3-AA11-01A-31R-A41B-07 SEC31B-GRID1 1 11 chr10:100505361:- chr10:85647397:- FRAMESHIFT NA TCGA-S3-AA12-01A-11R-A41B-07 CABLES1-FTO 94 203 chr18:23136607:+ chr16:54111762:+ INFRAME NA TCGA-S3-AA12-01A-11R-A41B-07 GTF2E2-EIF4EBP1 29 66 chr8:30653433:- chr8:38057081:+ INFRAME NA TCGA-S3-AA12-01A-11R-A41B-07 SLC20A2-ZMAT4 3 5 chr8:42541538:- chr8:40767730:- . NA TCGA-S3-AA12-01A-11R-A41B-07 GTF2E2-FUT10 1 8 chr8:30653433:- chr8:33394255:- . NA TCGA-S3-AA14-01A-11R-A41B-07 NPEPPS-OMG 1 42 chr17:47569494:+ chr17:31272765:- . NA TCGA-S3-AA15-01A-11R-A41B-07 TRMT11-TPD52L1 4 23 chr6:125986622:+ chr6:125220078:+ FRAMESHIFT NA TCGA-S3-AA17-01A-11R-A41B-07 LDLRAD3-KLKP1 3 8 chr11:36098461:+ chr19:50887874:- . NA TCGA-S3-AA17-01A-11R-A41B-07 TCP11L1-SYT9 3 5 chr11:33072653:+ chr11:7303039:+ INFRAME NA TCGA-S3-AA17-01A-11R-A41B-07 DNAJB12-CTNNA3 1 6 chr10:72354765:- chr10:67219870:- FRAMESHIFT NA TCGA-UL-AAZ6-01A-11R-A41B-07 ZNF701-PSMA7 50 9 chr19:52570330:+ chr20:62140944:- . NA TCGA-UL-AAZ6-01A-11R-A41B-07 CACNB1-TANC2 16 31 chr17:39191474:- chr17:63073943:+ FRAMESHIFT NA TCGA-UL-AAZ6-01A-11R-A41B-07 SNHG14-STARD3 13 24 chr15:25252333:+ chr17:39660211:+ . NA TCGA-UL-AAZ6-01A-11R-A41B-07 PSMD8-MAP3K10 6 12 chr19:38376454:+ chr19:40204485:+ INFRAME NA TCGA-UL-AAZ6-01A-11R-A41B-07 PRKCZ-GABRD 6 11 chr1:2059591:+ chr1:2024942:+ FRAMESHIFT NA TCGA-UL-AAZ6-01A-11R-A41B-07 CYFIP1-ACACA 6 7 chr15:22937104:- chr17:37277114:- INFRAME NA TCGA-UL-AAZ6-01A-11R-A41B-07 APPBP2-ZNF345 3 12 chr17:60479148:- chr19:36892818:+ FRAMESHIFT NA TCGA-UL-AAZ6-01A-11R-A41B-07 KMT5B-SUPT5H 4 8 chr11:68213477:- chr19:39464798:+ . NA TCGA-UL-AAZ6-01A-11R-A41B-07 LENG8-SIPA1L3 4 7 chr19:54458521:+ chr19:38141184:+ INFRAME NA TCGA-UL-AAZ6-01A-11R-A41B-07 DUSP14-HEATR6 3 9 chr17:37489952:+ chr17:60044135:- . NA TCGA-UL-AAZ6-01A-11R-A41B-07 BCAS3-EYA2 1 16 chr17:61040892:+ chr20:47016181:+ INFRAME NA TCGA-UL-AAZ6-01A-11R-A41B-07 MAP3K10-PCMTD2 2 10 chr19:40198555:+ chr20:64273221:+ INFRAME NA TCGA-UL-AAZ6-01A-11R-A41B-07 MED8-SCMH1 1 10 chr1:43385046:- chr1:41028726:- FRAMESHIFT NA TCGA-UL-AAZ6-01A-11R-A41B-07 INTS2-ACACA 2 4 chr17:61919400:- chr17:37369487:- . NA TCGA-UL-AAZ6-01A-11R-A41B-07 FBXL20-SNHG14 1 3 chr17:39402173:- chr15:25222159:+ . NA TCGA-UL-AAZ6-01A-11R-A41B-07 TESMIN-COX18 1 3 chr11:68738700:- chr4:73065413:- INFRAME NA TCGA-UL-AAZ6-01A-11R-A41B-07 FAM214A-CTPS1 1 2 chr15:52678006:- chr1:40983278:+ . NA TCGA-UL-AAZ6-01A-11R-A41B-07 TANC2-MED13 1 2 chr17:63319090:+ chr17:62035608:- FRAMESHIFT NA TCGA-UU-A93S-01A-21R-A41B-07 ZFAND1-STAU2 8 19 chr8:81732199:- chr8:73422702:- . NA TCGA-UU-A93S-01A-21R-A41B-07 DNM2-TGIF1 2 13 chr19:10759811:+ chr18:3418143:+ . NA TCGA-UU-A93S-01A-21R-A41B-07 UBE2K-LIAS 2 13 chr4:39698390:+ chr4:39460790:+ INFRAME NA TCGA-UU-A93S-01A-21R-A41B-07 TRIM37-C17orf67 2 9 chr17:59041813:- chr17:56825321:- . NA TCGA-UU-A93S-01A-21R-A41B-07 TUBGCP4-TMEM62 2 7 chr15:43386330:+ chr15:43178607:+ FRAMESHIFT NA TCGA-UU-A93S-01A-21R-A41B-07 DNM2-ILF3 1 7 chr19:10718403:+ chr19:10677163:+ INFRAME NA TCGA-UU-A93S-01A-21R-A41B-07 ERBB2-PPP1R1B 1 3 chr17:39715939:+ chr17:39633883:+ INFRAME NA TCGA-V7-A7HQ-01A-11R-A33J-07 NF2-EIF3D 3 9 chr22:29604112:+ chr22:36512602:- INFRAME Likely Oncogenic NA TCGA-WT-AB41-01A-11R-A41B-07 ADAM9-PROSC 6 17 chr8:39007983:+ chr8:37765526:+ INFRAME NA TCGA-XX-A899-01A-11R-A36F-07 PAK1-SHANK2 30 82 chr11:77473552:- chr11:70661678:- . NA TCGA-XX-A899-01A-11R-A36F-07 PAK1-CWF19L2 12 24 chr11:77473552:- chr11:107455776:- . NA TCGA-XX-A899-01A-11R-A36F-07 RSF1-ADAM2 6 33 chr11:77747036:- chr8:39749744:- INFRAME NA TCGA-XX-A899-01A-11R-A36F-07 EMSY-SHANK2 5 25 chr11:76526635:+ chr11:70661678:- FRAMESHIFT NA TCGA-XX-A899-01A-11R-A36F-07 XRRA1-GUCY1A2 3 24 chr11:74945018:- chr11:106776582:- . NA TCGA-XX-A899-01A-11R-A36F-07 COMMD10-CHSY3 2 3 chr5:116134178:+ chr5:130184229:+ INFRAME NA TCGA-XX-A899-01A-11R-A36F-07 HOOK3-C2CD3 1 3 chr8:43010405:+ chr11:74054671:- FRAMESHIFT NA TCGA-XX-A89A-01A-11R-A36F-07 TRIT1-CHI3L2 23 143 chr1:39883318:- chr1:111229852:+ INFRAME NA TCGA-XX-A89A-01A-11R-A36F-07 SHANK2-MYEOV 21 97 chr11:70798443:- chr11:69341510:+ . NA TCGA-XX-A89A-01A-11R-A36F-07 ILF3-DENND2D 4 8 chr19:10677310:+ chr1:111196056:- FRAMESHIFT NA TCGA-Z7-A8R6-01A-11R-A41B-07 PGM2L1-PPME1 10 44 chr11:74398051:- chr11:74250954:+ FRAMESHIFT NA TCGA-Z7-A8R6-01A-11R-A41B-07 BRD7-ZNF423 5 21 chr16:50354425:- chr16:49525494:- FRAMESHIFT NA TCGA-Z7-A8R6-01A-11R-A41B-07 ARHGEF3-FAM208A 1 7 chr3:56958823:- chr3:56673725:- FRAMESHIFT NA TCGA-4J-AA1J-01A-21R-A38B-07 RUNDC1-RGS9 10 30 chr17:42990436:+ chr17:65227275:+ FRAMESHIFT NA TCGA-4J-AA1J-01A-21R-A38B-07 PTGES3L-RGS9 4 16 chr17:42979170:- chr17:65210488:+ INFRAME NA TCGA-4J-AA1J-01A-21R-A38B-07 CDC27-C17orf53 3 1 chr17:47141853:- chr17:44154556:+ INFRAME NA TCGA-4J-AA1J-01A-21R-A38B-07 ERBB2-PPP1R1B 1 1 chr17:39700311:+ chr17:39633883:+ INFRAME NA TCGA-BI-A0VR-01A-11R-A10U-07 PPM1D-C17orf64 1 6 chr17:60600886:+ chr17:60429362:+ FRAMESHIFT NA TCGA-BI-A0VR-01A-11R-A10U-07 CTNNA1-AP3B1 1 1 chr5:138887642:+ chr5:78181662:- INFRAME NA TCGA-BI-A0VS-01A-11R-A10U-07 RASSF8-ETNK1 8 83 chr12:25995130:+ chr12:22643763:+ . NA TCGA-BI-A0VS-01A-11R-A10U-07 TM9SF4-PLAGL2 2 6 chr20:32161365:+ chr20:32202292:- . NA TCGA-C5-A1BJ-01A-11R-A13Y-07 JARID2-MDGA1 1 2 chr6:15246584:+ chr6:37664106:- FRAMESHIFT NA TCGA-C5-A1BL-01A-11R-A13Y-07 STAG1-IL20RB 1 1 chr3:136363366:- chr3:137010113:+ INFRAME NA TCGA-C5-A1BM-01A-11R-A13Y-07 MICALL2-PSMG3 27 118 chr7:1459184:- chr7:1567850:- FRAMESHIFT NA TCGA-C5-A1M5-01A-11R-A13Y-07 ZNF667-ZSCAN5B 3 10 chr19:56471699:- chr19:56192053:- . NA TCGA-C5-A1M5-01A-11R-A13Y-07 COL22A1-ZFAT 2 6 chr8:138591424:- chr8:134637712:- INFRAME NA TCGA-C5-A1M6-01A-11R-A13Y-07 NME6-SPINK8 63 580 chr3:48296727:- chr3:48309946:- FRAMESHIFT NA TCGA-C5-A1M7-01A-11R-A13Y-07 PIAS4-CCDC94 6 46 chr19:4013349:+ chr19:4267624:+ FRAMESHIFT NA TCGA-C5-A1M8-01A-21R-A13Y-07 SIPA1-RHOD 4 6 chr11:65647658:+ chr11:67065896:+ FRAMESHIFT NA TCGA-C5-A1MJ-01A-11R-A14Y-07 SNX29-CIITA 4 19 chr16:12078915:+ chr16:10895282:+ INFRAME NA TCGA-C5-A1MJ-01A-11R-A14Y-07 DPH7-ZMYND19 1 7 chr9:137574208:- chr9:137587107:- FRAMESHIFT NA TCGA-C5-A1MK-01A-11R-A14Y-07 TMEM50B-XXYLT1 7 45 chr21:33479838:- chr3:195070111:- . NA TCGA-C5-A1MK-01A-11R-A14Y-07 ASXL1-BPIFB2 7 22 chr20:32358832:+ chr20:33008541:+ . Likely Oncogenic NA TCGA-C5-A1MK-01A-11R-A14Y-07 LEXM-TTC4 5 26 chr1:54808011:+ chr1:54737582:+ INFRAME NA TCGA-C5-A1MK-01A-11R-A14Y-07 TASP1-DHCR7 2 21 chr20:13435044:- chr11:71441440:- INFRAME NA TCGA-C5-A1MK-01A-11R-A14Y-07 GON4L-SERPINB7 3 5 chr1:155813634:- chr18:63782355:+ . NA TCGA-C5-A1MK-01A-11R-A14Y-07 EPB41L1-IFT52 1 5 chr20:36112480:+ chr20:43635926:+ . NA TCGA-C5-A1ML-01A-11R-A14Y-07 FXR1-NAALADL2 11 30 chr3:180935231:+ chr3:175447229:+ INFRAME NA TCGA-C5-A1ML-01A-11R-A14Y-07 NAALADL2-EPHB3 1 9 chr3:175324325:+ chr3:184581253:+ FRAMESHIFT NA TCGA-C5-A2LT-01A-11R-A18M-07 MAPK8-ARFIP1 4 27 chr10:48325965:+ chr4:152829625:+ . NA TCGA-C5-A2LT-01A-11R-A18M-07 SRRD-SNX32 4 2 chr22:26486063:+ chr11:65849478:+ FRAMESHIFT NA TCGA-C5-A2LV-01A-11R-A18M-07 EMC10-ASPDH 1 6 chr19:50480977:+ chr19:50511773:- FRAMESHIFT NA TCGA-C5-A2LX-01A-11R-A18M-07 ERBB2-IKZF3 5 26 chr17:39716605:+ chr17:39829488:- FRAMESHIFT NA TCGA-C5-A2LX-01A-11R-A18M-07 PKD1-UBE2I 6 3 chr16:2105322:- chr16:1315654:+ INFRAME NA TCGA-C5-A2LX-01A-11R-A18M-07 MIR205HG-RPL14 1000 1000 chr1:209432707:+ chr3:40461608:+ . NA TCGA-C5-A2M1-01A-11R-A18M-07 PPP1R37-GLTSCR1 4 11 chr19:45093527:+ chr19:47670443:+ . NA TCGA-C5-A3HF-01A-11R-A213-07 SPEN-DNAJC16 13 14 chr1:15848150:+ chr1:15559526:+ FRAMESHIFT Likely Oncogenic NA TCGA-C5-A7CG-01A-11R-A32P-07 INTS6-BZW2 6 15 chr13:51451025:- chr7:16674412:+ FRAMESHIFT NA TCGA-C5-A7CH-01A-11R-A33Z-07 GOLGA5-RNF212B 5 1 chr14:92824644:+ chr14:23193325:+ . NA TCGA-C5-A7CH-01A-11R-A33Z-07 ATP2B1-CEP290 1 6 chr12:89616802:- chr12:88084852:- INFRAME NA TCGA-C5-A7CJ-01A-11R-A32P-07 RUNX1-RCAN1 3 6 chr21:34859474:- chr21:34523710:- FRAMESHIFT Likely Oncogenic NA TCGA-C5-A7CJ-01A-11R-A32P-07 MX1-ERG 1 9 chr21:41437152:+ chr21:38445621:- FRAMESHIFT Likely Oncogenic NA TCGA-C5-A7CK-01A-11R-A32P-07 SGO1-EFHB 8 43 chr3:20186059:- chr3:19905749:- . NA TCGA-C5-A7CK-01A-11R-A32P-07 ZNF532-DOK6 1 9 chr18:58865579:+ chr18:69841244:+ . NA TCGA-C5-A7CM-01A-11R-A33Z-07 ANKRD40-NFIX 5 6 chr17:50707521:- chr19:13025021:+ INFRAME NA TCGA-C5-A7CM-01A-11R-A33Z-07 CRCP-ADAM22 2 5 chr7:66114970:+ chr7:88075626:+ INFRAME NA TCGA-C5-A7CO-01A-11R-A352-07 CHD6-CTNNBL1 2 24 chr20:41512846:- chr20:37859899:+ INFRAME NA TCGA-C5-A7CO-01A-11R-A352-07 AHCY-ACTR5 3 4 chr20:34281027:- chr20:38752131:+ . NA TCGA-C5-A7CO-01A-11R-A352-07 F11R-USF1 2 8 chr1:161021010:- chr1:161043360:- . NA TCGA-C5-A7UC-01A-11R-A352-07 YAE1D1-GJC3 4 16 chr7:39566547:+ chr7:99923603:- FRAMESHIFT NA TCGA-C5-A7UC-01A-11R-A352-07 ASCC1-MICU1 3 10 chr10:72196811:- chr10:72379583:- INFRAME NA TCGA-C5-A7UH-01A-11R-A352-07 NSD1-DPEP2 3 59 chr5:177192019:+ chr16:67989398:- INFRAME Likely Oncogenic NA TCGA-C5-A7UH-01A-11R-A352-07 SOGA1-RBL1 3 13 chr20:36829054:- chr20:37003866:- INFRAME NA TCGA-C5-A7UH-01A-11R-A352-07 EPHB3-P2RY12 2 5 chr3:184562353:+ chr3:151340760:- . NA TCGA-C5-A7X3-01A-11R-A352-07 LMAN2-NOP16 14 35 chr5:177351173:- chr5:176386909:- INFRAME NA TCGA-C5-A7X3-01A-11R-A352-07 PRKD2-RCN3 10 45 chr19:46711643:- chr19:49543191:+ . NA TCGA-C5-A7X3-01A-11R-A352-07 PRR12-CDC42EP5 4 30 chr19:49621622:+ chr19:54471685:- . NA TCGA-C5-A7X3-01A-11R-A352-07 KREMEN1-HSCB 7 14 chr22:29142100:+ chr22:28751241:+ FRAMESHIFT NA TCGA-C5-A7X3-01A-11R-A352-07 ZNF384-CDCA3 5 15 chr12:6669031:- chr12:6849664:- INFRAME NA TCGA-C5-A7X3-01A-11R-A352-07 WEE1-CHRNA3 4 13 chr11:9586856:+ chr15:78602264:- INFRAME NA TCGA-C5-A7X3-01A-11R-A352-07 TBC1D17-PRR12 1 6 chr19:49887573:+ chr19:49614533:+ INFRAME NA TCGA-C5-A7X3-01A-11R-A352-07 MCTP2-PARP6 1 3 chr15:94358612:+ chr15:72271287:- . NA TCGA-C5-A7X5-01A-11R-A36F-07 TMEM87B-MERTK 62 157 chr2:112055756:+ chr2:111994251:+ INFRAME NA TCGA-C5-A7X5-01A-11R-A36F-07 FDX1-KNCN 16 51 chr11:110435958:+ chr1:46550002:- INFRAME NA TCGA-C5-A7X5-01A-11R-A36F-07 BRD4-CSN2 25 11 chr19:15332290:- chr4:69961007:- . Oncogenic NA TCGA-C5-A7X5-01A-11R-A36F-07 BRD4-SLC1A6 22 16 chr19:15332290:- chr19:14972917:- . Oncogenic NA TCGA-C5-A7X5-01A-11R-A36F-07 ZNF529-FFAR2 8 42 chr19:36572333:- chr19:35449714:+ . NA TCGA-C5-A7X5-01A-11R-A36F-07 MOB4-COQ10B 6 26 chr2:197540437:+ chr2:197470070:+ INFRAME NA TCGA-C5-A7X5-01A-11R-A36F-07 UBE2O-MXRA7 6 22 chr17:76452725:- chr17:76688176:- INFRAME NA TCGA-C5-A7X5-01A-11R-A36F-07 ZNF148-OSBPL11 3 8 chr3:125277726:- chr3:125538633:- FRAMESHIFT NA TCGA-C5-A7X5-01A-11R-A36F-07 KIZ-SLPI 1 10 chr20:21136552:+ chr20:45253733:- FRAMESHIFT NA TCGA-C5-A7X5-01A-11R-A36F-07 WARS2-ZAR1 1 10 chr1:119076350:- chr4:48494101:+ INFRAME NA TCGA-C5-A7X5-01A-11R-A36F-07 ANAPC1-LIMS1 1 5 chr2:111838438:- chr2:108675878:+ FRAMESHIFT NA TCGA-C5-A7X5-01A-11R-A36F-07 WARS2-TMEM87B 1 5 chr1:119076350:- chr2:112081057:+ INFRAME NA TCGA-C5-A7X5-01A-11R-A36F-07 MUC3A-FBXL13 1 2 chr7:100966743:+ chr7:102884312:- FRAMESHIFT NA TCGA-C5-A7XC-01A-11R-A38B-07 EHMT1-GFI1B 14 15 chr9:137619049:+ chr9:132978464:+ . NA TCGA-C5-A8XH-01A-11R-A37O-07 TRAF3-SFXN1 5 9 chr14:102830472:+ chr5:175492095:+ . NA TCGA-C5-A8XH-01A-11R-A37O-07 RXRA-BCAS3 3 5 chr9:134326659:+ chr17:60868576:+ FRAMESHIFT NA TCGA-C5-A8XI-01A-11R-A37O-07 IGHJ2-IGHGP 2 13 chr14:105865199:- chr14:105668565:- . NA TCGA-C5-A8YQ-01A-11R-A37O-07 OTUD3-HES2 16 90 chr1:19882734:+ chr1:6413282:- FRAMESHIFT NA TCGA-C5-A8YQ-01A-11R-A37O-07 ACOT7-MIB2 9 44 chr1:6318492:- chr1:1625286:+ INFRAME NA TCGA-C5-A8YQ-01A-11R-A37O-07 RBM15-ZYG11B 14 20 chr1:110340002:+ chr1:52784877:+ INFRAME NA TCGA-C5-A8YQ-01A-11R-A37O-07 PATJ-CENPS 10 34 chr1:61827583:+ chr1:10433842:+ INFRAME NA TCGA-C5-A8YQ-01A-11R-A37O-07 WASF2-ACOT7 1 6 chr1:27489986:- chr1:6294980:- . NA TCGA-C5-A8YQ-01A-11R-A37O-07 EPHB2-SYNC 1 3 chr1:22785076:+ chr1:32696044:- FRAMESHIFT NA TCGA-C5-A8YR-01A-12R-A37O-07 CALD1-TMEM140 2 25 chr7:134867804:+ chr7:135164418:+ . NA TCGA-C5-A8YR-01A-12R-A37O-07 PLCG2-CMIP 1 2 chr16:81786182:+ chr16:81699685:+ FRAMESHIFT NA TCGA-C5-A8YR-01A-12R-A37O-07 BLNK-TLL2 1 1 chr10:96271352:- chr10:96397302:- FRAMESHIFT NA TCGA-C5-A8ZZ-01A-11R-A37O-07 FNDC3B-SOX2-OT 17 138 chr3:172112590:+ chr3:181699598:+ . NA TCGA-C5-A8ZZ-01A-11R-A37O-07 FNDC3B-SOX2OT_exon4 9 24 chr3:172112590:+ chr3:181715185:+ . NA TCGA-C5-A8ZZ-01A-11R-A37O-07 FNDC3B-TPRG1 1 2 chr3:172112590:+ chr3:189310386:+ FRAMESHIFT NA TCGA-C5-A907-01A-11R-A37O-07 BCAS3-RPS6KB1 33 39 chr17:60677914:+ chr17:59912684:+ . NA TCGA-C5-A907-01A-11R-A37O-07 VRK3-PPP6R1 7 43 chr19:50000790:- chr19:55242488:- INFRAME NA TCGA-C5-A907-01A-11R-A37O-07 ZNF677-WDR88 8 11 chr19:53254834:- chr19:33175396:+ . NA TCGA-C5-A907-01A-11R-A37O-07 LSM14A-KNDC1 4 26 chr19:34172763:+ chr10:133183344:+ FRAMESHIFT NA TCGA-C5-A907-01A-11R-A37O-07 HNRNPUL1-BRSK1 2 14 chr19:41281275:+ chr19:55284521:+ INFRAME NA TCGA-DG-A2KL-01A-11R-A180-07 DSP-RCAN2 78 505 chr6:7572068:+ chr6:46248896:- INFRAME NA TCGA-DG-A2KL-01A-11R-A180-07 CLASP2-GLB1 1 22 chr3:33632292:- chr3:33072713:- INFRAME NA TCGA-DG-A2KL-01A-11R-A180-07 GMDS-KIF6 1 3 chr6:2245321:- chr6:39720811:- INFRAME NA TCGA-DG-A2KM-01A-11R-A180-07 ANKRD27-TDRD12 9 28 chr19:32615658:- chr19:32731725:+ INFRAME NA TCGA-DS-A0VL-01A-21R-A10U-07 BIRC2-TMEM123 134 527 chr11:102368548:+ chr11:102402206:- INFRAME NA TCGA-DS-A0VL-01A-21R-A10U-07 USP25-CYYR1 6 38 chr21:15818846:+ chr21:26468631:- FRAMESHIFT NA TCGA-DS-A0VL-01A-21R-A10U-07 UBE2D2-C9orf3 2 1 chr5:139526612:+ chr9:95086682:+ . NA TCGA-DS-A0VM-01A-11R-A10U-07 TAOK3-SUDS3 8 23 chr12:118372648:- chr12:118386114:+ . NA TCGA-DS-A0VM-01A-11R-A10U-07 GATAD2B-S100A11 1 6 chr1:153922733:- chr1:152033800:- . NA TCGA-DS-A0VN-01A-21R-A10U-07 PTPN13-AFF1 1 6 chr4:86774531:+ chr4:86973830:+ . NA TCGA-DS-A3LQ-01A-21R-A21T-07 FZD6-BAALC 27 84 chr8:103300284:+ chr8:103227989:+ INFRAME NA TCGA-DS-A3LQ-01A-21R-A21T-07 KIAA0930-SMC1B 5 12 chr22:45211956:- chr22:45345569:- INFRAME NA TCGA-DS-A3LQ-01A-21R-A21T-07 WDHD1-DLGAP5 1 16 chr14:55007280:- chr14:55150848:- FRAMESHIFT NA TCGA-DS-A3LQ-01A-21R-A21T-07 RAF1-RPL32 2 10 chr3:12663813:- chr3:12836223:- . Likely Oncogenic NA TCGA-DS-A3LQ-01A-21R-A21T-07 MATN2-LAPTM4B 3 1 chr8:97941899:+ chr8:97815328:+ INFRAME NA TCGA-DS-A5RQ-01A-11R-A28H-07 CBX5-NFE2 4 9 chr12:54252041:- chr12:54295304:- . NA TCGA-DS-A5RQ-01A-11R-A28H-07 CDH8-RFX1 2 3 chr16:61901179:- chr19:13973127:- FRAMESHIFT NA TCGA-DS-A5RQ-01A-11R-A28H-07 MELTF-DERL2 2 1 chr3:197003901:- chr17:5485216:- FRAMESHIFT NA TCGA-DS-A7WF-01A-11R-A352-07 SMARCA4-CARM1 1 2 chr19:10991323:+ chr19:10921615:+ FRAMESHIFT Likely Oncogenic NA TCGA-DS-A7WF-01A-11R-A352-07 ERBB2-CTTN 1 1 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-DS-A7WH-01A-22R-A352-07 SH3BP4-MST1R 6 74 chr2:234995376:+ chr3:49899263:- . NA TCGA-DS-A7WH-01A-22R-A352-07 ASXL1-EIF2S2 5 7 chr20:32369123:+ chr20:34105545:- INFRAME Likely Oncogenic NA TCGA-DS-A7WH-01A-22R-A352-07 ZRANB1-LHPP 3 12 chr10:124983688:+ chr10:124613264:+ INFRAME NA TCGA-EA-A1QS-01A-61R-A22U-07 EIF5B-LYG1 3 14 chr2:99337589:+ chr2:99292640:- FRAMESHIFT NA TCGA-EA-A1QS-01A-61R-A22U-07 NOC2L-C1orf159 5 5 chr1:959215:- chr1:1087597:- INFRAME NA TCGA-EA-A1QS-01A-61R-A22U-07 ZBTB20-PGD 1 19 chr3:114801101:- chr1:10419417:+ . NA TCGA-EA-A1QS-01A-61R-A22U-07 COL16A1-SPOCD1 1 4 chr1:31689741:- chr1:31801705:- INFRAME NA TCGA-EA-A1QT-01A-11R-A14Y-07 KMT5B-C11orf72 14 139 chr11:68213679:- chr11:67605134:- . NA TCGA-EA-A1QT-01A-11R-A14Y-07 RIC1-PFN2 21 90 chr9:5629453:+ chr3:149968550:- INFRAME NA TCGA-EA-A1QT-01A-11R-A14Y-07 RIC1-MLANA 3 19 chr9:5714003:+ chr9:5890983:+ . NA TCGA-EA-A1QT-01A-11R-A14Y-07 PPP6R3-C11orf80 1 4 chr11:68505271:+ chr11:66816053:+ . NA TCGA-EA-A1QT-01A-11R-A14Y-07 PRKDC-SPIDR 1 3 chr8:47817450:- chr8:47595811:+ INFRAME NA TCGA-EA-A3HR-01A-11R-A213-07 SAMD4B-SLFN5 6 28 chr19:39357089:+ chr17:35264183:+ INFRAME NA TCGA-EA-A3HS-01A-11R-A213-07 WDFY3-MAPK10 1 3 chr4:84896911:- chr4:86300860:- . NA TCGA-EA-A3QD-01A-32R-A22U-07 PPTC7-GPN3 7 20 chr12:110582809:- chr12:110457634:- INFRAME NA TCGA-EA-A3QD-01A-32R-A22U-07 BCL2L10-GNB5 1 3 chr15:52112238:- chr15:52154076:- FRAMESHIFT NA TCGA-EA-A3Y4-01A-51R-A24H-07 ARL8A-UBE2T 1 23 chr1:202144450:- chr1:202335058:- FRAMESHIFT NA TCGA-EA-A411-01A-11R-A24H-07 PHF21A-TMEM123 5 9 chr11:46076754:- chr11:102402206:- FRAMESHIFT NA TCGA-EA-A439-01A-11R-A24H-07 LMAN2L-FAM178B 3 16 chr2:96733519:- chr2:96878493:- INFRAME NA TCGA-EA-A5ZD-01A-11R-A28H-07 PTPN13-AFF1 11 118 chr4:86689190:+ chr4:87084120:+ INFRAME NA TCGA-EA-A5ZE-01A-11R-A28H-07 FAT1-SORBS2 8 23 chr4:186602903:- chr4:185775366:- . Likely Oncogenic NA TCGA-EA-A5ZE-01A-11R-A28H-07 BOLA2-CORO1A 1000 1000 chr16:29454017:- chr16:30185208:+ . NA TCGA-EA-A97N-01A-11R-A38B-07 TRIP12-SLC16A14 1 7 chr2:229858772:- chr2:230037531:- INFRAME NA TCGA-EK-A2H0-01A-11R-A180-07 RIOK1-EYS 19 67 chr6:7414390:+ chr6:65296119:- FRAMESHIFT NA TCGA-EK-A2H0-01A-11R-A180-07 CCT3-IQGAP3 3 30 chr1:156310558:- chr1:156540916:- FRAMESHIFT NA TCGA-EK-A2H0-01A-11R-A180-07 PXN-RAB35 1 7 chr12:120265617:- chr12:120108467:- INFRAME NA TCGA-EK-A2IP-01A-11R-A180-07 ALDH3B1-PC 1 4 chr11:68019255:+ chr11:66872159:- INFRAME NA TCGA-EK-A2PG-01A-11R-A18M-07 TTC39B-LURAP1L 17 88 chr9:15307084:- chr9:12821386:+ INFRAME NA TCGA-EK-A2PG-01A-11R-A18M-07 TWF2-WDR82 3 27 chr3:52238992:- chr3:52257519:- FRAMESHIFT NA TCGA-EK-A2PG-01A-11R-A18M-07 CEP295-SMCO4 3 8 chr11:93667807:+ chr11:93479269:- . NA TCGA-EK-A2PG-01A-11R-A18M-07 SAFB-C19orf70 1 2 chr19:5653420:+ chr19:5678648:- FRAMESHIFT NA TCGA-EK-A2PI-01A-11R-A18M-07 PKMYT1-FLYWCH1 1 28 chr16:2969888:- chr16:2914176:+ . NA TCGA-EK-A2PI-01A-11R-A18M-07 TAF1-ITGB1BP2 1 9 chrX:71368170:+ chrX:71303627:+ FRAMESHIFT NA TCGA-EK-A2PM-01A-11R-A18M-07 TRA2A-AQP1 74 177 chr7:23531789:- chr7:30922066:+ INFRAME NA TCGA-EK-A2PM-01A-11R-A18M-07 CCDC113-CPNE2 6 15 chr16:58267586:+ chr16:57146085:+ INFRAME NA TCGA-EK-A2PM-01A-11R-A18M-07 MYH11-YME1L1 5 6 chr16:15726848:- chr10:27149040:- INFRAME NA TCGA-EK-A2PM-01A-11R-A18M-07 TANC1-MARCH7 2 6 chr2:159001189:+ chr2:159729009:+ . NA TCGA-EK-A2PM-01A-11R-A18M-07 CYP4F11-CIB3 1 4 chr19:15934211:- chr19:16164913:- FRAMESHIFT NA TCGA-EK-A2PM-01A-11R-A18M-07 MIR205HG-RPL14 1000 1000 chr1:209432329:+ chr3:40462069:+ . NA TCGA-EK-A2R7-01A-11R-A18M-07 PAPOLA-NPAS3 3 8 chr14:96502600:+ chr14:33676211:+ FRAMESHIFT NA TCGA-EK-A2R7-01A-11R-A18M-07 MCM6-RAB3GAP1 2 1 chr2:135865013:- chr2:135129995:+ INFRAME NA TCGA-EK-A2R9-01A-11R-A18M-07 ECT2-EGFEM1P 27 108 chr3:172757165:+ chr3:168314071:+ . NA TCGA-EK-A2R9-01A-11R-A18M-07 EIF5A2-PRKCI 1 4 chr3:170908543:- chr3:170293383:+ . NA TCGA-EK-A2RA-01A-11R-A18M-07 LMO2-CD59 3 5 chr11:33864602:- chr11:33722463:- . NA TCGA-EK-A2RC-01A-11R-A18M-07 MIR205HG-RPL14 1000 1000 chr1:209432330:+ chr3:40462064:+ . NA TCGA-EK-A2RJ-01A-11R-A18M-07 LRP2-FASTKD1 13 49 chr2:169162472:- chr2:169531490:- INFRAME NA TCGA-EK-A2RJ-01A-11R-A18M-07 CHST8-C19orf24 11 26 chr19:33689391:+ chr19:1278777:+ . NA TCGA-EK-A2RJ-01A-11R-A18M-07 HNRNPLL-NFATC3 6 21 chr2:38585644:- chr16:68157869:+ INFRAME NA TCGA-EK-A2RL-01A-11R-A18M-07 MACF1-AKIRIN1 1000 1000 chr1:39105716:+ chr1:38998170:+ . NA TCGA-EK-A2RM-01A-21R-A18M-07 STAT5A-YWHAEP7 18 152 chr17:42290022:+ chr17:37845379:- . NA TCGA-EK-A2RM-01A-21R-A18M-07 SCMH1-SDCBP2 13 28 chr1:41242059:- chr20:1320435:- . NA TCGA-EK-A2RM-01A-21R-A18M-07 HIBCH-NEMP2 1 3 chr2:190319716:- chr2:190525378:- FRAMESHIFT NA TCGA-EK-A3GJ-01A-21R-A213-07 BRD4-NOTCH3 20 6 chr19:15332290:- chr19:15162562:- . Oncogenic NA TCGA-EK-A3GJ-01A-21R-A213-07 VMP1-TUBD1 2 12 chr17:59817773:+ chr17:59866749:- INFRAME NA TCGA-EK-A3GM-01A-11R-A213-07 MTMR12-CDH18 2 7 chr5:32239001:- chr5:19520778:- FRAMESHIFT NA TCGA-EK-A3GM-01A-11R-A213-07 DSG2-TTR 1000 1000 chr18:31498295:+ chr18:31592895:+ . NA TCGA-EK-A3GN-01A-11R-A213-07 PIK3C2B-KISS1 5 8 chr1:204494356:- chr1:204192914:- . NA TCGA-EK-A3GN-01A-11R-A213-07 YEATS4-PGAM1P5 3 15 chr12:69370975:+ chr12:95649328:+ . NA TCGA-EX-A8YF-01A-11R-A37O-07 SPOCK2-ASCC1 2 12 chr10:72072144:- chr10:72097450:- FRAMESHIFT NA TCGA-FU-A23L-01A-11R-A16R-07 SDAD1-CXCL9 2 9 chr4:75981372:- chr4:76006274:- FRAMESHIFT NA TCGA-FU-A23L-01A-11R-A16R-07 FMO2-MROH9 1 9 chr1:171205634:+ chr1:171062132:+ INFRAME NA TCGA-FU-A2QG-01A-11R-A18M-07 ITGA2-GPX8 7 99 chr5:52989532:+ chr5:55160330:+ FRAMESHIFT NA TCGA-FU-A3NI-01A-11R-A21T-07 FN3K-MYO16 2 7 chr17:82748977:+ chr13:108883059:+ INFRAME NA TCGA-FU-A3TQ-01A-11R-A22U-07 ANKRD11-E4F1 11 13 chr16:89490245:- chr16:2228372:+ . NA TCGA-FU-A3TQ-01A-11R-A22U-07 PDPK1-UBALD1 5 16 chr16:2538136:+ chr16:4610555:- INFRAME NA TCGA-FU-A3TX-01A-11R-A22U-07 FDCSP-RGAG1 3 145 chr4:70231251:+ chrX:110419002:+ . NA TCGA-FU-A3TX-01A-11R-A22U-07 PPP4R1-PAWR 4 72 chr18:9570157:- chr12:79668408:- . NA TCGA-FU-A3TX-01A-11R-A22U-07 LONP2-EGLN3 2 7 chr16:48270274:+ chr14:34169646:- . NA TCGA-FU-A3TX-01A-11R-A22U-07 DOCK4-TPH2 1 8 chr7:112206102:- chr12:71972519:+ FRAMESHIFT NA TCGA-FU-A3TX-01A-11R-A22U-07 WHRN-TNC 1000 1000 chr9:114403306:- chr9:115035229:- INFRAME NA TCGA-FU-A40J-01A-11R-A24H-07 GABRP-KCNIP1 5 41 chr5:170805853:+ chr5:170718758:+ INFRAME NA TCGA-FU-A40J-01A-11R-A24H-07 CLEC16A-RMI2 2 1 chr16:11126146:+ chr16:11350642:+ INFRAME NA TCGA-FU-A5XV-01A-11R-A28H-07 NPLOC4-OXLD1 2 9 chr17:81629725:- chr17:81665584:- INFRAME NA TCGA-FU-A5XV-01A-11R-A28H-07 SLC22A5-RAD50 1 3 chr5:132370365:+ chr5:132559284:+ INFRAME Likely Oncogenic NA TCGA-HM-A3JJ-01A-21R-A21T-07 ABLIM3-TRPM8 3 6 chr5:149142108:+ chr2:233926533:+ . NA TCGA-HM-A6W2-01A-21R-A33Z-07 NUDT14-BRF1 3 17 chr14:105181129:- chr14:105210588:- FRAMESHIFT NA TCGA-HM-A6W2-01A-21R-A33Z-07 ALKBH5-GID4 4 5 chr17:18185013:+ chr17:18058868:+ FRAMESHIFT NA TCGA-HM-A6W2-01A-21R-A33Z-07 GON4L-ARHGEF2 4 5 chr1:155776395:- chr1:155969300:- INFRAME NA TCGA-HM-A6W2-01A-21R-A33Z-07 SGSM2-SRR 1 3 chr17:2337745:+ chr17:2321306:+ INFRAME NA TCGA-HM-A6W2-01A-21R-A33Z-07 SFI1-DEPDC5 1 1 chr22:31618226:+ chr22:31833915:+ FRAMESHIFT NA TCGA-HM-A6W2-01A-21R-A33Z-07 TRAF3IP2-REV3L 1 1 chr6:111580197:- chr6:111333367:- FRAMESHIFT NA TCGA-IR-A3LA-01A-11R-A22U-07 B2M-PATL2 7 69 chr15:44711613:+ chr15:44676565:- . Likely Oncogenic NA TCGA-IR-A3LA-01A-11R-A22U-07 CPT1A-SYT12 8 28 chr11:68793315:- chr11:67021869:+ . NA TCGA-IR-A3LA-01A-11R-A22U-07 DAND5-GCDH 3 5 chr19:12965193:+ chr19:12896910:+ . NA TCGA-IR-A3LB-01A-11R-A24H-07 UBE3A-DTWD1 11 13 chr15:25375465:- chr15:49625113:+ . NA TCGA-IR-A3LB-01A-11R-A24H-07 MED13L-IQCD 1 13 chr12:116237468:- chr12:113208259:- . NA TCGA-IR-A3LH-01A-21R-A213-07 NUP62-TBC1D17 28 129 chr19:49927694:- chr19:49882041:+ . NA TCGA-IR-A3LH-01A-21R-A213-07 IL4I1-TBC1D17 28 128 chr19:49927694:- chr19:49882041:+ . NA TCGA-IR-A3LH-01A-21R-A213-07 ZNF226-AKT2 4 30 chr19:44165807:+ chr19:40242687:- . Likely Oncogenic NA TCGA-IR-A3LH-01A-21R-A213-07 AP2A1-VRK3 1 25 chr19:49805576:+ chr19:49979242:- FRAMESHIFT NA TCGA-IR-A3LH-01A-21R-A213-07 LMTK3-NOSIP 3 7 chr19:48497393:- chr19:49560692:- . NA TCGA-IR-A3LH-01A-21R-A213-07 TPX2-ID1 3 3 chr20:31739621:+ chr20:31605372:+ . NA TCGA-IR-A3LH-01A-21R-A213-07 CADM4-ZSCAN18 1 4 chr19:43639727:- chr19:58090386:- INFRAME NA TCGA-IR-A3LH-01A-21R-A213-07 HNRNPUL1-GNG8 1000 1000 chr19:41281275:+ chr19:46634204:- INFRAME NA TCGA-IR-A3LI-01A-11R-A32Y-07 TRPV4-GIT2 6 19 chr12:109792363:- chr12:109953234:- INFRAME NA TCGA-IR-A3LI-01A-11R-A32Y-07 GNAS-GAPDH 1 1 chr20:58903791:+ chr12:6538101:+ FRAMESHIFT NA TCGA-IR-A3LK-01A-12R-A213-07 KNL1-LIPC 18 549 chr15:40594392:+ chr15:58563505:+ . NA TCGA-IR-A3LK-01A-12R-A213-07 WFDC5-SDC4 1 20 chr20:45114999:- chr20:45333069:- INFRAME NA TCGA-IR-A3LK-01A-12R-A213-07 APIP-SLC1A2 4 7 chr11:34888293:- chr11:35265758:- INFRAME NA TCGA-IR-A3LK-01A-12R-A213-07 PPFIA3-IZUMO1 1 4 chr19:49119722:+ chr19:48745288:- . NA TCGA-IR-A3LK-01A-12R-A213-07 PLCB1-ITPA 1 2 chr20:8150371:+ chr20:3213985:+ INFRAME NA TCGA-JW-A5VG-01A-11R-A28H-07 CASP8-STRADB 1 2 chr2:201234112:+ chr2:201454746:+ . Likely Oncogenic NA TCGA-JW-A5VI-01A-11R-A28H-07 ZNF227-HNRNPUL1 58 720 chr19:44217852:+ chr19:41292245:+ INFRAME NA TCGA-JW-A5VI-01A-11R-A28H-07 HID1-SRP68 8 33 chr17:74972591:- chr17:76061574:- INFRAME NA TCGA-JW-A5VJ-01A-11R-A28H-07 GET4-DNAAF5 16 104 chr7:887519:+ chr7:754589:+ INFRAME NA TCGA-JW-A5VJ-01A-11R-A28H-07 SERPINB7-SERPINB5 6 33 chr18:63782540:+ chr18:63484422:+ . NA TCGA-JW-A5VJ-01A-11R-A28H-07 PDHX-STK32B 6 20 chr11:34931484:+ chr4:5416845:+ INFRAME NA TCGA-JW-A5VJ-01A-11R-A28H-07 PPP5C-HIF3A 2 7 chr19:46376574:+ chr19:46334905:+ INFRAME NA TCGA-JW-A5VJ-01A-11R-A28H-07 RASAL1-DDX54 1 9 chr12:113108085:- chr12:113179026:- INFRAME NA TCGA-JW-A5VJ-01A-11R-A28H-07 YY1-EVL 1 9 chr14:100262466:+ chr14:100097481:+ FRAMESHIFT NA TCGA-JW-A69B-01A-11R-A32P-07 MYLIP-GMPR 8 34 chr6:16143864:+ chr6:16278785:+ . NA TCGA-JW-A852-01A-11R-A352-07 ILF3-AP1M2 2 5 chr19:10671535:+ chr19:10578963:- INFRAME NA TCGA-JW-AAVH-01A-11R-A38B-07 SASH1-PACRG 5 7 chr6:148390262:+ chr6:163089259:+ FRAMESHIFT NA TCGA-JX-A3PZ-01A-11R-A32Y-07 SH3GLB1-CLCA1 18 48 chr1:86715865:+ chr1:86469021:+ INFRAME NA TCGA-JX-A3Q8-01A-11R-A21T-07 ANKS6-STX17 1 6 chr9:98796133:- chr9:99915178:+ . NA TCGA-JX-A5QV-01A-22R-A28H-07 BCL3-GRIK4 7 14 chr19:44749046:+ chr11:120815378:+ INFRAME NA TCGA-JX-A5QV-01A-22R-A28H-07 SLC2A1-P3H1 5 7 chr1:42943226:- chr1:42762475:- INFRAME NA TCGA-LP-A4AW-01A-11R-A24H-07 RFX2-PATL1 2 1 chr19:6039980:- chr11:59638411:- FRAMESHIFT NA TCGA-LP-A4AX-01A-12R-A24H-07 HEG1-YAP1 1 2 chr3:124990787:- chr11:102186018:+ INFRAME Likely Oncogenic NA TCGA-LP-A5U2-01A-11R-A28H-07 KPNA1-CHRNA9 7 33 chr3:122514757:- chr4:40348882:+ . NA TCGA-LP-A5U3-01A-11R-A28H-07 NCOA3-ARHGAP26 20 63 chr20:47628023:+ chr5:143222358:+ INFRAME NA TCGA-LP-A7HU-01A-11R-A33Z-07 TPX2-COX4I2 17 128 chr20:31739621:+ chr20:31644768:+ . NA TCGA-LP-A7HU-01A-11R-A33Z-07 NCEH1-BCL2L1 4 14 chr3:172710847:- chr20:31666086:- INFRAME NA TCGA-MA-AA3W-01A-11R-A38B-07 SLC22A5-C5orf56 3 42 chr5:132378584:+ chr5:132486557:+ . NA TCGA-MA-AA3W-01A-11R-A38B-07 UQCRC1-IP6K2 3 6 chr3:48605770:- chr3:48729777:- . NA TCGA-MA-AA3X-01A-22R-A42S-07 ETV6-MACROD2 2 7 chr12:11752579:+ chr20:14849904:+ . Likely Oncogenic NA TCGA-MA-AA3Y-01A-11R-A38B-07 HAS3-SNTB2 1 7 chr16:69113542:+ chr16:69260050:+ FRAMESHIFT NA TCGA-MA-AA3Z-01A-11R-A38B-07 NUP62-AP2A1 1 26 chr19:49927694:- chr19:49801390:+ . NA TCGA-MA-AA3Z-01A-11R-A38B-07 CLEC16A-LITAF 1 17 chr16:11061022:+ chr16:11556735:- INFRAME NA TCGA-MA-AA3Z-01A-11R-A38B-07 IL4I1-AP2A1 1 6 chr19:49927694:- chr19:49801390:+ . NA TCGA-MA-AA41-01A-11R-A38B-07 KIAA0907-CD276 4 23 chr1:155917499:- chr15:73709648:+ FRAMESHIFT NA TCGA-MA-AA41-01A-11R-A38B-07 SUMO2-KCTD2 2 23 chr17:75174752:- chr17:75034033:+ . NA TCGA-MA-AA41-01A-11R-A38B-07 MAP2K1-LCE1C 2 3 chr15:66485191:+ chr1:152805498:- . NA TCGA-MA-AA43-01A-11R-A42T-07 MED24-MIEN1 91 1 chr17:40019925:- chr17:39730533:- . NA TCGA-MA-AA43-01A-11R-A42T-07 ADCY2-CASC3 7 8 chr5:7414770:+ chr17:40161753:+ INFRAME NA TCGA-MA-AA43-01A-11R-A42T-07 STK3-LRRC69 3 5 chr8:98526742:- chr8:91218890:+ INFRAME NA TCGA-MA-AA43-01A-11R-A42T-07 CASC3-ADCY2 1 4 chr17:40166861:+ chr5:7414573:+ INFRAME NA TCGA-MU-A5YI-01A-11R-A32P-07 MELK-MS4A12 23 54 chr9:36607673:+ chr11:60497313:+ . NA TCGA-MY-A913-01A-11R-A37O-07 DCUN1D5-WTAPP1 6 49 chr11:103083256:- chr11:102798024:+ . NA TCGA-MY-A913-01A-11R-A37O-07 DYNC2H1-CEP126 1 3 chr11:103358359:+ chr11:101992778:+ FRAMESHIFT NA TCGA-MY-A913-01A-11R-A37O-07 DYNC2H1-MMP1 1 3 chr11:103170290:+ chr11:102795291:- FRAMESHIFT NA TCGA-MY-A913-01A-11R-A37O-07 MMP1-DCUN1D5 1000 1000 chr11:102798066:- chr11:103089306:- INFRAME NA TCGA-PN-A8MA-01A-11R-A36F-07 PLGRKT-JAK2 24 258 chr9:5431897:- chr9:5123004:+ FRAMESHIFT Likely Oncogenic NA TCGA-PN-A8MA-01A-11R-A36F-07 JAK2-RCL1 7 46 chr9:5090911:+ chr9:4834141:+ FRAMESHIFT Likely Oncogenic NA TCGA-Q1-A5R2-01A-11R-A28H-07 ARHGAP35-SAE1 2 20 chr19:46922356:+ chr19:47169818:+ INFRAME NA TCGA-Q1-A5R2-01A-11R-A28H-07 MED23-ANO2 3 14 chr6:131587709:- chr12:5732630:- INFRAME NA TCGA-Q1-A6DT-01A-11R-A32P-07 PATJ-DYNC2H1 55 257 chr1:62017947:+ chr11:103280348:+ FRAMESHIFT NA TCGA-Q1-A6DT-01A-11R-A32P-07 SLC16A10-NME7 24 151 chr6:111177665:+ chr1:169132817:- INFRAME NA TCGA-Q1-A6DT-01A-11R-A32P-07 UBE2V2-MCM4 13 3 chr8:48008470:+ chr8:47967365:+ INFRAME NA TCGA-Q1-A6DW-01A-11R-A32P-07 CADPS2-RPGR 1 7 chr7:122438341:- chrX:38291484:- INFRAME NA TCGA-Q1-A73P-01A-11R-A32P-07 TTLL10-CTAG2 7 37 chr1:1185109:+ chrX:154652267:- FRAMESHIFT NA TCGA-Q1-A73R-01A-11R-A33Z-07 ERBB2-PPP1R1B 4508 19965 chr17:39727547:+ chr17:39635607:+ INFRAME NA TCGA-Q1-A73R-01A-11R-A33Z-07 PGAP3-PNMT 1 33 chr17:39687834:- chr17:39669629:+ INFRAME NA TCGA-Q1-A73S-01A-11R-A33Z-07 ZNF395-PBK 1 4 chr8:28385080:- chr8:27811134:- . NA TCGA-R2-A69V-01A-11R-A32P-07 TCEA1-MTSS1 1 3 chr8:53993668:- chr8:124704191:- FRAMESHIFT NA TCGA-R2-A69V-01A-11R-A32P-07 ANKLE2-POLE 1 1 chr12:132747832:- chr12:132632795:- FRAMESHIFT NA TCGA-RA-A741-01A-11R-A33Z-07 KDM2A-PGA3 7 8 chr11:67256289:+ chr11:61208398:+ . NA TCGA-RA-A741-01A-11R-A33Z-07 YAP1-SS18 3 5 chr11:102111169:+ chr18:26087577:- INFRAME Likely Oncogenic NA TCGA-RA-A741-01A-11R-A33Z-07 OSBPL1A-MRPL11 1 3 chr18:24271622:- chr11:66438259:- . NA TCGA-UC-A7PD-01A-11R-A352-07 AGRN-BAD 22 101 chr1:1022462:+ chr11:64271803:- INFRAME NA TCGA-UC-A7PF-01A-11R-A352-07 RALY-SLC24A3 2 13 chr20:33994131:+ chr20:19580000:+ . NA TCGA-UC-A7PG-01A-11R-A42S-07 SLC1A5-AP2A1 3 4 chr19:46782383:- chr19:49781757:+ FRAMESHIFT NA TCGA-VS-A8EC-01A-11R-A36F-07 CSNK1E-PLA2G6 9 26 chr22:38293255:- chr22:38116211:- . NA TCGA-VS-A8EC-01A-11R-A36F-07 SHISA5-IP6K2 9 25 chr3:48501137:- chr3:48695418:- INFRAME NA TCGA-VS-A8EC-01A-11R-A36F-07 CYP20A1-CCDC178 7 16 chr2:203252109:+ chr18:33215695:- INFRAME NA TCGA-VS-A8EC-01A-11R-A36F-07 CDC42EP2-MRPL49 6 17 chr11:65314954:+ chr11:65125488:+ . NA TCGA-VS-A8EC-01A-11R-A36F-07 RFC1-EHBP1 2 6 chr4:39342345:- chr2:62942718:+ FRAMESHIFT NA TCGA-VS-A8EC-01A-11R-A36F-07 BCL3-CEACAM16 2 4 chr19:44756340:+ chr19:44701361:+ . NA TCGA-VS-A8EC-01A-11R-A36F-07 TTC7B-CCDC88C 2 3 chr14:90780738:- chr14:91416838:- FRAMESHIFT NA TCGA-VS-A8EC-01A-11R-A36F-07 ZFHX3-IL34 1 6 chr16:72950469:- chr16:70646548:+ . NA TCGA-VS-A8EC-01A-11R-A36F-07 WDPCP-SERTAD2 1 2 chr2:63437421:- chr2:64636875:- . NA TCGA-VS-A8EH-01A-11R-A36F-07 RAB30-AQP11 6 34 chr11:83071691:- chr11:77603556:+ . NA TCGA-VS-A8EI-01A-11R-A37O-07 SGO2-AOX3P 9 55 chr2:200542664:+ chr2:200699931:+ . NA TCGA-VS-A8EI-01A-11R-A37O-07 NDUFS4-GZMA 1 15 chr5:53658624:+ chr5:55105474:+ INFRAME NA TCGA-VS-A8EI-01A-11R-A37O-07 KCNC3-PRKDC 3 3 chr19:50320593:- chr8:47817561:- INFRAME NA TCGA-VS-A8EI-01A-11R-A37O-07 ITGA2-PARP8 2 5 chr5:52989532:+ chr5:50759643:+ INFRAME NA TCGA-VS-A8EJ-01A-11R-A37O-07 MED13-BAHCC1 65 265 chr17:62065140:- chr17:81463611:+ INFRAME NA TCGA-VS-A8EJ-01A-11R-A37O-07 SSH2-RUNDC3A 25 69 chr17:29695459:- chr17:44316385:+ FRAMESHIFT NA TCGA-VS-A8EJ-01A-11R-A37O-07 SMURF2P1-SSH2 17 33 chr17:30600916:+ chr17:29703062:- . NA TCGA-VS-A8EJ-01A-11R-A37O-07 TRIM37-MED13 6 73 chr17:59070823:- chr17:62052705:- FRAMESHIFT NA TCGA-VS-A8EJ-01A-11R-A37O-07 PITPNC1-SKAP1 10 32 chr17:67378202:+ chr17:48170659:- FRAMESHIFT NA TCGA-VS-A8EJ-01A-11R-A37O-07 ACBD4-LRRC37A 9 12 chr17:45139160:+ chr17:46335545:+ INFRAME NA TCGA-VS-A8EJ-01A-11R-A37O-07 SUZ12P1-C17orf64 4 20 chr17:30709811:+ chr17:60425783:+ . NA TCGA-VS-A8EJ-01A-11R-A37O-07 KIAA0100-CRHR1 5 9 chr17:28643610:- chr17:45807010:+ FRAMESHIFT NA TCGA-VS-A8EJ-01A-11R-A37O-07 EEFSEC-PPP2R3A 2 3 chr3:128264781:+ chr3:136145043:+ FRAMESHIFT NA TCGA-VS-A8EJ-01A-11R-A37O-07 C17orf67-CUEDC1 1 6 chr17:56814869:- chr17:57885879:- . NA TCGA-VS-A8EJ-01A-11R-A37O-07 ELMSAN1-ZFYVE1 1 6 chr14:73759763:- chr14:72998315:- . NA TCGA-VS-A8EJ-01A-11R-A37O-07 MYO18A-RARA 1 5 chr17:29180313:- chr17:40348316:+ . NA TCGA-VS-A8EJ-01A-11R-A37O-07 MYO1D-PLXDC1 1 2 chr17:32653843:- chr17:39067959:- INFRAME NA TCGA-VS-A8EL-01A-11R-A37O-07 TRPV4-GIT2 1 1 chr12:109833350:- chr12:109961685:- . NA TCGA-VS-A8Q8-01A-11R-A37O-07 PLAUR-SMG9 10 30 chr19:43667581:- chr19:43750747:- . NA TCGA-VS-A8Q9-01A-12R-A37O-07 LDLR-CALR 17 29 chr19:11116998:+ chr19:12939134:+ FRAMESHIFT NA TCGA-VS-A8Q9-01A-12R-A37O-07 ZNF700-TEX101 6 47 chr19:11925273:+ chr19:43415881:+ INFRAME NA TCGA-VS-A8Q9-01A-12R-A37O-07 HOOK2-GADD45GIP1 5 25 chr19:12792324:- chr19:12954526:- . NA TCGA-VS-A8Q9-01A-12R-A37O-07 CALR-ZNF799 3 19 chr19:12940887:+ chr19:12393423:- INFRAME NA TCGA-VS-A8Q9-01A-12R-A37O-07 PPP5C-GADD45GIP1 2 9 chr19:46376574:+ chr19:12954526:- FRAMESHIFT NA TCGA-VS-A8QC-01A-11R-A37O-07 PTPN13-C4orf36 94 197 chr4:86735746:+ chr4:86876443:- . NA TCGA-VS-A8QC-01A-11R-A37O-07 FBXO42-EPHA2 13 18 chr1:16305803:- chr1:16125320:- FRAMESHIFT NA TCGA-VS-A8QC-01A-11R-A37O-07 ABCA5-MBTD1 5 10 chr17:69294655:- chr17:51180694:- INFRAME NA TCGA-VS-A8QC-01A-11R-A37O-07 MCM3-PKHD1 4 2 chr6:52283294:- chr6:52053251:- INFRAME NA TCGA-VS-A8QF-01A-21R-A37O-07 RHBDL2-AHCYL2 6 42 chr1:38941682:- chr7:129422840:+ . NA TCGA-VS-A8QF-01A-21R-A37O-07 HSPA14-C10orf67 3 15 chr10:14849811:+ chr10:23204255:- FRAMESHIFT NA TCGA-VS-A8QF-01A-21R-A37O-07 THSD4-REC114 2 14 chr15:71411823:+ chr15:73550938:+ INFRAME NA TCGA-VS-A8QF-01A-21R-A37O-07 TBCA-WDR41 2 5 chr5:77708242:- chr5:77540536:- . NA TCGA-VS-A94W-01A-12R-A37O-07 SPIDR-DNAJC5B 4 9 chr8:47294030:+ chr8:66043488:+ . NA TCGA-VS-A94X-01A-11R-A38B-07 PSKH1-TSNAXIP1 1 22 chr16:67909706:+ chr16:67821099:+ INFRAME NA TCGA-VS-A94Y-01A-11R-A38B-07 GNS-TBC1D30 40 249 chr12:64744809:- chr12:64818456:+ . NA TCGA-VS-A94Y-01A-11R-A38B-07 WDR35-HS1BP3 3 2 chr2:19951744:- chr2:20634973:- . NA TCGA-VS-A94Y-01A-11R-A38B-07 CHEK2-LARGE1 1 1 chr22:28694032:- chr22:33650668:- FRAMESHIFT NA TCGA-VS-A950-01A-11R-A42T-07 PI4KB-SELENBP1 40 215 chr1:151315573:- chr1:151372698:- . NA TCGA-VS-A952-01A-11R-A38B-07 MTA2-UBXN1 9 27 chr11:62597316:- chr11:62678952:- . NA TCGA-VS-A953-01A-11R-A38B-07 ELMSAN1-NUMB 29 93 chr14:73736998:- chr14:73459305:- . NA TCGA-VS-A953-01A-11R-A38B-07 EXOC6B-PCCB 17 35 chr2:72825798:- chr3:136326803:+ FRAMESHIFT NA TCGA-VS-A953-01A-11R-A38B-07 CDH13-TXNDC11 2 69 chr16:82627137:+ chr16:11692082:- INFRAME NA TCGA-VS-A953-01A-11R-A38B-07 TRADD-SMOX 3 4 chr16:67154456:- chr20:4120980:+ . NA TCGA-VS-A957-01A-11R-A42T-07 SRGAP2-KCNJ10 1 2 chr1:206437042:+ chr1:160042532:- FRAMESHIFT NA TCGA-VS-A959-01A-11R-A42T-07 UBE3C-C1D 5 27 chr7:157184029:+ chr2:68047319:- INFRAME NA TCGA-VS-A959-01A-11R-A42T-07 PSKH1-PSMB10 3 9 chr16:67927764:+ chr16:67935437:- . NA TCGA-VS-A9U5-01A-11R-A42T-07 BCL7A-WDR66 2 2 chr12:122044053:+ chr12:122003652:+ INFRAME NA TCGA-VS-A9U7-01A-11R-A42T-07 FCHSD1-NCKAP1L 39 110 chr5:141650359:- chr12:54542575:+ INFRAME NA TCGA-VS-A9U7-01A-11R-A42T-07 RLN2-CD274 1 3 chr9:5304370:- chr9:5462834:+ INFRAME NA TCGA-VS-A9UB-01A-22R-A42T-07 OAS1-RPH3A 2 8 chr12:112911235:+ chr12:112869759:+ FRAMESHIFT NA TCGA-VS-A9UH-01A-11R-A42T-07 SLC35G2-IL20RB 1 6 chr3:136819628:+ chr3:136980466:+ . NA TCGA-VS-A9UH-01A-11R-A42T-07 COL1A2-HSPA8 1 1 chr7:94429430:+ chr11:123061258:- INFRAME NA TCGA-VS-A9UO-01A-11R-A42T-07 MMP12-WTAPP1 162 722 chr11:102866315:- chr11:102830732:+ . NA TCGA-VS-A9UO-01A-11R-A42T-07 BTBD1-BBOX1 80 210 chr15:83041728:- chr11:27093168:+ INFRAME NA TCGA-VS-A9UO-01A-11R-A42T-07 WTAPP1-MMP12 9 29 chr11:102832906:+ chr11:102868069:- . NA TCGA-VS-A9UO-01A-11R-A42T-07 SRGAP3-ITPR1 4 10 chr3:8990512:- chr3:4766530:+ INFRAME NA TCGA-VS-A9UO-01A-11R-A42T-07 FANCM-PRPF39 4 7 chr14:45196547:+ chr14:45107451:+ FRAMESHIFT NA TCGA-VS-A9UO-01A-11R-A42T-07 SNRNP40-COL6A5 1 6 chr1:31281374:- chr3:130468795:+ FRAMESHIFT NA TCGA-VS-A9UP-01A-11R-A42T-07 STAT3-KAT2A 28 170 chr17:42348389:- chr17:42120829:- FRAMESHIFT NA TCGA-VS-A9UP-01A-11R-A42T-07 PQLC1-RBFADN 7 19 chr18:79950724:- chr18:80079687:+ . NA TCGA-VS-A9UP-01A-11R-A42T-07 PSMA6-SNX6 1 26 chr14:35292552:+ chr14:34603471:- FRAMESHIFT NA TCGA-VS-A9UP-01A-11R-A42T-07 MMD-APPBP2 5 6 chr17:55421670:- chr17:60466459:- INFRAME NA TCGA-VS-A9UP-01A-11R-A42T-07 ZDHHC18-ARID1A 2 13 chr1:26827139:+ chr1:26772500:+ FRAMESHIFT Likely Oncogenic NA TCGA-VS-A9UP-01A-11R-A42T-07 TPX2-DEFB118 2 8 chr20:31739621:+ chr20:31372857:+ . NA TCGA-VS-A9UT-01A-11R-A42T-07 FBXW11-KCNIP1 31 85 chr5:172006458:- chr5:170718758:+ FRAMESHIFT NA TCGA-VS-A9UT-01A-11R-A42T-07 PPP1R15A-EMP3 10 77 chr19:48874898:+ chr19:48321814:+ . NA TCGA-VS-A9UT-01A-11R-A42T-07 RFX3-DDAH2 11 34 chr9:3525747:- chr6:31728745:- . NA TCGA-VS-A9UT-01A-11R-A42T-07 SBSPON-IGHGP 12 0 chr8:73081163:- chr14:105668321:- . NA TCGA-VS-A9UT-01A-11R-A42T-07 SNTA1-PXMP4 4 6 chr20:33438841:- chr20:33714736:- FRAMESHIFT NA TCGA-VS-A9UT-01A-11R-A42T-07 C16orf59-CCNF 3 9 chr16:2462475:+ chr16:2458157:+ . NA TCGA-VS-A9UT-01A-11R-A42T-07 DDX6-SLC37A4 4 3 chr11:118779632:- chr11:119029564:- . NA TCGA-VS-A9UT-01A-11R-A42T-07 SEC16A-MCRIP1 3 6 chr9:136471975:- chr17:81824554:- FRAMESHIFT NA TCGA-VS-A9UT-01A-11R-A42T-07 UBE2Q2P2-ZSCAN2 1 11 chr15:82404751:+ chr15:84603820:+ . NA TCGA-VS-A9UT-01A-11R-A42T-07 PPP2R1A-SMIM17 1 6 chr19:52190174:+ chr19:56645568:+ . NA TCGA-VS-A9UV-01A-11R-A42T-07 DTX3L-FAM162A 5 7 chr3:122570672:+ chr3:122407281:+ INFRAME NA TCGA-VS-A9V0-01A-11R-A42T-07 PLXNB2-ST3GAL1 40 122 chr22:50280005:- chr8:133499189:- . NA TCGA-VS-A9V0-01A-11R-A42T-07 OGFOD3-EIF1 21 29 chr17:82411455:- chr17:41690782:+ INFRAME NA TCGA-VS-A9V0-01A-11R-A42T-07 FOXK2-AMBRA1 5 18 chr17:82520307:+ chr11:46397943:- FRAMESHIFT NA TCGA-VS-A9V0-01A-11R-A42T-07 FOXK2-CHRM4 5 2 chr17:82520307:+ chr11:46386586:- . NA TCGA-VS-A9V0-01A-11R-A42T-07 NFIC-TLE6 1 17 chr19:3382243:+ chr19:2980100:+ FRAMESHIFT NA TCGA-VS-A9V0-01A-11R-A42T-07 BORCS8-TM6SF2 3 6 chr19:19192081:- chr19:19268087:- FRAMESHIFT NA TCGA-VS-A9V0-01A-11R-A42T-07 SLC9A3R1-RAB37 2 10 chr17:74763520:+ chr17:74729256:+ FRAMESHIFT NA TCGA-VS-A9V0-01A-11R-A42T-07 S100P-BZW2 3 1 chr4:6694070:+ chr7:16674412:+ FRAMESHIFT NA TCGA-VS-A9V0-01A-11R-A42T-07 PREP-HOTAIRM1 2 3 chr6:105397853:- chr7:27099779:+ . NA TCGA-VS-A9V0-01A-11R-A42T-07 PIK3R3-MOB3C 2 1 chr1:46077515:- chr1:46613371:- FRAMESHIFT Likely Oncogenic NA TCGA-VS-A9V0-01A-11R-A42T-07 FBLIM1-DNAH14 1 4 chr1:15774796:+ chr1:225231073:+ FRAMESHIFT NA TCGA-VS-A9V0-01A-11R-A42T-07 NCALD-UBR5 1 3 chr8:102020237:- chr8:102305295:- . NA TCGA-VS-A9V1-01A-11R-A42T-07 PTBP3-GDF15 4 17 chr9:112297832:- chr19:18382313:+ . NA TCGA-VS-A9V5-01A-11R-A42T-07 SYNGR2-TMC8 2 1 chr17:78168715:+ chr17:78134394:+ INFRAME NA TCGA-ZJ-A8QO-01A-11R-A37O-07 ABCA1-PTGR1 17 44 chr9:104903614:- chr9:111597432:- . NA TCGA-ZJ-A8QO-01A-11R-A37O-07 HNRNPD-SCD5 2 5 chr4:82373446:- chr4:82705413:- FRAMESHIFT NA TCGA-ZJ-A8QR-01A-11R-A37O-07 RAB11A-PPP6R3 31 151 chr15:65869625:+ chr11:68609904:+ FRAMESHIFT NA TCGA-ZJ-A8QR-01A-11R-A37O-07 GNL3L-XAGE3 1 3 chrX:54530419:+ chrX:52867141:- . NA TCGA-ZJ-AAX4-01A-11R-A42T-07 BRWD3-LRCH2 2 9 chrX:80808539:- chrX:115156667:- FRAMESHIFT NA TCGA-ZJ-AAX4-01A-11R-A42T-07 PHKA2-FBXO36 1 7 chrX:18905758:- chr2:229976241:+ FRAMESHIFT NA TCGA-ZJ-AAX8-01A-11R-A42T-07 THADA-GACAT3 3 7 chr2:43286908:- chr2:16080898:+ . NA TCGA-ZJ-AAXB-01A-11R-A42T-07 SIK2-C11orf53 4 26 chr11:111620402:+ chr11:111281398:+ FRAMESHIFT NA TCGA-ZJ-AAXB-01A-11R-A42T-07 GALNT11-CNTNAP2 1 4 chr7:152025884:+ chr7:147562138:+ . NA TCGA-ZJ-AAXB-01A-11R-A42T-07 FOXP1-UBA3 1 2 chr3:71493426:- chr3:69080153:- . Likely Oncogenic NA TCGA-ZJ-AAXN-01A-11R-A42T-07 CCDC24-ST3GAL3 1 3 chr1:43993964:+ chr1:43824731:+ INFRAME NA TCGA-ZJ-AAXN-01A-11R-A42T-07 ACTR3-VPS13B 1 2 chr2:113890323:+ chr8:99575658:+ INFRAME NA TCGA-ZJ-AB0I-01A-11R-A42T-07 MSH2-CCDC57 9 9 chr2:47410372:+ chr17:82163357:- FRAMESHIFT Likely Oncogenic NA TCGA-ZJ-AB0I-01A-11R-A42T-07 GNL1-SOCS1 4 13 chr6:30552467:- chr16:11255528:- . NA TCGA-ZJ-AB0I-01A-11R-A42T-07 TULP4-SPSB4 1 17 chr6:158314268:+ chr3:141147142:+ FRAMESHIFT NA TCGA-ZJ-AB0I-01A-11R-A42T-07 FAM160A1-ADAM2 1 5 chr4:151409465:+ chr8:39769575:- . NA TCGA-3X-AAVA-01A-11R-A41I-07 MUM1-EFNA2 3 5 chr19:1367220:+ chr19:1299824:+ FRAMESHIFT NA TCGA-3X-AAVA-01A-11R-A41I-07 PTPRF-MICALL2 1 8 chr1:43578920:+ chr7:1428791:- . NA TCGA-3X-AAVA-01A-11R-A41I-07 SMURF2-DHX37 1 4 chr17:64661829:- chr12:124960423:- FRAMESHIFT NA TCGA-3X-AAVB-01A-31R-A41I-07 TRIB3-SLC24A3 1 15 chr20:391579:+ chr20:19515488:+ FRAMESHIFT NA TCGA-3X-AAVC-01A-21R-A41I-07 PAFAH1B2-MRPL2 9 22 chr11:117144418:+ chr6:43058233:- INFRAME NA TCGA-3X-AAVC-01A-21R-A41I-07 ZNF311-TTBK1 3 18 chr6:28998734:- chr6:43269643:+ FRAMESHIFT NA TCGA-3X-AAVC-01A-21R-A41I-07 MED20-C6orf132 1 3 chr6:41909345:- chr6:42107583:- FRAMESHIFT NA TCGA-3X-AAVE-01A-11R-A41I-07 PHLDB2-TMPRSS7 6 26 chr3:111732703:+ chr3:112038072:+ . NA TCGA-3X-AAVE-01A-11R-A41I-07 PLCXD2-TMPRSS7 6 26 chr3:111732703:+ chr3:112038072:+ . NA TCGA-3X-AAVE-01A-11R-A41I-07 ACSS1-CDH4 2 3 chr20:25048085:- chr20:61743563:+ FRAMESHIFT NA TCGA-3X-AAVE-01A-11R-A41I-07 CUL4A-TMCO3 1 3 chr13:113210088:+ chr13:113534045:+ FRAMESHIFT NA TCGA-3X-AAVE-01A-11R-A41I-07 SEPHS1-PTER 1 1 chr10:13344758:- chr10:16505020:+ FRAMESHIFT NA TCGA-4G-AAZO-01A-12R-A41I-07 RASAL2-COPA 9 22 chr1:178300118:+ chr1:160340294:- INFRAME NA TCGA-4G-AAZO-01A-12R-A41I-07 CLASP1-FBXO11 1 4 chr2:121605701:- chr2:47820456:- FRAMESHIFT NA TCGA-W5-AA2I-01A-32R-A41I-07 SMG1P3-MFSD13B 6 8 chr16:21519828:- chr16:22402692:+ . NA TCGA-W5-AA2T-01A-12R-A41I-07 NR3C2-SPATA17 4 20 chr4:148435104:- chr1:217862774:+ FRAMESHIFT NA TCGA-W5-AA2U-01A-11R-A41I-07 NCOA4-RSU1 13 56 chr10:46030526:- chr10:16593496:- . NA TCGA-W5-AA2U-01A-11R-A41I-07 RSU1-LARP4B 7 8 chr10:16816973:- chr10:817889:- FRAMESHIFT NA TCGA-W5-AA2U-01A-11R-A41I-07 PHF20-CEP250 8 2 chr20:35772079:+ chr20:35508943:+ . NA TCGA-W5-AA2U-01A-11R-A41I-07 OLA1-CAB39 4 17 chr2:174123180:- chr2:230798729:+ INFRAME NA TCGA-W5-AA2U-01A-11R-A41I-07 HOXC6-KBTBD12 4 7 chr12:54017414:+ chr3:127963189:+ . NA TCGA-W5-AA2U-01A-11R-A41I-07 HOXC4-KBTBD12 4 6 chr12:54017414:+ chr3:127963189:+ . NA TCGA-W5-AA2X-01A-11R-A41I-07 SLC29A2-RAB6A 19 107 chr11:66365936:- chr11:73679720:- INFRAME NA TCGA-W5-AA2X-01A-11R-A41I-07 SHANK2-SPCS2 13 4 chr11:70659828:- chr11:74976857:+ FRAMESHIFT NA TCGA-W5-AA2X-01A-11R-A41I-07 ZNF780A-NADSYN1 6 30 chr19:40090906:- chr11:71490845:+ . NA TCGA-W5-AA2X-01A-11R-A41I-07 SRGAP1-TBC1D30 6 12 chr12:64017012:+ chr12:64864668:+ INFRAME NA TCGA-W5-AA2X-01A-11R-A41I-07 RAB3IP-BEST3 3 23 chr12:69784815:+ chr12:69678893:- FRAMESHIFT NA TCGA-W5-AA2X-01A-11R-A41I-07 KDM2A-RBM14 6 6 chr11:67121358:+ chr11:66624214:+ INFRAME NA TCGA-W5-AA2X-01A-11R-A41I-07 UVRAG-SHANK2 2 8 chr11:75912039:+ chr11:70807171:- INFRAME NA TCGA-W5-AA2X-01A-11R-A41I-07 SRGAP1-OS9 2 4 chr12:63844883:+ chr12:57715760:+ FRAMESHIFT NA TCGA-W5-AA2X-01A-11R-A41I-07 RBM14-KDM2A 1 5 chr11:66625678:+ chr11:67180079:+ FRAMESHIFT NA TCGA-W5-AA2Z-01A-11R-A41I-07 VPS13D-VEGFC 4 11 chr1:12293704:+ chr4:176729746:- INFRAME NA TCGA-W5-AA30-01A-31R-A41I-07 BAZ2B-PLA2R1 1 4 chr2:159555823:- chr2:160028963:- . NA TCGA-W5-AA30-01A-31R-A41I-07 RILPL2-SBNO1 1 3 chr12:123430508:- chr12:123298171:- INFRAME NA TCGA-W5-AA31-01A-11R-A41I-07 SPNS2-PSMD11 22 81 chr17:4525193:+ chr17:32477521:+ INFRAME NA TCGA-W5-AA31-01A-11R-A41I-07 PSMD11-CCL15 15 79 chr17:32454619:+ chr17:35998391:- FRAMESHIFT NA TCGA-W5-AA31-01A-11R-A41I-07 TAOK1-NCOR1 13 47 chr17:29510992:+ chr17:16080727:- INFRAME Likely Oncogenic NA TCGA-W5-AA31-01A-11R-A41I-07 CCL14-MYH10 6 24 chr17:35986571:- chr17:8623497:- . NA TCGA-W5-AA31-01A-11R-A41I-07 SLFN13-ARHGAP44 9 4 chr17:35448722:- chr17:12952501:+ . NA TCGA-W5-AA31-01A-11R-A41I-07 INPP5K-RPA1 3 23 chr17:1513872:- chr17:1842803:+ FRAMESHIFT NA TCGA-W5-AA31-01A-11R-A41I-07 SYNRG-PIK3R5 5 15 chr17:37579132:- chr17:8905737:- . NA TCGA-W5-AA31-01A-11R-A41I-07 RPA1-WDR81 3 22 chr17:1853189:+ chr17:1730380:+ INFRAME NA TCGA-W5-AA31-01A-11R-A41I-07 ELAC2-RABEP1 3 20 chr17:13010613:- chr17:5308694:+ FRAMESHIFT NA TCGA-W5-AA31-01A-11R-A41I-07 PITPNM3-P2RX5 2 24 chr17:6468225:- chr17:3691794:- FRAMESHIFT NA TCGA-W5-AA31-01A-11R-A41I-07 NCOR1-HIC1 4 13 chr17:16070165:- chr17:2056671:+ INFRAME Likely Oncogenic NA TCGA-W5-AA31-01A-11R-A41I-07 SMURF2P1-DHRS7B 3 6 chr17:30600916:+ chr17:21178233:+ . NA TCGA-W5-AA31-01A-11R-A41I-07 TTC19-MMP28 1 13 chr17:16000245:+ chr17:35756419:- FRAMESHIFT NA TCGA-W5-AA31-01A-11R-A41I-07 GLOD4-EIF5A 2 7 chr17:769869:- chr17:7309615:+ INFRAME NA TCGA-W5-AA31-01A-11R-A41I-07 MYO1D-HNF1B 1 10 chr17:32721023:- chr17:37705049:- FRAMESHIFT NA TCGA-W5-AA34-01A-11R-A41I-07 LPAR1-AGO3 1 5 chr9:110941421:- chr1:36034174:+ INFRAME NA TCGA-W5-AA36-01A-11R-A41I-07 KDM4A-OPRD1 3 0 chr1:43655766:+ chr1:28858954:+ INFRAME NA TCGA-W5-AA39-01A-11R-A41I-07 IL1RAP-SIRPG 3 10 chr3:190629498:+ chr20:1649408:- INFRAME NA TCGA-W5-AA39-01A-11R-A41I-07 KIAA1671-NF2 2 13 chr22:25112462:+ chr22:29636751:+ INFRAME Likely Oncogenic NA TCGA-W6-AA0S-01A-11R-A41I-07 AJUBA-CEP192 12 35 chr14:22976645:- chr18:13087017:+ INFRAME NA TCGA-W6-AA0S-01A-11R-A41I-07 NRAS-CLDN14 3 23 chr1:114716050:- chr21:36461776:- . NA TCGA-W6-AA0S-01A-11R-A41I-07 CCDC26-GSDMC 3 7 chr8:129679928:- chr8:129760589:- . NA TCGA-WD-A7RX-01A-12R-A41I-07 FOXP1-SH3RF2 4 5 chr3:71041328:- chr5:146000058:+ FRAMESHIFT Likely Oncogenic NA TCGA-YR-A95A-01A-12R-A41I-07 CCNC-FAM201A 6 14 chr6:99568496:- chr9:38621832:+ . NA TCGA-YR-A95A-01A-12R-A41I-07 SYT7-FADS3 6 12 chr11:61551384:- chr11:61878847:- FRAMESHIFT NA TCGA-YR-A95A-01A-12R-A41I-07 ARHGAP35-SLC1A5 5 9 chr19:46989675:+ chr19:46778908:- FRAMESHIFT NA TCGA-ZH-A8Y1-01A-11R-A41I-07 PTPRK-SMNDC1 43 205 chr6:128240035:- chr10:110298790:- INFRAME NA TCGA-ZH-A8Y1-01A-11R-A41I-07 FRK-BEND3 2 2 chr6:116059968:- chr6:107099296:- . NA TCGA-ZH-A8Y2-01A-11R-A41I-07 ANAPC1P1-C2orf76 10 47 chr2:86874055:+ chr2:119340361:- . NA TCGA-ZH-A8Y2-01A-11R-A41I-07 C2orf76-ANKRD46 1 17 chr2:119366790:- chr8:100529860:- . NA TCGA-ZH-A8Y4-01A-11R-A41I-07 CASC3-THRA 6 58 chr17:40168417:+ chr17:40093020:+ INFRAME NA TCGA-ZH-A8Y4-01A-11R-A41I-07 SHROOM4-AR 2 5 chrX:50695786:- chrX:67686010:+ INFRAME NA TCGA-ZH-A8Y6-01A-11R-A41I-07 NIPBL-NACC1 24 86 chr5:36972041:+ chr19:13135200:+ . NA TCGA-ZH-A8Y8-01A-51R-A41I-07 PTPRS-TPM4 1 16 chr19:5265008:- chr19:16088027:+ FRAMESHIFT NA TCGA-ZU-A8S4-01A-11R-A41I-07 IL6ST-ZNF706 3 8 chr5:55994784:- chr8:101201743:- . NA TCGA-3L-AA1B-01A-11R-A37K-07 HOXD11-NOC4L 1 2 chr2:176104626:+ chr12:132150981:+ . NA TCGA-4N-A93T-01A-11R-A37K-07 ANKRD29-NPC1 1 5 chr18:23629853:- chr18:23522906:- INFRAME NA TCGA-4T-AA8H-01A-11R-A41B-07 ZDHHC3-KIF15 10 30 chr3:44945168:- chr3:44873329:+ . NA TCGA-4T-AA8H-01A-11R-A41B-07 CHD7-TOX 4 34 chr8:60743097:+ chr8:58960008:- INFRAME NA TCGA-5M-AAT4-01A-11R-A41B-07 KIAA0907-RPS15A 3 14 chr1:155914213:- chr16:18790337:- . NA TCGA-5M-AAT4-01A-11R-A41B-07 RBCK1-CLCN7 2 3 chr20:419731:+ chr16:1459187:- INFRAME NA TCGA-5M-AAT6-01A-11R-A41B-07 EYA3-GUCA1C 3 9 chr1:28088524:- chr3:108920585:- . NA TCGA-5M-AATA-01A-31R-A41B-07 CRLS1-TRMT6 3 21 chr20:6023422:+ chr20:5944914:- . NA TCGA-A6-2675-01A-02R-1723-07 YWHAB-BCL2L1 5 32 chr20:44885886:+ chr20:31722330:- . NA TCGA-A6-2675-01A-02R-1723-07 TM9SF4-COMMD7 2 23 chr20:32161365:+ chr20:32728142:- INFRAME NA TCGA-A6-2675-01A-02R-1723-07 RRBP1-SNTA1 2 13 chr20:17658596:- chr20:33439026:- INFRAME NA TCGA-A6-2675-01A-02R-1723-07 RALGAPB-ITCH 2 4 chr20:38570847:+ chr20:34412515:+ INFRAME NA TCGA-A6-2686-01A-01R-A32Z-07 ABR-YWHAE 2 6 chr17:1228793:- chr17:1365058:- . NA TCGA-A6-5657-01A-01R-A32Z-07 EIF4ENIF1-COMT 22 59 chr22:31471844:- chr22:19961199:+ . NA TCGA-A6-5657-01A-01R-A32Z-07 TTLL6-WRAP53 6 67 chr17:48815839:- chr17:7687377:+ . NA TCGA-A6-5657-01A-01R-A32Z-07 KIAA1671-CHEK2 2 7 chr22:25112462:+ chr22:28734727:- INFRAME NA TCGA-A6-5657-01A-01R-A32Z-07 KIAA1671-EIF4ENIF1 2 7 chr22:25014566:+ chr22:31437818:- . NA TCGA-A6-5657-01A-01R-A32Z-07 PISD-MED15 3 2 chr22:31630804:- chr22:20537117:+ . NA TCGA-A6-5657-01A-01R-A32Z-07 BCR-ARVCF 2 3 chr22:23273774:+ chr22:19982091:- INFRAME NA TCGA-A6-5657-01A-01R-A32Z-07 KIAA1671-CRKL 1 6 chr22:25029540:+ chr22:20949711:+ FRAMESHIFT NA TCGA-A6-5657-01A-01R-A32Z-07 MYO1D-PIGS 1 5 chr17:32876778:- chr17:28570963:- FRAMESHIFT NA TCGA-A6-5657-01A-01R-A32Z-07 SNAP29-SFI1 1 4 chr22:20870533:+ chr22:31616745:+ FRAMESHIFT NA TCGA-A6-5657-01A-01R-A32Z-07 USP32-LRRC37A2 1 2 chr17:60294683:- chr17:46553400:+ INFRAME NA TCGA-A6-5660-01A-01R-1653-07 ZMPSTE24-TMCO2 52 245 chr1:40268535:+ chr1:40251283:+ INFRAME NA TCGA-A6-5660-01A-01R-1653-07 LAMA5-RNF114 9 54 chr20:62362400:- chr20:49941561:+ FRAMESHIFT NA TCGA-A6-5660-01A-01R-1653-07 KMT2E-TUFT1 5 17 chr7:105107925:+ chr1:151569657:+ INFRAME NA TCGA-A6-5660-01A-01R-1653-07 RALY-SLC24A3 1 22 chr20:34078553:+ chr20:19717528:+ . NA TCGA-A6-5660-01A-01R-1653-07 TUFT1-KMT2E 3 3 chr1:151566228:+ chr7:105108942:+ INFRAME NA TCGA-A6-5661-01A-01R-1653-07 SESTD1-CCDC141 1 3 chr2:179264499:- chr2:178961483:- . NA TCGA-A6-5664-01A-21R-1839-07 PITPNM2-PGD 2 8 chr12:123110385:- chr1:10399629:+ . NA TCGA-A6-5664-01A-21R-1839-07 ZMYM4-BSDC1 1 9 chr1:35325405:+ chr1:32386895:- FRAMESHIFT NA TCGA-A6-5664-01A-21R-1839-07 BSDC1-ZMYM4 1 8 chr1:32394080:- chr1:35358925:+ INFRAME NA TCGA-A6-5664-01A-21R-1839-07 SMIM1-FAAP20 1 7 chr1:3773181:+ chr1:2201225:- . NA TCGA-A6-5664-01A-21R-1839-07 KIF1B-RERE 1 3 chr1:10375373:+ chr1:8557523:- FRAMESHIFT NA TCGA-A6-5666-01A-01R-1653-07 LYN-VPS13B 3 6 chr8:55880103:+ chr8:99501687:+ . NA TCGA-A6-5667-01A-21R-1723-07 FOXN3-CDKL1 15 43 chr14:89411934:- chr14:50330181:- INFRAME NA TCGA-A6-5667-01A-21R-1723-07 BAIAP2L1-DMTF1 12 14 chr7:98400802:- chr7:87170995:+ FRAMESHIFT NA TCGA-A6-5667-01A-21R-1723-07 TTI1-EFCAB8 15 1 chr20:38033404:- chr20:32958421:+ . NA TCGA-A6-6137-01A-11R-1774-07 ZBTB20-DPYSL2 2 9 chr3:114693528:- chr8:26634780:+ . NA TCGA-A6-6648-01A-11R-1774-07 AHCY-RPLP1 1 1 chr20:34295395:- chr15:69453647:+ INFRAME NA TCGA-A6-6648-01A-11R-1774-07 CHD1-RGMB 1 1 chr5:98868495:- chr5:98793085:+ INFRAME NA TCGA-A6-6653-01A-11R-1774-07 ETV6-APOLD1 2 21 chr12:11650160:+ chr12:12812261:+ . Likely Oncogenic NA TCGA-A6-6653-01A-11R-1774-07 SNX13-PHF14 1 1 chr7:17940284:- chr7:11111350:+ FRAMESHIFT NA TCGA-A6-6654-01A-21R-1839-07 RUNX1-PROS1 7 31 chr21:34834410:- chr3:93927407:- INFRAME Likely Oncogenic NA TCGA-A6-6782-01A-11R-1839-07 FMN1-COL22A1 1 4 chr15:32964107:- chr8:138660480:- INFRAME NA TCGA-A6-A56B-01A-31R-A28H-07 SCYL1-PACS1 4 8 chr11:65532805:+ chr11:66210362:+ INFRAME NA TCGA-A6-A56B-01A-31R-A28H-07 RUNX1-ZMAT4 4 6 chr21:34886843:- chr8:40674931:- FRAMESHIFT Likely Oncogenic NA TCGA-A6-A56B-01A-31R-A28H-07 COMMD9-CKAP5 1 2 chr11:36289362:- chr11:46790583:- INFRAME NA TCGA-AA-3511-01A-21R-1839-07 BTBD2-DOT1L 2 11 chr19:2013547:- chr19:2226183:+ . NA TCGA-AA-3660-01A-01R-1723-07 PYGB-CNBD2 78 354 chr20:25292613:+ chr20:35987395:+ INFRAME NA TCGA-AA-3660-01A-01R-1723-07 BRI3BP-IL22 1 4 chr12:124994003:+ chr12:68253494:- . NA TCGA-AA-3685-01A-02R-A32Z-07 DOPEY1-RNF144B 4 8 chr6:83067779:+ chr6:18399499:+ . NA TCGA-AA-3712-01A-21R-1723-07 PAN3-FLT3 12 16 chr13:28177935:+ chr13:28070612:- FRAMESHIFT NA TCGA-AD-6888-01A-11R-1928-07 DEAF1-HRAS 13 64 chr11:680963:- chr11:532755:- FRAMESHIFT NA TCGA-AD-6895-01A-11R-1928-07 TANC1-MARCH7 2 6 chr2:159001189:+ chr2:159729009:+ . NA TCGA-AD-6899-01A-11R-1928-07 CWC25-JUP 8 40 chr17:38825166:- chr17:41758870:- INFRAME NA TCGA-AD-6899-01A-11R-1928-07 HEPH-ZC3H12B 4 43 chrX:66208246:+ chrX:65488646:+ . NA TCGA-AD-6899-01A-11R-1928-07 ATE1-ANXA10 3 4 chr10:121836718:- chr4:168139486:+ FRAMESHIFT NA TCGA-AD-6901-01A-11R-1928-07 ARHGEF18-MAPKAP1 3 36 chr19:7442052:+ chr9:125471415:- . NA TCGA-AD-6901-01A-11R-1928-07 AP3M2-PLAT 2 17 chr8:42170059:+ chr8:42176151:- . NA TCGA-AD-6963-01A-11R-1928-07 VTI1A-TCF7L2 4 5 chr10:112464657:+ chr10:113141184:+ INFRAME Likely Oncogenic NA TCGA-AD-6964-01A-11R-1928-07 CCDC85C-SETD3 1 3 chr14:99603167:- chr14:99465813:- . NA TCGA-AD-6965-01A-11R-1928-07 TCN2-THOC5 6 10 chr22:30614501:+ chr22:29512136:- INFRAME NA TCGA-AD-6965-01A-11R-1928-07 VTI1A-TCF7L2 2 10 chr10:112464657:+ chr10:113141184:+ INFRAME Likely Oncogenic NA TCGA-AD-A5EJ-01A-11R-A28H-07 CASP8AP2-HACE1 6 18 chr6:89857199:+ chr6:104730416:- INFRAME NA TCGA-AD-A5EK-01A-11R-A28H-07 GRHPR-ZCCHC7 1 3 chr9:37432138:+ chr9:37302188:+ INFRAME NA TCGA-AM-5820-01A-01R-1653-07 SAMD4B-SPTBN4 7 82 chr19:39348389:+ chr19:40572338:+ . NA TCGA-AM-5820-01A-01R-1653-07 ARID5A-CNNM4 9 21 chr2:96536830:+ chr2:96797012:+ INFRAME NA TCGA-AM-5820-01A-01R-1653-07 CHCHD3-ITPKA 3 31 chr7:132975169:- chr15:41502402:+ INFRAME NA TCGA-AM-5820-01A-01R-1653-07 USP6NL-LYZL1 1 1 chr10:11597631:- chr10:29291843:+ FRAMESHIFT NA TCGA-AY-5543-01A-01R-1653-07 AGAP1-CIR1 13 119 chr2:235807331:+ chr2:174387779:- INFRAME NA TCGA-AY-5543-01A-01R-1653-07 SLC25A33-APIP 2 1 chr1:9553805:+ chr11:34883504:- INFRAME NA TCGA-AY-6196-01A-11R-1723-07 KIAA0368-CARD19 1 13 chr9:111383211:- chr9:93107674:+ FRAMESHIFT NA TCGA-AY-6196-01A-11R-1723-07 ATG5-ADGRG6 2 6 chr6:106308364:- chr6:142414969:+ FRAMESHIFT NA TCGA-AY-6196-01A-11R-1723-07 CARD19-KIAA0368 1 8 chr9:93107827:+ chr9:111390101:- . NA TCGA-AY-6196-01A-11R-1723-07 EPB41L2-MAP4K1 1 8 chr6:131063155:- chr19:38587817:- . NA TCGA-AY-6196-01A-11R-1723-07 GNA14-TNFSF8 2 3 chr9:77647670:- chr9:114918138:- FRAMESHIFT NA TCGA-AY-A54L-01A-11R-A28H-07 DPEP1-TCF25 5 4 chr16:89613719:+ chr16:89910591:+ . NA TCGA-AY-A54L-01A-11R-A28H-07 MPHOSPH8-ATP8A2 1 5 chr13:19633961:+ chr13:25961575:+ INFRAME NA TCGA-AY-A71X-01A-12R-A37K-07 NEK6-RASEF 3 3 chr9:124258085:+ chr9:83001130:- . NA TCGA-AY-A8YK-01A-11R-A41B-07 SLC39A11-RPTOR 4 22 chr17:73031556:- chr17:80707841:+ INFRAME NA TCGA-AY-A8YK-01A-11R-A41B-07 SMURF2P1-CA10 1 17 chr17:30610942:+ chr17:51747818:- . NA TCGA-AY-A8YK-01A-11R-A41B-07 PRKCA-TMEM100 1 13 chr17:66496283:+ chr17:55727982:- . NA TCGA-AZ-4323-01A-21R-1839-07 TAOK1-VMP1 18 80 chr17:29517656:+ chr17:59764971:+ INFRAME NA TCGA-AZ-4323-01A-21R-1839-07 MID1-DOCK11 7 37 chrX:10833554:- chrX:118662686:+ . NA TCGA-AZ-4323-01A-21R-1839-07 VMP1-KRTAP4-6 3 39 chr17:59738947:+ chr17:41140448:- INFRAME NA TCGA-AZ-4323-01A-21R-1839-07 SNX13-AUTS2 3 5 chr7:17796827:- chr7:70290368:+ FRAMESHIFT NA TCGA-AZ-4323-01A-21R-1839-07 IGSF3-SYCP1 1 9 chr1:116666284:- chr1:114947246:+ FRAMESHIFT NA TCGA-AZ-6599-01A-11R-1774-07 ACYP2-EML6 2 9 chr2:53973810:+ chr2:54899641:+ FRAMESHIFT NA TCGA-AZ-6600-01A-11R-1774-07 SYBU-NUDCD1 9 17 chr8:109586060:- chr8:109245481:- FRAMESHIFT NA TCGA-AZ-6605-01A-11R-1839-07 ACE2-GPR143 31 142 chrX:15578089:- chrX:9725840:- INFRAME NA TCGA-AZ-6606-01A-11R-1839-07 POMK-CHRNA6 17 31 chr8:43103830:+ chr8:42765204:- FRAMESHIFT NA TCGA-CA-5254-01A-21R-1839-07 CLTC-CEP95 43 235 chr17:59661643:+ chr17:64536602:+ INFRAME NA TCGA-CA-5254-01A-21R-1839-07 MXI1-TMEM254 11 40 chr10:110208082:+ chr10:80081841:+ FRAMESHIFT NA TCGA-CA-5254-01A-21R-1839-07 IFIT5-HK1 10 10 chr10:89414803:+ chr10:69343827:+ FRAMESHIFT NA TCGA-CA-5254-01A-21R-1839-07 GBF1-NT5C2 4 32 chr10:102260116:+ chr10:103106706:- INFRAME NA TCGA-CA-5254-01A-21R-1839-07 RICTOR-ISL1 2 6 chr5:39074111:- chr5:51384541:+ INFRAME NA TCGA-CA-5256-01A-01R-1410-07 CNDP2-NPC1 31 128 chr18:74506011:+ chr18:23506642:- INFRAME NA TCGA-CA-6715-01A-21R-1839-07 HOOK3-TGS1 5 11 chr8:42906258:+ chr8:55782748:+ INFRAME NA TCGA-CA-6716-01A-11R-1839-07 RNF213-SLC26A11 4 13 chr17:80350396:+ chr17:80251329:+ FRAMESHIFT NA TCGA-CA-6716-01A-11R-1839-07 KPNA3-DLEU2 3 5 chr13:49705621:- chr13:49997419:- . NA TCGA-CK-4947-01B-11R-1653-07 DPEP1-TCF25 1 8 chr16:89630514:+ chr16:89910591:+ INFRAME NA TCGA-CK-5913-01A-11R-1653-07 PXDN-MYT1L 2 2 chr2:1744256:- chr2:1840843:- INFRAME NA TCGA-CK-5915-01A-11R-1653-07 MVP-TMEM219 15 8 chr16:29820510:+ chr16:29968025:+ . NA TCGA-CK-6751-01A-11R-1839-07 DPEP1-TCF25 1 9 chr16:89613719:+ chr16:89910591:+ . NA TCGA-CM-4743-01A-01R-1723-07 PDE10A-SMOC2 14 8 chr6:165431422:- chr6:168673213:+ . NA TCGA-CM-4743-01A-01R-1723-07 LPCAT2-DNAJA2 4 4 chr16:55509352:+ chr16:46957220:- INFRAME NA TCGA-CM-4743-01A-01R-1723-07 DNAJA2-LPCAT2 1 4 chr16:46959003:- chr16:55528377:+ FRAMESHIFT NA TCGA-CM-5348-01A-21R-1723-07 ATP5A1-HAUS1 3 25 chr18:46104137:- chr18:46118181:+ . NA TCGA-CM-5348-01A-21R-1723-07 DPH6-SHC4 8 3 chr15:35546119:- chr15:48835022:- FRAMESHIFT NA TCGA-CM-5348-01A-21R-1723-07 YWHAE-ERCC8 6 11 chr17:1400047:- chr5:60928959:- FRAMESHIFT NA TCGA-CM-5348-01A-21R-1723-07 TLN2-LACTB 4 17 chr15:62589762:+ chr15:63122636:+ FRAMESHIFT NA TCGA-CM-5348-01A-21R-1723-07 OPN3-FH 5 8 chr1:241639882:- chr1:241517316:- INFRAME NA TCGA-CM-5348-01A-21R-1723-07 SLCO3A1-DPH6 4 10 chr15:92126259:+ chr15:35542507:- INFRAME NA TCGA-CM-5348-01A-21R-1723-07 C15orf41-SLCO3A1 2 12 chr15:36579961:+ chr15:92120465:+ FRAMESHIFT NA TCGA-CM-5349-01A-21R-1723-07 TMEM170A-NUP93 1 42 chr16:75464232:- chr16:56805504:+ FRAMESHIFT NA TCGA-CM-5349-01A-21R-1723-07 HIVEP2-SMAP1 1 19 chr6:142945944:- chr6:70798657:+ . NA TCGA-CM-5860-01A-01R-1653-07 ABHD12-PPP2R2A 11 43 chr20:25314925:- chr8:26338890:+ INFRAME NA TCGA-CM-5860-01A-01R-1653-07 NFAT5-VPS4A 4 11 chr16:69566374:+ chr16:69316008:+ FRAMESHIFT NA TCGA-CM-5862-01A-01R-1653-07 GPALPP1-VWA8 59 230 chr13:45008879:+ chr13:41568305:- FRAMESHIFT NA TCGA-CM-5862-01A-01R-1653-07 GPALPP1-MIR5006 59 55 chr13:45008879:+ chr13:41568305:- . NA TCGA-CM-5862-01A-01R-1653-07 PLBD1-GRIN2B 2 2 chr12:14567582:- chr12:13981576:- . NA TCGA-CM-5868-01A-01R-1653-07 ANO6-PEBP4 2 9 chr12:45216391:+ chr8:22817735:- FRAMESHIFT NA TCGA-CM-5868-01A-01R-1653-07 SFXN5-DYNLL2 1 4 chr2:73040854:- chr17:58089142:+ INFRAME NA TCGA-CM-6163-01A-11R-1653-07 SENP3-ABR 15 41 chr17:7567004:+ chr17:1058867:- INFRAME NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGA10 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGA11 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGA12 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGA8 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGA9 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGB5 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGB6 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGB7 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGC3 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGC4 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6163-01A-11R-1653-07 SKIV2L2-PCDHGC5 16 37 chr5:55328811:+ chr5:141494807:+ FRAMESHIFT NA TCGA-CM-6164-01A-11R-1653-07 KIF16B-SNX5 8 14 chr20:16526092:- chr20:17943195:- FRAMESHIFT NA TCGA-CM-6166-01A-11R-1653-07 RNF170-ADAM32 2 8 chr8:42887728:- chr8:39221610:+ FRAMESHIFT NA TCGA-CM-6167-01A-11R-1653-07 KLF11-TMEM247 5 25 chr2:10046419:+ chr2:46484244:+ INFRAME NA TCGA-CM-6167-01A-11R-1653-07 CARM1-KLF11 1 3 chr19:10871922:+ chr2:10047650:+ INFRAME NA TCGA-CM-6170-01A-11R-1653-07 ITCH-MANBAL 4 7 chr20:34408792:+ chr20:37316308:+ FRAMESHIFT NA TCGA-CM-6170-01A-11R-1653-07 SERINC3-WFDC11 3 5 chr20:44509891:- chr20:45650651:- . NA TCGA-CM-6170-01A-11R-1653-07 HM13-ZBTB46 2 6 chr20:31550121:+ chr20:63775962:- INFRAME NA TCGA-CM-6170-01A-11R-1653-07 ZNF107-FOXP2 2 4 chr7:64691960:+ chr7:114162944:+ . NA TCGA-CM-6170-01A-11R-1653-07 VTI1A-TCF7L2 1 1 chr10:112464657:+ chr10:113141184:+ INFRAME Likely Oncogenic NA TCGA-CM-6170-01A-11R-1653-07 SLC12A2-C5orf58 1000 1000 chr5:128188323:+ chr5:170233260:+ . NA TCGA-CM-6172-01A-11R-1653-07 ZFX-GLYATL2 33 153 chrX:24152830:+ chr11:58844524:- . NA TCGA-CM-6172-01A-11R-1653-07 CHD7-TOX 18 83 chr8:60743097:+ chr8:58960008:- INFRAME NA TCGA-CM-6172-01A-11R-1653-07 PTP4A3-DKFZP434K028 13 17 chr8:141427824:+ chr11:61755696:- . NA TCGA-CM-6172-01A-11R-1653-07 RORA-ICE2 1 4 chr15:60592387:- chr15:60442545:- FRAMESHIFT NA TCGA-CM-6172-01A-11R-1653-07 SNX6-ADAMTS12 1 3 chr14:34629907:- chr5:33751548:- INFRAME NA TCGA-CM-6675-01A-11R-1839-07 MED13L-PTPRR 1 33 chr12:116096669:- chr12:70764778:- FRAMESHIFT NA TCGA-CM-6675-01A-11R-1839-07 WBSCR22-LIMK1 3 8 chr7:73697694:+ chr7:74105875:+ INFRAME NA TCGA-CM-6677-01A-11R-1839-07 KIAA0319L-LRRIQ1 3 8 chr1:35460305:- chr12:85262915:+ . NA TCGA-CM-6677-01A-11R-1839-07 GTF2IRD1-RHBDD2 1 5 chr7:74524154:+ chr7:75881365:+ INFRAME NA TCGA-CM-6680-01A-11R-1839-07 DPEP1-TCF25 5 7 chr16:89613719:+ chr16:89910591:+ . NA TCGA-D5-5537-01A-21R-1928-07 PUM1-RNF207 7 10 chr1:30980062:- chr1:6206176:+ . NA TCGA-D5-5538-01A-01R-1653-07 KCNQ1-GALNTL6 10 36 chr11:2778037:+ chr4:173009178:+ INFRAME NA TCGA-D5-5538-01A-01R-1653-07 FAT1-NPY1R 1 3 chr4:186726354:- chr4:163326705:- . Likely Oncogenic NA TCGA-D5-5539-01A-01R-1653-07 SERPINE2-FARSB 38 129 chr2:223984752:- chr2:222572022:- FRAMESHIFT NA TCGA-D5-5540-01A-01R-1653-07 ATP13A3-DNAJC13 6 25 chr3:194485794:- chr3:132500794:+ . NA TCGA-D5-5541-01A-01R-1653-07 RGS19-RPSAP18 3 27 chr20:64074000:- chr1:160266614:- . NA TCGA-D5-5541-01A-01R-1653-07 PLCB1-SMOX 1 5 chr20:8733392:+ chr20:4120980:+ . NA TCGA-D5-6529-01A-11R-1774-07 ARHGEF1-TMEM120A 1 2 chr19:41896482:+ chr7:75988516:- INFRAME NA TCGA-D5-6529-01A-11R-1774-07 FAM122B-PCBP2 1 1 chrX:134797121:- chr12:53454726:+ . NA TCGA-D5-6530-01A-11R-1723-07 C6orf222-ETV7 26 250 chr6:36325283:- chr6:36354687:- FRAMESHIFT NA TCGA-D5-6531-01A-11R-1723-07 ERBB2-DNAJC7 6 40 chr17:39688278:+ chr17:41982401:- . NA TCGA-D5-6531-01A-11R-1723-07 ABHD16A-CLIC1 2 13 chr6:31700942:- chr6:31732398:- INFRAME NA TCGA-D5-6531-01A-11R-1723-07 TPX2-REM1 3 5 chr20:31760179:+ chr20:31484159:+ INFRAME NA TCGA-D5-6533-01A-11R-1723-07 SAE1-FGF9 2 4 chr19:47143605:+ chr13:21701190:+ INFRAME NA TCGA-D5-6533-01A-11R-1723-07 IPO8-TMTC1 2 3 chr12:30695564:- chr12:29536317:- FRAMESHIFT NA TCGA-D5-6534-01A-21R-1928-07 ARL8B-USP4 9 29 chr3:5122588:+ chr3:49302542:- INFRAME NA TCGA-D5-6534-01A-21R-1928-07 TMEM216-KCNG3 2 8 chr11:61393332:+ chr2:42444579:- FRAMESHIFT NA TCGA-D5-6534-01A-21R-1928-07 USP4-SCRIB 2 6 chr3:49324702:- chr8:143795530:- FRAMESHIFT NA TCGA-D5-6536-01A-11R-1723-07 RFX3-TFDP1 1 25 chr9:3525747:- chr13:113610996:+ . NA TCGA-D5-6536-01A-11R-1723-07 ANK3-ACTA2 1 15 chr10:60615186:- chr10:88938242:- FRAMESHIFT NA TCGA-D5-6536-01A-11R-1723-07 REG3A-SERPINA1 1 8 chr2:79158648:- chr14:94381141:- . NA TCGA-D5-6539-01A-11R-1723-07 BRPF3-KCTD20 1 5 chr6:36225364:+ chr6:36470052:+ . NA TCGA-D5-6541-01A-11R-1723-07 ARHGEF1-TMEM120A 1 4 chr19:41896482:+ chr7:75988516:- INFRAME NA TCGA-D5-6541-01A-11R-1723-07 CANT1-MROH1 1 2 chr17:79009664:- chr8:144220600:+ . NA TCGA-D5-6922-01A-11R-1928-07 MLLT10-ASCC1 1 13 chr10:21617207:+ chr10:72133181:- FRAMESHIFT NA TCGA-D5-6922-01A-11R-1928-07 KIAA0319L-GNB1 1 12 chr1:35462621:- chr1:1839238:- . NA TCGA-D5-6924-01A-11R-1928-07 CCNL2-MRPL20 42 89 chr1:1398233:- chr1:1402256:- INFRAME NA TCGA-D5-6924-01A-11R-1928-07 NNT-PRLR 1 3 chr5:43628387:+ chr5:35072744:- INFRAME NA TCGA-D5-6926-01A-11R-1928-07 NSD3-ADAM18 74 103 chr8:38279540:- chr8:39729898:+ FRAMESHIFT NA TCGA-D5-6926-01A-11R-1928-07 CKAP2-SMCO2 1 8 chr13:52474084:+ chr12:27501923:+ INFRAME NA TCGA-D5-6929-01A-31R-1928-07 ZNF24-ACAA2 62 159 chr18:35344370:- chr18:49795881:- . NA TCGA-D5-6929-01A-31R-1928-07 GNA13-ASPSCR1 31 112 chr17:65053502:- chr17:82009037:+ INFRAME NA TCGA-D5-6929-01A-31R-1928-07 PRKAR1A-PITPNC1 13 73 chr17:68515576:+ chr17:67532802:+ INFRAME NA TCGA-D5-6929-01A-31R-1928-07 SEPT9-METTL2A 9 16 chr17:77451528:+ chr17:62444837:+ . NA TCGA-D5-6929-01A-31R-1928-07 TPGS2-DSG1 6 22 chr18:36818894:- chr18:31326581:+ INFRAME NA TCGA-D5-6929-01A-31R-1928-07 SP6-IGKJ1 8 0 chr17:47847039:- chr2:88861917:- . NA TCGA-D5-6929-01A-31R-1928-07 ACACA-GSDMB 2 14 chr17:37270751:- chr17:39912497:- FRAMESHIFT NA TCGA-D5-6929-01A-31R-1928-07 DNM1L-TSPAN11 2 13 chr12:32679465:+ chr12:30953981:+ . NA TCGA-D5-6929-01A-31R-1928-07 RAB40B-TAF15 3 5 chr17:82698455:- chr17:35838424:+ FRAMESHIFT NA TCGA-D5-6929-01A-31R-1928-07 MYO18A-MYO1D 2 3 chr17:29082316:- chr17:32494915:- INFRAME NA TCGA-D5-6929-01A-31R-1928-07 USP32-STXBP4 2 3 chr17:60181324:- chr17:55072900:+ INFRAME NA TCGA-D5-6929-01A-31R-1928-07 YBX3-ATF7IP 1 6 chr12:10713211:- chr12:14423909:+ FRAMESHIFT NA TCGA-D5-6929-01A-31R-1928-07 DTNA-LDLRAD4 1 5 chr18:34493514:+ chr18:13621117:+ . NA TCGA-D5-6931-01A-11R-1928-07 TRNAU1AP-PTPRU 9 26 chr1:28553737:+ chr1:29291869:+ INFRAME NA TCGA-D5-6932-01A-11R-1928-07 ANTXR2-OR7E94P 10 25 chr4:80031623:- chr4:79588090:- . NA TCGA-D5-6932-01A-11R-1928-07 REL-KIAA1841 3 33 chr2:60918606:+ chr2:61115979:+ INFRAME NA TCGA-DM-A0X9-01A-11R-A155-07 DSP-HDLBP 2 43 chr6:7575488:+ chr2:241230944:- FRAMESHIFT NA TCGA-DM-A0X9-01A-11R-A155-07 HDLBP-DSP 2 18 chr2:241233820:- chr6:7576294:+ FRAMESHIFT NA TCGA-DM-A0XD-01A-12R-A155-07 DZANK1-DTD1 2 24 chr20:18427067:- chr20:18744100:+ INFRAME NA TCGA-DM-A0XF-01A-11R-A155-07 KCNQ1-SCT 90 298 chr11:2528018:+ chr11:626530:- FRAMESHIFT NA TCGA-DM-A0XF-01A-11R-A155-07 PPP2CA-VDAC1 43 209 chr5:134225760:- chr5:133973848:- INFRAME NA TCGA-DM-A0XF-01A-11R-A155-07 DDAH1-TRABD2B 4 18 chr1:85464743:- chr1:47801619:- INFRAME NA TCGA-DM-A0XF-01A-11R-A155-07 FOXO3-GMDS 3 7 chr6:108561829:+ chr6:1960966:- INFRAME NA TCGA-DM-A0XF-01A-11R-A155-07 BMP7-EEF1A2 2 6 chr20:57265705:- chr20:63497834:- . NA TCGA-DM-A0XF-01A-11R-A155-07 UBTF-CA10 1 10 chr17:44209352:- chr17:51931132:- INFRAME NA TCGA-DM-A0XF-01A-11R-A155-07 CMC1-ZCWPW2 1 9 chr3:28263380:+ chr3:28492127:+ INFRAME NA TCGA-DM-A0XF-01A-11R-A155-07 PPP2CA-C5orf15 1 7 chr5:134225760:- chr5:133960020:- FRAMESHIFT NA TCGA-DM-A1D0-01A-11R-A155-07 OTUB1-KMT5B 14 183 chr11:64001520:+ chr11:68171709:- FRAMESHIFT NA TCGA-DM-A1D0-01A-11R-A155-07 PLEKHM3-MAP2 2 9 chr2:208025389:- chr2:209625053:+ . NA TCGA-DM-A1D0-01A-11R-A155-07 NDRG3-BCAS4 2 5 chr20:36682518:- chr20:50818211:+ INFRAME NA TCGA-DM-A1D4-01A-21R-A155-07 TMEM245-IKBKAP 2 11 chr9:109080839:- chr9:108927453:- INFRAME NA TCGA-DM-A1D6-01A-21R-A155-07 PTPRM-ELP4 2 20 chr18:8143779:+ chr11:31783393:+ INFRAME NA TCGA-DM-A1D6-01A-21R-A155-07 FAM49B-GNAL 1 4 chr8:129871375:- chr18:11862395:+ INFRAME NA TCGA-DM-A1D7-01A-11R-A155-07 YWHAB-GLO1 25 101 chr20:44885886:+ chr6:38686974:- . NA TCGA-DM-A1D7-01A-11R-A155-07 NFYA-TREML2 2 20 chr6:41090309:+ chr6:41194833:- INFRAME NA TCGA-DM-A1D7-01A-11R-A155-07 TNFSF13B-RAB20 1 11 chr13:108270424:+ chr13:110524197:- INFRAME NA TCGA-DM-A1D7-01A-11R-A155-07 SFI1-OSBP2 1 7 chr22:31508376:+ chr22:30870429:+ FRAMESHIFT NA TCGA-DM-A1D7-01A-11R-A155-07 CLIC5-SUPT3H 1 4 chr6:45949256:- chr6:45106006:- INFRAME NA TCGA-DM-A1D8-01A-11R-A155-07 PTPRF-ARTN 7 38 chr1:43592601:+ chr1:43935655:+ . NA TCGA-DM-A1D8-01A-11R-A155-07 SND1-ARF5 3 14 chr7:127694908:+ chr7:127588404:+ . NA TCGA-DM-A1D8-01A-11R-A155-07 USP7-TMEM186 2 6 chr16:8963207:- chr16:8781444:- . NA TCGA-DM-A1DA-01A-11R-A155-07 SFXN1-CPLX2 5 17 chr5:175492267:+ chr5:175878652:+ . NA TCGA-DM-A1HA-01A-11R-A155-07 PANK2-PAK5 6 20 chr20:3889728:+ chr20:9644339:- . NA TCGA-DM-A1HA-01A-11R-A155-07 FHOD3-MTUS2 2 10 chr18:36760782:+ chr13:29480150:+ INFRAME NA TCGA-DM-A1HA-01A-11R-A155-07 GUSBP11-MIF 1 12 chr22:23686831:- chr22:23894772:+ . NA TCGA-DM-A1HA-01A-11R-A155-07 SLC23A2-CDS2 1 7 chr20:5001406:- chr20:5182387:+ . NA TCGA-DM-A1HA-01A-11R-A155-07 TAOK1-ANKRD13B 2 1 chr17:29391024:+ chr17:29607742:+ . NA TCGA-DM-A280-01A-12R-A16W-07 TRIM36-MCTP1 2 5 chr5:115144598:- chr5:95017484:- INFRAME NA TCGA-DM-A285-01A-11R-A16W-07 IPO13-EIF2B3 1 9 chr1:43961262:+ chr1:44857807:- FRAMESHIFT NA TCGA-DM-A288-01A-11R-A16W-07 CHD1-RGMB 9 39 chr5:98879552:- chr5:98793085:+ INFRAME NA TCGA-DM-A28A-01A-21R-A32Y-07 NT5C2-ARL3 7 25 chr10:103139406:- chr10:102689943:- FRAMESHIFT NA TCGA-DM-A28A-01A-21R-A32Y-07 ORMDL1-RALGDS 7 17 chr2:189784269:- chr9:133104331:- . NA TCGA-DM-A28A-01A-21R-A32Y-07 ANKHD1-USO1 4 11 chr5:140513479:+ chr4:75752373:+ INFRAME NA TCGA-DM-A28A-01A-21R-A32Y-07 RASA3-SCARA3 4 5 chr13:113999585:- chr8:27670900:+ FRAMESHIFT NA TCGA-DM-A28A-01A-21R-A32Y-07 MRRF-TTLL11 3 8 chr9:122291840:+ chr9:121870748:- INFRAME NA TCGA-DM-A28A-01A-21R-A32Y-07 CCDC171-CNTLN 2 2 chr9:15784694:+ chr9:17457524:+ INFRAME NA TCGA-DM-A28A-01A-21R-A32Y-07 SEPT11-WWC2 1 4 chr4:76949930:+ chr4:183193599:+ FRAMESHIFT NA TCGA-DM-A28F-01A-11R-A32Y-07 MIPEP-MYO16 5 29 chr13:23805950:- chr13:108855443:+ INFRAME NA TCGA-DM-A28F-01A-11R-A32Y-07 MIPEP-POLR1D 4 9 chr13:23805950:- chr13:27738707:+ FRAMESHIFT NA TCGA-DM-A28F-01A-11R-A32Y-07 BPNT1-RAB3GAP2 2 12 chr1:220089686:- chr1:220154057:- . NA TCGA-DM-A28F-01A-11R-A32Y-07 PROSER1-MIPEP 2 10 chr13:39029281:- chr13:23870195:- FRAMESHIFT NA TCGA-DM-A28F-01A-11R-A32Y-07 CARD11-ZNRD1 1 7 chr7:3043667:- chr6:30061515:+ . NA TCGA-DM-A28F-01A-11R-A32Y-07 TMEM223-SLC22A6 1 7 chr11:62791679:- chr11:62936486:- . NA TCGA-DM-A28H-01A-11R-A16W-07 GBE1-MKRN2OS 6 77 chr3:81705444:- chr3:12515016:- . NA TCGA-F4-6459-01A-11R-1774-07 MED14-SRPX 19 80 chrX:40688454:- chrX:38149894:- INFRAME NA TCGA-F4-6459-01A-11R-1774-07 MTUS2-PTPN14 8 70 chr13:28820611:+ chr1:214402953:- . NA TCGA-F4-6459-01A-11R-1774-07 MAP3K13-NSUN2 1 17 chr3:185328962:+ chr5:6625669:- . NA TCGA-F4-6459-01A-11R-1774-07 ZNF717-FOXP1 3 5 chr3:75783306:- chr3:71493555:- . Likely Oncogenic NA TCGA-F4-6461-01A-11R-1774-07 FRYL-CORIN 5 39 chr4:48570827:- chr4:47626521:- INFRAME NA TCGA-F4-6461-01A-11R-1774-07 DHX8-PPY 3 6 chr17:43484185:+ chr17:43941214:- INFRAME NA TCGA-F4-6461-01A-11R-1774-07 SIN3A-SEMA7A 1 7 chr15:75451423:- chr15:74418952:- . NA TCGA-F4-6461-01A-11R-1774-07 LDLRAD4-DLGAP1 1 3 chr18:13621271:+ chr18:3582248:- FRAMESHIFT NA TCGA-F4-6570-01A-11R-1774-07 FUCA1-TCEA3 11 49 chr1:23854360:- chr1:23418009:- INFRAME NA TCGA-F4-6807-01A-11R-1839-07 CHD7-TCF7L2 15 72 chr8:60743097:+ chr10:113141184:+ INFRAME Likely Oncogenic NA TCGA-F4-6807-01A-11R-1839-07 TCF7L2-CHD7 3 17 chr10:113040126:+ chr8:60781000:+ INFRAME Likely Oncogenic NA TCGA-F4-6809-01A-11R-1839-07 FUS-PYCARD 2 116 chr16:31182422:+ chr16:31202203:- FRAMESHIFT NA TCGA-F4-6854-01A-11R-1928-07 MAP7-OPRM1 2 8 chr6:136411620:- chr6:154073515:+ . NA TCGA-G4-6294-01A-11R-1774-07 ABR-YWHAE 1 1 chr17:1228793:- chr17:1365058:- . NA TCGA-G4-6295-01A-11R-1723-07 LIPE-CXCL17 1 10 chr19:42423419:- chr19:42433856:- INFRAME NA TCGA-G4-6298-01A-11R-1723-07 KIAA2026-INSL6 2 27 chr9:5988345:- chr9:5164265:- FRAMESHIFT NA TCGA-G4-6298-01A-11R-1723-07 CELSR1-RNF215 1 4 chr22:46533627:- chr22:30388279:- . NA TCGA-G4-6299-01A-11R-1774-07 GPHN-ARG2 1 11 chr14:67058786:+ chr14:67646921:+ FRAMESHIFT NA TCGA-G4-6299-01A-11R-1774-07 ANKRD12-TXNDC2 1 4 chr18:9275667:+ chr18:9885962:+ . NA TCGA-G4-6303-01A-11R-1774-07 ITCH-PIGU 9 59 chr20:34489926:+ chr20:34560979:- INFRAME NA TCGA-G4-6304-01A-11R-1928-07 ATF7-ATP5G2 3 6 chr12:53626279:- chr12:53669948:- . NA TCGA-G4-6306-01A-11R-1774-07 CALCB-INSC 1000 1000 chr11:15080961:+ chr11:15149130:+ . NA TCGA-G4-6307-01A-11R-1723-07 PSMD1-NHEJ1 10 82 chr2:231146356:+ chr2:219147795:- INFRAME NA TCGA-G4-6307-01A-11R-1723-07 GRB14-PSMD1 1 8 chr2:164547660:- chr2:231153564:+ FRAMESHIFT NA TCGA-G4-6309-01A-21R-1839-07 DPH7-ZMYND19 2 4 chr9:137578625:- chr9:137588718:- INFRAME NA TCGA-G4-6311-01A-11R-1723-07 NDUFAF6-FAM92A 5 15 chr8:94958179:+ chr8:93726394:+ . NA TCGA-G4-6315-01A-11R-1723-07 SPATA2-RTFDC1 2 19 chr20:49915380:- chr20:56513315:+ . NA TCGA-G4-6317-01A-11R-1723-07 MTMR2-MMP8 23 75 chr11:95914242:- chr11:102725003:- . NA TCGA-G4-6322-01A-11R-1723-07 MIB1-MYO5B 14 45 chr18:21858646:+ chr18:49880455:- INFRAME NA TCGA-G4-6322-01A-11R-1723-07 PLEKHG1-CCDC170 4 5 chr6:150650786:+ chr6:151536318:+ . NA TCGA-G4-6322-01A-11R-1723-07 ETHE1-POU2F2 2 3 chr19:43527097:- chr19:42096243:- INFRAME NA TCGA-G4-6322-01A-11R-1723-07 PSMD1-TRPM8 1 5 chr2:231087181:+ chr2:233980188:+ FRAMESHIFT NA TCGA-G4-6323-01A-11R-1723-07 NCEH1-EEF1G 8 60 chr3:172710847:- chr11:62559837:- INFRAME NA TCGA-G4-6588-01A-11R-1774-07 CDC42-CELA3A 2 5 chr1:22052742:+ chr1:22005447:+ . NA TCGA-G4-6626-01A-11R-1774-07 GAS2L3-SND1 7 27 chr12:100601753:+ chr7:127694828:+ INFRAME NA TCGA-G4-6626-01A-11R-1774-07 NSMAF-TOX 3 5 chr8:58659573:- chr8:58851805:- FRAMESHIFT NA TCGA-G4-6626-01A-11R-1774-07 C7orf50-INTS1 2 5 chr7:1127257:- chr7:1496264:- INFRAME NA TCGA-G4-6626-01A-11R-1774-07 ENO2-PIANP 1 3 chr12:6914659:+ chr12:6698104:- . NA TCGA-G4-6627-01A-11R-1774-07 DPEP1-TCF25 1 4 chr16:89613719:+ chr16:89910591:+ . NA TCGA-NH-A50U-01A-33R-A37K-07 PLEKHA5-FGF6 14 74 chr12:19130130:+ chr12:4445273:- FRAMESHIFT NA TCGA-NH-A50U-01A-33R-A37K-07 TCF12-FAM98B 1 2 chr15:57091891:+ chr15:38464032:+ FRAMESHIFT NA TCGA-NH-A50V-01A-11R-A28H-07 ITCH-SRC 1 7 chr20:34369470:+ chr20:37365204:+ . NA TCGA-NH-A6GB-01A-11R-A37K-07 FAM156A-IGKJ1 12 0 chrX:52927696:- chr2:88861920:- . NA TCGA-QG-A5YV-01A-11R-A28H-07 ZNF774-TTLL13P 1 26 chr15:90358957:+ chr15:90253249:+ INFRAME NA TCGA-QG-A5YW-01A-11R-A28H-07 IGKV2D-26-IGKJ3 20 78 chr2:89986700:+ chr2:88861253:- FRAMESHIFT NA TCGA-QG-A5YX-01A-11R-A28H-07 ZNF460-C19orf18 30 129 chr19:57280836:+ chr19:57958717:- FRAMESHIFT NA TCGA-QG-A5Z1-01A-11R-A28H-07 ZWILCH-IQCH 1 17 chr15:66515644:+ chr15:67465127:+ FRAMESHIFT NA TCGA-QG-A5Z1-01A-11R-A28H-07 MICU1-C10orf105 2 2 chr10:72475100:- chr10:71716342:- . NA TCGA-QL-A97D-01A-12R-A41B-07 B2M-SORD2P 37 78 chr15:44711613:+ chr15:44850387:- . Likely Oncogenic NA TCGA-QL-A97D-01A-12R-A41B-07 CMIP-UBE2G1 2 6 chr16:81445541:+ chr17:4307123:- FRAMESHIFT NA TCGA-QL-A97D-01A-12R-A41B-07 DOCK9-USH2A 1 5 chr13:98955435:- chr1:215639238:- FRAMESHIFT NA TCGA-RU-A8FL-01A-11R-A37K-07 GRSF1-ELFN2 1 14 chr4:70832307:- chr22:37375996:- . NA TCGA-RU-A8FL-01A-11R-A37K-07 CSPP1-TERF1 2 8 chr8:67103135:+ chr8:73045961:+ FRAMESHIFT NA TCGA-RU-A8FL-01A-11R-A37K-07 PRKDC-CLVS1 1 10 chr8:47912410:- chr8:61292318:+ . NA TCGA-RU-A8FL-01A-11R-A37K-07 UFM1-EEF1D 1 6 chr13:38350055:+ chr8:143586852:- INFRAME NA TCGA-RU-A8FL-01A-11R-A37K-07 UFM1-PSPC1 1 3 chr13:38350055:+ chr13:19677823:- INFRAME NA TCGA-T9-A92H-01A-11R-A37K-07 TRIP12-PID1 1 5 chr2:229813870:- chr2:229026108:- INFRAME NA TCGA-FA-8693-01A-11R-2404-07 LARS2-ANO10 5 27 chr3:45500579:+ chr3:43366974:- FRAMESHIFT NA TCGA-FA-A4XK-01A-11R-A31O-07 TBL1XR1-TP73 14 38 chr3:177053773:- chr1:3707549:+ INFRAME NA TCGA-FA-A4XK-01A-11R-A31O-07 LARS2-TBL1XR1 1 3 chr3:45419729:+ chr3:177051726:- INFRAME NA TCGA-FA-A6HN-01A-11R-A31O-07 CXCR4-CFLAR 16 111 chr2:136118046:- chr2:201129729:+ . NA TCGA-FA-A6HN-01A-11R-A31O-07 MAST2-NASP 8 24 chr1:45882395:+ chr1:45591223:+ INFRAME NA TCGA-FA-A6HO-01A-11R-A31O-07 IGHM-SMPD4 7 1 chr14:105851840:- chr2:130181718:- . NA TCGA-FA-A7DS-01A-11R-A38C-07 NCOR2-MORN3 1 14 chr12:124495147:- chr12:121652808:- INFRAME NA TCGA-FA-A7DS-01A-11R-A38C-07 UHRF1-KDM4B 2 3 chr19:4941931:+ chr19:5047476:+ FRAMESHIFT NA TCGA-FA-A7Q1-01A-11R-A38C-07 SOCS1-MYC 10 30 chr16:11256079:- chr8:127738251:+ . Likely Oncogenic NA TCGA-FA-A82F-01A-11R-A38C-07 FBXO46-BHMG1 12 12 chr19:45730849:- chr19:45735377:+ . NA TCGA-FA-A82F-01A-11R-A38C-07 REL-PUS10 8 27 chr2:60921999:+ chr2:60945108:- FRAMESHIFT NA TCGA-FA-A86F-01A-11R-A38C-07 CXCR4-IGHA2 3 13 chr2:136118046:- chr14:105588394:- FRAMESHIFT NA TCGA-FA-A86F-01A-11R-A38C-07 GINM1-PPIL4 2 11 chr6:149566534:+ chr6:149541431:- INFRAME NA TCGA-FA-A86F-01A-11R-A38C-07 FAM107B-PRKCQ 1 7 chr10:14604240:- chr10:6498558:- . NA TCGA-FF-8043-01A-11R-2213-07 ASH1L-ZNF687 12 34 chr1:155562153:- chr1:151290715:+ . NA TCGA-FF-8043-01A-11R-2213-07 PPP1R12A-EIF2S3L 2 28 chr12:79872808:- chr12:10522603:+ FRAMESHIFT NA TCGA-FF-8043-01A-11R-2213-07 SERTAD2-DEFB124 3 10 chr2:64750281:- chr20:31473038:- . NA TCGA-FF-8047-01A-11R-2213-07 HOXB3-PITPNC1 2 18 chr17:48604480:- chr17:67532802:+ . NA TCGA-FF-8047-01A-11R-2213-07 HOXB6-PITPNC1 2 18 chr17:48604480:- chr17:67532802:+ . NA TCGA-FF-A7CQ-01A-11R-A38C-07 FHIT-KHDRBS3 4 34 chr3:61042047:- chr8:135542654:+ . NA TCGA-FF-A7CQ-01A-11R-A38C-07 CD80-CFAP44 1 8 chr3:119557629:- chr3:113433669:- . NA TCGA-FF-A7CX-01A-12R-A38C-07 TNNT1-TNNI3 5 3 chr19:55149161:- chr19:55154830:- . NA TCGA-GR-A4D4-01A-11R-A31O-07 RAVER1-BTBD2 1 10 chr19:10333289:- chr19:1997463:- FRAMESHIFT NA TCGA-GS-A9TQ-01A-11R-A38C-07 SPIDR-CSMD3 4 7 chr8:47599196:+ chr8:112556954:- FRAMESHIFT NA TCGA-GS-A9TU-01A-11R-A38C-07 FOXP1-ACTN4 2 7 chr3:71198202:- chr19:38726957:+ INFRAME Likely Oncogenic NA TCGA-GS-A9TV-01A-11R-A38C-07 RFC1-PDS5A 64 137 chr4:39326563:- chr4:39825488:- FRAMESHIFT NA TCGA-GS-A9TV-01A-11R-A38C-07 FAM53B-PROSER2 3 12 chr10:124696158:- chr10:11866531:+ FRAMESHIFT NA TCGA-GS-A9TV-01A-11R-A38C-07 PLEKHA2-ADAM9 2 4 chr8:38918070:+ chr8:39018853:+ INFRAME NA TCGA-GS-A9TW-01A-11R-A38C-07 AICDA-SLC9A7 37 49 chr12:8612760:- chrX:46682535:- FRAMESHIFT NA TCGA-GS-A9TW-01A-11R-A38C-07 VAV2-FNBP1 19 50 chr9:133992075:- chr9:129994958:- INFRAME NA TCGA-GS-A9TY-01A-11R-A39D-07 BCL6-IGHG1 11 10 chr3:187745410:- chr14:105743070:- . Likely Oncogenic NA TCGA-GS-A9TY-01A-11R-A39D-07 CIR1-AGPS 4 20 chr2:174351619:- chr2:177538074:+ FRAMESHIFT NA TCGA-GS-A9TY-01A-11R-A39D-07 FAM221A-KLHL7 2 6 chr7:23691596:+ chr7:23117834:+ FRAMESHIFT NA TCGA-RQ-A6JB-01A-11R-A31O-07 GATAD2A-GIPC1 3 18 chr19:19465614:+ chr19:14492912:- . NA TCGA-RQ-A6JB-01A-11R-A31O-07 ASF1B-KLF1 4 6 chr19:14126121:- chr19:12885812:- . NA TCGA-RQ-A6JB-01A-11R-A31O-07 C1orf132-FAM72A 2 5 chr1:207815929:- chr1:206199884:- . NA TCGA-RQ-A6JB-01A-11R-A31O-07 COMMD1-PAPOLG 1 5 chr2:61905858:+ chr2:60760134:+ FRAMESHIFT NA TCGA-VB-A8QN-01A-11R-A38C-07 ERLIN1-DOCK1 5 20 chr10:100174208:- chr10:127403055:+ INFRAME NA TCGA-VB-A8QN-01A-11R-A38C-07 GPATCH8-ATXN7L3 4 7 chr17:44464472:- chr17:44198130:- . NA TCGA-VB-A8QN-01A-11R-A38C-07 GMDS-PPP1R11 2 9 chr6:1930103:- chr6:30068590:+ INFRAME NA TCGA-VB-A8QN-01A-11R-A38C-07 COPG1-RAB7A 1 4 chr3:129268620:+ chr3:128795360:+ . NA TCGA-VB-A8QN-01A-11R-A38C-07 PKP3-SORL1 1 4 chr11:403771:+ chr11:121632016:+ . NA TCGA-2H-A9GF-01A-11R-A37I-31 STARD3-IKZF3 276 170 chr17:39637231:+ chr17:39832151:- . NA TCGA-2H-A9GF-01A-11R-A37I-31 STARD13-CAB39L 68 35 chr13:33350290:- chr13:49382941:- . NA TCGA-2H-A9GF-01A-11R-A37I-31 SYNRG-DDX52 46 12 chr17:37568791:- chr17:37609909:- . NA TCGA-2H-A9GF-01A-11R-A37I-31 AGAP1-C1orf115 29 10 chr2:235968623:+ chr1:220696612:+ FRAMESHIFT NA TCGA-2H-A9GF-01A-11R-A37I-31 USP18-ADM2 8 3 chr22:18161486:+ chr22:50481592:+ . NA TCGA-2H-A9GF-01A-11R-A37I-31 ERBB2-PPP1R1B 1 1 chr17:39715939:+ chr17:39633883:+ INFRAME NA TCGA-2H-A9GH-01A-11R-A37I-31 CPNE8-MGST1 35 14 chr12:38762112:- chr12:16354231:+ . NA TCGA-2H-A9GH-01A-11R-A37I-31 NLRC5-FTO 13 10 chr16:57046641:+ chr16:54111762:+ INFRAME NA TCGA-2H-A9GH-01A-11R-A37I-31 LEPR-MEF2D 10 6 chr1:65605237:+ chr1:156469020:- INFRAME NA TCGA-2H-A9GI-01A-11R-A37I-31 YTHDC1-GAK 61 15 chr4:68349726:- chr4:898158:- INFRAME NA TCGA-2H-A9GI-01A-11R-A37I-31 MAN2B1-FBXW9 22 5 chr19:12649136:- chr19:12691454:- INFRAME NA TCGA-2H-A9GI-01A-11R-A37I-31 ZBTB5-SLC24A2 15 3 chr9:37465215:- chr9:19577022:- . NA TCGA-2H-A9GI-01A-11R-A37I-31 WIPF2-TMEM99 12 3 chr17:40256522:+ chr17:40833115:+ . NA TCGA-2H-A9GM-01A-11R-A37I-31 ANXA5-TRMT44 35 8 chr4:121677894:- chr4:8493266:+ . NA TCGA-2H-A9GN-01A-11R-A37I-31 EIF2AK4-TMOD3 74 41 chr15:39955768:+ chr15:51931031:+ . NA TCGA-2H-A9GN-01A-11R-A37I-31 LRFN1-DLL3 22 5 chr19:39313931:- chr19:39502815:+ FRAMESHIFT NA TCGA-2H-A9GN-01A-11R-A37I-31 LPCAT4-SPRED1 21 6 chr15:34362196:- chr15:38299373:+ INFRAME NA TCGA-2H-A9GN-01A-11R-A37I-31 MINDY4-ZNRF2 18 3 chr7:30782212:+ chr7:30366035:+ . NA TCGA-2H-A9GN-01A-11R-A37I-31 GNAI3-CYB561D1 13 12 chr1:109586882:+ chr1:109495143:+ INFRAME NA TCGA-2H-A9GN-01A-11R-A37I-31 ALYREF-CCDC57 14 2 chr17:81888441:- chr17:82155628:- . NA TCGA-2H-A9GR-01A-12R-A37I-31 D2HGDH-MLPH 13 3 chr2:241744944:+ chr2:237554705:+ . NA TCGA-2H-A9GR-01A-12R-A37I-31 KPNA3-EBPL 11 10 chr13:49792438:- chr13:49661208:- INFRAME NA TCGA-IC-A6RE-01A-11R-A336-31 CASP7-TRUB1 8 5 chr10:113697603:+ chr10:114942645:+ INFRAME NA TCGA-IG-A3I8-01A-11R-A24K-31 CTTN-KIRREL3 228 59 chr11:70398614:+ chr11:126473466:- . NA TCGA-IG-A3I8-01A-11R-A24K-31 DCPS-CCND1 74 38 chr11:126306744:+ chr11:69647994:+ INFRAME Likely Oncogenic NA TCGA-IG-A3I8-01A-11R-A24K-31 ST3GAL4-C11orf70 56 31 chr11:126409411:+ chr11:102058880:+ INFRAME NA TCGA-IG-A3I8-01A-11R-A24K-31 ST3GAL4-FGF19 31 19 chr11:126355842:+ chr11:69703364:- . NA TCGA-IG-A3I8-01A-11R-A24K-31 DCPS-YAP1 29 12 chr11:126306744:+ chr11:102162456:+ FRAMESHIFT Likely Oncogenic NA TCGA-IG-A3I8-01A-11R-A24K-31 ZNRF3-SLC5A1 15 1 chr22:28884066:+ chr22:32049943:+ INFRAME NA TCGA-IG-A3I8-01A-11R-A24K-31 CDON-CEP126 11 2 chr11:125960903:- chr11:101978347:+ . NA TCGA-IG-A4QS-01A-11R-A260-31 PRKCZ-LMNTD1 20 26 chr1:2059591:+ chr12:25549546:- FRAMESHIFT NA TCGA-IG-A4QS-01A-11R-A260-31 NDUFAF6-RALYL 5 7 chr8:94895927:+ chr8:84529299:+ . NA TCGA-IG-A50L-01A-11R-A260-31 ZNF217-MAVS 26 15 chr20:53571721:- chr20:3861332:+ . NA TCGA-IG-A51D-01A-11R-A36D-31 FUS-IL9R 6 7 chr16:31182664:+ chrY:57189426:+ INFRAME NA TCGA-IG-A5B8-01A-11R-A28J-31 BAZ2B-CFAP43 31 19 chr2:159616242:- chr10:104133784:- . NA TCGA-IG-A6QS-01A-12R-A336-31 LIN52-AHSA1 97 0 chr14:74084993:+ chr14:77462160:+ INFRAME NA TCGA-IG-A6QS-01A-12R-A336-31 ZNF526-CEACAMP10 34 9 chr19:42220387:+ chr19:43222958:- . NA TCGA-IG-A6QS-01A-12R-A336-31 CUX1-SH2B2 11 14 chr7:102205170:+ chr7:102308815:+ FRAMESHIFT NA TCGA-IG-A6QS-01A-12R-A336-31 TASP1-SEL1L2 11 5 chr20:13623446:- chr20:13850319:- INFRAME NA TCGA-IG-A8O2-01A-11R-A36D-31 EPC1-AKR1E2 47 17 chr10:32346763:- chr10:4830675:+ INFRAME NA TCGA-IG-A8O2-01A-11R-A36D-31 PARD3-NRXN1 46 13 chr10:34696318:- chr2:50091494:- INFRAME NA TCGA-IG-A8O2-01A-11R-A36D-31 BCL11A-HACD1 28 8 chr2:60545971:- chr10:17604047:- FRAMESHIFT NA TCGA-IG-A8O2-01A-11R-A36D-31 ZNF418-USP25 15 1 chr19:57930428:- chr21:15831401:+ FRAMESHIFT NA TCGA-IG-A8O2-01A-11R-A36D-31 MPP7-ZEB1 14 2 chr10:28202153:- chr10:31502348:+ FRAMESHIFT NA TCGA-IG-A8O2-01A-11R-A36D-31 EML4-EPHA3 13 3 chr2:42301392:+ chr3:89449225:+ INFRAME NA TCGA-IG-A8O2-01A-11R-A36D-31 ANXA4-MEIG1 3 11 chr2:69788141:+ chr10:14986796:+ . NA TCGA-IG-A97H-01A-11R-A38D-31 CHMP1A-FANCA 14 6 chr16:89657582:- chr16:89784964:- FRAMESHIFT Likely Oncogenic NA TCGA-IG-A97H-01A-11R-A38D-31 PPM1G-IFT172 12 7 chr2:27409303:- chr2:27459522:- FRAMESHIFT NA TCGA-IG-A97H-01A-11R-A38D-31 ACAP2-XXYLT1 8 4 chr3:195442795:- chr3:195070111:- INFRAME NA TCGA-JY-A6F8-01A-11R-A336-31 PVT1-ANXA13 79 56 chr8:127794734:+ chr8:123712753:- . NA TCGA-JY-A6F8-01A-11R-A336-31 SUSD6-SLC39A9 56 29 chr14:69703592:+ chr14:69442069:+ INFRAME NA TCGA-JY-A6F8-01A-11R-A336-31 FAF1-TESK2 41 8 chr1:50655442:- chr1:45355449:- INFRAME NA TCGA-JY-A6F8-01A-11R-A336-31 MIR1204-ANXA13 39 13 chr8:127796008:+ chr8:123712753:- . NA TCGA-JY-A6F8-01A-11R-A336-31 PAK2-DLG1 2 0 chr3:196740157:+ chr3:197194589:- . NA TCGA-JY-A6FB-01A-11R-A336-31 CD2AP-FAM69A 29 2 chr6:47478248:+ chr1:92876430:- FRAMESHIFT NA TCGA-JY-A6FB-01A-11R-A336-31 FOXP4-UBR2 18 10 chr6:41587897:+ chr6:42605721:+ INFRAME NA TCGA-JY-A6FB-01A-11R-A336-31 UBR1-TGM5 9 6 chr15:42998168:- chr15:43260579:- INFRAME NA TCGA-JY-A6FD-01A-11R-A336-31 DSP-LY86 1236 573 chr6:7542085:+ chr6:6649625:+ FRAMESHIFT NA TCGA-JY-A6FD-01A-11R-A336-31 NOV-ENPP2 360 120 chr8:119419345:+ chr8:119593860:- INFRAME NA TCGA-JY-A6FD-01A-11R-A336-31 KMT2D-ARF3 92 24 chr12:49049682:- chr12:48941188:- . Likely Oncogenic NA TCGA-JY-A6FD-01A-11R-A336-31 PPP2R2A-ATCAY 41 11 chr8:26293740:+ chr19:3913758:+ FRAMESHIFT NA TCGA-JY-A6FD-01A-11R-A336-31 IL4I1-DYRK1B 14 8 chr19:49927694:- chr19:39831968:- . NA TCGA-JY-A6FD-01A-11R-A336-31 NUP62-DYRK1B 14 8 chr19:49927694:- chr19:39831968:- . NA TCGA-JY-A6FD-01A-11R-A336-31 CAPG-GGCX 13 11 chr2:85399204:- chr2:85554306:- FRAMESHIFT NA TCGA-JY-A6FD-01A-11R-A336-31 PPP1R37-RTN2 10 11 chr19:45143633:+ chr19:45486113:- INFRAME NA TCGA-JY-A6FE-01A-11R-A336-31 EEA1-LRRIQ1 32 10 chr12:92929043:- chr12:85104004:+ FRAMESHIFT NA TCGA-JY-A6FE-01A-11R-A336-31 FTO-ZNF423 23 4 chr16:53704229:+ chr16:49525494:- FRAMESHIFT NA TCGA-JY-A6FE-01A-11R-A336-31 DENND5A-SCUBE2 15 6 chr11:9264961:- chr11:9122894:- . NA TCGA-JY-A6FH-01A-11R-A336-31 PUM1-YARS 197 92 chr1:31059204:- chr1:32811057:- INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 U2AF2-KIR3DL2 93 34 chr19:55659345:+ chr19:54851998:+ FRAMESHIFT NA TCGA-JY-A6FH-01A-11R-A336-31 TAX1BP1-CHN2 59 17 chr7:27787603:+ chr7:29354625:+ INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 DRAM1-SYCP3 50 19 chr12:101877920:+ chr12:101735044:- FRAMESHIFT NA TCGA-JY-A6FH-01A-11R-A336-31 PPP1R13B-L2HGDH 42 22 chr14:103847299:- chr14:50284033:- INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 CYB561D2-SLC38A3 37 30 chr3:50351560:+ chr3:50214149:+ . NA TCGA-JY-A6FH-01A-11R-A336-31 SMARCA4-SLC44A2 25 11 chr19:10996544:+ chr19:10634756:+ FRAMESHIFT Likely Oncogenic NA TCGA-JY-A6FH-01A-11R-A336-31 URI1-PDCD5 22 22 chr19:29942664:+ chr19:32582195:+ INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 AFAP1L2-GLUD1P2 26 5 chr10:114404440:- chr10:46772484:- . NA TCGA-JY-A6FH-01A-11R-A336-31 NELFB-FBXW5 21 14 chr9:137267346:+ chr9:136941684:- INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 SLC16A9-CCDC6 17 11 chr10:59709479:- chr10:59793111:- . NA TCGA-JY-A6FH-01A-11R-A336-31 PLEKHG5-KHDRBS1 16 10 chr1:6519445:- chr1:32030298:+ INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 LRRC37B-RAB11FIP4 16 3 chr17:32008132:+ chr17:31517651:+ INFRAME NA TCGA-JY-A6FH-01A-11R-A336-31 RABEP1-ZFP3 15 3 chr17:5332152:+ chr17:5091497:+ . NA TCGA-JY-A6FH-01A-11R-A336-31 TYW1-DMTF1 15 2 chr7:67117618:+ chr7:87166483:+ FRAMESHIFT NA TCGA-JY-A938-01A-11R-A37I-31 C3-ZNF556 28 8 chr19:6690629:- chr19:2873496:+ INFRAME NA TCGA-JY-A938-01A-11R-A37I-31 SLC2A12-SAMD3 12 6 chr6:134052378:- chr6:130313093:- . NA TCGA-JY-A938-01A-11R-A37I-31 PTPRK-ARHGAP18 11 2 chr6:128184432:- chr6:129618852:- FRAMESHIFT NA TCGA-JY-A93E-01A-11R-A37I-31 SPIDR-BLK 13 3 chr8:47294030:+ chr8:11543224:+ . NA TCGA-L5-A43C-01A-11R-A24K-31 MAGOHB-YBX3 15 3 chr12:10609831:- chr12:10713333:- INFRAME NA TCGA-L5-A43C-01A-11R-A24K-31 IMPA2-GNAL 11 2 chr18:11981765:+ chr18:11862395:+ FRAMESHIFT NA TCGA-L5-A43I-01A-11R-A24K-31 FDFT1-YWHAZ 100 7 chr8:11826215:+ chr8:100925039:- INFRAME NA TCGA-L5-A43I-01A-11R-A24K-31 NEMF-SOS2 25 3 chr14:49813988:- chr14:50145596:- FRAMESHIFT NA TCGA-L5-A43I-01A-11R-A24K-31 RHPN2-CLASRP 24 0 chr19:33026504:- chr19:45070537:+ FRAMESHIFT NA TCGA-L5-A43I-01A-11R-A24K-31 DNMT1-OLFM2 22 6 chr19:10135736:- chr19:9857861:- INFRAME NA TCGA-L5-A43I-01A-11R-A24K-31 NADSYN1-SPAG9 22 6 chr11:71482025:+ chr17:50970856:- INFRAME NA TCGA-L5-A43I-01A-11R-A24K-31 ACTR2-GGACT 18 1 chr2:65269573:+ chr13:100530469:- . NA TCGA-L5-A43I-01A-11R-A24K-31 ZMYM2-LATS2 14 2 chr13:19960026:+ chr13:21046230:- . Likely Oncogenic NA TCGA-L5-A43J-01A-12R-A24K-31 PPP5C-AP2S1 37 19 chr19:46353989:+ chr19:46846142:- INFRAME NA TCGA-L5-A43J-01A-12R-A24K-31 PIN1-PDE4C 17 3 chr19:9838648:+ chr19:18233400:- . NA TCGA-L5-A4OF-01A-11R-A260-31 CARS-SLC22A18AS 157 25 chr11:3006879:- chr11:2888635:- FRAMESHIFT NA TCGA-L5-A4OF-01A-11R-A260-31 SNRPD1-OSBPL1A 35 13 chr18:21612443:+ chr18:24377535:- . NA TCGA-L5-A4OF-01A-11R-A260-31 AFF4-RPL34 18 31 chr5:132879677:- chr4:108620576:+ . NA TCGA-L5-A4OH-01A-11R-A260-31 NOS2-MYO18A 12 7 chr17:27798700:- chr17:29122253:- FRAMESHIFT NA TCGA-L5-A4OJ-01A-11R-A260-31 GATA4-TRIB1 17 6 chr8:11708928:+ chr8:125436006:+ FRAMESHIFT NA TCGA-L5-A4OJ-01A-11R-A260-31 USP8-TRPM7 2 0 chr15:50424514:+ chr15:50592626:- . NA TCGA-L5-A4OM-01A-11R-A260-31 ZNF519-PKP4 10 2 chr18:14124350:- chr2:158680488:+ FRAMESHIFT NA TCGA-L5-A4ON-01A-11R-A260-31 SEC23B-KAT14 68 20 chr20:18515736:+ chr20:18181710:+ INFRAME NA TCGA-L5-A4OO-01A-11R-A260-31 DNAH11-IGKJ4 916 0 chr7:21738821:+ chr2:88860921:- FRAMESHIFT NA TCGA-L5-A4OO-01A-11R-A260-31 CTNND1-CLPB 39 18 chr11:57810223:+ chr11:72380384:- INFRAME NA TCGA-L5-A4OO-01A-11R-A260-31 ATP8A1-SHISA3 17 5 chr4:42522160:- chr4:42401012:+ FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 HOXD11-CIR1 156 25 chr2:176109358:+ chr2:174351725:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 HOXD10-CIR1 156 23 chr2:176109358:+ chr2:174351725:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 FAM102A-WDR93 139 24 chr9:127953575:- chr15:89743292:+ FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 TRPC4AP-RBM39 130 29 chr20:35069296:- chr20:35716805:- INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 CTNNA1-EGR1 128 23 chr5:138827718:+ chr5:138466757:+ FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 FAM118A-UPK3A 97 38 chr22:45310183:+ chr22:45293181:+ . NA TCGA-L5-A4OQ-01A-11R-A260-31 TATDN2-FANCD2 55 40 chr3:10249614:+ chr3:10101188:+ INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 WIPF1-CIR1 59 16 chr2:174597601:- chr2:174351725:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 CHN1-HOXD-AS2 50 18 chr2:174846931:- chr2:176136999:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 ACACA-LASP1 47 26 chr17:37179262:- chr17:38878084:+ . NA TCGA-L5-A4OQ-01A-11R-A260-31 DOCK6-C3P1 46 17 chr19:11213176:- chr19:10073917:+ . NA TCGA-L5-A4OQ-01A-11R-A260-31 MACROD1-BAD 40 8 chr11:64151239:- chr11:64284376:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 USP32-RBFOX3 39 5 chr17:60345481:- chr17:79307824:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 UBA2-MIER2 35 9 chr19:34450364:+ chr19:334542:- INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 EPHB2-ZBTB40 30 7 chr1:22785076:+ chr1:22517300:+ INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 SPPL2B-DOT1L 30 4 chr19:2334721:+ chr19:2232303:+ . NA TCGA-L5-A4OQ-01A-11R-A260-31 HOXD10-WIPF1 30 3 chr2:176119501:+ chr2:174597668:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 BAIAP2L2-TMEM184B 27 8 chr22:38097032:- chr22:38231334:- FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 NCOA6-TRPC4AP 26 12 chr20:34825472:- chr20:35049994:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 RAD54L-MAST2 25 4 chr1:46250119:+ chr1:46032596:+ INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 MYH14-GPR19 22 9 chr19:50210770:+ chr12:12695511:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 RHPN2-BRSK1 20 13 chr19:33064784:- chr19:55287007:+ FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 FAM222B-MYO18A 17 18 chr17:28842682:- chr17:29082438:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 TLK1-KCNH7 19 7 chr2:171117739:- chr2:162537080:- FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 VPS33A-ABCB9 18 2 chr12:122249871:- chr12:122950565:- INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 CBFB-NAE1 17 5 chr16:67036755:+ chr16:66823600:- INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 NUP214-ABL1 15 10 chr9:131151894:+ chr9:130872129:+ INFRAME Likely Oncogenic NA TCGA-L5-A4OQ-01A-11R-A260-31 HOXD3-CHN1 16 4 chr2:176136999:+ chr2:174812482:- . NA TCGA-L5-A4OQ-01A-11R-A260-31 PTPN4-CFAP221 14 4 chr2:119900806:+ chr2:119549085:+ FRAMESHIFT NA TCGA-L5-A4OQ-01A-11R-A260-31 SNX27-PIP5K1A 14 4 chr1:151683445:+ chr1:151239955:+ INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 COL27A1-ZNF618 14 2 chr9:114292210:+ chr9:113969117:+ INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 SMC3-MXI1 11 12 chr10:110590572:+ chr10:110279180:+ INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 CBL-PHLDB1 12 4 chr11:119206612:+ chr11:118613816:+ . Likely Oncogenic NA TCGA-L5-A4OQ-01A-11R-A260-31 SEC31A-FAM175A 11 6 chr4:82891088:- chr4:83482244:- INFRAME NA TCGA-L5-A4OQ-01A-11R-A260-31 RASSF3-TBK1 4 1 chr12:64610743:+ chr12:64480012:+ FRAMESHIFT NA TCGA-L5-A4OR-01A-11R-A260-31 EPC1-ARHGAP28 127 35 chr10:32291163:- chr18:6873409:+ INFRAME NA TCGA-L5-A4OR-01A-11R-A260-31 ARHGAP28-L3MBTL4 105 6 chr18:6873775:+ chr18:6301957:- INFRAME NA TCGA-L5-A4OR-01A-11R-A260-31 L3MBTL4-LDLRAD4 68 0 chr18:6301903:- chr18:13438244:+ INFRAME NA TCGA-L5-A4OR-01A-11R-A260-31 PTGES3-SPATS2 19 5 chr12:56687998:- chr12:49514555:+ INFRAME NA TCGA-L5-A4OR-01A-11R-A260-31 BLM-CRAT37 9 10 chr15:90717440:+ chr15:91473221:+ . NA TCGA-L5-A4OS-01A-11R-A28J-31 NOM1-RNF32 80 40 chr7:156954298:+ chr7:156675696:+ INFRAME NA TCGA-L5-A4OS-01A-11R-A28J-31 JUP-KLHL11 58 30 chr17:41762983:- chr17:41855321:- FRAMESHIFT NA TCGA-L5-A4OS-01A-11R-A28J-31 NSMF-ZMYND19 51 24 chr9:137452365:- chr9:137582686:- INFRAME NA TCGA-L5-A4OS-01A-11R-A28J-31 CBL-TRAPPC4 35 32 chr11:119287946:+ chr11:119023321:+ INFRAME Likely Oncogenic NA TCGA-L5-A4OS-01A-11R-A28J-31 STAT2-ANKRD52 37 5 chr12:56360058:- chr12:56248870:- . NA TCGA-L5-A4OS-01A-11R-A28J-31 SNAPC4-ABCA2 37 3 chr9:136400134:- chr9:137024236:- . NA TCGA-L5-A4OS-01A-11R-A28J-31 SMURF1-CFLAR 32 17 chr7:99143726:- chr2:201129729:+ . NA TCGA-L5-A4OS-01A-11R-A28J-31 MAFF-RCOR1 20 8 chr22:38202212:+ chr14:102681895:+ . NA TCGA-L5-A4OS-01A-11R-A28J-31 ACOT7-PLEKHG5 16 11 chr1:6281102:- chr1:6496569:- FRAMESHIFT NA TCGA-L5-A4OS-01A-11R-A28J-31 KIAA0368-C9orf84 17 6 chr9:111472897:- chr9:111748199:- INFRAME NA TCGA-L5-A4OS-01A-11R-A28J-31 ACTL8-ACOX1 16 8 chr1:17755504:+ chr17:75978693:- . NA TCGA-L5-A4OS-01A-11R-A28J-31 PHF21A-LEUTX 16 7 chr11:46120935:- chr19:39784527:+ . NA TCGA-L5-A4OS-01A-11R-A28J-31 CRAMP1-IFT140 13 5 chr16:1614985:+ chr16:1571534:- FRAMESHIFT NA TCGA-L5-A4OS-01A-11R-A28J-31 ANKFY1-CCDC88C 13 3 chr17:4242256:- chr14:91291084:- INFRAME NA TCGA-L5-A4OS-01A-11R-A28J-31 SEPT11-GARNL3 12 3 chr4:77015017:+ chr9:127243079:+ . NA TCGA-L5-A4OS-01A-11R-A28J-31 GRB2-PADI1 11 6 chr17:75321659:- chr1:17244010:+ INFRAME NA TCGA-L5-A4OS-01A-11R-A28J-31 CACNA1D-GNL3 9 11 chr3:53770552:+ chr3:52690592:+ FRAMESHIFT NA TCGA-L5-A4OS-01A-11R-A28J-31 TSEN54-TMEM94 11 3 chr17:75523779:+ chr17:75489576:+ FRAMESHIFT NA TCGA-L5-A4OS-01A-11R-A28J-31 FAM200A-CYP3A5 9 6 chr7:99551854:- chr7:99667065:- . NA TCGA-L5-A4OS-01A-11R-A28J-31 COL27A1-ZNF618 9 3 chr9:114237715:+ chr9:113988321:+ FRAMESHIFT NA TCGA-L5-A4OS-01A-11R-A28J-31 RAF1-C9orf153 5 17 chr3:12587591:- chr9:86235107:- . Likely Oncogenic NA TCGA-L5-A4OS-01A-11R-A28J-31 EIF3L-TRIOBP 7 6 chr22:37878171:+ chr22:37710427:+ INFRAME NA TCGA-L5-A4OS-01A-11R-A28J-31 CDH3-C16orf70 3 13 chr16:68645750:+ chr16:67120112:+ INFRAME NA TCGA-L5-A4OT-01A-11R-A28J-31 STK3-COX6C 76 21 chr8:98706467:- chr8:99887618:- INFRAME NA TCGA-L5-A4OT-01A-11R-A28J-31 MAPKAPK5-TRAFD1 17 12 chr12:111871180:+ chr12:112130511:+ . NA TCGA-L5-A4OU-01A-11R-A28J-31 ATAD5-IKZF3 79 16 chr17:30869646:+ chr17:39766493:- INFRAME NA TCGA-L5-A4OU-01A-11R-A28J-31 CAPZA2-STYXL1 19 12 chr7:116888190:+ chr7:76028703:- INFRAME NA TCGA-L5-A4OU-01A-11R-A28J-31 MICALL2-ZFAND2A 18 7 chr7:1459184:- chr7:1158257:- . NA TCGA-L5-A4OU-01A-11R-A28J-31 TMEM60-HIP1 12 2 chr7:77798254:- chr7:75549001:- . NA TCGA-L5-A4OU-01A-11R-A28J-31 HIPK2-CPSF4 11 1 chr7:139777605:- chr7:99444789:+ INFRAME NA TCGA-L5-A4OW-01A-11R-A28J-31 PGS1-BPTF 176 41 chr17:78404089:+ chr17:67920015:+ INFRAME NA TCGA-L5-A4OW-01A-11R-A28J-31 KANSL1-GAST 82 86 chr17:46223671:- chr17:41715432:+ . NA TCGA-L5-A4OW-01A-11R-A28J-31 SEPT9-BAIAP2 87 27 chr17:77307197:+ chr17:81115770:+ FRAMESHIFT NA TCGA-L5-A4OW-01A-11R-A28J-31 TBCD-CCDC57 86 27 chr17:82814934:+ chr17:82101866:- INFRAME NA TCGA-L5-A4OW-01A-11R-A28J-31 STAT3-NOS2 81 17 chr17:42388279:- chr17:27789688:- . NA TCGA-L5-A4OW-01A-11R-A28J-31 JUP-TTLL6 66 20 chr17:41768969:- chr17:48787999:- INFRAME NA TCGA-L5-A4OW-01A-11R-A28J-31 ETV4-TCAP 56 10 chr17:43532674:- chr17:39665716:+ FRAMESHIFT NA TCGA-L5-A4OW-01A-11R-A28J-31 TTLL6-NOS2 32 20 chr17:48784923:- chr17:27789688:- FRAMESHIFT NA TCGA-L5-A4OW-01A-11R-A28J-31 KRIT1-CDK6 33 0 chr7:92242034:- chr7:92618207:- FRAMESHIFT NA TCGA-L5-A4OW-01A-11R-A28J-31 MBOAT1-TPMT 17 3 chr6:20212136:- chr6:18149171:- . NA TCGA-L5-A4OW-01A-11R-A28J-31 TPMT-BTBD9 15 4 chr6:18148988:- chr6:38345093:- INFRAME NA TCGA-L5-A4OW-01A-11R-A28J-31 CWC25-LPCAT1 14 1 chr17:38806297:- chr5:1489858:- FRAMESHIFT NA TCGA-L5-A4OW-01A-11R-A28J-31 FBXL20-CDK12 10 5 chr17:39401361:- chr17:39501250:+ FRAMESHIFT Likely Oncogenic NA TCGA-L5-A4OX-01A-21R-A28J-31 PDXK-KLF10 36 4 chr21:43734123:+ chr8:102652397:- FRAMESHIFT NA TCGA-L5-A4OX-01A-21R-A28J-31 STAT5B-NSRP1 28 4 chr17:42276248:- chr17:30172542:+ . NA TCGA-L5-A4OX-01A-21R-A28J-31 DYRK1A-DENND3 11 5 chr21:37367628:+ chr8:141175200:+ . NA TCGA-L5-A88S-01A-11R-A36D-31 FNDC3B-TNIK 29 16 chr3:172133546:+ chr3:171347218:- FRAMESHIFT NA TCGA-L5-A88S-01A-11R-A36D-31 PHC3-NCEH1 18 8 chr3:170113360:- chr3:172648114:- FRAMESHIFT NA TCGA-L5-A88S-01A-11R-A36D-31 PHC3-FNDC3B 17 8 chr3:170113360:- chr3:172397164:+ FRAMESHIFT NA TCGA-L5-A88V-01A-11R-A354-31 ERBB2-PSMB3 11613 4425 chr17:39719834:+ chr17:38760431:+ INFRAME NA TCGA-L5-A88V-01A-11R-A354-31 GRB7-PIP4K2B 1281 358 chr17:39742716:+ chr17:38771272:- INFRAME NA TCGA-L5-A88V-01A-11R-A354-31 STARD3-FBXL20 62 14 chr17:39637231:+ chr17:39303639:- . NA TCGA-L5-A88V-01A-11R-A354-31 CDK12-NEUROD2 12 4 chr17:39492890:+ chr17:39608065:- . Likely Oncogenic NA TCGA-L5-A88Y-01A-11R-A354-31 ADGRF2-TNFRSF21 37 25 chr6:47663577:+ chr6:47253521:- . NA TCGA-L5-A88Y-01A-11R-A354-31 PLEKHA1-CYP2C19 28 12 chr10:122400388:+ chr10:94842837:+ INFRAME NA TCGA-L5-A88Y-01A-11R-A354-31 ATAT1-PPP1R18 13 2 chr6:30628430:+ chr6:30686575:- . NA TCGA-L5-A891-01A-11R-A36D-31 MAP1S-CEACAM6 920 767 chr19:17724208:+ chr19:41766183:+ FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 ARID3A-PRPF31 289 143 chr19:932742:+ chr19:54131307:+ INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 FBXO46-ZNF90 210 12 chr19:45730849:- chr19:20105221:+ . NA TCGA-L5-A891-01A-11R-A36D-31 B9D2-REEP6 118 63 chr19:41363432:- chr19:1495294:+ INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 PRKD2-KLHL26 68 35 chr19:46700799:- chr19:18667664:+ INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 ZBTB21-TFF1 43 114 chr21:42010252:- chr21:42363407:- . NA TCGA-L5-A891-01A-11R-A36D-31 DAZAP1-ZNF226 60 29 chr19:1422396:+ chr19:44174984:+ INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 LAMA5-OR7E28P 50 32 chr20:62351704:- chr2:158862406:+ . NA TCGA-L5-A891-01A-11R-A36D-31 CARM1-PLA2G4C 47 41 chr19:10871922:+ chr19:48055049:- INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 LAMA5-DAPL1 45 32 chr20:62351704:- chr2:158862406:+ . NA TCGA-L5-A891-01A-11R-A36D-31 DNAJB1-TRPM4 33 9 chr19:14527687:- chr19:49200300:+ . NA TCGA-L5-A891-01A-11R-A36D-31 ZNF542P-ANGPTL6 28 16 chr19:56368936:+ chr19:10094938:- . NA TCGA-L5-A891-01A-11R-A36D-31 GATAD2A-ZNF350 27 19 chr19:19386138:+ chr19:51974531:- . NA TCGA-L5-A891-01A-11R-A36D-31 GIPR-RBM42 25 18 chr19:45670734:+ chr19:35637158:+ INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 SUPT5H-ZSCAN5A 23 18 chr19:39476313:+ chr19:56225048:- . NA TCGA-L5-A891-01A-11R-A36D-31 OLA1-GPR155 20 9 chr2:174223033:- chr2:174461672:- INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 PIP5K1B-PGM5 17 7 chr9:68876794:+ chr9:68479418:+ FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 R3HDM4-JAK3 14 15 chr19:913087:- chr19:17843172:- FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 LSR-NLRP2 14 10 chr19:35250659:+ chr19:54969999:+ . NA TCGA-L5-A891-01A-11R-A36D-31 WASF2-FGR 15 6 chr1:27489986:- chr1:27625151:- . NA TCGA-L5-A891-01A-11R-A36D-31 EVI5L-PTPRS 15 2 chr19:7850122:+ chr19:5225844:- INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 ZNF417-CNFN 14 2 chr19:57916379:- chr19:42389039:- . NA TCGA-L5-A891-01A-11R-A36D-31 ASXL1-TPX2 12 7 chr20:32369123:+ chr20:31771560:+ FRAMESHIFT Likely Oncogenic NA TCGA-L5-A891-01A-11R-A36D-31 PTPRS-MBD3 12 6 chr19:5211590:- chr19:1582712:- FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 PROSC-TTLL10 11 3 chr8:37776016:+ chr1:1179189:+ . NA TCGA-L5-A891-01A-11R-A36D-31 ZNF541-C19orf68 10 7 chr19:47544126:- chr19:48194653:+ INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 HKR1-CEACAM7 10 6 chr19:37347872:+ chr19:41687221:- INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 CARD8-MYH14 9 9 chr19:48255792:- chr19:50248987:+ . NA TCGA-L5-A891-01A-11R-A36D-31 ADGRL1-LGALS4 10 4 chr19:14170707:- chr19:38813141:- . NA TCGA-L5-A891-01A-11R-A36D-31 SIM2-MORC3 9 6 chr21:36731151:+ chr21:36349311:+ FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 ATAD3B-INTS11 9 2 chr1:1472089:+ chr1:1315618:- FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 KLF9-FOXRED2 9 2 chr9:70412859:- chr22:36493803:- INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 NCOA7-NKAIN2 7 10 chr6:125791067:+ chr6:124791339:+ . NA TCGA-L5-A891-01A-11R-A36D-31 ZNF790-C19orf45 7 6 chr19:36850002:- chr19:7505324:+ . NA TCGA-L5-A891-01A-11R-A36D-31 HK2-ZNF121 7 4 chr2:74874449:+ chr19:9569082:- . NA TCGA-L5-A891-01A-11R-A36D-31 R3HCC1-GRIK5 6 7 chr8:23290469:+ chr19:42022354:- INFRAME NA TCGA-L5-A891-01A-11R-A36D-31 PPP1R13L-MBOAT7 5 8 chr19:45382527:- chr19:54174431:- FRAMESHIFT NA TCGA-L5-A891-01A-11R-A36D-31 ZNF614-FXYD5 4 7 chr19:52015643:- chr19:35169566:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 DVL1-CCNL2 81 65 chr1:1335620:- chr1:1388510:- . NA TCGA-L5-A8NE-01A-11R-A37I-31 CEP170B-AUNIP 81 25 chr14:104865513:+ chr1:25837554:- . NA TCGA-L5-A8NE-01A-11R-A37I-31 MIR762HG-PKIG 59 20 chr16:30876118:+ chr20:44589797:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 FA2H-KARS 58 13 chr16:74740023:- chr16:75631855:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 SPSB3-ECI1 55 11 chr16:1782502:- chr16:2243224:- . NA TCGA-L5-A8NE-01A-11R-A37I-31 POLR3H-FAM87B 45 7 chr22:41540699:- chr1:818723:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 CCT4-BIRC6 39 22 chr2:61880286:- chr2:32531355:+ INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 ROCK1-CIDEA 33 6 chr18:21111475:- chr18:12262825:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 ZDHHC3-CDCP1 29 10 chr3:44917910:- chr3:45089141:- FRAMESHIFT NA TCGA-L5-A8NE-01A-11R-A37I-31 PLEKHA7-USH1C 28 12 chr11:17013989:- chr11:17501980:- FRAMESHIFT NA TCGA-L5-A8NE-01A-11R-A37I-31 IP6K1-UBA7 27 10 chr3:49786354:- chr3:49810183:- . NA TCGA-L5-A8NE-01A-11R-A37I-31 PPFIA1-XRRA1 26 11 chr11:70272436:+ chr11:74848462:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 FAM83G-B9D1 26 7 chr17:18988247:- chr17:19357951:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 PLEKHA7-KHDC3L 23 7 chr11:17013989:- chr6:73362717:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 FBXW5-ENTPD2 22 6 chr9:136941343:- chr9:137052348:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 AK4-NDC1 20 6 chr1:65190829:+ chr1:53828173:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 SLC25A20-SLC26A6 19 10 chr3:48898690:- chr3:48626685:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 PLPP2-CDC34 19 3 chr19:281358:- chr19:535837:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 PSMG2-OSBPL1A 15 10 chr18:12703164:+ chr18:24334330:- FRAMESHIFT NA TCGA-L5-A8NE-01A-11R-A37I-31 TIA1-SNRPG 14 5 chr2:70216208:- chr2:70281684:- INFRAME NA TCGA-L5-A8NE-01A-11R-A37I-31 DTNB-ASXL2 12 5 chr2:25596086:- chr2:25768868:- INFRAME Likely Oncogenic NA TCGA-L5-A8NE-01A-11R-A37I-31 GNAI2-SLC38A3 11 7 chr3:50236453:+ chr3:50214149:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 PGM2L1-PRNCR1 11 7 chr11:74398051:- chr8:127086764:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 PDLIM2-SORBS3 10 6 chr8:22591668:+ chr8:22554452:+ . NA TCGA-L5-A8NE-01A-11R-A37I-31 KHDC1-SLC17A5 9 8 chr6:73291998:- chr6:73615447:- FRAMESHIFT NA TCGA-L5-A8NF-01A-11R-A37I-31 RBM39-C22orf24 231 130 chr20:35738968:- chr22:31938115:- . NA TCGA-L5-A8NF-01A-11R-A37I-31 BAIAP2L1-ANKIB1 35 19 chr7:98304196:- chr7:92294889:+ . NA TCGA-L5-A8NF-01A-11R-A37I-31 TBC1D15-PTPRR 20 10 chr12:71873003:+ chr12:70892977:- FRAMESHIFT NA TCGA-L5-A8NF-01A-11R-A37I-31 CORO2A-NCBP1 14 8 chr9:98122653:- chr9:97640794:+ . NA TCGA-L5-A8NF-01A-11R-A37I-31 PPP3CB-USP54 12 3 chr10:73444725:- chr10:73505426:- INFRAME NA TCGA-L5-A8NF-01A-11R-A37I-31 RANGAP1-POLR3H 6 11 chr22:41284901:- chr22:41533687:- . NA TCGA-L5-A8NF-01A-11R-A37I-31 ITGA7-MSRB3 5 7 chr12:55715919:- chr12:65326826:+ . NA TCGA-L5-A8NG-01A-11R-A37I-31 RBM33-TMEM120A 105 41 chr7:155644919:+ chr7:75989224:- FRAMESHIFT NA TCGA-L5-A8NG-01A-11R-A37I-31 MED24-NR1D1 38 7 chr17:40021955:- chr17:40097403:- INFRAME NA TCGA-L5-A8NG-01A-11R-A37I-31 ECSIT-RGL3 23 10 chr19:11513056:- chr19:11397597:- INFRAME NA TCGA-L5-A8NG-01A-11R-A37I-31 FBL-ZNF829 11 7 chr19:39836556:- chr19:36915251:- INFRAME NA TCGA-L5-A8NH-01A-11R-A37I-31 FAM134C-AP2B1 65 23 chr17:42586765:- chr17:35674176:+ INFRAME NA TCGA-L5-A8NH-01A-11R-A37I-31 CPT1A-RNFT1 63 23 chr11:68759569:- chr17:59954146:- INFRAME NA TCGA-L5-A8NH-01A-11R-A37I-31 PTP4A1-NOTCH3 18 4 chr6:63572719:+ chr19:15170170:- FRAMESHIFT NA TCGA-L5-A8NH-01A-11R-A37I-31 ATP6V0A1-STAT3 14 4 chr17:42514460:+ chr17:42346713:- INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 ACP7-ACTN4 278 79 chr19:39085390:+ chr19:38704934:+ INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 MSH2-EPCAM 143 56 chr2:47403402:+ chr2:47385166:+ FRAMESHIFT Likely Oncogenic NA TCGA-L5-A8NI-01A-11R-A37I-31 IST1-DHX38 121 32 chr16:71895589:+ chr16:72096139:+ . NA TCGA-L5-A8NI-01A-11R-A37I-31 KDM5A-NINJ2 70 10 chr12:320995:- chr12:566178:- INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 KMT5B-RNPS1 53 34 chr11:68213477:- chr16:2255726:- . NA TCGA-L5-A8NI-01A-11R-A37I-31 GOLPH3-IKZF3 42 22 chr5:32173810:- chr17:39788374:- FRAMESHIFT NA TCGA-L5-A8NI-01A-11R-A37I-31 RAB6A-TPCN2 43 18 chr11:73760566:- chr11:69159446:+ . NA TCGA-L5-A8NI-01A-11R-A37I-31 WNK2-SUSD3 39 18 chr9:93268746:+ chr9:93075784:+ INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 ZNF292-SLC35A1 40 9 chr6:87155759:+ chr6:87500508:+ FRAMESHIFT NA TCGA-L5-A8NI-01A-11R-A37I-31 FAM102A-EMSY 30 26 chr9:127979992:- chr11:76544259:+ FRAMESHIFT NA TCGA-L5-A8NI-01A-11R-A37I-31 KMT2C-SND1 34 9 chr7:152435626:- chr7:127807484:+ FRAMESHIFT Likely Oncogenic NA TCGA-L5-A8NI-01A-11R-A37I-31 RELB-ZNF227 28 5 chr19:45028992:+ chr19:44234702:+ INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 TRIM14-CORO2A 26 6 chr9:98118982:- chr9:98137688:- INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 NISCH-DNAH1 24 7 chr3:52458844:+ chr3:52379905:+ INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 MUC5AC-IRF8 19 9 chr11:1175270:+ chr16:85908990:+ INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 PPP2R2A-MATR3 20 3 chr8:26293740:+ chr5:139314675:+ FRAMESHIFT NA TCGA-L5-A8NI-01A-11R-A37I-31 ETHE1-PLAUR 18 10 chr19:43526515:- chr19:43655573:- INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 USF2-ZNF30 17 8 chr19:35270003:+ chr19:34942594:+ FRAMESHIFT NA TCGA-L5-A8NI-01A-11R-A37I-31 THRAP3-ARHGEF10L 15 6 chr1:36224505:+ chr1:17580553:+ . NA TCGA-L5-A8NI-01A-11R-A37I-31 SHROOM3-LUC7L 12 6 chr4:76586469:+ chr16:208188:- . NA TCGA-L5-A8NI-01A-11R-A37I-31 KIAA1671-CNIH3 11 6 chr22:25049364:+ chr1:224680958:+ INFRAME NA TCGA-L5-A8NI-01A-11R-A37I-31 TBC1D14-MRFAP1 10 5 chr4:6924111:+ chr4:6640828:+ . NA TCGA-L5-A8NI-01A-11R-A37I-31 TMEM160-ZC3H4 10 4 chr19:47046593:- chr19:47082295:- FRAMESHIFT NA TCGA-L5-A8NJ-01A-11R-A36D-31 LAMA3-APOBEC1 58 7 chr18:23939386:+ chr12:7652835:- INFRAME NA TCGA-L5-A8NJ-01A-11R-A36D-31 SENP5-PAK2 26 0 chr3:196868073:+ chr3:196827196:+ . NA TCGA-L5-A8NL-01A-12R-A37I-31 SLFN13-APBA3 21 1 chr17:35439075:- chr19:3751774:- . NA TCGA-L5-A8NL-01A-12R-A37I-31 BCAS3-SCN4A 14 0 chr17:61084564:+ chr17:63961431:- INFRAME NA TCGA-L5-A8NL-01A-12R-A37I-31 TANC2-TSHZ2 13 2 chr17:63319090:+ chr20:53487144:+ . NA TCGA-L5-A8NL-01A-12R-A37I-31 PTPN2-L3MBTL4 13 1 chr18:12814203:- chr18:5969562:- FRAMESHIFT NA TCGA-L5-A8NR-01A-11R-A37I-31 REEP3-RTKN2 9 6 chr10:63599283:+ chr10:62246057:- FRAMESHIFT NA TCGA-L5-A8NS-01A-12R-A37I-31 DTX4-FAM111B 14 5 chr11:59199773:+ chr11:59124179:+ INFRAME NA TCGA-L5-A8NS-01A-12R-A37I-31 MIDN-C19orf38 12 4 chr19:1255694:+ chr19:10848441:+ . NA TCGA-L5-A8NS-01A-12R-A37I-31 ARAP1-IL12RB2 9 1 chr11:72693325:- chr1:67350870:+ INFRAME NA TCGA-L5-A8NS-01A-12R-A37I-31 MAN1C1-CFAP46 7 3 chr1:25749335:+ chr10:132872824:- INFRAME NA TCGA-L5-A8NS-01A-12R-A37I-31 AAMDC-TMEM135 4 7 chr11:77821241:+ chr11:87295782:+ . NA TCGA-L5-A8NT-01A-11R-A37I-31 NRP2-KLF7 190 127 chr2:205766803:+ chr2:207088581:- INFRAME NA TCGA-L5-A8NU-01A-11R-A36D-31 TMC5-GPRC5B 26 2 chr16:19497163:+ chr16:19871950:- INFRAME NA TCGA-L5-A8NV-01A-11R-A37I-31 MAP2K4-DNAH9 15 1 chr17:12021001:+ chr17:11923814:+ INFRAME Likely Oncogenic NA TCGA-L5-A8NW-01A-11R-A37I-31 ORC2-RPLP2 21 0 chr2:200925836:- chr11:809992:+ . NA TCGA-L5-A8NW-01A-11R-A37I-31 CDK8-ATP8A2 11 4 chr13:26353880:+ chr13:25828118:+ INFRAME NA TCGA-L7-A6VZ-01A-12R-A336-31 CHMP3-CD8A 42 10 chr2:86529218:- chr2:86801657:- . NA TCGA-L7-A6VZ-01A-12R-A336-31 TBC1D12-CYP2C18 12 2 chr10:94497172:+ chr10:94687770:+ FRAMESHIFT NA TCGA-LN-A49L-01A-11R-A24K-31 LRFN3-FXYD7 159 59 chr19:35937555:+ chr19:35148694:+ . NA TCGA-LN-A49L-01A-11R-A24K-31 PUM1-SDC3 109 42 chr1:31059204:- chr1:30878740:- INFRAME NA TCGA-LN-A49L-01A-11R-A24K-31 PTPN12-RHBDD2 83 61 chr7:77537645:+ chr7:75881365:+ INFRAME NA TCGA-LN-A49L-01A-11R-A24K-31 NEDD8-NRL 53 56 chr14:24232250:- chr14:24081568:- INFRAME NA TCGA-LN-A49L-01A-11R-A24K-31 C16orf70-DNAAF1 36 5 chr16:67110239:+ chr16:84159675:+ FRAMESHIFT NA TCGA-LN-A49L-01A-11R-A24K-31 BRCC3-FAM50A 29 19 chrX:155078703:+ chrX:154445633:+ FRAMESHIFT NA TCGA-LN-A49L-01A-11R-A24K-31 CAMK1D-ECHDC3 24 10 chr10:12349910:+ chr10:11747349:+ INFRAME NA TCGA-LN-A49L-01A-11R-A24K-31 CHD7-KAT6A 23 5 chr8:60679082:+ chr8:41987563:- . NA TCGA-LN-A49L-01A-11R-A24K-31 N4BP1-ABCC12 21 10 chr16:48560754:- chr16:48133835:- FRAMESHIFT NA TCGA-LN-A49L-01A-11R-A24K-31 GALNT11-ABCB8 9 7 chr7:152121904:+ chr7:151033605:+ . NA TCGA-LN-A49M-01A-21R-A260-31 NLN-CTNNA1 75 29 chr5:65785830:+ chr5:138930583:+ INFRAME NA TCGA-LN-A49M-01A-21R-A260-31 AFF4-SPATA21 7 8 chr5:132963259:- chr1:16431422:- . NA TCGA-LN-A49O-01A-11R-A24K-31 TUBA1C-IGFBP4 43 9 chr12:49269976:+ chr17:40452985:+ FRAMESHIFT NA TCGA-LN-A49O-01A-11R-A24K-31 SLC24A3-RIN2 30 4 chr20:19281087:+ chr20:19990006:+ INFRAME NA TCGA-LN-A49O-01A-11R-A24K-31 CASP8-STRADB 10 7 chr2:201234112:+ chr2:201469953:+ . Likely Oncogenic NA TCGA-LN-A49P-01A-11R-A24K-31 KIF16B-CCDC178 12 3 chr20:16371665:- chr18:32974681:- INFRAME NA TCGA-LN-A49R-01A-11R-A24K-31 CNBP-UNC93B6 39 3 chr3:129183776:- chr11:71605349:+ . NA TCGA-LN-A49R-01A-11R-A24K-31 THA1P-TP63 20 0 chr17:78250604:- chr3:189886394:+ . NA TCGA-LN-A49R-01A-11R-A24K-31 RNF217-NKAIN2 15 2 chr6:124963426:+ chr6:124791339:+ INFRAME NA TCGA-LN-A49U-01A-31R-A260-31 PTPN12-GSAP 10 7 chr7:77592256:+ chr7:77406105:- FRAMESHIFT NA TCGA-LN-A49W-01A-11R-A260-31 CLPB-GOLGA8B 26 5 chr11:72358880:- chr15:34553956:- . NA TCGA-LN-A49W-01A-11R-A260-31 SDK1-NUPR2 25 2 chr7:3642105:+ chr7:56114897:- . NA TCGA-LN-A49W-01A-11R-A260-31 SLTM-ADGRL1 19 1 chr15:58932356:- chr19:14177744:- INFRAME NA TCGA-LN-A49X-01A-31R-A260-31 C16orf59-CCNF 12 9 chr16:2462479:+ chr16:2458161:+ . NA TCGA-LN-A49X-01A-31R-A260-31 MIR4300HG-NRXN2 6 7 chr11:82356512:- chr11:64668604:- . NA TCGA-LN-A4A1-01A-21R-A260-31 CPEB4-SHISA5 15 2 chr5:173910604:+ chr3:48479257:- FRAMESHIFT NA TCGA-LN-A4A2-01A-31R-A260-31 BEND3-SNX3 12 5 chr6:107115090:- chr6:108223045:- . NA TCGA-LN-A4A2-01A-31R-A260-31 CAMKK2-KDM2B 5 0 chr12:121268638:- chr12:121453344:- FRAMESHIFT NA TCGA-LN-A4A3-01A-11R-A260-31 ZNF699-PCAT19 144 45 chr19:9296687:- chr19:41456084:- . NA TCGA-LN-A4A3-01A-11R-A260-31 GTPBP10-VPS50 12 1 chr7:90355230:+ chr7:93239866:+ FRAMESHIFT NA TCGA-LN-A4A9-01A-11R-A28J-31 ME1-UBE3D 5 6 chr6:83315310:- chr6:82957450:- INFRAME NA TCGA-LN-A4MQ-01A-11R-A28J-31 ALG12-IL17REL 14 7 chr22:49909894:- chr22:50008664:- . NA TCGA-LN-A4MQ-01A-11R-A28J-31 SEPT2-RHOH 7 5 chr2:241337790:+ chr4:40242714:+ . NA TCGA-LN-A4MQ-01A-11R-A28J-31 NOMO3-ABCC1 6 5 chr16:16270828:+ chr16:16044450:+ INFRAME NA TCGA-LN-A5U5-01A-21R-A28J-31 EIF2S1-GPHN 109 158 chr14:67360456:+ chr14:67110140:+ . NA TCGA-LN-A5U6-01A-11R-A28J-31 ITGA6-MYEOV 42 23 chr2:172427970:+ chr11:69341510:+ . NA TCGA-LN-A5U6-01A-11R-A28J-31 SYNE2-GEMIN2 18 13 chr14:63853143:+ chr14:39114829:+ . NA TCGA-LN-A5U6-01A-11R-A28J-31 SDHA-PLEKHG4B 18 6 chr5:233645:+ chr5:139483:+ FRAMESHIFT NA TCGA-LN-A5U7-01A-11R-A31P-31 GOLGB1-IQCB1 40 36 chr3:121749632:- chr3:121772713:- . NA TCGA-LN-A5U7-01A-11R-A31P-31 HIST1H2AE-CLVS2 37 23 chr6:26217053:+ chr6:122997312:+ . NA TCGA-LN-A5U7-01A-11R-A31P-31 MSH2-EPCAM 17 2 chr2:47416429:+ chr2:47368928:+ . Likely Oncogenic NA TCGA-LN-A5U7-01A-11R-A31P-31 ZFP3-PCCB 3 13 chr17:5078575:+ chr3:136255856:+ . NA TCGA-LN-A7HV-01A-21R-A354-31 GLMP-C1orf61 89 68 chr1:156294018:- chr1:156404601:- INFRAME NA TCGA-LN-A7HV-01A-21R-A354-31 ST3GAL3-PTPRF 29 12 chr1:43814933:+ chr1:43603416:+ FRAMESHIFT NA TCGA-LN-A7HV-01A-21R-A354-31 NDRG1-C9 24 18 chr8:133280234:- chr5:39342198:- . NA TCGA-LN-A7HV-01A-21R-A354-31 RAB9A-EGFL6 14 7 chrX:13703902:+ chrX:13617730:+ . NA TCGA-LN-A7HV-01A-21R-A354-31 PKNOX1-NDUFV3 8 3 chr21:43024947:+ chr21:42908864:+ FRAMESHIFT NA TCGA-LN-A7HV-01A-21R-A354-31 PDZD2-KCNB2 5 6 chr5:32053883:+ chr8:72935935:+ FRAMESHIFT NA TCGA-LN-A7HX-01A-11R-A336-31 ATP7B-KLF5 39 12 chr13:52011287:- chr13:73061861:+ INFRAME NA TCGA-LN-A7HY-01A-12R-A354-31 EIF3B-LYPD8 30 45 chr7:2364529:+ chr1:248751130:- . NA TCGA-LN-A7HY-01A-12R-A354-31 EEF2K-MFSD13B 20 9 chr16:22225975:+ chr16:22402692:+ . NA TCGA-LN-A7HY-01A-12R-A354-31 MAPK1-PI4KAP2 13 6 chr22:21867322:- chr22:21473405:- . NA TCGA-LN-A8HZ-01A-11R-A36D-31 WWP2-GSG1L 19 7 chr16:69799295:+ chr16:27845061:- INFRAME NA TCGA-LN-A8I0-01A-11R-A36D-31 CDIPT-SEZ6L2 16 5 chr16:29860581:- chr16:29873729:- FRAMESHIFT NA TCGA-LN-A8I0-01A-11R-A36D-31 CDK13-POU6F2 1 1 chr7:40002031:+ chr7:39433077:+ FRAMESHIFT NA TCGA-LN-A8I1-01A-11R-A36D-31 TBL1XR1-DCUN1D1 44 17 chr3:177197121:- chr3:182965753:- . NA TCGA-LN-A8I1-01A-11R-A36D-31 TBL1XR1-MCF2L2 28 11 chr3:177197121:- chr3:183389779:- . NA TCGA-LN-A8I1-01A-11R-A36D-31 JPX-GAGE10 11 0 chrX:73944662:+ chrX:49304852:+ . NA TCGA-LN-A8I1-01A-11R-A36D-31 JPX_2-GAGE10 11 0 chrX:73944662:+ chrX:49304852:+ . NA TCGA-LN-A8I1-01A-11R-A36D-31 SPTBN2-PC 10 3 chr11:66721084:- chr11:66872159:- FRAMESHIFT NA TCGA-LN-A9FO-01A-11R-A38D-31 IGHMBP2-CPT1A 22 2 chr11:68917883:+ chr11:68815487:- . NA TCGA-LN-A9FR-01A-11R-A38D-31 TXN-GNB1 46 11 chr9:110244778:- chr1:1789269:- INFRAME NA TCGA-LN-A9FR-01A-11R-A38D-31 GNB1-TXN 44 9 chr1:1790395:- chr9:110250864:- INFRAME NA TCGA-M9-A5M8-01A-11R-A28J-31 STARD3-RAB5C 57 20 chr17:39653750:+ chr17:42130590:- FRAMESHIFT NA TCGA-M9-A5M8-01A-11R-A28J-31 FAM135A-LAMA2 16 11 chr6:70452571:+ chr6:129049918:+ INFRAME NA TCGA-Q9-A6FU-01A-11R-A31P-31 SPIDR-POMGNT2 91 14 chr8:47291137:+ chr3:43081536:- . NA TCGA-Q9-A6FU-01A-11R-A31P-31 MEX3D-TCF3 27 6 chr19:1567464:- chr19:1646427:- FRAMESHIFT NA TCGA-Q9-A6FU-01A-11R-A31P-31 GAB1-PPP2R2C 23 7 chr4:143440382:+ chr4:6348010:- INFRAME NA TCGA-Q9-A6FU-01A-11R-A31P-31 USP37-TMBIM1 15 2 chr2:218474630:- chr2:218282181:- . NA TCGA-Q9-A6FW-01A-31R-A31P-31 DMBT1-ARMS2 88 45 chr10:122621380:+ chr10:122456907:+ FRAMESHIFT NA TCGA-Q9-A6FW-01A-31R-A31P-31 MEF2A-PLPPR1 5 8 chr15:99566104:+ chr9:101185450:+ . NA TCGA-R6-A6DN-01B-11R-A31P-31 EHF-BDNF 9 6 chr11:34651606:+ chr11:27658585:- INFRAME NA TCGA-R6-A6KZ-01A-11R-A31P-31 CTBP2-TLX1NB 23 9 chr10:125160319:- chr10:101127098:- . NA TCGA-R6-A6KZ-01A-11R-A31P-31 APLP2-OPCML 10 5 chr11:130070082:+ chr11:132437359:- FRAMESHIFT NA TCGA-R6-A6L6-01B-11R-A336-31 PVT1-FARP1 11 8 chr8:127794734:+ chr13:98424572:+ . NA TCGA-R6-A6XG-01B-11R-A336-31 KIF22-PRKCB 32 48 chr16:29790829:+ chr16:24032136:+ FRAMESHIFT NA TCGA-R6-A6XQ-01B-11R-A336-31 YAP1-USP2 8 3 chr11:102114394:+ chr11:119360234:- FRAMESHIFT Likely Oncogenic NA TCGA-R6-A6Y2-01B-11R-A336-31 NR2C2-PARL 125 51 chr3:14947906:+ chr3:183868060:- . NA TCGA-R6-A6Y2-01B-11R-A336-31 PLEKHM2-IGF2BP2 60 19 chr1:15719920:+ chr3:185692762:- INFRAME NA TCGA-R6-A6Y2-01B-11R-A336-31 TAF15-ZNHIT3 43 36 chr17:35809576:+ chr17:36492813:+ INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 BRD9-STARD3 1155 338 chr5:876101:- chr17:39657008:+ INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 AGRN-ZC3H18 229 47 chr1:1045523:+ chr16:88598178:+ INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 OSBP-GIF 182 29 chr11:59593604:- chr11:59829545:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 KIF13B-C20orf194 108 21 chr8:29155726:- chr20:3281766:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 ERBB2-IKZF3 95 32 chr17:39693325:+ chr17:39757965:- . NA TCGA-R6-A8W5-01B-11R-A37I-31 ETV4-LSM12 67 3 chr17:43532674:- chr17:44063934:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 SNAPIN-FMNL1 64 11 chr1:153659566:+ chr17:45240476:+ INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 EPN3-AGPAT3 59 18 chr17:50539315:+ chr21:43959634:+ . NA TCGA-R6-A8W5-01B-11R-A37I-31 XPO5-VARS 55 20 chr6:43525107:- chr6:31779814:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 WDR59-KARS 34 42 chr16:74948519:- chr16:75636547:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 UVRAG-SLCO2B1 28 18 chr11:75852000:+ chr11:75162655:+ INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 STAG3L5P-ZKSCAN1 24 3 chr7:100338264:+ chr7:100030249:+ . NA TCGA-R6-A8W5-01B-11R-A37I-31 ANKRD28-COLQ 21 2 chr3:15859377:- chr3:15489637:- FRAMESHIFT NA TCGA-R6-A8W5-01B-11R-A37I-31 DVL3-RFX6 21 2 chr3:184155796:+ chr6:116931331:+ FRAMESHIFT NA TCGA-R6-A8W5-01B-11R-A37I-31 IFFO2-UBR4 20 5 chr1:18916903:- chr1:19201815:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 SLC7A7-ACIN1 18 9 chr14:22812900:- chr14:23064488:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 PHF2-WNK2 18 5 chr9:93576871:+ chr9:93238233:+ FRAMESHIFT NA TCGA-R6-A8W5-01B-11R-A37I-31 SPOP-TSPEAR 16 3 chr17:49677933:- chr21:44533923:- . Likely Oncogenic NA TCGA-R6-A8W5-01B-11R-A37I-31 ASH2L-CENPU 12 2 chr8:38121149:+ chr4:184725062:- INFRAME NA TCGA-R6-A8W5-01B-11R-A37I-31 SRPK2-PUS7 9 1 chr7:105388648:- chr7:105482440:- INFRAME NA TCGA-R6-A8W8-01B-11R-A37I-31 TKT-CENPF 75 15 chr3:53240251:- chr1:214658871:+ FRAMESHIFT NA TCGA-R6-A8W8-01B-11R-A37I-31 PAPD7-SRD5A1 31 7 chr5:6714699:+ chr5:6662816:+ INFRAME NA TCGA-R6-A8W8-01B-11R-A37I-31 CASP7-UQCRB 18 11 chr10:113730687:+ chr8:96235537:- . NA TCGA-R6-A8W8-01B-11R-A37I-31 ZNF318-FOXP4 12 3 chr6:43348324:- chr6:41565745:+ . NA TCGA-R6-A8W8-01B-11R-A37I-31 AP2B1-GAS2L2 11 4 chr17:35657791:+ chr17:35750318:- FRAMESHIFT NA TCGA-R6-A8WG-01A-11R-A37I-31 CEP192-PIGU 18 6 chr18:13001582:+ chr20:34588607:- FRAMESHIFT NA TCGA-R6-A8WG-01A-11R-A37I-31 RNF123-CHMP2B 8 7 chr3:49714174:+ chr3:87245714:+ FRAMESHIFT NA TCGA-S8-A6BW-01A-11R-A31P-31 ANKS3-SEPT12 19 4 chr16:4724750:- chr16:4779786:- INFRAME NA TCGA-V5-A7RB-01A-11R-A354-31 UCHL3-KLF5 74 15 chr13:75560881:+ chr13:73062109:+ FRAMESHIFT NA TCGA-V5-A7RB-01A-11R-A354-31 MICALL2-CA3 65 19 chr7:1442192:- chr8:85442073:+ INFRAME NA TCGA-V5-A7RB-01A-11R-A354-31 NFE2L3-NPY 43 5 chr7:26153068:+ chr7:24285241:+ INFRAME NA TCGA-V5-A7RB-01A-11R-A354-31 ACAA2-MYO5B 32 11 chr18:49783879:- chr18:49826623:- FRAMESHIFT NA TCGA-V5-A7RB-01A-11R-A354-31 LRRFIP1-RAMP1 20 11 chr2:237760205:+ chr2:237877224:+ INFRAME NA TCGA-V5-A7RB-01A-11R-A354-31 PIGZ-MELTF 16 5 chr3:196968687:- chr3:197009812:- . NA TCGA-V5-A7RB-01A-11R-A354-31 NDUFA13-AZIN1 12 4 chr19:19516332:+ chr8:102839823:- FRAMESHIFT NA TCGA-V5-A7RB-01A-11R-A354-31 AZIN1-NDUFA13 12 3 chr8:102836256:- chr19:19526182:+ INFRAME NA TCGA-V5-A7RB-01A-11R-A354-31 ASAP1-FGF12 9 4 chr8:130358017:- chr3:192360538:- FRAMESHIFT NA TCGA-V5-A7RE-01A-11R-A354-31 ALDOA-BCAR4 139 243 chr16:30065927:+ chr16:11820297:- . NA TCGA-V5-A7RE-01A-11R-A354-31 MED13-MYO15B 103 76 chr17:62063067:- chr17:75610166:+ FRAMESHIFT NA TCGA-V5-A7RE-01A-11R-A354-31 MMD-HDAC5 60 38 chr17:55421670:- chr17:44088598:- FRAMESHIFT NA TCGA-V5-A7RE-01A-11R-A354-31 LLGL2-FAM222B 33 23 chr17:75559410:+ chr17:28766707:- . NA TCGA-V5-A7RE-01A-11R-A354-31 CDC27-CCT6B 23 26 chr17:47189146:- chr17:34954599:- INFRAME NA TCGA-V5-A7RE-01A-11R-A354-31 MAP3K3-DBF4B 26 12 chr17:63652656:+ chr17:44747083:+ FRAMESHIFT NA TCGA-V5-A7RE-01A-11R-A354-31 SMARCD2-STRADA 17 30 chr17:63833587:- chr17:63707418:- FRAMESHIFT NA TCGA-V5-A7RE-01A-11R-A354-31 SPAG9-TRIM37 17 21 chr17:50979746:- chr17:59091340:- FRAMESHIFT NA TCGA-V5-A7RE-01A-11R-A354-31 STRADA-GRB2 20 8 chr17:63713406:- chr17:75332797:- INFRAME NA TCGA-V5-A7RE-01A-11R-A354-31 USP32-FAM222B 11 34 chr17:60345481:- chr17:28790425:- . NA TCGA-V5-A7RE-01A-11R-A354-31 RAPGEFL1-NFE2L1 14 2 chr17:40177544:+ chr17:48056385:+ . NA TCGA-V5-A7RE-01A-11R-A354-31 CORO7-RMI2 10 14 chr16:4416459:- chr16:11316141:+ . NA TCGA-V5-A7RE-01A-11R-A354-31 DHX40-GH1 6 15 chr17:59588053:+ chr17:63918506:- INFRAME NA TCGA-V5-A7RE-01A-11R-A354-31 HEATR6-THRA1/BTR 6 9 chr17:60055515:- chr17:48294347:+ . NA TCGA-V5-AASV-01A-11R-A38D-31 USP36-DNAH17 31 12 chr17:78812860:- chr17:78437868:- INFRAME NA TCGA-V5-AASV-01A-11R-A38D-31 CTCF-HNRNPDL 19 7 chr16:67571264:+ chr4:82429412:- . Likely Oncogenic NA TCGA-V5-AASW-01A-11R-A406-31 CEP72-EXOC3 53 14 chr5:647916:+ chr5:453370:+ FRAMESHIFT NA TCGA-V5-AASW-01A-11R-A406-31 GNAQ-FBP1 15 2 chr9:78031100:- chr9:94620491:- FRAMESHIFT NA TCGA-V5-AASW-01A-11R-A406-31 ABL1-APBA1 13 2 chr9:130835525:+ chr9:69517279:- . Likely Oncogenic NA TCGA-V5-AASX-01A-11R-A38D-31 FAM35A-SEZ6L2 12 8 chr10:87096989:+ chr16:29885749:- . NA TCGA-VR-A8EO-01A-11R-A36D-31 ME1-UBE3D 27 15 chr6:83398367:- chr6:82957450:- INFRAME NA TCGA-VR-A8EQ-01A-11R-A36D-31 RALGAPB-KCNB1 82 21 chr20:38499633:+ chr20:49374992:- FRAMESHIFT NA TCGA-VR-A8EQ-01A-11R-A36D-31 TIMM22-SGSM2 15 13 chr17:997233:+ chr17:2376097:+ . NA TCGA-VR-A8ER-01A-11R-A36D-31 IFT80-TNIK 9 2 chr3:160399146:- chr3:171228221:- . NA TCGA-VR-A8ET-01A-11R-A406-31 YWHAB-STK4 40 5 chr20:44885886:+ chr20:45075018:+ . NA TCGA-VR-A8ET-01A-11R-A406-31 TBK1-RBM48 30 5 chr12:64495775:+ chr7:92532404:+ FRAMESHIFT NA TCGA-VR-A8EU-01A-11R-A36D-31 CTTN-TRGV5 26 17 chr11:70409960:+ chr7:38349665:- FRAMESHIFT NA TCGA-VR-A8EU-01A-11R-A36D-31 ABCA12-SGPP2 21 8 chr2:215025673:- chr2:222474568:+ INFRAME NA TCGA-VR-A8EU-01A-11R-A36D-31 KIAA1109-ADAD1 18 9 chr4:122197274:+ chr4:122380062:+ . NA TCGA-VR-A8EU-01A-11R-A36D-31 NLRP1-C1QBP 8 3 chr17:5581859:- chr17:5434966:- FRAMESHIFT NA TCGA-VR-A8EU-01A-11R-A36D-31 ZFHX3-PMFBP1 5 6 chr16:73058530:- chr16:72164916:- . NA TCGA-VR-A8EW-01A-11R-A36D-31 GTF3C3-COL5A2 23 6 chr2:196779035:- chr2:189052968:- FRAMESHIFT NA TCGA-VR-A8EW-01A-11R-A36D-31 UPF3A-CDC16 13 9 chr13:114286629:+ chr13:114261887:+ FRAMESHIFT NA TCGA-VR-A8EW-01A-11R-A36D-31 WDR44-DOCK11 13 3 chrX:118410959:+ chrX:118624539:+ INFRAME NA TCGA-VR-A8EX-01A-11R-A36D-31 TBC1D22A-TRMU 8 6 chr22:46997709:+ chr22:46356842:+ INFRAME NA TCGA-VR-A8EY-01A-11R-A36D-31 NPAS2-PACSIN2 56 28 chr2:100904786:+ chr22:42888798:- FRAMESHIFT NA TCGA-VR-A8EY-01A-11R-A36D-31 KIF18B-MEIOC 15 6 chr17:44932912:- chr17:44657127:+ INFRAME NA TCGA-VR-A8EY-01A-11R-A36D-31 CEBPZOS-FAF1 12 2 chr2:37196520:+ chr1:50491801:- . NA TCGA-VR-AA4D-01A-11R-A37I-31 ACLY-NEUROD2 66 105 chr17:41883122:- chr17:39606604:- . NA TCGA-VR-AA4D-01A-11R-A37I-31 ACAA2-MYO5B 12 2 chr18:49813469:- chr18:49853647:- FRAMESHIFT NA TCGA-VR-AA7B-01A-31R-A406-31 PASD1-ZFX 25 8 chrX:151648702:+ chrX:24207326:+ FRAMESHIFT NA TCGA-VR-AA7B-01A-31R-A406-31 ZC3H7B-USP49 13 8 chr22:41332227:+ chr6:41807011:- . NA TCGA-XP-A8T6-01A-11R-A36D-31 ZNF420-DPF1 38 31 chr19:37091121:+ chr19:38213756:- INFRAME NA TCGA-XP-A8T6-01A-11R-A36D-31 HNF4G-TERF2 16 11 chr8:75407964:+ chr16:69372355:- . NA TCGA-XP-A8T8-01A-11R-A36D-31 DACH1-KLF12 21 22 chr13:71865922:- chr13:73695671:- FRAMESHIFT NA TCGA-XP-A8T8-01A-11R-A36D-31 GATAD2A-CHST1 15 16 chr19:19465614:+ chr11:45652606:- . NA TCGA-XP-A8T8-01A-11R-A36D-31 BTG3-C21orf91-OT1 7 12 chr21:17604860:- chr21:17787210:- . NA TCGA-Z6-A8JE-01A-11R-A37I-31 CSNK1A1-FOXL2NB 14 3 chr5:149550075:- chr3:138949512:+ FRAMESHIFT NA TCGA-Z6-A9VB-01A-21R-A37I-31 NADSYN1-DHCR7 17 1 chr11:71491903:+ chr11:71444958:- . NA TCGA-Z6-AAPN-01A-11R-A406-31 EXT1-TSNARE1 24 6 chr8:118110085:- chr8:142212313:- . NA TCGA-02-0055-01A-01R-1849-01 RTF1-NRG4 1 2 chr15:41417313:+ chr15:75956011:- FRAMESHIFT NA TCGA-02-2485-01A-01R-1849-01 R3HDM2-MARS 67 5 chr12:57430720:- chr12:57504225:+ . NA TCGA-02-2485-01A-01R-1849-01 METTL21B-INHBE 8 8 chr12:57773128:+ chr12:57456094:+ INFRAME NA TCGA-02-2485-01A-01R-1849-01 R3HDM2-ATP23 7 6 chr12:57266731:- chr12:57945628:+ INFRAME NA TCGA-02-2485-01A-01R-1849-01 EGFR-SEPT14 2 0 chr7:55200413:+ chr7:55819223:- INFRAME Likely Oncogenic NA TCGA-02-2486-01A-01R-1849-01 PHF13-ESPN 4 2 chr1:6614105:+ chr1:6428226:+ INFRAME NA TCGA-02-2486-01A-01R-1849-01 TMEM234-CSMD2 4 1 chr1:32217259:- chr1:33792526:- FRAMESHIFT NA TCGA-02-2486-01A-01R-1849-01 CSMD2-IL2RA 2 0 chr1:33846884:- chr10:6018119:- INFRAME NA TCGA-02-2486-01A-01R-1849-01 SKIV2L2-IGF2R 2 0 chr5:55308147:+ chr6:159991184:+ INFRAME NA TCGA-06-0125-01A-01R-1849-01 ARID1A-RNF31 50 20 chr1:26767999:+ chr14:24155157:+ INFRAME Likely Oncogenic NA TCGA-06-0125-01A-01R-1849-01 SLC39A3-SGTA 30 14 chr19:2737048:- chr19:2765285:- FRAMESHIFT NA TCGA-06-0125-01A-01R-1849-01 FDX1-SLC35E2 12 2 chr11:110457047:+ chr1:1734835:- FRAMESHIFT NA TCGA-06-0125-01A-01R-1849-01 COX14-SPATS2 4 10 chr12:50112301:+ chr12:49460770:+ . NA TCGA-06-0130-01A-01R-1849-01 CDK12-CDC6 10 5 chr17:39463117:+ chr17:40289408:+ . Likely Oncogenic NA TCGA-06-0130-01A-01R-1849-01 TSFM-OS9 5 2 chr12:57796385:+ chr12:57715760:+ INFRAME NA TCGA-06-0130-01A-01R-1849-01 GSAP-STYXL1 4 4 chr7:77376848:- chr7:76005404:- INFRAME NA TCGA-06-0141-01A-01R-1849-01 GIGYF2-ECEL1 84 4 chr2:232697392:+ chr2:232481156:- . NA TCGA-06-0141-01A-01R-1849-01 GBAP1-CABIN1 45 24 chr1:155216384:- chr22:24178361:+ . NA TCGA-06-0141-01A-01R-1849-01 TAOK1-RARA 10 4 chr17:29391024:+ chr17:40348316:+ . NA TCGA-06-0141-01A-01R-1849-01 MTF1-SF3A3 8 4 chr1:37857251:- chr1:37987836:- INFRAME NA TCGA-06-0141-01A-01R-1849-01 SPECC1L-SNUPN 6 6 chr22:24270983:+ chr15:75626371:- . NA TCGA-06-0141-01A-01R-1849-01 HBA2-PCBP4 4 3 chr16:173632:+ chr3:51957688:- . NA TCGA-06-0141-01A-01R-1849-01 PTPN9-ASH1L 3 1 chr15:75578714:- chr1:155354630:- FRAMESHIFT NA TCGA-06-0190-01A-01R-1849-01 PGD-CAMTA1 12 5 chr1:10399704:+ chr1:7249491:+ INFRAME NA TCGA-06-0190-01A-01R-1849-01 PEX14-CLP1 5 0 chr1:10495321:+ chr11:57659455:+ FRAMESHIFT NA TCGA-06-0190-01A-01R-1849-01 PIAS4-GLYATL2 4 1 chr19:4029036:+ chr11:58844524:- . NA TCGA-06-0190-01A-01R-1849-01 DMXL2-CDKN2A 3 3 chr15:51448458:- chr9:21995161:- . Likely Oncogenic NA TCGA-06-0190-01A-01R-1849-01 MED13-EPHB2 3 1 chr17:61984584:- chr1:22710966:+ . NA TCGA-06-0190-01A-01R-1849-01 ZSWIM4-MRI1 2 1 chr19:13795801:+ chr19:13768561:+ FRAMESHIFT NA TCGA-06-0210-01A-01R-1849-01 NFASC-PRELP 94 62 chr1:204828782:+ chr1:203483169:+ . NA TCGA-06-0210-01A-01R-1849-01 ZC3H18-CHMP1A 39 22 chr16:88570566:+ chr16:89647331:- . NA TCGA-06-0210-01A-01R-1849-01 COA1-HECW1 22 9 chr7:43729429:- chr7:43541163:+ . NA TCGA-06-0210-01A-01R-1849-01 CHMP1A-SPIRE2 10 4 chr16:89649351:- chr16:89858338:+ FRAMESHIFT NA TCGA-06-0210-01A-01R-1849-01 HECW1-COA1 3 3 chr7:43479744:+ chr7:43609495:- . NA TCGA-06-0211-01A-01R-1849-01 LANCL2-SEPT14 615 344 chr7:55412089:+ chr7:55819223:- INFRAME NA TCGA-06-0211-01A-01R-1849-01 SEC61G-EGFR 25 20 chr7:54757495:- chr7:55156533:+ INFRAME Likely Oncogenic NA TCGA-06-0211-01A-01R-1849-01 SHB-LINGO2 4 1 chr9:38016011:- chr9:27950706:- . NA TCGA-06-0211-01A-01R-1849-01 EGFR-SEPT14 2 1 chr7:55019365:+ chr7:55819223:- FRAMESHIFT Likely Oncogenic NA TCGA-06-0878-01A-01R-1849-01 OPA3-EIF1 5 5 chr19:45584623:- chr17:41689778:+ INFRAME NA TCGA-06-0882-01A-01R-1849-01 FBRSL1-SFSWAP 15 4 chr12:132490861:+ chr12:131778065:+ INFRAME NA TCGA-06-0882-01A-01R-1849-01 ZNF689-ZNF48 12 4 chr16:30605081:- chr16:30397855:+ FRAMESHIFT NA TCGA-06-0882-01A-01R-1849-01 PXDN-TRIP12 10 0 chr2:1648172:- chr2:229774261:- FRAMESHIFT NA TCGA-06-0882-01A-01R-1849-01 TRIP12-CPS1 8 2 chr2:229785757:- chr2:210556719:+ INFRAME NA TCGA-06-0882-01A-01R-1849-01 SRGAP3-CEPT1 3 3 chr3:9248885:- chr1:111174879:+ FRAMESHIFT NA TCGA-06-0882-01A-01R-1849-01 SCARB1-SFSWAP 3 1 chr12:124863595:- chr12:131725405:+ INFRAME NA TCGA-06-0882-01A-01R-1849-01 MRPL27-EFCAB3 2 0 chr17:50370032:- chr17:62377968:+ FRAMESHIFT NA TCGA-06-1804-01A-01R-1849-01 MGAT1-FLT4 26 18 chr5:180808648:- chr5:180631778:- . NA TCGA-06-1804-01A-01R-1849-01 DIP2B-TMBIM6 24 12 chr12:50505240:+ chr12:49752464:+ FRAMESHIFT NA TCGA-06-1804-01A-01R-1849-01 TDRD3-ESD 12 8 chr13:60535233:+ chr13:46771496:- INFRAME NA TCGA-06-1804-01A-01R-1849-01 SLC39A9-BCL2L13 8 9 chr14:69442266:+ chr22:17655662:+ . NA TCGA-06-1804-01A-01R-1849-01 ATG5-PDSS2 5 7 chr6:106201972:- chr6:107154777:- FRAMESHIFT NA TCGA-06-1804-01A-01R-1849-01 RAVER1-DOCK6 4 6 chr19:10328642:- chr19:11245878:- FRAMESHIFT NA TCGA-06-2558-01A-01R-1849-01 AKAP11-MRPS31 32 23 chr13:42308609:+ chr13:40729601:- FRAMESHIFT NA TCGA-06-2558-01A-01R-1849-01 SLC26A10-METTL21B 12 3 chr12:57620452:+ chr12:57780255:+ INFRAME NA TCGA-06-2558-01A-01R-1849-01 POLR2A-ASAP2 7 1 chr17:7484857:+ chr2:9279317:+ INFRAME NA TCGA-06-2558-01A-01R-1849-01 ZBTB4-ACADVL 3 1 chr17:7479456:- chr17:7220604:+ . NA TCGA-06-2558-01A-01R-1849-01 TCEA1-ALKAL1 2 1 chr8:54010430:- chr8:52542445:- FRAMESHIFT NA TCGA-06-2558-01A-01R-1849-01 KIDINS220-MIR7515HG 1 3 chr2:8796771:- chr2:6626238:- . NA TCGA-06-2558-01A-01R-1849-01 ZNF678-SMIM22 1 3 chr1:227563724:+ chr16:4794952:+ . NA TCGA-06-2558-01A-01R-1849-01 PIP4K2C-DCTN2 1 2 chr12:57596031:+ chr12:57535845:- INFRAME NA TCGA-06-2558-01A-01R-1849-01 VWC2-RAB20 1 2 chr7:49776131:+ chr13:110524197:- FRAMESHIFT NA TCGA-06-2559-01A-01R-1849-01 HOPX-PDCL2P1 80 1 chr4:56681255:- chrX:23198345:+ . NA TCGA-06-2559-01A-01R-1849-01 KIAA1211-NMU 58 25 chr4:56179430:+ chr4:55630460:- . NA TCGA-06-2559-01A-01R-1849-01 CTDSP2-DCUN1D4 36 19 chr12:57846372:- chr4:51899270:+ FRAMESHIFT NA TCGA-06-2559-01A-01R-1849-01 AASDH-LRRC66 14 10 chr4:56351342:- chr4:52003392:- FRAMESHIFT NA TCGA-06-2559-01A-01R-1849-01 TSFM-METTL21B 4 1 chr12:57783283:+ chr12:57773017:+ INFRAME NA TCGA-06-2559-01A-01R-1849-01 TSPAN31-AVIL 2 0 chr12:57747131:+ chr12:57797995:- INFRAME NA TCGA-06-2559-01A-01R-1849-01 CD24-SCML4 1 2 chr6:106974578:- chr6:107745143:- FRAMESHIFT NA TCGA-06-2559-01A-01R-1849-01 HOPX-PDCL2 1000 1000 chr4:56681255:- chr4:55582237:- . NA TCGA-06-2561-01A-02R-1849-01 LRP5-ATG16L2 6 7 chr11:68439916:+ chr11:72828359:+ INFRAME NA TCGA-06-2561-01A-02R-1849-01 MFSD6-CALCRL 5 4 chr2:190437561:+ chr2:187363502:- INFRAME NA TCGA-06-2561-01A-02R-1849-01 CEP170-C1orf100 5 3 chr1:243186259:- chr1:244364688:+ . NA TCGA-06-2561-01A-02R-1849-01 AFF3-ITSN2 1 2 chr2:99672538:- chr2:24212748:- INFRAME NA TCGA-06-2562-01A-01R-1849-01 ICE2-ALDH1A2 21 19 chr15:60476063:- chr15:58107468:- . NA TCGA-06-2562-01A-01R-1849-01 GIGYF2-NGEF 6 7 chr2:232756334:+ chr2:232885369:- FRAMESHIFT NA TCGA-06-2562-01A-01R-1849-01 CDK5RAP2-AVEN 7 1 chr9:120437295:- chr15:33875995:- INFRAME NA TCGA-06-2562-01A-01R-1849-01 RAB27A-ASTN2 7 0 chr15:55223889:- chr9:116863733:- INFRAME NA TCGA-06-2562-01A-01R-1849-01 SV2B-AQP9 2 4 chr15:91128810:+ chr15:58166673:+ . NA TCGA-06-2562-01A-01R-1849-01 GAS7-CHMP4A 2 0 chr17:10019777:- chr14:24211829:- INFRAME NA TCGA-06-2563-01A-01R-1849-01 ENTPD7-IDE 7 11 chr10:99679875:+ chr10:92490595:- INFRAME NA TCGA-06-2564-01A-01R-1849-01 DSTN-CCDC127 9 6 chr20:17570211:+ chr5:205958:- FRAMESHIFT NA TCGA-06-2564-01A-01R-1849-01 CCDC127-TERT 3 3 chr5:216729:- chr5:1282624:- INFRAME NA TCGA-06-2565-01A-01R-1849-01 CSNK1E-DDX17 161 79 chr22:38294404:- chr22:38485118:- . NA TCGA-06-2565-01A-01R-1849-01 KIF1B-EPB41 22 18 chr1:10324062:+ chr1:28987431:+ . NA TCGA-06-2565-01A-01R-1849-01 SKI-SSU72 8 13 chr1:2229735:+ chr1:1564916:- FRAMESHIFT NA TCGA-06-2565-01A-01R-1849-01 AGRN-PLCH2 6 7 chr1:1022462:+ chr1:2430338:+ . NA TCGA-06-2565-01A-01R-1849-01 SEC61G-EGFR 1 1 chr7:54755779:- chr7:55142286:+ FRAMESHIFT Likely Oncogenic NA TCGA-06-2569-01A-01R-1849-01 SSR1-DMD 48 20 chr6:7309917:- chrX:32310276:- INFRAME NA TCGA-06-2569-01A-01R-1849-01 WDR59-ASB9 13 3 chr16:74908908:- chrX:15254844:- FRAMESHIFT NA TCGA-06-2569-01A-01R-1849-01 COX14-GPD1 9 0 chr12:50112301:+ chr12:50106805:+ . NA TCGA-06-2570-01A-01R-1849-01 R3HDM2-TSFM 51 18 chr12:57395749:- chr12:57783110:+ . NA TCGA-06-2570-01A-01R-1849-01 KDM4B-SNTG1 6 2 chr19:5047669:+ chr8:50172561:+ . NA TCGA-06-2570-01A-01R-1849-01 CEBPZOS-TAF7L 2 5 chr2:37201726:+ chrX:101275281:- . NA TCGA-06-2570-01A-01R-1849-01 PDLIM5-TIMM23 2 0 chr4:94455384:+ chr10:45982523:+ INFRAME NA TCGA-06-5408-01A-01R-1849-01 NSD1-PARK2 3 1 chr5:177248324:+ chr6:161569416:- FRAMESHIFT Likely Oncogenic NA TCGA-06-5412-01A-01R-1849-01 RREB1-EEF1E1 7 7 chr6:7108060:+ chr6:8097467:- . NA TCGA-06-5412-01A-01R-1849-01 CDC5L-PAQR8 6 10 chr6:44408632:+ chr6:52403162:+ . NA TCGA-06-5412-01A-01R-1849-01 GLIPR1L2-NDUFA12 3 2 chr12:75391350:+ chr12:94897310:- . NA TCGA-06-5413-01A-01R-1849-01 AKAP6-EGLN3 128 56 chr14:32433817:+ chr14:33931215:- INFRAME NA TCGA-06-5413-01A-01R-1849-01 MEX3C-ATP9B 4 1 chr18:51196567:- chr18:79277054:+ FRAMESHIFT NA TCGA-06-5413-01A-01R-1849-01 NR2F2-DCC 3 3 chr15:96334603:+ chr18:53066046:+ FRAMESHIFT NA TCGA-06-5413-01A-01R-1849-01 RTTN-MAPK4 2 7 chr18:70199414:- chr18:50663089:+ . NA TCGA-06-5413-01A-01R-1849-01 RGS6-AKAP6 1 2 chr14:72352194:+ chr14:32577120:+ FRAMESHIFT NA TCGA-06-5856-01A-01R-1849-01 SUDS3-CDK4 108 85 chr12:118391282:+ chr12:57751736:- . NA TCGA-06-5856-01A-01R-1849-01 SETD1B-KDM2B 115 44 chr12:121810835:+ chr12:121575859:- FRAMESHIFT NA TCGA-06-5856-01A-01R-1849-01 C12orf49-SRRM4 74 21 chr12:116737790:- chr12:119162671:+ . NA TCGA-06-5856-01A-01R-1849-01 TMEM120B-AVIL 67 29 chr12:121712964:+ chr12:57799920:- INFRAME NA TCGA-06-5856-01A-01R-1849-01 NAA60-IL32 52 72 chr16:3458181:+ chr16:3065784:+ . NA TCGA-06-5856-01A-01R-1849-01 KDM2B-KSR2 43 16 chr12:121548877:- chr12:117860431:- FRAMESHIFT NA TCGA-06-5856-01A-01R-1849-01 CTDSP2-MDM2 40 26 chr12:57846372:- chr12:68809208:+ FRAMESHIFT NA TCGA-06-5856-01A-01R-1849-01 VASN-RBFOX1 22 10 chr16:4371993:+ chr16:7709056:+ . NA TCGA-06-5856-01A-01R-1849-01 HLCS-MIR99AHG 15 8 chr21:36962036:- chr21:16487490:+ . NA TCGA-06-5856-01A-01R-1849-01 TOP3B-IGLVIV-66-1 12 6 chr22:21963923:- chr22:22058479:+ . NA TCGA-06-5856-01A-01R-1849-01 C12orf49-HSPB8 11 9 chr12:116737790:- chr12:119187025:+ INFRAME NA TCGA-06-5856-01A-01R-1849-01 RANBP3-PRM1 11 5 chr19:5927968:- chr16:11281230:- FRAMESHIFT NA TCGA-06-5856-01A-01R-1849-01 CRACR2A-C12orf4 9 11 chr12:3673446:- chr12:4491234:- INFRAME NA TCGA-06-5856-01A-01R-1849-01 NUDT16L1-FAHD1 8 4 chr16:4694238:+ chr16:1838016:+ INFRAME NA TCGA-06-5856-01A-01R-1849-01 CENPU-CFAP97 8 2 chr4:184710072:- chr4:185161962:- . NA TCGA-06-5856-01A-01R-1849-01 LRP1-IGLVIV-66-1 7 5 chr12:57185205:+ chr22:22058479:+ . NA TCGA-06-5856-01A-01R-1849-01 TAOK3-ATP23 7 0 chr12:118372648:- chr12:57945628:+ . NA TCGA-06-5856-01A-01R-1849-01 CNOT2-ERBB3 3 2 chr12:70278274:+ chr12:56100174:+ INFRAME NA TCGA-06-5856-01A-01R-1849-01 CRAMP1-TVP23A 3 2 chr16:1641187:+ chr16:10775096:- INFRAME NA TCGA-06-5856-01A-01R-1849-01 RPL41-NACA 1 7 chr12:56117211:+ chr12:56714687:- INFRAME NA TCGA-06-5856-01A-01R-1849-01 RAB3IP-ERBB3 2 2 chr12:69756663:+ chr12:56083751:+ FRAMESHIFT NA TCGA-06-5856-01A-01R-1849-01 KNTC1-METTL7A 2 1 chr12:122539754:+ chr12:50925037:+ . NA TCGA-06-5856-01A-01R-1849-01 ATR-PHF14 2 0 chr3:142566121:- chr7:11111350:+ FRAMESHIFT Likely Oncogenic NA TCGA-06-5856-01A-01R-1849-01 TSFM-IFNG 1000 1000 chr12:57786291:+ chr12:68155365:- FRAMESHIFT NA TCGA-06-5859-01A-01R-1849-01 MAP3K13-CD37 32 13 chr3:185285643:+ chr19:49336909:+ FRAMESHIFT NA TCGA-06-5859-01A-01R-1849-01 SMAD4-CPLX4 14 17 chr18:51059916:+ chr18:59276734:- FRAMESHIFT Likely Oncogenic NA TCGA-06-5859-01A-01R-1849-01 SMAD4-RAX 10 4 chr18:51059916:+ chr18:59269501:- INFRAME Likely Oncogenic NA TCGA-06-5859-01A-01R-1849-01 DDIT3-GLI1 4 9 chr12:57520418:- chr12:57463665:+ . NA TCGA-06-5859-01A-01R-1849-01 R3HDM2-TSFM 4 0 chr12:57430720:- chr12:57796177:+ . NA TCGA-06-5859-01A-01R-1849-01 GLI1-DCTN2 3 0 chr12:57460201:+ chr12:57535845:- . NA TCGA-12-3650-01A-01R-1849-01 DKC1-ELDR 53 41 chrX:154765998:+ chr7:55238666:- . NA TCGA-12-3650-01A-01R-1849-01 PLEKHM2-TMEM51 9 16 chr1:15719920:+ chr1:15210490:+ . NA TCGA-12-3652-01A-01R-1849-01 NFX1-C9orf24 14 10 chr9:33295427:+ chr9:34382869:- INFRAME NA TCGA-12-3652-01A-01R-1849-01 UBE4B-MED18 1 4 chr1:10130813:+ chr1:28330597:+ . NA TCGA-12-3653-01A-01R-1849-01 FRS2-DTX3 1 2 chr12:69470530:+ chr12:57609077:+ . NA TCGA-12-5295-01A-01R-1849-01 SDC4-SPCS1 183 103 chr20:45348325:- chr3:52706644:+ INFRAME NA TCGA-14-0787-01A-01R-1849-01 ASH1L-C1orf61 44 55 chr1:155415744:- chr1:156414753:- INFRAME NA TCGA-14-0787-01A-01R-1849-01 ATP6V0A1-MB 19 12 chr17:42470218:+ chr22:35637208:- . NA TCGA-14-0787-01A-01R-1849-01 NISCH-CYHR1 10 2 chr3:52470907:+ chr8:144465096:- . NA TCGA-14-0787-01A-01R-1849-01 RERE-SLC45A1 4 3 chr1:8541214:- chr1:8335437:+ FRAMESHIFT NA TCGA-14-0787-01A-01R-1849-01 CYTH3-RAB40B 3 0 chr7:6272474:- chr17:82661047:- FRAMESHIFT NA TCGA-14-0789-01A-01R-1849-01 HARBI1-PTPRS 6 0 chr11:46615568:- chr19:5246045:- INFRAME NA TCGA-14-0790-01B-01R-1849-01 TRIM65-GALK1 6 4 chr17:75891277:- chr17:75751737:- . NA TCGA-14-0790-01B-01R-1849-01 DYNC1LI1-GADL1 2 2 chr3:32570346:- chr3:30861765:- INFRAME NA TCGA-14-0790-01B-01R-1849-01 CUX1-DGKB 2 1 chr7:102028145:+ chr7:14841450:- . NA TCGA-14-0817-01A-01R-1849-01 ZC3H4-TTLL3 29 10 chr19:47086384:- chr3:9854559:+ INFRAME NA TCGA-14-0817-01A-01R-1849-01 JAGN1-ZC3H4 7 6 chr3:9893026:+ chr19:47086538:- FRAMESHIFT NA TCGA-14-0817-01A-01R-1849-01 FMNL3-TUBA1B 6 2 chr12:49707055:- chr12:49129722:- INFRAME NA TCGA-14-0871-01A-01R-1849-01 GDI1-TBC1D8 4 0 chrX:154438864:+ chr2:101028353:- FRAMESHIFT NA TCGA-14-0871-01A-01R-1849-01 NDST3-ZNF483 2 0 chr4:118143684:+ chr9:111576365:+ FRAMESHIFT NA TCGA-14-0871-01A-01R-1849-01 TXN-NDST3 1 2 chr9:110250820:- chr4:118138054:+ INFRAME NA TCGA-14-1034-01A-01R-1849-01 FKBP8-SLC1A6 95 78 chr19:18533270:- chr19:14950390:- FRAMESHIFT NA TCGA-14-1034-01A-01R-1849-01 EIF4A1-PHOSPHO1 32 45 chr17:7575258:+ chr17:49225004:- INFRAME NA TCGA-14-1034-01A-01R-1849-01 SPOCD1-C1orf234 1 1 chr1:31798207:- chr1:23011200:- INFRAME NA TCGA-14-1823-01A-01R-1849-01 MTERF1-VOPP1 22 15 chr7:91880657:- chr7:55473045:- . NA TCGA-14-1823-01A-01R-1849-01 CNOT2-YLPM1 2 0 chr12:70243480:+ chr14:74829213:+ . NA TCGA-14-1823-01A-01R-1849-01 AKAP9-SEC61G 1 1 chr7:91941147:+ chr7:54757594:- . NA TCGA-14-1825-01A-01R-1850-01 EGFR-SEPT14 1 1 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-16-0846-01A-01R-1850-01 CTDSP2-TSPAN31 17 11 chr12:57846372:- chr12:57746589:+ FRAMESHIFT NA TCGA-16-1045-01B-01R-1850-01 THRA-GSDMA 84 53 chr17:40077608:+ chr17:39965683:+ . NA TCGA-16-1045-01B-01R-1850-01 ADGRB2-HS3ST4 13 21 chr1:31755999:- chr16:26135612:+ FRAMESHIFT NA TCGA-16-1045-01B-01R-1850-01 EPS15-TRABD2B 9 2 chr1:51519199:- chr1:47801619:- INFRAME NA TCGA-19-2620-01A-01R-1850-01 TMEM192-TMEM184C 29 19 chr4:165100628:- chr4:147671867:+ FRAMESHIFT NA TCGA-19-2620-01A-01R-1850-01 SCAF1-TRAPPC6A 18 22 chr19:49646830:+ chr19:45164970:- FRAMESHIFT NA TCGA-19-2620-01A-01R-1850-01 GTF2IP4-ABCB1 4 3 chr7:73155343:+ chr7:87520876:- . NA TCGA-19-2625-01A-01R-1850-01 RBFOX2-LGALS2 28 28 chr22:36028240:- chr22:37571931:- INFRAME NA TCGA-19-2625-01A-01R-1850-01 UBAP2-NCF4 13 6 chr9:33986760:- chr22:36875653:+ FRAMESHIFT NA TCGA-19-2625-01A-01R-1850-01 MYH9-LARGE1 12 1 chr22:36322429:- chr22:33922827:- . NA TCGA-19-2625-01A-01R-1850-01 ZNRF3-CDC42EP1 9 1 chr22:28884066:+ chr22:37566072:+ . NA TCGA-19-2625-01A-01R-1850-01 PIGO-CA9 8 0 chr9:35096561:- chr9:35679854:+ . NA TCGA-19-2625-01A-01R-1850-01 CRB2-RECK 7 3 chr9:123378381:+ chr9:36102099:+ . NA TCGA-19-2625-01A-01R-1850-01 RECK-MYO18B 6 2 chr9:36052323:+ chr22:26003265:+ FRAMESHIFT NA TCGA-19-2625-01A-01R-1850-01 DRG1-MYH9 4 2 chr22:31427182:+ chr22:36327488:- FRAMESHIFT NA TCGA-19-2625-01A-01R-1850-01 TESK1-LARGE1 1 2 chr9:35606285:+ chr22:33432265:- FRAMESHIFT NA TCGA-19-5960-01A-11R-1850-01 NELL2-OS9 17 5 chr12:44875225:- chr12:57715760:+ FRAMESHIFT NA TCGA-19-5960-01A-11R-1850-01 SOBP-AIM1 7 10 chr6:107635469:+ chr6:106360851:+ . NA TCGA-19-5960-01A-11R-1850-01 TSFM-CCDC59 6 2 chr12:57787162:+ chr12:82223694:- FRAMESHIFT NA TCGA-19-5960-01A-11R-1850-01 METTL1-NELL2 1 2 chr12:57771974:- chr12:44610970:- FRAMESHIFT NA TCGA-26-5132-01A-01R-1850-01 PATL1-TECTA 128 46 chr11:59666853:- chr11:121187832:+ FRAMESHIFT NA TCGA-26-5132-01A-01R-1850-01 PDZRN4-CPM 4 6 chr12:41555760:+ chr12:68932840:- . NA TCGA-26-5133-01A-01R-1850-01 L2HGDH-MTX1P1 22 8 chr14:50294115:- chr1:155233011:+ . NA TCGA-26-5133-01A-01R-1850-01 DENND3-PTK2 4 2 chr8:141144259:+ chr8:140659678:- INFRAME NA TCGA-26-5133-01A-01R-1850-01 TAB1-PICK1 4 2 chr22:39421971:+ chr22:38071682:+ FRAMESHIFT NA TCGA-26-5133-01A-01R-1850-01 SNX29-FLRT1 4 1 chr16:12278036:+ chr11:64103194:+ . NA TCGA-26-5133-01A-01R-1850-01 PTK2-DENND3 3 1 chr8:141001125:- chr8:141136509:+ . NA TCGA-26-5134-01A-01R-1850-01 LNX1-USP46 20 17 chr4:53507317:- chr4:52628163:- INFRAME NA TCGA-26-5135-01A-01R-1850-01 RAP1B-CTDSP2 17 6 chr12:68611043:+ chr12:57829596:- . NA TCGA-26-5135-01A-01R-1850-01 EXOC1-NUP107 3 0 chr4:55860541:+ chr12:68741813:+ INFRAME NA TCGA-26-5135-01A-01R-1850-01 KATNBL1-TNPO3 2 1 chr15:34209951:- chr7:128984259:- . NA TCGA-26-5136-01B-01R-1850-01 CNN3-ALG14 61 51 chr1:94926838:- chr1:94983306:- INFRAME NA TCGA-26-5136-01B-01R-1850-01 FBXW9-PRDX2 9 13 chr19:12694594:- chr19:12801270:- . NA TCGA-26-5139-01A-01R-1850-01 ZSWIM4-UBQLN4 2 2 chr19:13809220:+ chr1:156042913:- INFRAME NA TCGA-27-1830-01A-01R-1850-01 PSMD1-DNER 14 9 chr2:231080314:+ chr2:229512936:- INFRAME NA TCGA-27-1830-01A-01R-1850-01 ANK2-ARHGAP10 5 13 chr4:113049812:+ chr4:148023263:+ INFRAME NA TCGA-27-1830-01A-01R-1850-01 PIGG-SPINK2 6 8 chr4:508970:+ chr4:56810184:- INFRAME NA TCGA-27-1830-01A-01R-1850-01 DANCR-TIMMDC1 2 0 chr4:52712959:+ chr3:119500695:+ . NA TCGA-27-1830-01A-01R-1850-01 SH3D19-ZNF721 1 2 chr4:151226047:- chr4:472701:- FRAMESHIFT NA TCGA-27-1831-01A-01R-1850-01 FREM2-MTRF1 10 4 chr13:38864606:+ chr13:41234007:- INFRAME NA TCGA-27-1831-01A-01R-1850-01 NR3C1-HMHB1 5 6 chr5:143314002:- chr5:143820480:+ INFRAME NA TCGA-27-1831-01A-01R-1850-01 SLC25A12-NFASC 2 1 chr2:171893205:- chr1:204944226:+ . NA TCGA-27-1831-01A-01R-1850-01 ABR-YWHAE 2 0 chr17:1179667:- chr17:1369741:- . NA TCGA-27-1832-01A-01R-1850-01 EPS15-C1orf185 6 3 chr1:51519199:- chr1:51112464:+ INFRAME NA TCGA-27-1832-01A-01R-1850-01 C1orf185-RNF11 3 1 chr1:51118801:+ chr1:51236734:+ . NA TCGA-27-1834-01A-01R-1850-01 MEGF8-CEACAMP3 51 23 chr19:42344833:+ chr19:41604164:+ . NA TCGA-27-1834-01A-01R-1850-01 NFASC-LRRN2 15 11 chr1:204828782:+ chr1:204620218:- . NA TCGA-27-1835-01A-01R-1850-01 SMIM13-TTLL5 21 11 chr6:11094389:+ chr14:75717861:+ FRAMESHIFT NA TCGA-27-1835-01A-01R-1850-01 NAA30-TERT 7 8 chr14:57399883:+ chr5:1282624:- FRAMESHIFT NA TCGA-27-1835-01A-01R-1850-01 RAI1-MXRA7 6 10 chr17:17798513:+ chr17:76688176:- INFRAME NA TCGA-27-1835-01A-01R-1850-01 RHOJ-C6orf52 2 24 chr14:63205047:+ chr6:10671598:- INFRAME NA TCGA-27-1835-01A-01R-1850-01 CLPTM1L-PPP2R5E 7 1 chr5:1344351:- chr14:63376108:- INFRAME NA TCGA-27-1835-01A-01R-1850-01 ATG14-FUT8 6 4 chr14:55411602:- chr14:65669243:+ FRAMESHIFT NA TCGA-27-1835-01A-01R-1850-01 YARS-RNF19B 6 4 chr1:32810591:- chr1:32949774:- INFRAME NA TCGA-27-1835-01A-01R-1850-01 MARCH9-OS9 4 9 chr12:57759020:+ chr12:57716412:+ . NA TCGA-27-1835-01A-01R-1850-01 MIIP-CMYA5 4 8 chr1:12030124:+ chr5:79788971:+ FRAMESHIFT NA TCGA-27-1835-01A-01R-1850-01 CMYA5-SRRM1 5 2 chr5:79789104:+ chr1:24672182:+ FRAMESHIFT NA TCGA-27-1835-01A-01R-1850-01 CLIC4-PLOD1 2 5 chr1:24814219:+ chr1:11947976:+ FRAMESHIFT NA TCGA-27-1835-01A-01R-1850-01 TTLL5-TTC6 1 2 chr14:75661637:+ chr14:37916498:+ . NA TCGA-27-1837-01A-01R-1850-01 EGFR-SEPT14 121 115 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-27-2519-01A-01R-1850-01 HDAC1-SERINC2 3 6 chr1:32302733:+ chr1:31410385:+ INFRAME NA TCGA-27-2519-01A-01R-1850-01 MARK4-DPF1 1 2 chr19:45251639:+ chr19:38222708:- FRAMESHIFT NA TCGA-27-2521-01A-01R-1850-01 C8orf33-RPL23AP87 24 4 chr8:145053443:+ chr17:83239924:+ . NA TCGA-27-2521-01A-01R-1850-01 CD83-FAM138E 8 3 chr6:14135974:+ chr15:101955907:+ . NA TCGA-27-2521-01A-01R-1850-01 ATP11B-SOX2OT_exon4 8 2 chr3:182793786:+ chr3:181715185:+ . NA TCGA-27-2521-01A-01R-1850-01 FOCAD-MOB3B 5 6 chr9:20867012:+ chr9:27359236:- FRAMESHIFT NA TCGA-27-2521-01A-01R-1850-01 SCD5-HNRNPDL 5 2 chr4:82798306:- chr4:82428446:- FRAMESHIFT NA TCGA-27-2523-01A-01R-1850-01 LONP1-ELOF1 42 28 chr19:5717531:- chr19:11552046:- . NA TCGA-27-2523-01A-01R-1850-01 NUDT2-GLIPR2 26 17 chr9:34339166:+ chr9:36162362:+ INFRAME NA TCGA-27-2523-01A-01R-1850-01 RPS6KC1-LYST 24 17 chr1:213129889:+ chr1:235677619:- FRAMESHIFT NA TCGA-27-2523-01A-01R-1850-01 DLG1-EHHADH 5 1 chr3:197136542:- chr3:185248517:- FRAMESHIFT NA TCGA-27-2523-01A-01R-1850-01 RPL36-RANBP3 1 3 chr19:5690327:+ chr19:5928087:- . NA TCGA-27-2524-01A-01R-1850-01 MRC2-RND2 71 10 chr17:62627920:+ chr17:43025960:+ FRAMESHIFT NA TCGA-27-2524-01A-01R-1850-01 MEF2D-ZDHHC5 7 4 chr1:156468780:- chr11:57682422:+ INFRAME NA TCGA-27-2524-01A-01R-1850-01 WSB1-MED1 4 8 chr17:27294435:+ chr17:39419918:- FRAMESHIFT NA TCGA-27-2524-01A-01R-1850-01 DBF4-GLUL 2 0 chr7:87878225:+ chr1:182385887:- FRAMESHIFT NA TCGA-27-2524-01A-01R-1850-01 NTPCR-LRRC28 2 0 chr1:232956443:+ chr15:99386030:+ INFRAME NA TCGA-27-2526-01A-01R-1850-01 OTUD7A-ASCC3 8 4 chr15:31570018:- chr6:100540387:- FRAMESHIFT NA TCGA-27-2526-01A-01R-1850-01 SMARCC1-ITGB4 2 0 chr3:47635190:- chr17:75748841:+ INFRAME NA TCGA-27-2528-01A-01R-1850-01 CHN2-TSPAN33 167 114 chr7:29146960:+ chr7:129161679:+ FRAMESHIFT NA TCGA-27-2528-01A-01R-1850-01 CREB5-KCNH2 40 42 chr7:28570537:+ chr7:150949049:- FRAMESHIFT NA TCGA-27-2528-01A-01R-1850-01 ERRFI1-VAMP3 11 6 chr1:8026158:- chr1:7777160:+ . Likely Oncogenic NA TCGA-27-2528-01A-01R-1850-01 AGAP3-CREB5 1 2 chr7:151087072:+ chr7:28488175:+ FRAMESHIFT NA TCGA-28-1747-01C-01R-1850-01 SP4-GPNMB 153 106 chr7:21429592:+ chr7:23273521:+ INFRAME NA TCGA-28-1747-01C-01R-1850-01 EGFR-SEPT14 79 37 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-28-1747-01C-01R-1850-01 OTUD7A-FMN1 41 15 chr15:31870507:- chr15:32798953:- . NA TCGA-28-1747-01C-01R-1850-01 SLCO1C1-ZPBP 9 1 chr12:20723254:+ chr7:49901215:- . NA TCGA-28-1747-01C-01R-1850-01 VOPP1-ELDR 6 0 chr7:55572271:- chr7:55238666:- . NA TCGA-28-1747-01C-01R-1850-01 VPS37B-SIRT4 2 1 chr12:122895952:- chr12:120303561:+ . NA TCGA-28-1753-01A-01R-1850-01 C11orf84-MACROD1 6 1 chr11:63819002:+ chr11:64015281:- INFRAME NA TCGA-28-1753-01A-01R-1850-01 MED27-FLRT1 4 3 chr9:132014337:- chr11:64103194:+ . NA TCGA-28-1753-01A-01R-1850-01 PPP6C-C11orf84 3 3 chr9:125171085:- chr11:63826928:+ FRAMESHIFT NA TCGA-28-2513-01A-01R-1850-01 SEC61G-CHCHD2 3378 294 chr7:54759158:- chr7:56106570:- . NA TCGA-28-2513-01A-01R-1850-01 EGFR-SEPT14 506 213 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-28-2513-01A-01R-1850-01 LANCL2-SEPT14 26 19 chr7:55366229:+ chr7:55846637:- INFRAME NA TCGA-28-2513-01A-01R-1850-01 SEC61G-PHKG1 23 0 chr7:54759158:- chr7:56088975:- . NA TCGA-28-2513-01A-01R-1850-01 NBPF3-EPHB2 14 6 chr1:21445219:+ chr1:22863037:+ INFRAME NA TCGA-28-5204-01A-01R-1850-01 TBC1D14-HTRA3 80 57 chr4:6994302:+ chr4:8286561:+ INFRAME NA TCGA-28-5204-01A-01R-1850-01 CLTA-UBE2R2 72 43 chr9:36204179:+ chr9:33911964:+ INFRAME NA TCGA-28-5204-01A-01R-1850-01 SPIN1-CNTNAP3P2 12 2 chr9:88388538:+ chr9:67082692:+ . NA TCGA-28-5204-01A-01R-1850-01 FAM102A-PTGES2 10 2 chr9:127979992:- chr9:128125441:- FRAMESHIFT NA TCGA-28-5204-01A-01R-1850-01 TRPM3-KHDRBS2 9 0 chr9:70681506:- chr6:61697253:- FRAMESHIFT NA TCGA-28-5204-01A-01R-1850-01 FAM13C-FAM149B1 7 4 chr10:59251575:- chr10:73174687:+ INFRAME NA TCGA-28-5204-01A-01R-1850-01 FAM149B1-ADK 2 4 chr10:73210438:+ chr10:74589282:+ FRAMESHIFT NA TCGA-28-5207-01A-01R-1850-01 TSFM-TJAP1 136 95 chr12:57797287:+ chr6:43505296:+ . NA TCGA-28-5207-01A-01R-1850-01 LHFPL4-SOX2-OT 7 7 chr3:9553685:- chr3:181563720:+ . NA TCGA-28-5207-01A-01R-1850-01 TXNRD2-HMOX1 7 0 chr22:19941701:- chr22:35386685:+ FRAMESHIFT NA TCGA-28-5207-01A-01R-1850-01 MTMR6-CDX2 4 2 chr13:25267779:- chr13:27963369:- FRAMESHIFT NA TCGA-28-5207-01A-01R-1850-01 SHMT2-SLC26A10 1 5 chr12:57234110:+ chr12:57624866:+ FRAMESHIFT NA TCGA-28-5208-01A-01R-1850-01 LANCL2-PSPHP1 76 20 chr7:55366229:+ chr7:55773181:+ . NA TCGA-28-5208-01A-01R-1850-01 COBL-SEPT14 28 13 chr7:51136158:- chr7:55819223:- INFRAME NA TCGA-28-5209-01A-01R-1850-01 CCNT1-OS9 20 9 chr12:48692239:- chr12:57715760:+ . NA TCGA-28-5216-01A-01R-1850-01 HOPX-IGFBP7 5 1 chr4:56681255:- chr4:57040933:- . NA TCGA-28-5216-01A-01R-1850-01 ITGA9-POPDC2 3 3 chr3:37519354:+ chr3:119642561:- FRAMESHIFT NA TCGA-28-5216-01A-01R-1850-01 CDK14-GATAD1 2 2 chr7:90917724:+ chr7:92448752:+ FRAMESHIFT NA TCGA-28-5216-01A-01R-1850-01 GNB1-OMA1 2 2 chr1:1793245:- chr1:58481174:- FRAMESHIFT NA TCGA-28-5216-01A-01R-1850-01 ZC3HAV1-SGCE 1 3 chr7:139073856:- chr7:94628359:- FRAMESHIFT NA TCGA-28-5220-01A-01R-1850-01 SMARCA4-CARM1 5 6 chr19:10961174:+ chr19:10904951:+ . Likely Oncogenic NA TCGA-28-5220-01A-01R-1850-01 NLGN1-NDUFB5 1 2 chr3:173605091:+ chr3:179623920:+ FRAMESHIFT NA TCGA-32-1970-01A-01R-1850-01 ZNF550-CXCL17 178 112 chr19:57552627:- chr19:42433856:- INFRAME NA TCGA-32-1970-01A-01R-1850-01 ZNF544-AP2A1 51 30 chr19:58246794:+ chr19:49781757:+ INFRAME NA TCGA-32-1970-01A-01R-1850-01 ZNF610-RALA 41 13 chr19:52336506:+ chr7:39706123:+ . NA TCGA-32-1970-01A-01R-1850-01 ZNF773-SNRPD2 26 9 chr19:57504786:+ chr19:45687727:- INFRAME NA TCGA-32-1970-01A-01R-1850-01 JAZF1-CPT1C 21 14 chr7:28180463:- chr19:49708723:+ FRAMESHIFT NA TCGA-32-1970-01A-01R-1850-01 NLGN1-CCDC155 7 4 chr3:173398063:+ chr19:49412968:+ . NA TCGA-32-1970-01A-01R-1850-01 EIF3K-CIC 6 7 chr19:38624192:+ chr19:42271775:+ . Likely Oncogenic NA TCGA-32-1970-01A-01R-1850-01 AVL9-ZNF544 5 3 chr7:32495802:+ chr19:58260851:+ FRAMESHIFT NA TCGA-32-1970-01A-01R-1850-01 MPLKIP-NLRP11 5 2 chr7:40134229:- chr19:55796250:- INFRAME NA TCGA-32-1970-01A-01R-1850-01 ZNF772-ERCC2 3 4 chr19:57466959:- chr19:45357699:- . NA TCGA-32-1970-01A-01R-1850-01 FUZ-ZNF528 3 1 chr19:49808414:- chr19:52401685:+ . NA TCGA-32-1970-01A-01R-1850-01 ZNF260-HECW1 2 4 chr19:36528219:- chr7:43396814:+ . NA TCGA-32-1970-01A-01R-1850-01 RHPN2-CHN2 2 3 chr19:32990514:- chr7:29354625:+ INFRAME NA TCGA-32-1970-01A-01R-1850-01 C7orf31-FKBP9 1 2 chr7:25151596:- chr7:33002676:+ FRAMESHIFT NA TCGA-32-1970-01A-01R-1850-01 FBXO27-RYR1 1 1 chr19:39026870:- chr19:38543347:+ FRAMESHIFT NA TCGA-32-1980-01A-01R-1850-01 DPH7-ZMYND19 3 2 chr9:137564434:- chr9:137588718:- FRAMESHIFT NA TCGA-32-1980-01A-01R-1850-01 LUC7L-CPM 3 2 chr16:220649:- chr12:68871956:- INFRAME NA TCGA-32-1980-01A-01R-1850-01 ZHX3-PDE4C 3 2 chr20:41267463:- chr19:18233400:- . NA TCGA-32-1982-01A-01R-1850-01 CDC42BPA-HYOU1 6 1 chr1:227213136:- chr11:119049837:- INFRAME NA TCGA-32-1982-01A-01R-1850-01 ZNF263-SUPT6H 1 2 chr16:3288570:+ chr17:28695352:+ FRAMESHIFT NA TCGA-32-5222-01A-01R-1850-01 EGFR-SEPT14P24 558 305 chr7:55200413:+ chr7:56360538:- . Likely Oncogenic NA TCGA-32-5222-01A-01R-1850-01 ZNF713-SEPT14 122 148 chr7:55906379:+ chr7:55846637:- . NA TCGA-32-5222-01A-01R-1850-01 MTOR-CAMTA1 70 58 chr1:11253839:- chr1:6820181:+ INFRAME NA TCGA-32-5222-01A-01R-1850-01 HP1BP3-EMC1 11 5 chr1:20787195:- chr1:19242473:- . NA TCGA-32-5222-01A-01R-1850-01 MLLT3-IZUMO3 10 6 chr9:20620654:- chr9:24545061:- INFRAME NA TCGA-32-5222-01A-01R-1850-01 PTPRU-UBIAD1 4 2 chr1:29236717:+ chr1:11285644:+ INFRAME NA TCGA-32-5222-01A-01R-1850-01 RPS11-TEAD2 2 0 chr19:49498046:+ chr19:49351365:- INFRAME NA TCGA-32-5222-01A-01R-1850-01 EGFR-SEPT14 1000 1000 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-41-2571-01A-01R-1850-01 FRS2-DTX3 593 1640 chr12:69470530:+ chr12:57609077:+ . NA TCGA-41-2571-01A-01R-1850-01 CTDSP2-C12orf10 179 140 chr12:57846372:- chr12:53305908:+ FRAMESHIFT NA TCGA-41-2571-01A-01R-1850-01 USP15-PCBP2 63 37 chr12:62260503:+ chr12:53454726:+ . NA TCGA-41-2571-01A-01R-1850-01 TMEM19-TSPAN8 7 7 chr12:71689704:+ chr12:71157787:- . NA TCGA-41-2571-01A-01R-1850-01 FAM19A2-PCBP2 7 4 chr12:62191912:- chr12:53454726:+ . NA TCGA-41-2572-01A-01R-1850-01 ZMAT5-ASCC2 110 32 chr22:29766872:- chr22:29790548:- . NA TCGA-41-2572-01A-01R-1850-01 SP3-PRCP 12 1 chr2:173954873:- chr11:82853278:- FRAMESHIFT NA TCGA-41-2572-01A-01R-1850-01 FBXL18-WDR83OS 6 3 chr7:5500488:- chr19:12669233:- INFRAME NA TCGA-41-2572-01A-01R-1850-01 UNC13D-FYN 4 0 chr17:75827957:- chr6:111661947:- . NA TCGA-41-3915-01A-01R-1850-01 STAU2-LRRC6 4 1 chr8:73746783:- chr8:132661627:- . NA TCGA-41-3915-01A-01R-1850-01 CACNA1A-VSTM2B 3 1 chr19:13623878:- chr19:29563846:+ . NA TCGA-41-3915-01A-01R-1850-01 PLEKHF2-TRIQK 2 1 chr8:95134030:+ chr8:92954564:- . NA TCGA-41-3915-01A-01R-1850-01 TRIQK-CXADR 1 2 chr8:92954406:- chr21:17547027:+ . NA TCGA-41-4097-01A-01R-1850-01 PPP2R2B-CCT3 35 20 chr5:146638251:- chr1:156325089:- INFRAME NA TCGA-41-4097-01A-01R-1850-01 SLC25A26-IMMT 26 12 chr3:66263379:+ chr2:86147833:- INFRAME NA TCGA-41-4097-01A-01R-1850-01 STIM1-MEF2D 5 1 chr11:3856409:+ chr1:156483430:- . NA TCGA-41-5651-01A-01R-1850-01 OS9-KIF5A 66 45 chr12:57696373:+ chr12:57567126:+ INFRAME NA TCGA-41-5651-01A-01R-1850-01 B4GALNT1-RPS6P22 20 6 chr12:57624081:- chr12:59020286:+ . NA TCGA-41-5651-01A-01R-1850-01 TSFM-INHBE 14 10 chr12:57793073:+ chr12:57456094:+ INFRAME NA TCGA-41-5651-01A-01R-1850-01 CLEC16A-TXNDC11 13 9 chr16:10982991:+ chr16:11684245:- FRAMESHIFT NA TCGA-41-5651-01A-01R-1850-01 B4GALNT1-TSFM 8 5 chr12:57626662:- chr12:57796177:+ . NA TCGA-41-5651-01A-01R-1850-01 TDRD3-GLI1 6 1 chr13:60397405:+ chr12:57470317:+ FRAMESHIFT NA TCGA-41-5651-01A-01R-1850-01 NEGR1-ZRANB2 3 6 chr1:72282319:- chr1:71078708:- INFRAME NA TCGA-41-5651-01A-01R-1850-01 TSFM-OS9 2 3 chr12:57787162:+ chr12:57716089:+ FRAMESHIFT NA TCGA-76-4926-01B-01R-1850-01 STAG2-PAK3 20 18 chrX:124057977:+ chrX:111013828:+ . Likely Oncogenic NA TCGA-76-4926-01B-01R-1850-01 CEMIP-ZYX 11 9 chr15:80932039:+ chr7:143388219:+ INFRAME NA TCGA-76-4926-01B-01R-1850-01 ACAP3-DVL1 6 0 chr1:1307769:- chr1:1342758:- INFRAME NA TCGA-76-4926-01B-01R-1850-01 RAB40C-PRR35 3 7 chr16:590433:+ chr16:563256:+ . NA TCGA-76-4926-01B-01R-1850-01 BMPR1A-LIPA 3 4 chr10:86756919:+ chr10:89247649:- . NA TCGA-76-4926-01B-01R-1850-01 SMARCA1-PGRMC1 3 1 chrX:129465520:- chrX:119240309:+ FRAMESHIFT NA TCGA-76-4929-01A-01R-1850-01 JMJD1C-NRBF2 15 5 chr10:63264651:- chr10:63146209:+ INFRAME NA TCGA-76-4929-01A-01R-1850-01 GPLD1-TDP2 7 5 chr6:24433187:- chr6:24651069:- INFRAME NA TCGA-76-4929-01A-01R-1850-01 CPNE2-HS1BP3 6 3 chr16:57092790:+ chr2:20560515:- . NA TCGA-76-4929-01A-01R-1850-01 ZNF532-GMPR 4 0 chr18:58953799:+ chr6:16246842:+ INFRAME NA TCGA-76-4931-01A-01R-1850-01 STARD7-HS1BP3 3 2 chr2:96187217:- chr2:20624892:- INFRAME NA TCGA-76-4931-01A-01R-1850-01 CHI3L1-PTPRZ1 2 0 chr1:203184576:- chr7:122028552:+ INFRAME NA TCGA-4P-AA8J-01A-11R-A39I-07 SUFU-ADK 19 38 chr10:102550106:+ chr10:74708321:+ INFRAME NA TCGA-4P-AA8J-01A-11R-A39I-07 SMPD4P1-MED15 9 54 chr22:20626096:- chr22:20582611:+ . NA TCGA-4P-AA8J-01A-11R-A39I-07 MMS19-MICU1 2 8 chr10:97498273:- chr10:72566794:- . NA TCGA-BA-4076-01A-01R-1436-07 PHACTR2-PLAGL1 3 30 chr6:143678209:+ chr6:143968978:- . NA TCGA-BA-4078-01A-01R-1436-07 SLC2A12-SGK1 20 61 chr6:134052378:- chr6:134262148:- FRAMESHIFT NA TCGA-BA-4078-01A-01R-1436-07 PTK7-ANKS1A 5 38 chr6:43076567:+ chr6:34967239:+ FRAMESHIFT NA TCGA-BA-4078-01A-01R-1436-07 ATF6B-CMAHP 3 33 chr6:32116480:- chr6:25115100:- . NA TCGA-BA-4078-01A-01R-1436-07 ANKS1A-DCDC2 5 2 chr6:34889599:+ chr6:24353623:- INFRAME NA TCGA-BA-4078-01A-01R-1436-07 POFUT1-FDFT1 1 1 chr20:32208065:+ chr8:11831518:+ FRAMESHIFT NA TCGA-BA-4078-01A-01R-1436-07 PRKDC-SPIDR 1 1 chr8:47927194:- chr8:47595811:+ FRAMESHIFT NA TCGA-BA-5151-01A-01R-1436-07 STIM2-TBC1D19 1 3 chr4:26861369:+ chr4:26720081:+ INFRAME NA TCGA-BA-5152-01A-02R-1873-07 RBMS2-NACA 2 1 chr12:56586926:+ chr12:56713190:- INFRAME NA TCGA-BA-5153-01A-01R-1436-07 TRIO-PPP2R5E 12 78 chr5:14280436:+ chr14:63382157:- INFRAME NA TCGA-BA-5153-01A-01R-1436-07 ARIH2-TRIO 1 9 chr3:48918998:+ chr5:14286871:+ . NA TCGA-BA-5557-01A-01R-1514-07 TFRC-JUP 1 1 chr3:196082043:- chr17:41771862:- . NA TCGA-BA-5558-01A-01R-1514-07 GRAMD2-PKM 10 29 chr15:72197731:- chr15:72202620:- FRAMESHIFT NA TCGA-BA-5559-01A-01R-1514-07 SAMD12-SAMHD1 21 76 chr8:118580715:- chr20:36916830:- INFRAME NA TCGA-BA-5559-01A-01R-1514-07 SAMHD1-YIF1B 12 57 chr20:36919364:- chr19:38305507:- INFRAME NA TCGA-BA-5559-01A-01R-1514-07 YIF1B-SAMD12 2 6 chr19:38309405:- chr8:118439961:- INFRAME NA TCGA-BA-6868-01B-12R-1915-07 LAMB1-PUS7 86 384 chr7:107986022:- chr7:105457926:- INFRAME NA TCGA-BA-6868-01B-12R-1915-07 MAMDC2-MRPS28 58 165 chr9:70131612:+ chr8:79919148:- FRAMESHIFT NA TCGA-BA-6868-01B-12R-1915-07 ELAVL1-LYPLA2P2 12 28 chr19:7991644:- chr19:7879940:- . NA TCGA-BA-6868-01B-12R-1915-07 SGMS1-GRID1 3 23 chr10:50466890:- chr10:85916239:- . NA TCGA-BA-6868-01B-12R-1915-07 MRPS28-MAMDC2 3 4 chr8:80002999:- chr9:70108211:+ INFRAME NA TCGA-BA-6868-01B-12R-1915-07 ELAVL1-PRR36 1000 1000 chr19:7973807:- chr19:7873617:- INFRAME NA TCGA-BA-6869-01A-11R-1873-07 PEMT-RAI1 4 31 chr17:17576920:- chr17:17724028:+ . NA TCGA-BA-6869-01A-11R-1873-07 RAI1-PEMT 5 26 chr17:17724159:+ chr17:17577027:- . NA TCGA-BA-6869-01A-11R-1873-07 PDLIM1-TNRC6A 1 7 chr10:95263864:- chr16:24789232:+ FRAMESHIFT NA TCGA-BA-6869-01A-11R-1873-07 PGD-CLSTN1 1 1 chr1:10399704:+ chr1:9730705:- INFRAME NA TCGA-BA-6871-01A-11R-1873-07 NUAK2-LEMD1 39 157 chr1:205311705:- chr1:205420574:- . NA TCGA-BA-6871-01A-11R-1873-07 BAIAP2-TBCD 38 148 chr17:81086580:+ chr17:82889668:+ INFRAME NA TCGA-BA-6871-01A-11R-1873-07 SCNN1A-DCP1B 8 78 chr12:6348727:- chr12:1946286:- INFRAME NA TCGA-BA-6871-01A-11R-1873-07 NR4A1-IL20RB 9 17 chr12:52041929:+ chr3:136980466:+ INFRAME NA TCGA-BA-6871-01A-11R-1873-07 ZNF76-ANKS1A 1 9 chr6:35259727:+ chr6:35017473:+ . NA TCGA-BA-6872-01A-11R-1873-07 SELENOW-EHD2 21 92 chr19:47778814:+ chr19:47740881:+ FRAMESHIFT NA TCGA-BA-6872-01A-11R-1873-07 LYPD1-NCKAP5 3 11 chr2:132668400:- chr2:132732051:- INFRAME NA TCGA-BA-6872-01A-11R-1873-07 EGFR-DYM 1 14 chr7:55019365:+ chr18:49391645:- FRAMESHIFT Likely Oncogenic NA TCGA-BA-6872-01A-11R-1873-07 HIPK3-WT1-AS 1 5 chr11:33257889:+ chr11:32452021:+ . NA TCGA-BA-6873-01A-11R-1873-07 ALDH1A3-IGF1R 1 3 chr15:100887712:+ chr15:98891325:+ FRAMESHIFT NA TCGA-BA-6873-01A-11R-1873-07 LTBP3-CERS3 1 3 chr11:65553701:- chr15:100402865:- INFRAME NA TCGA-BA-7269-01A-11R-2016-07 FOXN2-PLB1 30 79 chr2:48314814:+ chr2:28640927:+ . NA TCGA-BA-7269-01A-11R-2016-07 MARK2-BPIFA2 12 36 chr11:63839560:+ chr20:33178147:+ FRAMESHIFT NA TCGA-BA-7269-01A-11R-2016-07 TAOK1-PARD6G 6 12 chr17:29467216:+ chr18:80183150:- FRAMESHIFT NA TCGA-BA-A4IG-01A-11R-A266-07 MAP2K2-PSMD9 40 296 chr19:4110509:- chr12:121915856:+ INFRAME NA TCGA-BA-A4IG-01A-11R-A266-07 TNS4-CCR7 1 7 chr17:40487036:- chr17:40555818:- FRAMESHIFT NA TCGA-BA-A4IG-01A-11R-A266-07 CMTM4-SULT1E1 2 2 chr16:66696340:- chr4:69857653:- . NA TCGA-BA-A4II-01A-11R-A266-07 GSE1-EMC8 23 113 chr16:85613398:+ chr16:85789050:- FRAMESHIFT NA TCGA-BA-A4II-01A-11R-A266-07 MARK2-C11orf84 6 90 chr11:63900678:+ chr11:63826928:+ FRAMESHIFT NA TCGA-BA-A4II-01A-11R-A266-07 AKAP9-ANKIB1 3 10 chr7:91941147:+ chr7:92294889:+ . NA TCGA-BA-A4II-01A-11R-A266-07 WRAP53-MPDU1 3 6 chr17:7686078:+ chr17:7591851:+ . NA TCGA-BA-A4II-01A-11R-A266-07 KLHDC4-CA5A 2 9 chr16:87765792:- chr16:87902520:- INFRAME NA TCGA-BA-A4II-01A-11R-A266-07 TOP2A-TLK2 1 2 chr17:40416740:- chr17:62560016:+ INFRAME NA TCGA-BA-A6D8-01A-31R-A31N-07 DEDD-UFC1 13 39 chr1:161130815:- chr1:161153926:+ . NA TCGA-BA-A6D8-01A-31R-A31N-07 PCNX1-TTLL5 6 17 chr14:71103669:+ chr14:75954424:+ FRAMESHIFT NA TCGA-BA-A6DB-01A-11R-A30B-07 DLG1-TMEM44 1 3 chr3:197282679:- chr3:194623695:- INFRAME NA TCGA-BA-A6DE-01A-22R-A31N-07 C18orf8-PSPC1 16 121 chr18:23509279:+ chr13:19772543:- INFRAME NA TCGA-BA-A6DE-01A-22R-A31N-07 MAP2-ICA1L 9 45 chr2:209424276:+ chr2:202816009:- . NA TCGA-BA-A6DJ-01A-11R-A30B-07 UBE4B-PEX14 12 43 chr1:10033694:+ chr1:10536213:+ INFRAME NA TCGA-BA-A6DJ-01A-11R-A30B-07 VMP1-TUBD1 5 21 chr17:59817773:+ chr17:59878334:- FRAMESHIFT NA TCGA-BA-A6DL-01A-21R-A30B-07 PARL-ABCC5 6 13 chr3:183884722:- chr3:184014447:- . NA TCGA-BA-A6DL-01A-21R-A30B-07 CLTA-GNE 1 6 chr9:36204179:+ chr9:36249397:- FRAMESHIFT NA TCGA-BA-A8YP-01A-11R-A39I-07 PRPSAP2-PLLP 16 33 chr17:18867334:+ chr16:57258584:- FRAMESHIFT NA TCGA-BA-A8YP-01A-11R-A39I-07 NRIP1-GDPD1 11 29 chr21:15064745:- chr17:59245414:+ . NA TCGA-BA-A8YP-01A-11R-A39I-07 ZFR-PLEKHG4B 6 17 chr5:32379115:- chr5:181514:+ FRAMESHIFT NA TCGA-BA-A8YP-01A-11R-A39I-07 KBTBD2-PDE1C 5 8 chr7:32891536:- chr7:32169956:- . NA TCGA-BA-A8YP-01A-11R-A39I-07 KDM6A-DLL1 4 10 chrX:44974715:+ chr6:170286298:- FRAMESHIFT Likely Oncogenic NA TCGA-BA-A8YP-01A-11R-A39I-07 DANCR-GTF3C3 5 5 chr4:52712959:+ chr2:196770039:- . NA TCGA-BA-A8YP-01A-11R-A39I-07 RSF1-TENM4 3 5 chr11:77820528:- chr11:78738570:- FRAMESHIFT NA TCGA-BB-4217-01A-11R-2081-07 TUBD1-INPP5D 5 14 chr17:59886083:- chr2:233182410:+ FRAMESHIFT NA TCGA-BB-4223-01A-01R-1436-07 FAM69A-LRRC8D 4 11 chr1:92961376:- chr1:89843638:+ . NA TCGA-BB-4223-01A-01R-1436-07 OBSCN-CASZ1 3 15 chr1:228224734:+ chr1:10665571:- INFRAME NA TCGA-BB-4223-01A-01R-1436-07 ATP11B-NAALADL2 3 10 chr3:182869331:+ chr3:175655481:+ . NA TCGA-BB-4224-01A-01R-1436-07 PACS2-DIO3OS 16 59 chr14:105353733:+ chr14:101552757:- . NA TCGA-BB-4224-01A-01R-1436-07 ATF7-ATP5G2 9 33 chr12:53626280:- chr12:53676660:- . NA TCGA-BB-4225-01A-01R-1436-07 KCNQ1-METTL15 10 52 chr11:2445484:+ chr11:28526475:+ . NA TCGA-BB-4227-01A-01R-1873-07 MSI2-UTP18 11 65 chr17:57401471:+ chr17:51296965:+ INFRAME NA TCGA-BB-4227-01A-01R-1873-07 GLS-MYO1B 12 60 chr2:190924593:+ chr2:191276887:+ . NA TCGA-BB-4227-01A-01R-1873-07 RAP2B-ANAPC16 7 27 chr3:153163057:+ chr10:72230366:+ INFRAME NA TCGA-BB-4227-01A-01R-1873-07 RAP2B-ASCC1 6 16 chr3:153163577:+ chr10:72216072:- . NA TCGA-BB-4227-01A-01R-1873-07 TTLL11-NDUFA8 2 16 chr9:122039272:- chr9:122148277:- FRAMESHIFT NA TCGA-BB-8596-01A-11R-2403-07 SF1-HRASLS2 25 164 chr11:64766900:- chr11:63558660:- INFRAME NA TCGA-BB-A5HY-01A-11R-A28V-07 DTX2-ZP3 29 342 chr7:76463709:+ chr7:76425052:+ . NA TCGA-BB-A5HY-01A-11R-A28V-07 SIN3A-SNUPN 15 36 chr15:75451423:- chr15:75621056:- . NA TCGA-BB-A5HY-01A-11R-A28V-07 BDP1-PMCHL2 9 47 chr5:71483896:+ chr5:71377506:+ . NA TCGA-BB-A5HY-01A-11R-A28V-07 SLC25A17-DMC1 1 7 chr22:40799023:- chr22:38569390:- . NA TCGA-BB-A5HY-01A-11R-A28V-07 NIN-SAV1 1 3 chr14:50770388:- chr14:50665619:- INFRAME NA TCGA-C9-A47Z-01A-11R-A24H-07 AK3-IL33 8 197 chr9:4740937:- chr9:6241684:+ . NA TCGA-C9-A47Z-01A-11R-A24H-07 NDRG3-CPLX1 5 9 chr20:36746045:- chr4:792608:- . NA TCGA-CN-4723-01A-01R-1436-07 DNM1-LCN2 35 120 chr9:128203631:+ chr9:128151638:+ INFRAME NA TCGA-CN-4723-01A-01R-1436-07 KIAA0319L-DLGAP3 6 79 chr1:35554350:- chr1:34869089:- FRAMESHIFT NA TCGA-CN-4723-01A-01R-1436-07 CACNA2D1-NAALADL2 11 15 chr7:82335135:- chr3:175737306:+ INFRAME NA TCGA-CN-4725-01A-01R-1436-07 SLAIN2-CWH43 20 173 chr4:48383784:+ chr4:49003735:+ INFRAME NA TCGA-CN-4725-01A-01R-1436-07 ZNF236-ZNF627 2 4 chr18:76881512:+ chr19:11614527:+ FRAMESHIFT NA TCGA-CN-4726-01A-01R-1436-07 DSG1-DSP 1 7 chr18:31331867:+ chr6:7567781:+ INFRAME NA TCGA-CN-4726-01A-01R-1436-07 CHMP5-SPINK4 1 2 chr9:33276564:+ chr9:33245112:+ INFRAME NA TCGA-CN-4726-01A-01R-1436-07 PPP1R9B-COL1A1 1 2 chr17:50149143:- chr17:50192850:- INFRAME NA TCGA-CN-4728-01A-01R-1436-07 NLGN4Y-VAMP7 2 3 chrY:14622591:+ chrY:57126221:+ INFRAME NA TCGA-CN-4728-01A-01R-1436-07 TSC22D1-LETM1 1 5 chr13:44573163:- chr4:1825683:- FRAMESHIFT NA TCGA-CN-4730-01A-01R-1436-07 STARD3-OAZ1 1 2 chr17:39658522:+ chr19:2271782:+ INFRAME NA TCGA-CN-4731-01A-01R-1436-07 SCAF1-FLT3LG 14 56 chr19:49653705:+ chr19:49478909:+ FRAMESHIFT NA TCGA-CN-4731-01A-01R-1436-07 PPP3CC-PIWIL2 5 31 chr8:22475624:+ chr8:22281120:+ INFRAME NA TCGA-CN-4731-01A-01R-1436-07 WDR82-NT5DC2 5 29 chr3:52287833:- chr3:52529334:- . NA TCGA-CN-4731-01A-01R-1436-07 SLC3A2-GNG3 4 6 chr11:62856381:+ chr11:62707700:+ . NA TCGA-CN-4733-01A-02R-1873-07 RCL1-PLGRKT 11 18 chr9:4793227:+ chr9:5361888:- FRAMESHIFT NA TCGA-CN-4733-01A-02R-1873-07 EPB41L1-TGM3 7 20 chr20:36092813:+ chr20:2309657:+ . NA TCGA-CN-4735-01A-01R-1436-07 CDC42BPB-PPP4R3A 8 36 chr14:103003928:- chr14:91461607:- FRAMESHIFT NA TCGA-CN-4735-01A-01R-1436-07 TTC7B-PPP2R5C 1 17 chr14:90730075:- chr14:101856686:+ FRAMESHIFT NA TCGA-CN-4735-01A-01R-1436-07 PSD3-ANO1 2 6 chr8:18867674:- chr11:70087752:+ FRAMESHIFT NA TCGA-CN-4736-01A-01R-1436-07 MAP3K5-ARFIP1 3 17 chr6:136791710:- chr4:152872452:+ INFRAME NA TCGA-CN-4736-01A-01R-1436-07 PRRG4-QSER1 1 3 chr11:32830632:+ chr11:32953857:+ INFRAME NA TCGA-CN-4737-01A-01R-1436-07 TBC1D12-HELLS 4 15 chr10:94442019:+ chr10:94588229:+ INFRAME NA TCGA-CN-4738-01A-02R-1514-07 TLE3-THAP10 20 55 chr15:70094532:- chr15:70882908:- INFRAME NA TCGA-CN-4739-01A-02R-1514-07 TBC1D2-GABBR2 2 18 chr9:98228952:- chr9:98496514:- INFRAME NA TCGA-CN-4739-01A-02R-1514-07 USP25-PCNT 1 3 chr21:15811210:+ chr21:46421970:+ INFRAME NA TCGA-CN-4741-01A-01R-1436-07 PIP5K1C-MATK 7 27 chr19:3700297:- chr19:3781672:- INFRAME NA TCGA-CN-4742-01A-02R-1514-07 NCKAP1-PARD3 29 116 chr2:183023806:- chr10:34696419:- INFRAME NA TCGA-CN-4742-01A-02R-1514-07 ELMSAN1-ANO1 2 11 chr14:73727458:- chr11:70111707:+ FRAMESHIFT NA TCGA-CN-4742-01A-02R-1514-07 KLF7-ALS2 1 3 chr2:207165467:- chr2:201768945:- . NA TCGA-CN-5355-01A-01R-1436-07 HMGXB3-CAPN1 8 60 chr5:150001179:+ chr11:65204683:+ INFRAME NA TCGA-CN-5355-01A-01R-1436-07 SMG1P3-ME1 2 16 chr16:21519828:- chr6:83352139:- . NA TCGA-CN-5355-01A-01R-1436-07 BOP1-PLEC 1 2 chr8:144276224:- chr8:143938692:- FRAMESHIFT NA TCGA-CN-5359-01A-01R-1436-07 NEDD4L-CDH19 2 28 chr18:58165861:+ chr18:66572316:- . NA TCGA-CN-5359-01A-01R-1436-07 TSFM-OS9 5 4 chr12:57793073:+ chr12:57695962:+ INFRAME NA TCGA-CN-5359-01A-01R-1436-07 LAMB1-ATXN7L1 2 12 chr7:107986022:- chr7:105761463:- INFRAME NA TCGA-CN-5363-01A-01R-1436-07 NSF-STRADA 3 14 chr17:46704854:+ chr17:63690597:- . NA TCGA-CN-5363-01A-01R-1436-07 CD44-TRIM44 1 14 chr11:35139370:+ chr11:35725924:+ INFRAME NA TCGA-CN-5364-01A-01R-1436-07 PTPN1-P2RX4 11 49 chr20:50510590:+ chr12:121217134:+ FRAMESHIFT NA TCGA-CN-5364-01A-01R-1436-07 INTS12-CXXC4 1 13 chr4:105691976:- chr4:104472366:- INFRAME NA TCGA-CN-5366-01A-01R-1436-07 ESPN-FBLIM1 1 41 chr1:6460110:+ chr1:15784548:+ INFRAME NA TCGA-CN-5367-01A-01R-1436-07 CPT1A-KMT5B 31 88 chr11:68799218:- chr11:68167178:- FRAMESHIFT NA TCGA-CN-5367-01A-01R-1436-07 FCHSD2-GUCY1A2 11 85 chr11:73140031:- chr11:106986131:- FRAMESHIFT NA TCGA-CN-5367-01A-01R-1436-07 MAX-RUNX2 7 40 chr14:65093708:- chr6:45437947:+ FRAMESHIFT NA TCGA-CN-5367-01A-01R-1436-07 CEP126-YAP1 8 12 chr11:101922760:+ chr11:102162456:+ INFRAME Likely Oncogenic NA TCGA-CN-5367-01A-01R-1436-07 RUNX2-MAX 3 6 chr6:45432019:+ chr14:65078036:- FRAMESHIFT NA TCGA-CN-5367-01A-01R-1436-07 ARHGAP42-FAM168A 1 4 chr11:100795166:+ chr11:73468492:- . NA TCGA-CN-5369-01A-01R-1436-07 TNFSF14-GRAMD1A 1 7 chr19:6667113:- chr19:35019191:+ INFRAME NA TCGA-CN-5370-01A-01R-2016-07 THBS1-NRG1 20 71 chr15:39584422:+ chr8:32727949:+ FRAMESHIFT NA TCGA-CN-5370-01A-01R-2016-07 FOXP1-PXDNL 2 10 chr3:71493426:- chr8:51499770:- . Likely Oncogenic NA TCGA-CN-5370-01A-01R-2016-07 FOXN1-PRKDC 3 5 chr17:28506443:+ chr8:47785317:- . NA TCGA-CN-6010-01A-11R-1686-07 MAPK10-CCSER1 2 19 chr4:86453030:- chr4:90308244:+ . NA TCGA-CN-6012-01A-11R-1686-07 TIMELESS-GLS2 10 73 chr12:56437466:- chr12:56471895:- . NA TCGA-CN-6013-01A-11R-1686-07 POLR2B-REST 23 43 chr4:56990898:+ chr4:56966656:+ FRAMESHIFT NA TCGA-CN-6013-01A-11R-1686-07 NFYC-CTPS1 3 33 chr1:40691867:+ chr1:41001029:+ . NA TCGA-CN-6017-01A-11R-1686-07 TNNT3-COL1A1 1000 1000 chr11:1934885:+ chr17:50197994:- INFRAME NA TCGA-CN-6018-01A-11R-1686-07 SMURF1-AZGP1 6 31 chr7:99143726:- chr7:99972006:- INFRAME NA TCGA-CN-6018-01A-11R-1686-07 SMURF1-GJC3 1 13 chr7:99143726:- chr7:99923603:- INFRAME NA TCGA-CN-6020-01A-11R-1686-07 MIRLET7BHG-SCUBE1 7 39 chr22:46103249:+ chr22:43339235:- . NA TCGA-CN-6020-01A-11R-1686-07 NSD3-ASH2L 1 10 chr8:38304587:- chr8:38143739:+ . NA TCGA-CN-6022-01A-21R-1686-07 IQCH-MAP2K5 1 3 chr15:67261394:+ chr15:67693518:+ INFRAME NA TCGA-CN-6023-01A-11R-1686-07 NDUFAF6-DPY19L4 2 5 chr8:94975415:+ chr8:94726331:+ . NA TCGA-CN-6024-01A-11R-1686-07 SPEN-C1orf64 30 77 chr1:15848150:+ chr1:16005919:+ FRAMESHIFT Likely Oncogenic NA TCGA-CN-6024-01A-11R-1686-07 CBFA2T2-HM13 9 28 chr20:33490301:+ chr20:31544947:+ FRAMESHIFT NA TCGA-CN-6024-01A-11R-1686-07 GAPDH-TNC 1 9 chr12:6537010:+ chr9:115021267:- INFRAME NA TCGA-CN-6989-01A-11R-1915-07 TMSB10-COL6A2 1 3 chr2:84905718:+ chr21:46111450:+ . NA TCGA-CN-6992-01A-11R-1915-07 IVNS1ABP-BAHCC1 12 31 chr1:185299710:- chr17:81426800:+ INFRAME NA TCGA-CN-6992-01A-11R-1915-07 TPX2-UNC5D 3 7 chr20:31742647:+ chr8:35549292:+ . NA TCGA-CN-6992-01A-11R-1915-07 DESI2-C1orf101 1 12 chr1:244653355:+ chr1:244635489:+ INFRAME NA TCGA-CN-6992-01A-11R-1915-07 MED13-INTS2 1000 1000 chr17:61962752:- chr17:61912070:- FRAMESHIFT NA TCGA-CN-6994-01A-11R-1915-07 PHF21A-GLIS2 4 29 chr11:45945840:- chr16:4336725:+ FRAMESHIFT NA TCGA-CN-6994-01A-11R-1915-07 TYMP-ATP8B4 1 10 chr22:50529904:- chr15:49987549:- . NA TCGA-CN-6994-01A-11R-1915-07 FKBP3-FANCM 1 3 chr14:45129794:- chr14:45148837:+ INFRAME NA TCGA-CN-6995-01A-31R-2016-07 ANO1-FOLR3 2 25 chr11:70132079:+ chr11:72135947:+ . NA TCGA-CN-A499-01A-11R-A24H-07 VCL-SFXN2 2 7 chr10:74043153:+ chr10:102726612:+ INFRAME NA TCGA-CN-A49A-01A-11R-A24H-07 STK39-NCKAP5 8 35 chr2:168012634:- chr2:132732051:- INFRAME NA TCGA-CN-A49A-01A-11R-A24H-07 GPHN-ATP6V1D 1 7 chr14:67023675:+ chr14:67353040:- FRAMESHIFT NA TCGA-CN-A49C-01A-11R-A24H-07 MACROD1-TCN1 112 486 chr11:64151239:- chr11:59854835:- INFRAME NA TCGA-CN-A49C-01A-11R-A24H-07 CPT1A-P4HA3 3 8 chr11:68781771:- chr11:74289130:- FRAMESHIFT NA TCGA-CN-A49C-01A-11R-A24H-07 ERBB2-IKZF3 1 9 chr17:39717480:+ chr17:39792933:- FRAMESHIFT NA TCGA-CN-A63T-01A-11R-A28V-07 SIL1-DNAJC18 7 13 chr5:139121035:- chr5:139414272:- INFRAME NA TCGA-CN-A63T-01A-11R-A28V-07 CSTF3-CCDC73 2 2 chr11:33090532:- chr11:32760258:- . NA TCGA-CN-A63U-01A-11R-A30B-07 OCIAD1-GLIPR2 15 131 chr4:48831249:+ chr9:36162362:+ . NA TCGA-CN-A63U-01A-11R-A30B-07 SLC25A17-RBX1 12 60 chr22:40792525:- chr22:40967799:+ FRAMESHIFT NA TCGA-CN-A63W-01A-11R-A30B-07 COL17A1-CFAP43 1 9 chr10:104062258:- chr10:104167737:- FRAMESHIFT NA TCGA-CN-A63W-01A-11R-A30B-07 PEAK1-USP31 1 9 chr15:77420006:- chr16:23102463:- . NA TCGA-CN-A63W-01A-11R-A30B-07 OXR1-VPS13B 1 3 chr8:106359636:+ chr8:99699525:+ FRAMESHIFT NA TCGA-CN-A641-01A-11R-A30B-07 SPRR2G-SPRR1B 1000 1000 chr1:153149904:- chr1:153032460:+ INFRAME NA TCGA-CN-A642-01A-12R-A30B-07 MOB3A-STK11 13 71 chr19:2076811:- chr19:1216268:+ FRAMESHIFT Likely Oncogenic NA TCGA-CN-A6UY-01A-12R-A34R-07 CBFA2T2-REM1 1 6 chr20:33490301:+ chr20:31476227:+ . NA TCGA-CQ-5323-01A-01R-1686-07 CPT1A-SHANK2 6 55 chr11:68773265:- chr11:71174844:- . NA TCGA-CQ-5323-01A-01R-1686-07 CPT1A-FGF3 1 17 chr11:68839552:- chr11:69816423:- . NA TCGA-CQ-5323-01A-01R-1686-07 FCHSD2-NUMA1 2 9 chr11:72889829:- chr11:72006263:- INFRAME NA TCGA-CQ-5323-01A-01R-1686-07 RNF121-PPFIA1 1 10 chr11:71929124:+ chr11:70372212:+ . NA TCGA-CQ-5326-01A-01R-1873-07 MTERF1-PHTF2 2 3 chr7:91880055:- chr7:77893608:+ FRAMESHIFT NA TCGA-CQ-5326-01A-01R-1873-07 RWDD4-SORBS2 1 5 chr4:183650984:- chr4:185652728:- INFRAME NA TCGA-CQ-5332-01A-01R-1686-07 PANX1-HEPHL1 4 41 chr11:94129493:+ chr11:94111537:+ INFRAME NA TCGA-CQ-5332-01A-01R-1686-07 OSBPL1A-RIOK3 2 15 chr18:24225042:- chr18:23473429:+ INFRAME NA TCGA-CQ-5332-01A-01R-1686-07 PARP1-LIN9 4 6 chr1:226374226:- chr1:226250919:- INFRAME NA TCGA-CQ-5333-01A-01R-2403-07 EPS8L2-AGPAT2 95 542 chr11:709608:+ chr9:136674807:- FRAMESHIFT NA TCGA-CQ-5334-01A-01R-1686-07 PDE7A-NRG1 4 23 chr8:65779720:- chr8:32727949:+ INFRAME NA TCGA-CQ-6220-01A-11R-1915-07 CTSA-WFDC3 1 6 chr20:45895133:+ chr20:45789945:- FRAMESHIFT NA TCGA-CQ-6223-01A-11R-1915-07 SNAPC1-FLJ22447 4 46 chr14:61768740:+ chr14:61650962:+ . NA TCGA-CQ-6224-01A-11R-1915-07 PTPRD-CYGB 1 30 chr9:9938507:- chr17:76528611:- . Likely Oncogenic NA TCGA-CQ-6224-01A-11R-1915-07 ALG8-FGF19 2 7 chr11:78124021:- chr11:69699576:- FRAMESHIFT NA TCGA-CQ-6225-01A-11R-1915-07 EIF2AK4-EPB42 3 17 chr15:39939617:+ chr15:43203275:- FRAMESHIFT NA TCGA-CQ-6225-01A-11R-1915-07 DUS1L-CCDC57 1 6 chr17:82060701:- chr17:82101866:- INFRAME NA TCGA-CQ-6225-01A-11R-1915-07 MYO1B-ZNF536 1 3 chr2:191350225:+ chr19:30443561:+ . NA TCGA-CQ-6225-01A-11R-1915-07 AP2B1-RAB20 1 2 chr17:35594067:+ chr13:110524197:- INFRAME NA TCGA-CQ-6227-01A-11R-1915-07 FRMD6-BPIFB1 14 239 chr14:51570410:+ chr20:33286033:+ . NA TCGA-CQ-6228-01A-11R-1915-07 PANX1-CEP126 31 126 chr11:94153630:+ chr11:101944265:+ FRAMESHIFT NA TCGA-CQ-6228-01A-11R-1915-07 YIPF1-YTHDF2 31 80 chr1:53878315:- chr1:28768929:+ FRAMESHIFT NA TCGA-CQ-6228-01A-11R-1915-07 EGLN1-C1orf131 6 28 chr1:231420998:- chr1:231239188:- FRAMESHIFT NA TCGA-CQ-6228-01A-11R-1915-07 GALK2-TERB2 4 16 chr15:49292537:+ chr15:44978489:+ INFRAME NA TCGA-CQ-6228-01A-11R-1915-07 LYST-DISC1 3 7 chr1:235716712:- chr1:231795242:+ FRAMESHIFT NA TCGA-CQ-6228-01A-11R-1915-07 NCOA2-DCUN1D5 2 5 chr8:70403700:- chr11:103083326:- . NA TCGA-CQ-6229-01A-11R-1915-07 SYNE2-ITPK1 3 39 chr14:64020093:+ chr14:92993997:- INFRAME NA TCGA-CQ-7063-01A-11R-2403-07 CDKN2A-MTAP 18 48 chr9:21974678:- chr9:21815433:+ INFRAME Likely Oncogenic NA TCGA-CQ-7065-01A-11R-2081-07 NXN-WRAP53 23 173 chr17:979319:- chr17:7700741:+ INFRAME NA TCGA-CQ-7065-01A-11R-2081-07 NOTCH2-SPAG17 6 47 chr1:120069334:- chr1:117981401:- INFRAME NA TCGA-CQ-7065-01A-11R-2081-07 BACH1-DSCR3 5 25 chr21:29329693:+ chr21:37240639:- INFRAME NA TCGA-CQ-7068-01A-11R-2081-07 ZNF57-MRE11 1 1 chr19:2901048:+ chr11:94461036:- FRAMESHIFT NA TCGA-CQ-7069-01A-11R-2403-07 SERTAD2-TGFA 8 99 chr2:64750281:- chr2:70465733:- . NA TCGA-CQ-7071-01A-12R-A30B-07 ACTG1-SPRR1B 1 9 chr17:81512232:- chr1:153032327:+ . NA TCGA-CQ-7072-01A-21R-A30B-07 TMEM117-KIF16B 4 24 chr12:43944342:+ chr20:16312418:- FRAMESHIFT NA TCGA-CQ-7072-01A-21R-A30B-07 TBL1X-WWC3 1 6 chrX:9501849:+ chrX:10090771:+ . NA TCGA-CQ-A4C6-01A-11R-A24Z-07 CHSY1-PPP1CA 4 49 chr15:101235255:- chr11:67401199:- INFRAME NA TCGA-CQ-A4C9-01A-11R-A24Z-07 PAIP1-TMEM267 2 22 chr5:43555830:- chr5:43446557:- INFRAME NA TCGA-CQ-A4C9-01A-11R-A24Z-07 ELP4-EIF3M 1 12 chr11:31650221:+ chr11:32594914:+ FRAMESHIFT NA TCGA-CQ-A4C9-01A-11R-A24Z-07 UXS1-TMEM241 1 5 chr2:106158058:- chr18:23399647:- INFRAME NA TCGA-CQ-A4C9-01A-11R-A24Z-07 CIR1-NFE2L2 1000 1000 chr2:174395601:- chr2:177283805:- . NA TCGA-CQ-A4CB-01A-11R-A24Z-07 PPP1R2-GMNC 1 4 chr3:195542904:- chr3:190860858:- FRAMESHIFT NA TCGA-CQ-A4CG-01A-11R-A266-07 MICU1-DNAJB12 1 12 chr10:72475100:- chr10:72336696:- FRAMESHIFT NA TCGA-CQ-A4CH-01A-11R-A266-07 EHBP1-MDH1 28 137 chr2:62874532:+ chr2:63594488:+ INFRAME NA TCGA-CQ-A4CH-01A-11R-A266-07 CHST10-MAP4K4 19 81 chr2:100402564:- chr2:101823928:+ INFRAME NA TCGA-CQ-A4CH-01A-11R-A266-07 ITSN1-CHODL 1 28 chr21:33642713:+ chr21:17917220:+ . NA TCGA-CQ-A4CH-01A-11R-A266-07 PAPLN-MYL4 4 13 chr14:73274459:+ chr17:47209389:+ . NA TCGA-CQ-A4CH-01A-11R-A266-07 TRAPPC10-MDS2 2 6 chr21:44012560:+ chr1:23639680:+ FRAMESHIFT NA TCGA-CQ-A4CI-01A-11R-A266-07 SH2D3A-GPM6A 7 38 chr19:6767387:- chr4:175651987:- . NA TCGA-CR-5243-01A-01R-1514-07 COPS7A-RPLP0 1 1 chr12:6724818:+ chr12:120197462:- INFRAME NA TCGA-CR-5247-01A-01R-2016-07 CLN3-C15orf32 5 18 chr16:28484006:- chr15:92500358:+ . NA TCGA-CR-5247-01A-01R-2016-07 TFDP2-COG5 2 29 chr3:142093061:- chr7:107324521:- FRAMESHIFT NA TCGA-CR-5247-01A-01R-2016-07 NADSYN1-GSTP1 1 3 chr11:71458544:+ chr11:67584685:+ FRAMESHIFT NA TCGA-CR-5248-01A-01R-2016-07 MAGI1-DPH3 2 3 chr3:65621972:- chr3:16260829:- FRAMESHIFT NA TCGA-CR-5250-01A-01R-1514-07 SESN1-CENPW 1 3 chr6:109093795:- chr6:126346205:+ INFRAME NA TCGA-CR-5250-01A-01R-1514-07 ZFP36-OAZ1 1 1 chr19:39406928:+ chr19:2271385:+ FRAMESHIFT NA TCGA-CR-6467-01A-11R-1873-07 TRIP12-PID1 12 57 chr2:229879982:- chr2:229155964:- FRAMESHIFT NA TCGA-CR-6467-01A-11R-1873-07 ABCC4-ABCB4 4 73 chr13:95177707:- chr7:87409392:- INFRAME NA TCGA-CR-6467-01A-11R-1873-07 TTC12-LUC7L2 3 16 chr11:113344440:+ chr7:139412551:+ INFRAME NA TCGA-CR-6467-01A-11R-1873-07 MTDH-MATN2 4 5 chr8:97644887:+ chr8:97961408:+ INFRAME NA TCGA-CR-6467-01A-11R-1873-07 CLDN10-TTC12 2 3 chr13:95577338:+ chr11:113350073:+ INFRAME NA TCGA-CR-6470-01A-11R-1873-07 PLEKHA5-DCTN2 1 4 chr12:19132450:+ chr12:57535845:- FRAMESHIFT NA TCGA-CR-6474-01A-11R-1873-07 TFB2M-SMYD3 21 96 chr1:246564346:- chr1:246335474:- INFRAME NA TCGA-CR-6474-01A-11R-1873-07 MVP-ZNF267 15 54 chr16:29831073:+ chr16:31914476:+ FRAMESHIFT NA TCGA-CR-6478-01A-11R-1873-07 TMBIM4-TMEM131 10 96 chr12:66169855:- chr2:97814388:- FRAMESHIFT NA TCGA-CR-6478-01A-11R-1873-07 ANKRD23-FAM178B 16 44 chr2:96857888:- chr2:96902707:- . NA TCGA-CR-6478-01A-11R-1873-07 KIF21A-TSPAN8 16 42 chr12:39442927:- chr12:71157787:- . NA TCGA-CR-6478-01A-11R-1873-07 GPI-EYS 9 56 chr19:34396430:+ chr6:65057727:- INFRAME NA TCGA-CR-6478-01A-11R-1873-07 HSD17B12-TP53I11 4 12 chr11:43816391:+ chr11:44939190:- . NA TCGA-CR-6478-01A-11R-1873-07 CAV2-TES 2 5 chr7:116500447:+ chr7:116249020:+ INFRAME NA TCGA-CR-6480-01A-11R-1873-07 C1orf174-RAD18 30 106 chr1:3892883:- chr3:8881459:- FRAMESHIFT NA TCGA-CR-6480-01A-11R-1873-07 PPARA-SLC16A7 4 44 chr22:46151970:+ chr12:59655152:+ . NA TCGA-CR-6481-01A-11R-1873-07 KIF21A-IGKJ3 59 0 chr12:39331730:- chr2:88861257:- FRAMESHIFT NA TCGA-CR-6481-01A-11R-1873-07 CMC1-ZCWPW2 2 12 chr3:28241812:+ chr3:28435110:+ FRAMESHIFT NA TCGA-CR-6482-01A-11R-1873-07 ABCB9-MPHOSPH9 1 7 chr12:122966287:- chr12:123166789:- . NA TCGA-CR-6484-01A-11R-1873-07 CDKL3-IGKJ2 28 0 chr5:134319471:- chr2:88861559:- INFRAME NA TCGA-CR-6484-01A-11R-1873-07 AGAP1-UBE2F 7 49 chr2:235494849:+ chr2:237973092:+ . NA TCGA-CR-6487-01A-11R-1873-07 SNHG19-CSF1R 33 262 chr16:2154860:- chr5:150086607:- . NA TCGA-CR-6488-01A-12R-2081-07 IP6K1-TRAIP 1 26 chr3:49786354:- chr3:49840373:- . NA TCGA-CR-6488-01A-12R-2081-07 AATF-PCDH11X 2 12 chr17:37031685:+ chrX:92618264:+ FRAMESHIFT NA TCGA-CR-7364-01A-11R-2016-07 ASH2L-C8orf86 6 10 chr8:38110833:+ chr8:38516512:- INFRAME NA TCGA-CR-7364-01A-11R-2016-07 EIF4EBP1-TACC1 4 4 chr8:38030718:+ chr8:38846699:+ FRAMESHIFT NA TCGA-CR-7367-01A-11R-2016-07 TFB2M-SMYD3 28 39 chr1:246548545:- chr1:245929937:- INFRAME NA TCGA-CR-7367-01A-11R-2016-07 TIAM1-PCBP3 7 19 chr21:31339243:- chr21:45896208:+ . NA TCGA-CR-7367-01A-11R-2016-07 XXYLT1-OPA1 2 2 chr3:195156449:- chr3:193614723:+ INFRAME NA TCGA-CR-7368-01A-11R-2132-07 EGFR-SEPT14 1 7 chr7:55019365:+ chr7:55807258:- INFRAME Likely Oncogenic NA TCGA-CR-7370-01A-11R-2132-07 SLBP-LETM1 16 112 chr4:1694774:- chr4:1825683:- INFRAME NA TCGA-CR-7370-01A-11R-2132-07 PSMD14-CCDC148 1 4 chr2:161385571:+ chr2:158220713:- INFRAME NA TCGA-CR-7371-01A-11R-2016-07 ROCK1-RPL29 12 15 chr18:21110818:- chr3:51995880:- . NA TCGA-CR-7371-01A-11R-2016-07 SH3GL1-STAP2 1000 1000 chr19:4400324:- chr19:4334044:- INFRAME NA TCGA-CR-7374-01A-11R-2016-07 CREBBP-ATG10 6 30 chr16:3850297:- chr5:82058495:+ INFRAME Likely Oncogenic NA TCGA-CR-7374-01A-11R-2016-07 IGKC-SPSB1 6 1 chr2:88857255:- chr1:9356106:+ . NA TCGA-CR-7374-01A-11R-2016-07 CSDE1-CYB5B 4 5 chr1:114737999:- chr16:69430154:+ . NA TCGA-CR-7374-01A-11R-2016-07 TYW1-SIRPB2 2 5 chr7:67195337:+ chr20:1480065:- FRAMESHIFT NA TCGA-CR-7374-01A-11R-2016-07 RALY-RPN2 1 8 chr20:34031604:+ chr20:37223878:+ . NA TCGA-CR-7374-01A-11R-2016-07 HSD11B1L-SAFB 1 5 chr19:5687668:+ chr19:5664022:+ INFRAME NA TCGA-CR-7376-01A-11R-2132-07 APTX-NOL6 6 9 chr9:33001567:- chr9:33472412:- INFRAME NA TCGA-CR-7376-01A-11R-2132-07 CNTFR-KIF24 1 19 chr9:34581095:- chr9:34297114:- . NA TCGA-CR-7376-01A-11R-2132-07 CHMP5-GALT 2 4 chr9:33276564:+ chr9:34646677:+ . NA TCGA-CR-7376-01A-11R-2132-07 NFX1-ARHGEF39 1 3 chr9:33319127:+ chr9:35664126:- FRAMESHIFT NA TCGA-CR-7376-01A-11R-2132-07 UNC13B-DNAJB5 1 1 chr9:35162305:+ chr9:34993200:+ FRAMESHIFT NA TCGA-CR-7377-01A-11R-2016-07 PARD3-ARMC4 4 25 chr10:34814876:- chr10:27907777:- FRAMESHIFT NA TCGA-CR-7377-01A-11R-2016-07 ERC1-ANKRD26 1 3 chr12:1116033:+ chr10:27005723:- FRAMESHIFT NA TCGA-CR-7379-01A-11R-2016-07 DSG1-DSCAS 6 12 chr18:31340025:+ chr18:31150799:+ . NA TCGA-CR-7379-01A-11R-2016-07 GAS6-ATP4B 4 10 chr13:113846527:- chr13:113654942:- INFRAME NA TCGA-CR-7379-01A-11R-2016-07 NUDT3-CDH12 1 9 chr6:34392264:- chr5:21817132:- FRAMESHIFT NA TCGA-CR-7379-01A-11R-2016-07 ZC3H4-SAE1 1 4 chr19:47081513:- chr19:47203671:+ FRAMESHIFT NA TCGA-CR-7380-01A-11R-2016-07 IDH3A-SH2D7 4 2 chr15:78149430:+ chr15:78094116:+ INFRAME NA TCGA-CR-7382-01A-11R-2132-07 RNH1-HRAS 51 314 chr11:507113:- chr11:533944:- . NA TCGA-CR-7382-01A-11R-2132-07 NFRKB-FEN1 1 10 chr11:129892715:- chr11:61796922:+ INFRAME NA TCGA-CR-7383-01A-11R-2132-07 DCUN1D4-GPM6B 9 49 chr4:51863709:+ chrX:13785808:- INFRAME NA TCGA-CR-7383-01A-11R-2132-07 PCMTD1-ARHGAP26 2 1 chr8:51898930:- chr5:143207198:+ INFRAME NA TCGA-CR-7385-01A-11R-2016-07 TRIM25-TRIM37 14 43 chr17:56892018:- chr17:58982921:- FRAMESHIFT NA TCGA-CR-7386-01A-11R-2016-07 MAP2K5-RAB27A 1 6 chr15:67543470:+ chr15:55234956:- . NA TCGA-CR-7388-01A-11R-2016-07 RAP1GDS1-GSTCD 4 9 chr4:98352601:+ chr4:105845441:+ INFRAME NA TCGA-CR-7388-01A-11R-2016-07 CBFB-ATP13A3 1 9 chr16:67029813:+ chr3:194462236:- . NA TCGA-CR-7389-01A-11R-2016-07 ADAM17-ITGB1BP1 1 12 chr2:9555509:- chr2:9418732:- . NA TCGA-CR-7390-01A-11R-2016-07 SHC1-EFNA3 7 51 chr1:154965543:- chr1:155085091:+ FRAMESHIFT NA TCGA-CR-7390-01A-11R-2016-07 SPIDR-SNX7 7 20 chr8:47713641:+ chr1:98760054:+ FRAMESHIFT NA TCGA-CR-7392-01A-11R-2016-07 LRRC1-MLIP 3 24 chr6:53795415:+ chr6:54124473:+ INFRAME NA TCGA-CR-7392-01A-11R-2016-07 CUX1-CAV2 2 11 chr7:102115273:+ chr7:116316432:+ . NA TCGA-CR-7392-01A-11R-2016-07 ROCK2-LPIN1 1 3 chr2:11192148:- chr2:11765533:+ FRAMESHIFT NA TCGA-CR-7395-01A-11R-2016-07 GNB1-NADK 11 15 chr1:1890820:- chr1:1757310:- . NA TCGA-CR-7397-01A-11R-2016-07 SCMH1-SHISA5 2 34 chr1:41186121:- chr3:48501293:- INFRAME NA TCGA-CR-7397-01A-11R-2016-07 ITCH-CASS4 2 15 chr20:34424525:+ chr20:56445900:+ FRAMESHIFT NA TCGA-CR-7399-01A-11R-2016-07 AK3-RCL1 44 168 chr9:4722506:- chr9:4823548:+ INFRAME NA TCGA-CR-7399-01A-11R-2016-07 DGCR2-ANO1 28 123 chr22:19122128:- chr11:70103066:+ FRAMESHIFT NA TCGA-CR-7399-01A-11R-2016-07 VTI1B-PLEKHH1 7 47 chr14:67656416:- chr14:67585568:+ INFRAME NA TCGA-CR-7401-01A-11R-2016-07 APP-FRG2LP 12 80 chr21:26021840:- chr18:14138856:+ . NA TCGA-CR-7402-01A-11R-2016-07 DSG2-DSG4 62 275 chr18:31541314:+ chr18:31399272:+ INFRAME NA TCGA-CR-7402-01A-11R-2016-07 VCL-SEC24C 30 103 chr10:74043153:+ chr10:73766760:+ INFRAME NA TCGA-CR-7404-01A-11R-2132-07 EFNA1-FLAD1 1 4 chr1:155128069:+ chr1:154989560:+ FRAMESHIFT NA TCGA-CV-5430-01A-02R-1686-07 OSGIN2-RIPK2 27 61 chr8:89914746:+ chr8:89786593:+ INFRAME NA TCGA-CV-5430-01A-02R-1686-07 PHF8-SLCO1C1 1 7 chrX:54022259:- chr12:20717132:+ FRAMESHIFT NA TCGA-CV-5432-01A-02R-1686-07 PFKFB4-COL7A1 1 5 chr3:48521986:- chr3:48571278:- INFRAME NA TCGA-CV-5434-01A-01R-1686-07 PTPRZ1-TSPAN33 14 83 chr7:122055087:+ chr7:129161679:+ INFRAME NA TCGA-CV-5434-01A-01R-1686-07 ROCK1-DCC 10 44 chr18:21006351:- chr18:53386043:+ INFRAME NA TCGA-CV-5434-01A-01R-1686-07 NLK-RAD51D 3 10 chr17:28043331:+ chr17:35106481:- FRAMESHIFT Likely Oncogenic NA TCGA-CV-5434-01A-01R-1686-07 NLK-RAD51L3-RFFL 3 10 chr17:28043331:+ chr17:35106481:- FRAMESHIFT Likely Oncogenic NA TCGA-CV-5436-01A-01R-1514-07 SLX4IP-SLC24A3 2 12 chr20:10458231:+ chr20:19280959:+ FRAMESHIFT NA TCGA-CV-5436-01A-01R-1514-07 AHR-TSPAN13 1 3 chr7:17310123:+ chr7:16783417:+ FRAMESHIFT NA TCGA-CV-5440-01A-01R-1514-07 FHOD3-MS4A15 3 12 chr18:36687178:+ chr11:60763706:+ . NA TCGA-CV-5440-01A-01R-1514-07 DTD1-RALGAPA2 3 6 chr20:18628233:+ chr20:20546832:- INFRAME NA TCGA-CV-5440-01A-01R-1514-07 USP8-MYEF2 2 9 chr15:50490525:+ chr15:48168839:- INFRAME NA TCGA-CV-5441-01A-01R-1514-07 DDX1-C3orf67 1 1 chr2:15596763:+ chr3:58806456:- INFRAME NA TCGA-CV-5442-01A-01R-1514-07 PKP1-JUP 3 7 chr1:201332903:+ chr17:41755174:- . NA TCGA-CV-5443-01A-01R-1514-07 ITCH-DEFB118 47 258 chr20:34471515:+ chr20:31372857:+ FRAMESHIFT NA TCGA-CV-5443-01A-01R-1514-07 SLC26A11-OAF 2 11 chr17:80237594:+ chr11:120228868:+ INFRAME NA TCGA-CV-5443-01A-01R-1514-07 PLGRKT-CD274 1 10 chr9:5431897:- chr9:5456100:+ . NA TCGA-CV-5444-01A-02R-1514-07 ESYT2-CNTNAP2 1 20 chr7:158748194:- chr7:147043907:+ INFRAME NA TCGA-CV-5444-01A-02R-1514-07 PRR4-SPSB2 2 9 chr12:11121010:- chr12:6882287:- . NA TCGA-CV-5970-01A-11R-1686-07 ACAP2-IQCG 1 26 chr3:195442795:- chr3:197914042:- FRAMESHIFT NA TCGA-CV-5970-01A-11R-1686-07 HSPB11-ZCCHC11 1 6 chr1:53939985:- chr1:52497183:- FRAMESHIFT NA TCGA-CV-5971-01A-11R-1686-07 MYBPC2-DES 1 9 chr19:50452003:+ chr2:219421340:+ INFRAME NA TCGA-CV-5973-01A-11R-1686-07 NFYA-TSPO2 4 36 chr6:41094497:+ chr6:41042966:+ . NA TCGA-CV-5973-01A-11R-1686-07 OTUB1-RPS6KA4 3 14 chr11:63988752:+ chr11:64365301:+ INFRAME NA TCGA-CV-5978-01A-11R-1686-07 ADD1-ADK 7 30 chr4:2844024:+ chr10:74394141:+ . NA TCGA-CV-5979-01A-11R-1686-07 GABARAP-GPS2 28 63 chr17:7241424:- chr17:7314659:- . NA TCGA-CV-5979-01A-11R-1686-07 IPO9-CSRP1 1 1 chr1:201871327:+ chr1:201496304:- . NA TCGA-CV-6433-01A-11R-1686-07 RALY-ASXL1 3 12 chr20:34031604:+ chr20:32428128:+ . Likely Oncogenic NA TCGA-CV-6441-01A-11R-1686-07 HSPB11-NDC1 5 54 chr1:53923904:- chr1:53772489:- INFRAME NA TCGA-CV-6441-01A-11R-1686-07 OPA3-EML2 3 30 chr19:45584623:- chr19:45642352:- INFRAME NA TCGA-CV-6933-01A-11R-1915-07 CLNS1A-DCBLD1 2 1 chr11:77637590:- chr6:117532260:+ FRAMESHIFT NA TCGA-CV-6935-01A-11R-1915-07 ATAD2-ERBB4 5 24 chr8:123369058:- chr2:211665477:- FRAMESHIFT Likely Oncogenic NA TCGA-CV-6936-01A-11R-1915-07 LMAN2L-FAM178B 2 29 chr2:96734409:- chr2:96929320:- INFRAME NA TCGA-CV-6937-01A-11R-2016-07 PI4KA-CCDC74BP1 48 193 chr22:20793193:- chr22:20592100:- . NA TCGA-CV-6937-01A-11R-2016-07 FKBP1A-CDS2 10 64 chr20:1392834:- chr20:5189067:+ FRAMESHIFT NA TCGA-CV-6937-01A-11R-2016-07 ATP11B-TFRC 4 30 chr3:182869331:+ chr3:196058632:- INFRAME NA TCGA-CV-6937-01A-11R-2016-07 SMPD4P1-KLHL22 6 10 chr22:20613663:- chr22:20471515:- . NA TCGA-CV-6937-01A-11R-2016-07 KIAA1549L-WARS2 4 10 chr11:33574873:+ chr1:119076607:- FRAMESHIFT NA TCGA-CV-6937-01A-11R-2016-07 KLHL22-KIAA1549L 1 5 chr22:20464858:- chr11:33656012:+ FRAMESHIFT NA TCGA-CV-6938-01A-11R-1915-07 MBD5-ACVR2A 1 6 chr2:148021684:+ chr2:147896301:+ . NA TCGA-CV-6939-01A-11R-1915-07 ZNF718-PLEKHG4B 4 28 chr4:131505:+ chr5:139483:+ FRAMESHIFT NA TCGA-CV-6939-01A-11R-1915-07 NAALADL1-PATL1 1 14 chr11:65045822:- chr11:59654072:- INFRAME NA TCGA-CV-6939-01A-11R-1915-07 LRP5-HSCB 1 2 chr11:68446533:+ chr22:28743882:+ INFRAME NA TCGA-CV-6940-01A-11R-1915-07 NAA25-SLC25A21 18 154 chr12:112087683:- chr14:36684925:- INFRAME NA TCGA-CV-6940-01A-11R-1915-07 FAM234A-LUC7L 2 24 chr16:249658:+ chr16:208188:- . NA TCGA-CV-6941-01A-11R-1915-07 EGFR-ACADM 32 172 chr7:55019365:+ chr1:75732644:+ INFRAME Likely Oncogenic NA TCGA-CV-6941-01A-11R-1915-07 TBC1D22A-GCAT 5 27 chr22:46997709:+ chr22:37810027:+ INFRAME NA TCGA-CV-6941-01A-11R-1915-07 LPP-P3H2 2 32 chr3:188609844:+ chr3:189995442:- INFRAME NA TCGA-CV-6941-01A-11R-1915-07 LIMK2-ATXN10 3 22 chr22:31258426:+ chr22:45806959:+ INFRAME NA TCGA-CV-6941-01A-11R-1915-07 TP63-CYTH3 4 16 chr3:189808526:+ chr7:6190531:- FRAMESHIFT NA TCGA-CV-6941-01A-11R-1915-07 CELSR1-PACSIN2 4 12 chr22:46463707:- chr22:42912157:- . NA TCGA-CV-6941-01A-11R-1915-07 ATXN10-TUBGCP6 2 13 chr22:45740538:+ chr22:50228028:- INFRAME NA TCGA-CV-6941-01A-11R-1915-07 FUS-PRSS36 1 11 chr16:31184396:+ chr16:31149731:- INFRAME NA TCGA-CV-6941-01A-11R-1915-07 SH3BP1-CACNA1I 2 7 chr22:37643788:+ chr22:39661965:+ INFRAME NA TCGA-CV-6941-01A-11R-1915-07 ARHGEF2-SMG5 1 9 chr1:155978067:- chr1:156274686:- . NA TCGA-CV-6941-01A-11R-1915-07 PRR14L-SOX10 2 5 chr22:31738387:- chr22:37983868:- . NA TCGA-CV-6941-01A-11R-1915-07 SMARCB1-ACR 1 8 chr22:23825415:+ chr22:50744061:+ FRAMESHIFT Likely Oncogenic NA TCGA-CV-6948-01A-11R-1915-07 TTC38-NACAP1 33 136 chr22:46278661:+ chr8:101367623:+ . NA TCGA-CV-6948-01A-11R-1915-07 ZNF410-LIN52 5 38 chr14:73909430:+ chr14:74198922:+ INFRAME NA TCGA-CV-6948-01A-11R-1915-07 YME1L1-ANKRD26 4 37 chr10:27142387:- chr10:26995147:- FRAMESHIFT NA TCGA-CV-6948-01A-11R-1915-07 DGCR8-SGSM1 5 30 chr22:20080383:+ chr22:24844897:+ . NA TCGA-CV-6948-01A-11R-1915-07 MKRN2-C12orf75 2 22 chr3:12576741:+ chr12:105326970:+ . NA TCGA-CV-6948-01A-11R-1915-07 ERC1-GRK3 1 17 chr12:991487:+ chr22:25604377:+ . NA TCGA-CV-6948-01A-11R-1915-07 LHPP-TANGO6 2 11 chr10:124484326:+ chr16:69022828:+ INFRAME NA TCGA-CV-6948-01A-11R-1915-07 MRPS6-MYO3A 2 11 chr21:34073745:+ chr10:26201265:+ INFRAME NA TCGA-CV-6948-01A-11R-1915-07 SLC5A3-MYO3A 2 11 chr21:34073745:+ chr10:26201265:+ . NA TCGA-CV-6948-01A-11R-1915-07 ATP10D-GABRB1 1 3 chr4:47485519:+ chr4:47031914:+ . NA TCGA-CV-6950-01A-11R-1915-07 ABL1-EXOSC2 2 11 chr9:130714455:+ chr9:130695492:+ FRAMESHIFT Likely Oncogenic NA TCGA-CV-6951-01A-11R-1915-07 AAMDC-SCGB1D1 1 4 chr11:77842628:+ chr11:62192056:+ FRAMESHIFT NA TCGA-CV-6953-01A-11R-1915-07 USP9X-MRPS31 3 61 chrX:41162877:+ chr13:40729601:- FRAMESHIFT NA TCGA-CV-6953-01A-11R-1915-07 S100A9-IGHG1 3 59 chr1:153358361:+ chr14:105742844:- FRAMESHIFT NA TCGA-CV-6953-01A-11R-1915-07 SELENOW-EHD2 3 34 chr19:47780749:+ chr19:47716558:+ . NA TCGA-CV-6953-01A-11R-1915-07 ROCK1-B4GALT6 5 18 chr18:21110818:- chr18:31666372:- FRAMESHIFT NA TCGA-CV-6953-01A-11R-1915-07 IKBKG-GAB3 3 21 chrX:154547745:+ chrX:154716329:- . NA TCGA-CV-6953-01A-11R-1915-07 TRAPPC9-PTK2 3 19 chr8:140405577:- chr8:140686694:- INFRAME NA TCGA-CV-6953-01A-11R-1915-07 ASCC1-MICU1 2 3 chr10:72196811:- chr10:72408037:- INFRAME NA TCGA-CV-6953-01A-11R-1915-07 PARD3-HTRA1 1 6 chr10:34331117:- chr10:122488902:+ INFRAME NA TCGA-CV-6953-01A-11R-1915-07 SPRR2E-SPRR2G 1000 1000 chr1:153093553:- chr1:153150031:- INFRAME NA TCGA-CV-6954-01A-11R-1915-07 FHOD3-MOCOS 2 14 chr18:36372744:+ chr18:36256968:+ INFRAME NA TCGA-CV-6956-01A-21R-2016-07 FSCN1-FBXL18 6 21 chr7:5605384:+ chr7:5438651:- . NA TCGA-CV-6959-01A-11R-1915-07 TPX2-RALY 19 81 chr20:31778984:+ chr20:34072066:+ . NA TCGA-CV-6961-01A-21R-1915-07 TMED10-TTLL5 42 164 chr14:75176355:- chr14:75820007:+ INFRAME NA TCGA-CV-6961-01A-21R-1915-07 CUX1-THSD7A 1 26 chr7:102070417:+ chr7:11636961:- INFRAME NA TCGA-CV-6961-01A-21R-1915-07 TTLL5-TMED10 3 10 chr14:75793100:+ chr14:75152143:- INFRAME NA TCGA-CV-6961-01A-21R-1915-07 PCNT-POC1A 1 3 chr21:46391376:+ chr3:52075985:- FRAMESHIFT NA TCGA-CV-6961-01A-21R-1915-07 EED-HIKESHI 1000 1000 chr11:86250449:+ chr11:86306246:+ . NA TCGA-CV-6962-01A-11R-1915-07 C6orf48-TRIM40 3 5 chr6:31837435:+ chr6:30136412:+ . NA TCGA-CV-7090-01A-11R-2016-07 DHX15-RBPJ 6 21 chr4:24548855:- chr4:26386353:+ FRAMESHIFT NA TCGA-CV-7090-01A-11R-2016-07 NRP2-PARD3B 5 14 chr2:205683363:+ chr2:205553324:+ FRAMESHIFT NA TCGA-CV-7091-01A-11R-2016-07 XPR1-TOR3A 25 111 chr1:180836716:+ chr1:179097828:+ INFRAME NA TCGA-CV-7097-01A-11R-2016-07 MCTP1-TNC 9 18 chr5:94923962:- chr9:115021267:- INFRAME NA TCGA-CV-7097-01A-11R-2016-07 HELZ2-FNDC11 3 9 chr20:63572108:- chr20:63555654:+ . NA TCGA-CV-7099-01A-41R-2016-07 LINC-PINT-GNGT1 5 3 chr7:131052425:- chr7:93886506:+ . NA TCGA-CV-7099-01A-41R-2016-07 DLST-AHSA1 1 1 chr14:74889349:+ chr14:77464598:+ INFRAME NA TCGA-CV-7100-01A-11R-2016-07 LDLR-HSH2D 89 347 chr19:11089615:+ chr19:16152552:+ FRAMESHIFT NA TCGA-CV-7100-01A-11R-2016-07 SART1-CNTN5 6 21 chr11:65967821:+ chr11:99819544:+ FRAMESHIFT NA TCGA-CV-7101-01A-11R-2016-07 RIOK3-TAF4B 11 34 chr18:23453502:+ chr18:26389845:+ INFRAME NA TCGA-CV-7101-01A-11R-2016-07 GGCT-ZNRF2 2 13 chr7:30498803:- chr7:30323642:+ FRAMESHIFT NA TCGA-CV-7101-01A-11R-2016-07 TBL1XR1-KIAA1456 1 9 chr3:177197121:- chr8:13006202:+ . NA TCGA-CV-7102-01A-11R-2016-07 MGRN1-SNX29 4 11 chr16:4665151:+ chr16:12477719:+ INFRAME NA TCGA-CV-7102-01A-11R-2016-07 EFL1-CDADC1 3 9 chr15:82214717:- chr13:49274291:+ INFRAME NA TCGA-CV-7103-01A-21R-2016-07 ACTL6A-ALG3 36 129 chr3:179570241:+ chr3:184245812:- INFRAME NA TCGA-CV-7103-01A-21R-2016-07 DNAJC19-ADK 19 112 chr3:180988023:- chr10:74525256:+ INFRAME NA TCGA-CV-7103-01A-21R-2016-07 FRMD6-ABHD12B 2 1 chr14:51491534:+ chr14:50901829:+ . NA TCGA-CV-7104-01A-11R-2016-07 LAMA3-SNRPD1 34 217 chr18:23777619:+ chr18:21629062:+ INFRAME NA TCGA-CV-7104-01A-11R-2016-07 CD72-TLN1 1 34 chr9:35646403:- chr9:35703676:- . NA TCGA-CV-7104-01A-11R-2016-07 ACTB-COL17A1 1 7 chr7:5529535:- chr10:104041344:- FRAMESHIFT NA TCGA-CV-7177-01A-11R-2016-07 PSMD1-ATP2C1 2 33 chr2:231146356:+ chr3:130940630:+ INFRAME NA TCGA-CV-7177-01A-11R-2016-07 DIP2C-TECTA 1 8 chr10:472439:- chr11:121125302:+ FRAMESHIFT NA TCGA-CV-7235-01A-11R-2016-07 SLC39A6-MAST2 20 34 chr18:36114097:- chr1:46019596:+ FRAMESHIFT NA TCGA-CV-7235-01A-11R-2016-07 MACF1-AKIRIN1 18 38 chr1:39105717:+ chr1:38998171:+ INFRAME NA TCGA-CV-7235-01A-11R-2016-07 CAP1-KCNQ4 19 32 chr1:40061812:+ chr1:40819875:+ INFRAME NA TCGA-CV-7235-01A-11R-2016-07 ARHGAP42-YAP1 5 25 chr11:100687832:+ chr11:102205893:+ INFRAME Likely Oncogenic NA TCGA-CV-7235-01A-11R-2016-07 ZNF385B-FKBP7 4 26 chr2:179861101:- chr2:178465931:- . NA TCGA-CV-7235-01A-11R-2016-07 MAST2-CARD16 1 4 chr1:46023980:+ chr11:105044658:- INFRAME NA TCGA-CV-7236-01A-11R-2016-07 RNF216-MTHFD1L 20 63 chr7:5725324:- chr6:151009819:+ INFRAME NA TCGA-CV-7236-01A-11R-2016-07 MTHFD1L-RNF216 2 12 chr6:150972058:+ chr7:5721172:- INFRAME NA TCGA-CV-7238-01A-11R-2016-07 ZC3H3-TOP1MT 5 30 chr8:143536257:- chr8:143331339:- FRAMESHIFT NA TCGA-CV-7238-01A-11R-2016-07 GLIPR2-GALT 2 4 chr9:36150949:+ chr9:34646677:+ . NA TCGA-CV-7238-01A-11R-2016-07 KLHL5-SLC16A2 2 3 chr4:39045096:+ chrX:74520990:+ . NA TCGA-CV-7242-01A-11R-2016-07 PER3-CAMTA1 1 3 chr1:7794008:+ chr1:7732448:+ FRAMESHIFT NA TCGA-CV-7245-01A-11R-2016-07 HNRNPUL1-BCKDHA 11 194 chr19:41281275:+ chr19:41410637:+ INFRAME NA TCGA-CV-7247-01A-11R-2016-07 SRRM2-PRSS33 6 48 chr16:2760499:+ chr16:2786604:- . NA TCGA-CV-7247-01A-11R-2016-07 PANX1-HEPHL1 2 15 chr11:94129493:+ chr11:94093501:+ FRAMESHIFT NA TCGA-CV-7247-01A-11R-2016-07 INIP-C9orf84 3 4 chr9:112716461:- chr9:111786035:- FRAMESHIFT NA TCGA-CV-7248-01A-11R-2016-07 CENPC-STAP1 14 98 chr4:67518156:- chr4:67558752:+ . NA TCGA-CV-7248-01A-11R-2016-07 DST-FBLN5 20 51 chr6:56503997:- chr14:91937201:- FRAMESHIFT NA TCGA-CV-7248-01A-11R-2016-07 MPP6-OSBPL3 6 23 chr7:24623784:+ chr7:24863599:- FRAMESHIFT NA TCGA-CV-7248-01A-11R-2016-07 SACS-PHF3 2 6 chr13:23358335:- chr6:63778066:+ INFRAME NA TCGA-CV-7253-01A-11R-2016-07 DHCR24-PCNX2 105 338 chr1:54854037:- chr1:233179175:- INFRAME NA TCGA-CV-7253-01A-11R-2016-07 PXN-MSI1 43 192 chr12:120221623:- chr12:120343105:- . NA TCGA-CV-7253-01A-11R-2016-07 NOL9-DNAJC11 7 30 chr1:6554107:- chr1:6681037:- INFRAME NA TCGA-CV-7253-01A-11R-2016-07 GRHL2-TRIM13 5 24 chr8:101492789:+ chr13:49997667:+ . NA TCGA-CV-7253-01A-11R-2016-07 RITA1-GRHL2 4 11 chr12:113187048:+ chr8:101543241:+ INFRAME NA TCGA-CV-7253-01A-11R-2016-07 PCNX2-TP73 2 3 chr1:233198939:- chr1:3682333:+ . NA TCGA-CV-7253-01A-11R-2016-07 CSNK1G1-INTS2 1 5 chr15:64300319:- chr17:61869988:- FRAMESHIFT NA TCGA-CV-7253-01A-11R-2016-07 GRHL2-KCNRG 1 2 chr8:101492789:+ chr13:50020214:+ INFRAME NA TCGA-CV-7254-01A-11R-2016-07 RAB3D-DMBT1 1 9 chr19:11337172:- chr10:122635991:+ FRAMESHIFT NA TCGA-CV-7254-01A-11R-2016-07 LAMA3-ADHFE1 1 5 chr18:23810503:+ chr8:66460308:+ INFRAME NA TCGA-CV-7255-01A-11R-2016-07 HIRA-BCL2L13 16 29 chr22:19431440:- chr22:17726677:+ INFRAME NA TCGA-CV-7255-01A-11R-2016-07 AAK1-GALNT14 2 9 chr2:69556860:- chr2:31147110:- . NA TCGA-CV-7255-01A-11R-2016-07 CELSR2-SORT1 1000 1000 chr1:109273892:+ chr1:109312131:- . NA TCGA-CV-7261-01A-11R-2016-07 GOLIM4-SLC40A1 18 58 chr3:168024526:- chr2:189575320:- INFRAME NA TCGA-CV-7261-01A-11R-2016-07 ARHGEF2-UBQLN4 1 5 chr1:155978365:- chr1:156051857:- INFRAME NA TCGA-CV-7261-01A-11R-2016-07 PCCA-FSIP2 1 5 chr13:100157340:+ chr2:185828156:+ FRAMESHIFT NA TCGA-CV-7261-01A-11R-2016-07 SHROOM3-COL8A1 1 2 chr4:76586469:+ chr3:99744897:+ . NA TCGA-CV-7263-01A-11R-2016-07 C1orf21-LAMC1 3 4 chr1:184477603:+ chr1:183116577:+ FRAMESHIFT NA TCGA-CV-7406-01A-11R-2081-07 FBXO28-LYZL2 13 50 chr1:224114396:+ chr10:30612900:- FRAMESHIFT NA TCGA-CV-7406-01A-11R-2081-07 PDE5A-C4orf3 2 27 chr4:119596523:- chr4:119298779:- FRAMESHIFT NA TCGA-CV-7407-01A-11R-2081-07 PTPRD-IDO1 11 68 chr9:8733780:- chr8:39913889:+ . Likely Oncogenic NA TCGA-CV-7407-01A-11R-2081-07 TSHZ3-IFNL1 7 10 chr19:31349180:- chr19:39296805:+ FRAMESHIFT NA TCGA-CV-7407-01A-11R-2081-07 HACL1-METTL6 2 22 chr3:15571668:- chr3:15384187:- FRAMESHIFT NA TCGA-CV-7407-01A-11R-2081-07 PPP1R21-GTF2A1L 4 5 chr2:48511468:+ chr2:48669722:+ INFRAME NA TCGA-CV-7407-01A-11R-2081-07 FNBP1-MFSD14C 1 12 chr9:129957360:- chr9:96918826:- . NA TCGA-CV-7407-01A-11R-2081-07 CALD1-AKR1B15 1 7 chr7:134843971:+ chr7:134564598:+ . NA TCGA-CV-7407-01A-11R-2081-07 CDC42BPA-PRKG1 1 6 chr1:227080893:- chr10:51153164:+ INFRAME NA TCGA-CV-7410-01A-21R-2081-07 LPP-CLSTN2 6 30 chr3:188225527:+ chr3:140532324:+ . NA TCGA-CV-7410-01A-21R-2081-07 APP-TMEM50B 1 33 chr21:26089943:- chr21:33468926:- . NA TCGA-CV-7413-01A-11R-2081-07 KPNA4-IFT80 7 21 chr3:160565214:- chr3:160384646:- . NA TCGA-CV-7413-01A-11R-2081-07 SUPT7L-RBKS 4 9 chr2:27660984:- chr2:27781788:- FRAMESHIFT NA TCGA-CV-7414-01A-11R-2081-07 PIK3R3-ZSWIM5 2 15 chr1:46131847:- chr1:45088237:- INFRAME Likely Oncogenic NA TCGA-CV-7414-01A-11R-2081-07 ITGA2-NDUFS4 1 4 chr5:52989532:+ chr5:53646233:+ INFRAME NA TCGA-CV-7414-01A-11R-2081-07 BICD2-ASPN 1 3 chr9:92715253:- chr9:92466571:- INFRAME NA TCGA-CV-7415-01A-11R-2081-07 GLTSCR1-ZNF793 8 15 chr19:47673762:+ chr19:37548362:+ . NA TCGA-CV-7415-01A-11R-2081-07 SMARCA2-DMRT1 4 28 chr9:2088613:+ chr9:916763:+ INFRAME NA TCGA-CV-7415-01A-11R-2081-07 GTF2IRD1-HSPB1 2 1 chr7:74454176:+ chr7:76303802:+ . NA TCGA-CV-7416-01A-11R-2081-07 TUBGCP3-TFDP1 5 151 chr13:112565111:- chr13:113610996:+ INFRAME NA TCGA-CV-7416-01A-11R-2081-07 CHST11-HCFC2 2 4 chr12:104457514:+ chr12:104066167:+ INFRAME NA TCGA-CV-7416-01A-11R-2081-07 RSPH3-MIF4GD 1000 1000 chr6:158999712:- chr17:75268192:- INFRAME NA TCGA-CV-7418-01A-11R-2081-07 LRP5-CLPB 6 29 chr11:68312805:+ chr11:72359008:- INFRAME NA TCGA-CV-7418-01A-11R-2081-07 NIPBL-SPEF2 6 15 chr5:36958231:+ chr5:35753624:+ FRAMESHIFT NA TCGA-CV-7418-01A-11R-2081-07 FOXK2-FN3KRP 4 19 chr17:82582934:+ chr17:82726480:+ FRAMESHIFT NA TCGA-CV-7418-01A-11R-2081-07 PMS1-HIBCH 2 4 chr2:189873656:+ chr2:190246212:- INFRAME NA TCGA-CV-7421-01A-11R-2081-07 EWSR1-ABR 14 48 chr22:29273864:+ chr17:1125367:- INFRAME Likely Oncogenic NA TCGA-CV-7421-01A-11R-2081-07 VPS41-AES 10 37 chr7:38789801:- chr19:3054194:- FRAMESHIFT NA TCGA-CV-7421-01A-11R-2081-07 PLAT-EFCAB8 5 15 chr8:42207494:- chr20:32943636:+ . NA TCGA-CV-7421-01A-11R-2081-07 BCR-TOM1 3 12 chr22:23182239:+ chr22:35327271:+ FRAMESHIFT NA TCGA-CV-7421-01A-11R-2081-07 PLA2G6-SCARF2 4 7 chr22:38142050:- chr22:20426020:- . NA TCGA-CV-7421-01A-11R-2081-07 TPX2-DUSP15 2 14 chr20:31760179:+ chr20:31850676:- FRAMESHIFT NA TCGA-CV-7422-01A-21R-2081-07 TRABD-DDR2 5 17 chr22:50185976:+ chr1:162655211:+ . NA TCGA-CV-7422-01A-21R-2081-07 ARFIP1-DCTD 2 1 chr4:152780226:+ chr4:182915575:- . NA TCGA-CV-7422-01A-21R-2081-07 ANKRD42-PICALM 1 1 chr11:83198642:+ chr11:85959060:- INFRAME NA TCGA-CV-7424-01A-11R-2081-07 DTNB-CNOT4 6 16 chr2:25451548:- chr7:135422353:- INFRAME NA TCGA-CV-7424-01A-11R-2081-07 AP2A2-TRIM22 4 7 chr11:926088:+ chr11:5697248:+ FRAMESHIFT NA TCGA-CV-7424-01A-11R-2081-07 PPIL2-KIAA1671 1 3 chr22:21683257:+ chr22:25181699:+ INFRAME NA TCGA-CV-7424-01A-11R-2081-07 ANKIB1-GNAI1 1 1 chr7:92392292:+ chr7:80199225:+ INFRAME NA TCGA-CV-7429-01A-11R-2132-07 GNA13-BMI1 9 51 chr17:65053502:- chr10:22328134:+ FRAMESHIFT NA TCGA-CV-7430-01A-11R-2132-07 ELP3-MYO5C 9 33 chr8:28158633:+ chr15:52208643:- INFRAME NA TCGA-CV-7430-01A-11R-2132-07 IRAK2-SRGAP3 8 36 chr3:10165048:+ chr3:9124917:- INFRAME NA TCGA-CV-7430-01A-11R-2132-07 PDLIM1-SORBS1 2 6 chr10:95263864:- chr10:95322021:- FRAMESHIFT NA TCGA-CV-7433-01A-11R-2132-07 LAMB3-NAMPT 3 11 chr1:209622536:- chr7:106254504:- FRAMESHIFT NA TCGA-CV-7433-01A-11R-2132-07 MFF-COL4A3 4 6 chr2:227328789:+ chr2:227282365:+ . NA TCGA-CV-7434-01A-11R-2132-07 PQLC1-HSBP1L1 28 210 chr18:79943329:- chr18:79966612:+ FRAMESHIFT NA TCGA-CV-7434-01A-11R-2132-07 OPA1-ATP13A4 8 24 chr3:193593409:+ chr3:193459231:- INFRAME NA TCGA-CV-7435-01A-11R-2132-07 NEDD4L-UBE2G1 8 68 chr18:58165861:+ chr17:4307123:- FRAMESHIFT NA TCGA-CV-7437-01A-21R-2132-07 DPY19L1-SDK1 3 21 chr7:35010468:- chr7:3821450:+ INFRAME NA TCGA-CV-7438-01A-21R-2132-07 PPP1R12A-TPGS2 1 2 chr12:79934695:- chr18:36818973:- FRAMESHIFT NA TCGA-CV-7440-01A-11R-2132-07 KMT2C-GTF2IRD1 29 35 chr7:152205106:- chr7:74589851:+ INFRAME Likely Oncogenic NA TCGA-CV-A45P-01A-11R-A24H-07 EXOC2-FRMD4B 1 28 chr6:488979:- chr3:69336586:- . NA TCGA-CV-A45R-01A-11R-A24H-07 REV1-TMEM131 2 7 chr2:99489817:- chr2:97776018:- . NA TCGA-CV-A45T-01A-11R-A24H-07 SEC23B-ZCCHC7 8 26 chr20:18525932:+ chr9:37349357:+ INFRAME NA TCGA-CV-A45T-01A-11R-A24H-07 DENND1A-ENG 2 8 chr9:123557570:- chr9:127818832:- INFRAME NA TCGA-CV-A45T-01A-11R-A24H-07 ZCCHC7-SEC23B 1 6 chr9:37327834:+ chr20:18542296:+ INFRAME NA TCGA-CV-A45U-01A-12R-A24H-07 C11orf68-DRAP1 21 32 chr11:65919042:- chr11:65920019:+ . NA TCGA-CV-A45W-01A-11R-A24Z-07 C14orf2-BRF1 14 33 chr14:103921470:- chr14:105252579:- . NA TCGA-CV-A45X-01A-21R-A24Z-07 VPS53-ABR 6 21 chr17:697418:- chr17:1100735:- INFRAME NA TCGA-CV-A45X-01A-21R-A24Z-07 PPFIA1-RBM4 6 20 chr11:70272436:+ chr11:66639700:+ . NA TCGA-CV-A45X-01A-21R-A24Z-07 KREMEN1-MAPK1 2 4 chr22:29073227:+ chr22:21769320:- FRAMESHIFT NA TCGA-CV-A45X-01A-21R-A24Z-07 ADAM9-ERCC8 1 2 chr8:39091346:+ chr5:60928959:- FRAMESHIFT NA TCGA-CV-A45Y-01A-11R-A24Z-07 CAPS2-KCNC2 2 4 chr12:75371079:- chr12:75051317:- . NA TCGA-CV-A461-01A-41R-A266-07 MOB3A-DAND5 6 13 chr19:2078140:- chr19:12973389:+ FRAMESHIFT NA TCGA-CV-A464-01A-11R-A266-07 ZNF462-RAD23B 2 15 chr9:106984409:+ chr9:107306379:+ INFRAME NA TCGA-CV-A465-01A-11R-A266-07 ZNF267-GPR180 5 36 chr16:31885256:+ chr13:94621078:+ INFRAME NA TCGA-CV-A465-01A-11R-A266-07 MRPL30-FAM178B 8 2 chr2:99181249:+ chr2:96960440:- . NA TCGA-CV-A6JD-01A-11R-A31N-07 YWHAZ-UBA1 2 1 chr8:100951929:- chrX:47198803:+ . NA TCGA-CV-A6JE-01A-11R-A31N-07 HELZ-PSMD12 8 69 chr17:67151046:- chr17:67341052:- FRAMESHIFT NA TCGA-CV-A6JN-01A-11R-A31N-07 CTTN-FHIT 2 36 chr11:70422995:+ chr3:60014075:- INFRAME NA TCGA-CV-A6JU-01A-11R-A31N-07 IGSF3-C1orf137 15 48 chr1:116666284:- chr1:116694759:+ . NA TCGA-CX-7085-01A-21R-2016-07 SPRR2G-SPRR2D 1000 1000 chr1:153150014:- chr1:153040291:- INFRAME NA TCGA-CX-7086-01A-11R-2081-07 TBC1D10A-POLR3H 8 20 chr22:30299444:- chr22:41540795:- INFRAME NA TCGA-CX-7086-01A-11R-2081-07 CBX7-VPREB1 4 14 chr22:39149789:- chr22:22244946:+ FRAMESHIFT NA TCGA-CX-7086-01A-11R-2081-07 BCR-UPB1 1 14 chr22:23182239:+ chr22:24500107:+ FRAMESHIFT NA TCGA-CX-7086-01A-11R-2081-07 OSBP2-NF2 1 12 chr22:30870682:+ chr22:29642202:+ INFRAME Likely Oncogenic NA TCGA-CX-7086-01A-11R-2081-07 CRCT1-SPRR2A 1000 1000 chr1:152516010:+ chr1:153056653:- . NA TCGA-CX-7219-01A-11R-2016-07 EMP2-SORL1 24 0 chr16:10532204:- chr11:121590488:+ . NA TCGA-D6-6515-01A-21R-1873-07 NDUFA7-PRKCG 22 78 chr19:8316496:- chr19:53903073:+ FRAMESHIFT NA TCGA-D6-6517-01A-11R-1873-07 IFT20-VTN 12 123 chr17:28335340:- chr17:28370270:- . NA TCGA-D6-6517-01A-11R-1873-07 DST-HMGN1 6 8 chr6:56458370:- chr21:39349057:- . NA TCGA-D6-6517-01A-11R-1873-07 F3-C11orf80 2 2 chr1:94541537:- chr11:66816053:+ INFRAME NA TCGA-D6-6825-01A-21R-1915-07 LAMB3-NAB1 15 19 chr1:209622536:- chr2:190673101:+ FRAMESHIFT NA TCGA-D6-6825-01A-21R-1915-07 USP16-CNBD2 4 27 chr21:29030773:+ chr20:35972629:+ INFRAME NA TCGA-D6-6826-01A-11R-1915-07 VGLL4-CHL1 11 102 chr3:11601833:- chr3:377818:+ INFRAME NA TCGA-D6-6826-01A-11R-1915-07 RNF130-TBC1D9B 1 5 chr5:180013061:- chr5:179904812:- FRAMESHIFT NA TCGA-D6-6826-01A-11R-1915-07 SDK2-CDC42EP4 1000 1000 chr17:73365258:- chr17:73286612:- . NA TCGA-D6-6827-01A-11R-1915-07 RB1-HTR2C 5 28 chr13:48307406:+ chrX:114906589:+ FRAMESHIFT Likely Oncogenic NA TCGA-D6-6827-01A-11R-1915-07 USPL1-RB1 4 5 chr13:30618056:+ chr13:48342599:+ . Likely Oncogenic NA TCGA-D6-8568-01A-11R-2403-07 NLRC5-CYB5B 15 62 chr16:57017188:+ chr16:69459093:+ . NA TCGA-D6-8568-01A-11R-2403-07 OTUB1-GBA 1 2 chr11:64001520:+ chr1:155238650:- FRAMESHIFT NA TCGA-D6-8569-01A-11R-2403-07 COL5A1-SPATA31D3 9 22 chr9:134772834:+ chr9:81946468:+ FRAMESHIFT NA TCGA-D6-8569-01A-11R-2403-07 CAMSAP1-SDCCAG3 2 23 chr9:135907000:- chr9:136407938:- INFRAME NA TCGA-D6-8569-01A-11R-2403-07 RXRA-PRRC2B 2 9 chr9:134421805:+ chr9:131430090:+ . NA TCGA-D6-A4Z9-01A-11R-A24Z-07 DYRK1A-IFNGR2 10 15 chr21:37367628:+ chr21:33421480:+ . NA TCGA-D6-A4Z9-01A-11R-A24Z-07 DIP2A-NRIP1 3 12 chr21:46509376:+ chr21:14968526:- . NA TCGA-D6-A4ZB-01A-11R-A24Z-07 PRMT2-WRB 3 8 chr21:46649739:+ chr21:39390698:+ INFRAME NA TCGA-D6-A4ZB-01A-11R-A24Z-07 C1S-PTPRO 2 5 chr12:7063067:+ chr12:15410280:+ . NA TCGA-D6-A4ZB-01A-11R-A24Z-07 SCAPER-TMEM266 2 5 chr15:76404524:- chr15:76134168:+ . NA TCGA-D6-A6EM-01A-21R-A31N-07 ITGB5-FGL1 1 6 chr3:124901266:- chr8:17885571:- . NA TCGA-D6-A6EN-01A-11R-A31N-07 MINK1-ALOX12 6 25 chr17:4833640:+ chr17:7000336:+ INFRAME NA TCGA-D6-A6EO-01A-11R-A31N-07 FAM160A1-HPF1 6 32 chr4:151409465:+ chr4:169753835:- . NA TCGA-D6-A6ES-01A-12R-A31N-07 PSMC6-KANSL2 3 1 chr14:52711524:+ chr12:48655060:- INFRAME NA TCGA-D6-A74Q-01A-11R-A34R-07 STIP1-UBE2G1 16 45 chr11:64186270:+ chr17:4307123:- FRAMESHIFT NA TCGA-D6-A74Q-01A-11R-A34R-07 ANKRD12-RIOK3 1 3 chr18:9137873:+ chr18:23462964:+ . NA TCGA-DQ-5624-01A-01R-1873-07 ERP44-CHRDL2 53 246 chr9:100052417:- chr11:74718832:- INFRAME NA TCGA-DQ-5624-01A-01R-1873-07 SLC2A11-LLPH 15 99 chr22:23875241:+ chr12:66124018:- INFRAME NA TCGA-DQ-5624-01A-01R-1873-07 ALG10B-IGFBP6 10 36 chr12:38318458:+ chr12:53102045:+ INFRAME NA TCGA-DQ-5624-01A-01R-1873-07 ALG10-IGFBP6 1000 1000 chr12:34024159:+ chr12:53102045:+ INFRAME NA TCGA-DQ-5629-01A-01R-1873-07 TMEM11-UBAP1 2 27 chr17:21214091:- chr9:34220908:+ FRAMESHIFT NA TCGA-DQ-5629-01A-01R-1873-07 PPP1R37-ZNF225 2 6 chr19:45093527:+ chr19:44115760:+ . NA TCGA-DQ-5630-01A-01R-1873-07 DCLRE1C-OR7E26P 8 32 chr10:14949036:- chr10:15000006:- . NA TCGA-DQ-5630-01A-01R-1873-07 SWAP70-WEE1 2 10 chr11:9694286:+ chr11:9581532:+ FRAMESHIFT NA TCGA-DQ-5630-01A-01R-1873-07 STN1-SH3PXD2A 1000 1000 chr10:103882645:- chr10:103801362:- . NA TCGA-DQ-5631-01A-01R-1873-07 VSTM2L-RPRD1B 4 24 chr20:37933589:+ chr20:38089726:+ INFRAME NA TCGA-DQ-7588-01A-11R-2081-07 FAT1-CFAP97 15 653 chr4:186633684:- chr4:185164179:- INFRAME Likely Oncogenic NA TCGA-DQ-7591-01A-11R-2081-07 KPNA6-RHCE 54 74 chr1:32108134:+ chr1:25370540:- INFRAME NA TCGA-DQ-7591-01A-11R-2081-07 WDTC1-TMEM39B 6 52 chr1:27234951:+ chr1:32074951:+ . NA TCGA-DQ-7591-01A-11R-2081-07 MAD1L1-SERGEF 9 23 chr7:2149152:- chr11:17788413:- FRAMESHIFT NA TCGA-DQ-7591-01A-11R-2081-07 PARD6G-CHST1 2 22 chr18:80202710:- chr11:45652606:- . NA TCGA-DQ-7591-01A-11R-2081-07 KIF3B-NINL 4 7 chr20:32316874:+ chr20:25526598:- . NA TCGA-DQ-7591-01A-11R-2081-07 CS-MUCL1 3 6 chr12:56291631:- chr12:54858193:+ . NA TCGA-DQ-7591-01A-11R-2081-07 GINS1-DEFB123 1 14 chr20:25407895:+ chr20:31450029:+ FRAMESHIFT NA TCGA-DQ-7591-01A-11R-2081-07 DNAJC8-KDF1 1 8 chr1:28232921:- chr1:26952412:- . NA TCGA-DQ-7591-01A-11R-2081-07 NAV1-HN1L 1 7 chr1:201649425:+ chr16:1691843:+ INFRAME NA TCGA-DQ-7591-01A-11R-2081-07 PHB2-RBP5 2 3 chr12:6970196:- chr12:7124730:- FRAMESHIFT NA TCGA-DQ-7591-01A-11R-2081-07 TASP1-AHCY 1 7 chr20:13528446:- chr20:34295585:- FRAMESHIFT NA TCGA-DQ-7591-01A-11R-2081-07 SNRNP40-EPB41 1 3 chr1:31289254:- chr1:29039254:+ FRAMESHIFT NA TCGA-DQ-7592-01A-11R-2081-07 DHTKD1-CDC123 13 65 chr10:12069187:+ chr10:12230948:+ INFRAME NA TCGA-DQ-7592-01A-11R-2081-07 FRS2-LEMD3 2 25 chr12:69470530:+ chr12:65210926:+ . NA TCGA-DQ-7592-01A-11R-2081-07 SMO-STRIP2 1 2 chr7:129209397:+ chr7:129464612:+ INFRAME NA TCGA-DQ-7593-01A-11R-2232-07 WDR11-PDLIM1 4 22 chr10:120905416:+ chr10:95271784:- INFRAME NA TCGA-F7-7848-01A-11R-2132-07 MRPL21-SHANK2 43 166 chr11:68892890:- chr11:70473439:- INFRAME NA TCGA-F7-7848-01A-11R-2132-07 RPS6KB2-PCNX3 11 99 chr11:67429240:+ chr11:65617940:+ FRAMESHIFT NA TCGA-F7-7848-01A-11R-2132-07 C11orf80-TSGA10IP 4 20 chr11:66759096:+ chr11:65945715:+ FRAMESHIFT NA TCGA-F7-7848-01A-11R-2132-07 DYNLL1-COQ5 1 7 chr12:120470104:+ chr12:120510123:- . NA TCGA-F7-8298-01A-11R-2403-07 METTL16-DHX8 8 7 chr17:2473524:- chr17:43489449:+ INFRAME NA TCGA-F7-8298-01A-11R-2403-07 HELZ-WIPF2 2 21 chr17:67239433:- chr17:40256391:+ . NA TCGA-F7-8489-01A-31R-2403-07 CASP1-TTC6 3 23 chr11:105033064:- chr14:37802094:+ . NA TCGA-F7-8489-01A-31R-2403-07 ZFHX3-PMFBP1 1 2 chr16:72889731:- chr16:72120089:- FRAMESHIFT NA TCGA-F7-A50G-01A-11R-A266-07 AEBP2-GYS2 24 93 chr12:19493986:+ chr12:21546470:- FRAMESHIFT NA TCGA-F7-A50I-01A-11R-A28V-07 CLSTN1-PIK3CD-AS2 4 66 chr1:9773272:- chr1:9672719:- . NA TCGA-F7-A50I-01A-11R-A28V-07 CCDC47-USP37 1 8 chr17:63760914:- chr2:218553724:- INFRAME NA TCGA-F7-A50I-01A-11R-A28V-07 UTP6-BCAS3 2 3 chr17:31887236:- chr17:61034666:+ FRAMESHIFT NA TCGA-F7-A61V-01A-11R-A28V-07 KXD1-CRLF1 1 12 chr19:18565021:+ chr19:18573007:- . NA TCGA-F7-A61W-01A-11R-A28V-07 C10orf76-LDB1 2 13 chr10:102056085:- chr10:102111536:- . NA TCGA-F7-A61W-01A-11R-A28V-07 AKR1A1-AGO3 3 6 chr1:45561878:+ chr1:36004341:+ FRAMESHIFT NA TCGA-F7-A620-01A-11R-A28V-07 F3-C11orf80 1 1 chr1:94541537:- chr11:66816053:+ INFRAME NA TCGA-F7-A623-01A-11R-A28V-07 PPIG-SSB 5 27 chr2:169614681:+ chr2:169805474:+ INFRAME NA TCGA-F7-A623-01A-11R-A28V-07 SMAP1-KHDC1 5 11 chr6:70798737:+ chr6:73292040:- FRAMESHIFT NA TCGA-F7-A623-01A-11R-A28V-07 FUT10-RNF122 5 8 chr8:33473064:- chr8:33558771:- . NA TCGA-F7-A623-01A-11R-A28V-07 BECN1-GPATCH8 4 7 chr17:42813948:- chr17:44438715:- . NA TCGA-F7-A623-01A-11R-A28V-07 KIF13B-SLC25A21 1 14 chr8:29099133:- chr14:36875004:- INFRAME NA TCGA-F7-A623-01A-11R-A28V-07 TANC2-CEP112 2 8 chr17:63099357:+ chr17:65961598:- FRAMESHIFT NA TCGA-F7-A623-01A-11R-A28V-07 VTI1A-ACSL5 1 9 chr10:112464657:+ chr10:112394918:+ FRAMESHIFT NA TCGA-H7-A6C4-01A-11R-A30B-07 UBAC2-CLYBL 1 18 chr13:99244624:+ chr13:99772824:+ INFRAME NA TCGA-H7-A6C4-01A-11R-A30B-07 WWC2-CCDC110 2 7 chr4:183099622:+ chr4:185471049:- FRAMESHIFT NA TCGA-H7-A76A-01A-51R-A34R-07 DENND1A-NDUFA8 4 17 chr9:123609436:- chr9:122152408:- INFRAME NA TCGA-HD-7229-01A-11R-2016-07 CHRM3-FMN2 4 16 chr1:239827378:+ chr1:240472372:+ . NA TCGA-HD-7229-01A-11R-2016-07 PHF21A-MIR670HG 4 6 chr11:46076754:- chr11:43569767:+ . NA TCGA-HD-7229-01A-11R-2016-07 JAK2-GLDC 1 2 chr9:5029906:+ chr9:6565429:- INFRAME Likely Oncogenic NA TCGA-HD-7753-01A-11R-2081-07 NSD2-PIBF1 65 239 chr4:1871542:+ chr13:72965274:+ . NA TCGA-HD-7753-01A-11R-2081-07 PARD6G-RFTN2 17 102 chr18:80247277:- chr2:197572280:- INFRAME NA TCGA-HD-7753-01A-11R-2081-07 LAMC2-WASHC3 11 46 chr1:183231103:+ chr12:102046119:- INFRAME NA TCGA-HD-7753-01A-11R-2081-07 FILIP1L-IMPG2 8 16 chr3:99876072:- chr3:101269573:- . NA TCGA-HD-7753-01A-11R-2081-07 VRK1-SAMD4A 1 3 chr14:96860735:+ chr14:54702062:+ FRAMESHIFT NA TCGA-HD-7831-01A-11R-2132-07 IGKV1OR2-6-IGKC 3 49 chr2:97355327:+ chr2:88857683:- . NA TCGA-HD-7831-01A-11R-2132-07 FAM49B-CCDC26 3 17 chr8:129850835:- chr8:129399684:- . NA TCGA-HD-7831-01A-11R-2132-07 COL6A2-MYH9 1 7 chr21:46122158:+ chr22:36299042:- INFRAME NA TCGA-HD-7832-01A-11R-2132-07 SEC24A-PCBD2 1 3 chr5:134692657:+ chr5:134959040:+ INFRAME NA TCGA-HD-8224-01A-11R-2403-07 NSD2-PHTF2 7 49 chr4:1901251:+ chr7:77893608:+ INFRAME NA TCGA-HD-8224-01A-11R-2403-07 C15orf41-RYR3 1 4 chr15:36579961:+ chr15:33722715:+ FRAMESHIFT NA TCGA-HD-8314-01A-11R-2403-07 NIPAL3-GRHL3 31 64 chr1:24453504:+ chr1:24364185:+ FRAMESHIFT NA TCGA-HD-8314-01A-11R-2403-07 BPIFB2-MUC5B 1 3 chr20:33020587:+ chr11:1260626:+ FRAMESHIFT NA TCGA-HD-A634-01A-11R-A28V-07 GPD2-NR4A2 23 161 chr2:156476207:+ chr2:156326000:- FRAMESHIFT NA TCGA-HD-A634-01A-11R-A28V-07 NR4A2-GPD2 4 30 chr2:156330668:- chr2:156476098:+ . NA TCGA-HD-A6HZ-01A-12R-A31N-07 PLPP1-SPEF2 8 25 chr5:55534572:- chr5:35806707:+ FRAMESHIFT NA TCGA-HD-A6HZ-01A-12R-A31N-07 ACTR3-SLC4A10 5 15 chr2:113955706:+ chr2:161620915:+ . NA TCGA-HD-A6HZ-01A-12R-A31N-07 PTPRF-LRP12 4 10 chr1:43623403:+ chr8:104509074:- . NA TCGA-HD-A6HZ-01A-12R-A31N-07 GPR161-MPC2 1 5 chr1:168136257:- chr1:167920631:- FRAMESHIFT NA TCGA-HD-A6HZ-01A-12R-A31N-07 CACNA2D1-CDK14 1 2 chr7:81982567:- chr7:91045897:+ FRAMESHIFT NA TCGA-HD-A6I0-01A-11R-A31N-07 ARHGEF37-MIR205HG 1 1 chr5:149581624:+ chr1:209429181:+ . NA TCGA-IQ-7630-01A-11R-2081-07 PSAP-ASCC1 1 12 chr10:71851182:- chr10:72213331:- . NA TCGA-IQ-7632-01A-11R-2081-07 PWP2-TRAPPC10 3 5 chr21:44124727:+ chr21:44074324:+ INFRAME NA TCGA-IQ-A61G-01A-11R-A30B-07 ASNSD1-PMS1 6 32 chr2:189661610:+ chr2:189843964:+ INFRAME NA TCGA-IQ-A61G-01A-11R-A30B-07 EML3-INTS5 2 6 chr11:62605113:- chr11:62649999:- INFRAME NA TCGA-IQ-A61H-01A-11R-A30B-07 GRHL2-CRMP1 74 210 chr8:101492789:+ chr4:5828668:- FRAMESHIFT NA TCGA-IQ-A61H-01A-11R-A30B-07 GRHL2-SPAG1 1 17 chr8:101649499:+ chr8:100162279:+ . NA TCGA-IQ-A61H-01A-11R-A30B-07 FCHSD2-STARD10 3 5 chr11:73083695:- chr11:72793924:- . NA TCGA-IQ-A61H-01A-11R-A30B-07 ATP6V1C1-VPS13B 1 3 chr8:103042407:+ chr8:99556450:+ INFRAME NA TCGA-IQ-A61I-01A-11R-A30B-07 CXCL1-AFP 2 14 chr4:73869989:+ chr4:73453765:+ INFRAME NA TCGA-IQ-A61I-01A-11R-A30B-07 FANCC-ACOT11 1 8 chr9:95135346:- chr1:54584655:+ INFRAME Likely Oncogenic NA TCGA-KU-A66T-01A-11R-A30B-07 KDM5C-HUWE1 44 200 chrX:53216074:- chrX:53680186:- . Likely Oncogenic NA TCGA-KU-A66T-01A-11R-A30B-07 NSD3-TCEA1 22 223 chr8:38304587:- chr8:53970463:- FRAMESHIFT NA TCGA-KU-A66T-01A-11R-A30B-07 MYO1B-NCKAP1 5 17 chr2:191245626:+ chr2:182964808:- . NA TCGA-KU-A66T-01A-11R-A30B-07 CHM-KCNIP4 1 4 chrX:85873052:- chr4:20850667:- FRAMESHIFT NA TCGA-KU-A66T-01A-11R-A30B-07 FAM171B-ZNF75D 1 2 chr2:186694411:+ chrX:135252011:- . NA TCGA-KU-A6H7-01A-11R-A31N-07 CPSF6-COL16A1 70 296 chr12:69262562:+ chr1:31652853:- FRAMESHIFT NA TCGA-KU-A6H7-01A-11R-A31N-07 COL16A1-CPSF6 20 120 chr1:31653599:- chr12:69269512:+ FRAMESHIFT NA TCGA-KU-A6H7-01A-11R-A31N-07 HSPA8-VSTM5 1 28 chr11:123060593:- chr11:93821323:- FRAMESHIFT NA TCGA-MT-A51X-01A-11R-A266-07 UNC13B-UBE2R2 7 31 chr9:35231219:+ chr9:33886881:+ FRAMESHIFT NA TCGA-MT-A51X-01A-11R-A266-07 GTF2IRD1-SEM1 4 5 chr7:74454176:+ chr7:96637306:- . NA TCGA-MT-A67A-01A-11R-A30B-07 CCAR2-PPP3CC 2 2 chr8:22608065:+ chr8:22540615:+ FRAMESHIFT NA TCGA-MT-A67F-01A-11R-A30B-07 RBM17-PRKACB 9 48 chr10:6106238:+ chr1:84179177:+ INFRAME NA TCGA-MT-A7BN-01A-12R-A34R-07 NT5DC1-SEC63 5 20 chr6:116115770:+ chr6:107883146:- INFRAME NA TCGA-MT-A7BN-01A-12R-A34R-07 PREP-PTPRK 1 9 chr6:105281746:- chr6:128322310:- FRAMESHIFT NA TCGA-MT-A7BN-01A-12R-A34R-07 BPGM-AKR1B15 1 2 chr7:134646937:+ chr7:134568158:+ . NA TCGA-MT-A7BN-01A-12R-A34R-07 ZNF529-FAM187B 1 2 chr19:36572333:- chr19:35225212:- INFRAME NA TCGA-MZ-A5BI-01A-31R-A34R-07 ZFPM2-ANXA13 28 69 chr8:105634357:+ chr8:123681359:- FRAMESHIFT NA TCGA-MZ-A5BI-01A-31R-A34R-07 NFE2L3-TPST1 3 25 chr7:26183784:+ chr7:66352505:+ INFRAME NA TCGA-MZ-A5BI-01A-31R-A34R-07 UBR5-TRAF3 3 5 chr8:102257632:- chr14:102886189:+ INFRAME NA TCGA-MZ-A5BI-01A-31R-A34R-07 SUZ12-LRRC37B 1000 1000 chr17:31988497:+ chr17:32053266:+ FRAMESHIFT NA TCGA-MZ-A6I9-01A-11R-A31N-07 HSD17B12-RPS6KB1 1 2 chr11:43840064:+ chr17:59910562:+ INFRAME NA TCGA-MZ-A7D7-01A-21R-A34R-07 TOP1-CA10 12 11 chr20:41029455:+ chr17:51747818:- FRAMESHIFT Likely Oncogenic NA TCGA-MZ-A7D7-01A-21R-A34R-07 JARID2-HFE 1 11 chr6:15452175:+ chr6:26091314:+ INFRAME NA TCGA-MZ-A7D7-01A-21R-A34R-07 UVRAG-DPP3 1 3 chr11:75912039:+ chr11:66492716:+ FRAMESHIFT NA TCGA-P3-A5Q6-01A-11R-A28V-07 NELL2-MUC19 2 5 chr12:44607169:- chr12:40397879:+ . NA TCGA-P3-A5Q6-01A-11R-A28V-07 KMT2A-ATP5L 1 1 chr11:118436944:+ chr11:118431024:+ INFRAME Likely Oncogenic NA TCGA-P3-A5QA-01A-11R-A28V-07 MYH9-RBFOX2 30 48 chr22:36282713:- chr22:35746561:- INFRAME NA TCGA-P3-A5QA-01A-11R-A28V-07 FAM160A1-MYO18B 1 6 chr4:151482648:+ chr22:25868320:+ . NA TCGA-P3-A5QE-01A-11R-A28V-07 SPAG7-DNAH17 1 17 chr17:4967720:- chr17:78475833:- FRAMESHIFT NA TCGA-P3-A5QF-01A-11R-A28V-07 CPSF1-VPS28 8 20 chr8:144399588:- chr8:144423922:- INFRAME NA TCGA-P3-A6SW-01A-11R-A34R-07 ZBTB49-IGKJ5 13 0 chr4:4290353:+ chr2:88860603:- . NA TCGA-P3-A6SW-01A-11R-A34R-07 MIDN-HMGB2P1 3 4 chr19:1255694:+ chr19:1203272:+ . NA TCGA-P3-A6SX-01A-11R-A34R-07 RPS10-ITPR3 2 10 chr6:34424669:- chr6:33655766:+ INFRAME NA TCGA-P3-A6SX-01A-11R-A34R-07 SAMD9-VPS50 2 6 chr7:93114795:- chr7:93239866:+ . NA TCGA-P3-A6T0-01A-12R-A34R-07 UBE2L3-BID 1 11 chr22:21611043:+ chr22:17739488:- INFRAME NA TCGA-P3-A6T3-01A-11R-A34R-07 NRP2-PARD3B 2 7 chr2:205697721:+ chr2:205615456:+ INFRAME NA TCGA-P3-A6T5-01A-11R-A34R-07 PRSS23-LGALS12 7 26 chr11:86823593:+ chr11:63510463:+ FRAMESHIFT NA TCGA-P3-A6T5-01A-11R-A34R-07 APLP2-SLC22A10 4 2 chr11:130070082:+ chr11:63362380:+ . NA TCGA-P3-A6T7-01A-11R-A34R-07 CRYBG3-MYBPC1 4 4 chr3:97900485:+ chr12:101614496:+ FRAMESHIFT NA TCGA-P3-A6T7-01A-11R-A34R-07 P4HB-CENPX 1 4 chr17:81859181:- chr17:82019219:- INFRAME NA TCGA-P3-A6T7-01A-11R-A34R-07 RGMA-GLYATL1P3 1 2 chr15:93072916:- chr11:59093934:+ INFRAME NA TCGA-P3-A6T8-01A-11R-A34R-07 TMPRSS2-HSF2BP 22 47 chr21:41471806:- chr21:43529962:- INFRAME Likely Oncogenic NA TCGA-P3-A6T8-01A-11R-A34R-07 SLC35G2-IL20RB 8 43 chr3:136819214:+ chr3:136980466:+ . NA TCGA-P3-A6T8-01A-11R-A34R-07 EIF3A-TBC1D1 7 6 chr10:119049801:- chr4:38089932:+ FRAMESHIFT NA TCGA-P3-A6T8-01A-11R-A34R-07 AGO1-SLC25A3P1 3 8 chr1:35902337:+ chr1:53415524:- . NA TCGA-P3-A6T8-01A-11R-A34R-07 WNK1-KDM4B 1 7 chr12:754324:+ chr19:5016257:+ . NA TCGA-QK-A64Z-01A-11R-A30B-07 TRA2B-HRH4 6 27 chr3:185937825:- chr18:24468788:+ FRAMESHIFT NA TCGA-QK-A64Z-01A-11R-A30B-07 TMEM241-RIOK3 5 12 chr18:23384990:- chr18:23466133:+ INFRAME NA TCGA-QK-A64Z-01A-11R-A30B-07 YEATS2-HTR3C 5 8 chr3:183762279:+ chr3:184055312:+ INFRAME NA TCGA-QK-A652-01A-11R-A30B-07 LENG1-NIT2 8 25 chr19:54158282:- chr3:100341073:+ FRAMESHIFT NA TCGA-QK-A6IG-01A-11R-A31N-07 STK39-PARVA 2 5 chr2:168247228:- chr11:12473745:+ INFRAME NA TCGA-QK-A6IG-01A-11R-A31N-07 PRR12-SNRNP70 1 3 chr19:49601918:+ chr19:49101390:+ INFRAME NA TCGA-QK-A6IH-01A-11R-A31N-07 DENND5B-TSPAN9 1 1 chr12:31495810:- chr12:3083653:+ . NA TCGA-QK-A6IJ-01A-11R-A31N-07 RALY-PXMP4 9 21 chr20:33994131:+ chr20:33714736:- . NA TCGA-QK-A6V9-01A-11R-A34R-07 PLSCR1-MACROD2 7 18 chr3:146517006:- chr20:16041201:+ FRAMESHIFT NA TCGA-QK-A6VB-01A-12R-A34R-07 DDB1-STX3 25 79 chr11:61323979:- chr11:59773211:+ INFRAME NA TCGA-QK-A6VC-01A-23R-A34R-07 PBRM1-GLT8D1 10 16 chr3:52678500:- chr3:52700496:- . Likely Oncogenic NA TCGA-QK-A6VC-01A-23R-A34R-07 NFE2L1-COPZ2 1 7 chr17:48056598:+ chr17:48033944:- INFRAME NA TCGA-QK-A8Z7-01A-11R-A39I-07 JUP-NT5C3B 5 82 chr17:41758715:- chr17:41825657:- INFRAME NA TCGA-QK-A8Z7-01A-11R-A39I-07 NMRAL2P-FBXL6 4 17 chr3:185968717:+ chr8:144357121:- . NA TCGA-QK-A8Z7-01A-11R-A39I-07 FOXA3-RGS6 4 5 chr19:45864525:+ chr14:72454528:+ FRAMESHIFT NA TCGA-QK-A8Z8-01A-11R-A39I-07 TMEM165-KIAA1211 19 45 chr4:55424643:+ chr4:56272321:+ . NA TCGA-QK-A8Z8-01A-11R-A39I-07 RAB28-STAP1 1 9 chr4:13460699:- chr4:67590884:+ FRAMESHIFT NA TCGA-QK-A8Z9-01B-11R-A39I-07 SP140L-PDE6D 10 33 chr2:230392229:+ chr2:231739202:- . NA TCGA-QK-A8Z9-01B-11R-A39I-07 AMOTL1-CEP295 6 27 chr11:94729055:+ chr11:93721312:+ INFRAME NA TCGA-QK-A8Z9-01B-11R-A39I-07 HADHA-PRKAR1B 2 1 chr2:26230192:- chr7:596304:- FRAMESHIFT NA TCGA-QK-A8Z9-01B-11R-A39I-07 TENM3-NR3C2 1 2 chr4:182449083:+ chr4:148194862:- INFRAME NA TCGA-QK-A8ZA-01A-11R-A39I-07 ESYT2-ZNF595 9 23 chr7:158797942:- chr4:59430:+ INFRAME NA TCGA-QK-A8ZA-01A-11R-A39I-07 ATP11A-NAXD 8 18 chr13:112690455:+ chr13:110622216:+ FRAMESHIFT NA TCGA-QK-A8ZA-01A-11R-A39I-07 PRRC2B-UHRF2 4 12 chr9:131394263:+ chr9:6504593:+ . NA TCGA-QK-A8ZA-01A-11R-A39I-07 BTBD9-PLEKHB1 1 9 chr6:38577600:- chr11:73660753:+ INFRAME NA TCGA-QK-A8ZA-01A-11R-A39I-07 ZCCHC14-C16orf95 1 5 chr16:87460008:- chr16:87141103:- . NA TCGA-QK-A8ZB-01A-11R-A39I-07 HEBP1-NCK1 35 189 chr12:12987152:- chr3:136948259:+ FRAMESHIFT NA TCGA-QK-A8ZB-01A-11R-A39I-07 NCK1-HEBP1 44 96 chr3:136946295:+ chr12:12975479:- FRAMESHIFT NA TCGA-QK-A8ZB-01A-11R-A39I-07 IL20RB-HEBP1 44 54 chr3:136946295:+ chr12:12975479:- . NA TCGA-QK-A8ZB-01A-11R-A39I-07 PDIA6-DKK3 23 48 chr2:10812678:- chr11:11968487:- FRAMESHIFT NA TCGA-QK-A8ZB-01A-11R-A39I-07 BRWD3-FAM155A 6 39 chrX:80791854:- chr13:107170786:- INFRAME NA TCGA-QK-A8ZB-01A-11R-A39I-07 MAP4K3-EML4 2 4 chr2:39378066:- chr2:42280850:+ INFRAME NA TCGA-QK-A8ZB-01A-11R-A39I-07 LPIN1-TIMM17A 1 4 chr2:11820514:+ chr1:201957511:+ FRAMESHIFT NA TCGA-RS-A6TO-01A-32R-A34R-07 NEAT1-CNIH2 85 152 chr11:65424014:+ chr11:66283035:+ . NA TCGA-RS-A6TO-01A-32R-A34R-07 NEAT1_3-CNIH2 85 98 chr11:65424014:+ chr11:66283035:+ . NA TCGA-RS-A6TO-01A-32R-A34R-07 IPPK-IARS 2 19 chr9:92669908:- chr9:92256800:- INFRAME NA TCGA-RS-A6TO-01A-32R-A34R-07 LRFN3-GMFG 2 2 chr19:35935782:+ chr19:39333126:- . NA TCGA-RS-A6TO-01A-32R-A34R-07 GLS-MYO1B 1 5 chr2:190902026:+ chr2:191276887:+ . NA TCGA-RS-A6TO-01A-32R-A34R-07 MYO9B-SPC24 1 2 chr19:17102557:+ chr19:11146430:- INFRAME NA TCGA-RS-A6TP-01A-12R-A34R-07 RCBTB2-EPSTI1 17 58 chr13:48510629:- chr13:42926429:- INFRAME NA TCGA-RS-A6TP-01A-12R-A34R-07 MAP2K4-PSMD12 8 15 chr17:12021001:+ chr17:67357578:- INFRAME Likely Oncogenic NA TCGA-RS-A6TP-01A-12R-A34R-07 TRPC4AP-SOGA1 6 15 chr20:35078046:- chr20:36804902:- INFRAME NA TCGA-RS-A6TP-01A-12R-A34R-07 KIF3B-PXMP4 3 2 chr20:32316874:+ chr20:33714736:- INFRAME NA TCGA-RS-A6TP-01A-12R-A34R-07 NINL-TTLL9 1 8 chr20:25489244:- chr20:31937396:+ INFRAME NA TCGA-T2-A6WZ-01A-21R-A34R-07 USP9X-BLVRB 21 106 chrX:41219231:+ chr19:40458545:- INFRAME NA TCGA-T2-A6WZ-01A-21R-A34R-07 MACROD1-BAD 5 15 chr11:64151239:- chr11:64284376:- . NA TCGA-T2-A6X0-01A-11R-A34R-07 CCDC88C-RASGEF1B 19 97 chr14:91305765:- chr4:81915358:- INFRAME NA TCGA-T2-A6X0-01A-11R-A34R-07 BCL2L13-CUX2 6 17 chr22:17655832:+ chr12:111334441:+ INFRAME NA TCGA-T2-A6X0-01A-11R-A34R-07 DAPP1-COL4A3 4 7 chr4:99863072:+ chr2:227311786:+ FRAMESHIFT NA TCGA-T2-A6X0-01A-11R-A34R-07 COPS8-RIN3 4 1 chr2:237099038:+ chr14:92684987:+ . NA TCGA-T2-A6X0-01A-11R-A34R-07 UFSP2-EPHA4 3 5 chr4:185425866:- chr2:221501172:- FRAMESHIFT NA TCGA-T2-A6X0-01A-11R-A34R-07 PEX14-CASZ1 1000 1000 chr1:10623116:+ chr1:10796650:- . NA TCGA-T3-A92M-01A-31R-A39I-07 ZMAT5-NIPSNAP1 5 11 chr22:29766872:- chr22:29561862:- . NA TCGA-T3-A92M-01A-31R-A39I-07 FHOD3-MOCOS 4 8 chr18:36298000:+ chr18:36256968:+ FRAMESHIFT NA TCGA-T3-A92M-01A-31R-A39I-07 OSBPL1A-MYO16 3 12 chr18:24239220:- chr13:109120370:+ FRAMESHIFT NA TCGA-T3-A92M-01A-31R-A39I-07 CCDC142-M1AP 2 5 chr2:74481223:- chr2:74581847:- INFRAME NA TCGA-T3-A92M-01A-31R-A39I-07 NCS1-TOR1B 2 4 chr9:130223159:+ chr9:129804073:+ FRAMESHIFT NA TCGA-T3-A92N-01A-11R-A39I-07 BCL2L13-VPS8 4 11 chr22:17696210:+ chr3:184898565:+ INFRAME NA TCGA-TN-A7HJ-01A-12R-A34R-07 B4GALT1-HSPC324 7 16 chr9:33120419:- chr9:136649065:- . NA TCGA-TN-A7HJ-01A-12R-A34R-07 GNRHR2-S100A13 4 11 chr1:145919900:+ chr1:153619038:- . NA TCGA-TN-A7HJ-01A-12R-A34R-07 DNAAF5-SMYD3 2 1 chr7:770618:+ chr1:245929937:- FRAMESHIFT NA TCGA-TN-A7HJ-01A-12R-A34R-07 SENP5-KCNMB3 1 5 chr3:196930900:+ chr3:179244693:- FRAMESHIFT NA TCGA-UF-A719-01A-12R-A34R-07 TULP4-FNDC1 8 29 chr6:158498812:+ chr6:159214945:+ INFRAME NA TCGA-UF-A71A-01A-22R-A34R-07 RABEP1-RNF167 6 28 chr17:5332152:+ chr17:4940487:+ . NA TCGA-UF-A71A-01A-22R-A34R-07 TTK-BCKDHB 8 16 chr6:80014586:+ chr6:80200934:+ INFRAME NA TCGA-UF-A71B-01A-12R-A34R-07 TMEM241-PACS1 1 5 chr18:23309680:- chr11:66193486:+ INFRAME NA TCGA-UF-A71E-01A-31R-A34R-07 EPC1-QPCT 8 10 chr10:32305772:- chr2:37359580:+ FRAMESHIFT NA TCGA-UF-A7J9-01A-12R-A34R-07 RASSF8-ARNTL2 5 10 chr12:26068923:+ chr12:27400534:+ . NA TCGA-UF-A7J9-01A-12R-A34R-07 ERC1-HEBP1 1 17 chr12:1408247:+ chr12:12989415:- INFRAME NA TCGA-UF-A7JA-01A-12R-A34R-07 STAG1-SPSB4 4 7 chr3:136398749:- chr3:141147142:+ FRAMESHIFT NA TCGA-UF-A7JA-01A-12R-A34R-07 TRAPPC11-ING2 3 3 chr4:183679486:+ chr4:183510282:+ FRAMESHIFT NA TCGA-UF-A7JA-01A-12R-A34R-07 PRKCD-SLC4A8 2 5 chr3:53190001:+ chr12:51489700:+ INFRAME NA TCGA-UF-A7JD-01A-11R-A34R-07 SNHG6-PPP1R42 13 39 chr8:66925437:- chr8:67010831:- . NA TCGA-UF-A7JD-01A-11R-A34R-07 POGZ-SLC6A13 4 13 chr1:151423397:- chr12:243813:- INFRAME NA TCGA-UF-A7JD-01A-11R-A34R-07 SLFN5-CDK5RAP3 3 15 chr17:35243143:+ chr17:47973519:+ . NA TCGA-UF-A7JD-01A-11R-A34R-07 SMIM15-ELOVL7 2 11 chr5:61161088:- chr5:60799230:- . NA TCGA-UF-A7JH-01A-21R-A34R-07 LEMD3-TSPAN8 1 11 chr12:65171118:+ chr12:71282819:- . NA TCGA-UF-A7JJ-01A-11R-A34R-07 AEBP2-PIK3C2G 6 2 chr12:19473355:+ chr12:18609535:+ FRAMESHIFT NA TCGA-UF-A7JJ-01A-11R-A34R-07 PARP4-COL9A1 1 15 chr13:24512706:- chr6:70283820:- . NA TCGA-UF-A7JK-01A-11R-A34R-07 POMK-ANK1 9 26 chr8:43103830:+ chr8:41734069:- INFRAME NA TCGA-UF-A7JK-01A-11R-A34R-07 MAP4-ULK2 1 11 chr3:47914817:- chr17:19777716:- FRAMESHIFT NA TCGA-UF-A7JV-01A-11R-A34R-07 YAP1-SHANK2 3 4 chr11:102162571:+ chr11:70502931:- FRAMESHIFT Likely Oncogenic NA TCGA-UF-A7JV-01A-11R-A34R-07 PACS1-FOLH1 2 7 chr11:66193573:+ chr11:49158043:- INFRAME NA TCGA-UF-A7JV-01A-11R-A34R-07 UVRAG-RRAS2 3 1 chr11:75815524:+ chr11:14295855:- INFRAME NA TCGA-UF-A7JV-01A-11R-A34R-07 CTSC-MMP12 1 7 chr11:88334937:- chr11:102873112:- INFRAME NA TCGA-UF-A7JV-01A-11R-A34R-07 LAMTOR1-UVRAG 1 4 chr11:72098289:- chr11:75851883:+ INFRAME NA TCGA-UP-A6WW-01A-12R-A34R-07 CYLD-UNGP1 13 17 chr16:50782466:+ chr16:51278781:+ . NA TCGA-UP-A6WW-01A-12R-A34R-07 TSPAN5-MAPK10 3 20 chr4:98658146:- chr4:86017375:- INFRAME NA TCGA-UP-A6WW-01A-12R-A34R-07 C9orf3-CUEDC1 1 5 chr9:94956015:+ chr17:57885879:- . NA TCGA-KL-8328-01A-11R-2315-07 C20orf194-ADRA1D 2 8 chr20:3407475:- chr20:4222130:- FRAMESHIFT NA TCGA-KL-8329-01A-11R-2315-07 NEDD4L-APCDD1 1 3 chr18:58252054:+ chr18:10468469:+ FRAMESHIFT NA TCGA-KL-8335-01A-11R-2315-07 HSD17B12-WT1 6 5 chr11:43680987:+ chr11:32428619:- INFRAME NA TCGA-KL-8339-01A-11R-2315-07 CHD8-CBLN3 38 154 chr14:21392551:- chr14:24430922:- . NA TCGA-KL-8339-01A-11R-2315-07 SOX6-BTBD10 7 48 chr11:16318446:- chr11:13405856:- INFRAME NA TCGA-KL-8339-01A-11R-2315-07 MMP14-RBM23 7 30 chr14:22836925:+ chr14:22902382:- INFRAME NA TCGA-KL-8339-01A-11R-2315-07 RBM47-NRL 2 33 chr4:40515867:- chr14:24084745:- . NA TCGA-KL-8339-01A-11R-2315-07 HECTD1-DHRS4L2 5 16 chr14:31144807:- chr14:23990182:+ FRAMESHIFT NA TCGA-KL-8339-01A-11R-2315-07 STARD10-ZC3H12C 6 5 chr11:72780975:- chr11:110136663:+ INFRAME NA TCGA-KL-8339-01A-11R-2315-07 GAS2-SOX6 1 7 chr11:22675014:+ chr11:16341252:- FRAMESHIFT NA TCGA-KL-8341-01A-11R-2315-07 BAALC-EIF3E 34 43 chr8:103141057:+ chr8:108203503:- FRAMESHIFT NA TCGA-KL-8341-01A-11R-2315-07 WDR72-AZIN1 7 29 chr15:53665572:- chr8:102887147:- . NA TCGA-KL-8341-01A-11R-2315-07 CMC1-WDR72 5 13 chr3:28263380:+ chr15:53523322:- INFRAME NA TCGA-KL-8341-01A-11R-2315-07 LRP12-CCL28 4 12 chr8:104531907:- chr5:43388476:- INFRAME NA TCGA-KL-8341-01A-11R-2315-07 COPS7A-ZDHHC11B 5 5 chr12:6729449:+ chr5:716865:- INFRAME NA TCGA-KL-8341-01A-11R-2315-07 VPS13C-RB1CC1 1 8 chr15:62000564:- chr8:52686967:- FRAMESHIFT NA TCGA-KL-8341-01A-11R-2315-07 THSD4-ZNF710 1 6 chr15:71256715:+ chr15:90067110:+ . NA TCGA-KL-8341-01A-11R-2315-07 STXBP5L-EPHA3 1 5 chr3:121381532:+ chr3:89395837:+ INFRAME NA TCGA-KL-8341-01A-11R-2315-07 SMAD3-ATP8B4 1 3 chr15:67066360:+ chr15:50107008:- . Likely Oncogenic NA TCGA-KL-8341-01A-11R-2315-07 SORD-RAB27A 1 3 chr15:45023349:+ chr15:55205705:- FRAMESHIFT NA TCGA-KM-8443-01A-11R-2315-07 LNPEP-GPBP1 19 44 chr5:96936174:+ chr5:57249454:+ FRAMESHIFT NA TCGA-KM-8443-01A-11R-2315-07 VPS36-LPAR6 3 15 chr13:52439098:- chr13:48389812:- . NA TCGA-KN-8425-01A-11R-2315-07 TRAF3-ZNF839 1 2 chr14:102777675:+ chr14:102334554:+ . NA TCGA-KN-8427-01A-11R-2315-07 EIF3B-AMZ1 1 6 chr7:2377075:+ chr7:2700234:+ . NA TCGA-KN-8428-01A-11R-2315-07 LAMA2-C6orf58 11 57 chr6:128883357:+ chr6:127578686:+ INFRAME NA TCGA-KN-8435-01A-11R-2315-07 PLEKHG4B-ADCY2 6 20 chr5:113448:+ chr5:7520738:+ INFRAME NA TCGA-KN-8435-01A-11R-2315-07 PDCD6-TERT 1 3 chr5:271821:+ chr5:1282624:- FRAMESHIFT NA TCGA-KO-8404-01A-11R-2315-07 ARNT-MRPL52 2 1 chr1:150846263:- chr14:22834172:+ INFRAME NA TCGA-6D-AA2E-01A-11R-A37O-07 TFE3-MED15 9 53 chrX:49038010:- chr22:20582611:+ INFRAME NA TCGA-6D-AA2E-01A-11R-A37O-07 MED15-TFE3 3 66 chr22:20575232:+ chrX:49034251:- INFRAME NA TCGA-A3-3311-01A-02R-1325-07 NFKBIE-SLC29A1 13 106 chr6:44260043:- chr6:44227260:+ . NA TCGA-A3-3313-01A-02R-1325-07 XPO5-MRPS10 180 486 chr6:43547608:- chr6:42211917:- INFRAME NA TCGA-A3-3313-01A-02R-1325-07 C6orf106-LRRC1 18 114 chr6:34646601:- chr6:53920625:+ INFRAME NA TCGA-A3-3313-01A-02R-1325-07 PTCHD4-CD2AP 19 64 chr6:48008634:- chr6:47503280:+ INFRAME NA TCGA-A3-3313-01A-02R-1325-07 PKHD1-RCAN2 11 90 chr6:51830861:- chr6:46248896:- FRAMESHIFT NA TCGA-A3-3313-01A-02R-1325-07 CYP39A1-LEMD2 14 48 chr6:46652406:- chr6:33781153:- FRAMESHIFT NA TCGA-A3-3313-01A-02R-1325-07 HIST1H2AK-SCGN 3 49 chr6:27837954:- chr6:25689173:+ FRAMESHIFT NA TCGA-A3-3313-01A-02R-1325-07 CMTR1-GPX6 5 11 chr6:37435762:+ chr6:28510904:- FRAMESHIFT NA TCGA-A3-3313-01A-02R-1325-07 BTN2A1-HIST1H2BC 4 7 chr6:26463525:+ chr6:26115135:- . NA TCGA-A3-3313-01A-02R-1325-07 MRPS18A-KIF6 2 10 chr6:43681089:- chr6:39385672:- FRAMESHIFT NA TCGA-A3-3313-01A-02R-1325-07 ZSCAN9-MRPS18A 1 13 chr6:28227837:+ chr6:43675617:- FRAMESHIFT NA TCGA-A3-3313-01A-02R-1325-07 TRERF1-OR2H1 1 10 chr6:42451177:- chr6:29458454:+ . NA TCGA-A3-3313-01A-02R-1325-07 KCTD20-C6orf106 1 9 chr6:36443111:+ chr6:34654779:- . NA TCGA-A3-3319-01A-02R-1325-07 EHD1-DGCR6 17 41 chr11:64853214:- chr22:18913012:+ . NA TCGA-A3-3322-01A-02R-1325-07 HAVCR1-TIMD4 1 1 chr5:157037247:- chr5:156926312:- INFRAME NA TCGA-A3-3326-01A-01R-0864-07 AHSA2-KIAA1841 5 6 chr2:61186497:+ chr2:61134137:+ FRAMESHIFT NA TCGA-A3-3362-01A-02R-1325-07 NPEPPS-YWHAEP7 9 11 chr17:47531555:+ chr17:37884015:- . NA TCGA-A3-3363-01A-01R-0864-07 WDR60-VIPR2 11 25 chr7:158901816:+ chr7:159058578:- INFRAME NA TCGA-A3-3363-01A-01R-0864-07 AGAP3-MKLN1 4 3 chr7:151087072:+ chr7:131387120:+ FRAMESHIFT NA TCGA-A3-3373-01A-02R-1420-07 HES4-AFF1 4 46 chr1:999692:- chr4:87084120:+ INFRAME NA TCGA-A3-A8OW-01A-11R-A37O-07 EDNRB-COL4A1 1 1 chr13:77918091:- chr13:110242734:- INFRAME NA TCGA-AK-3426-01A-02R-1325-07 MYO15B-SAP30BP 1000 1000 chr17:75596899:+ chr17:75668516:+ INFRAME NA TCGA-AK-3455-01A-01R-0864-07 PBRM1-NT5DC2 1 6 chr3:52668498:- chr3:52525295:- INFRAME Likely Oncogenic NA TCGA-AK-3456-01A-02R-1325-07 TFE3-SFPQ 68 197 chrX:49043111:- chr1:35188090:- INFRAME NA TCGA-AK-3456-01A-02R-1325-07 SFPQ-TFE3 75 160 chr1:35189003:- chrX:49040568:- INFRAME NA TCGA-AS-3777-01A-01R-0864-07 ARHGAP19-CYB5A 35 49 chr10:97292572:- chr18:74263477:- INFRAME NA TCGA-AS-3777-01A-01R-0864-07 CPT1A-ANPEP 20 16 chr11:68841775:- chr15:89785501:- . NA TCGA-AS-3777-01A-01R-0864-07 MKL1-SPIDR 17 12 chr22:40636478:- chr8:47673801:+ . NA TCGA-AS-3777-01A-01R-0864-07 COQ10A-NABP2 11 16 chr12:56269561:+ chr12:56223584:+ . NA TCGA-AS-3777-01A-01R-0864-07 CPM-GOLT1B 7 23 chr12:68932678:- chr12:21506885:+ INFRAME NA TCGA-AS-3777-01A-01R-0864-07 CALD1-CGN 4 12 chr7:134891673:+ chr1:151518506:+ . NA TCGA-AS-3777-01A-01R-0864-07 SLCO2B1-HNF4A 3 13 chr11:75159872:+ chr20:44406058:+ . NA TCGA-AS-3777-01A-01R-0864-07 ATP8B1-SLC50A1 4 3 chr18:57695171:- chr1:155136299:+ FRAMESHIFT NA TCGA-AS-3777-01A-01R-0864-07 ABHD6-FLNB 1 8 chr3:58256705:+ chr3:58118872:+ FRAMESHIFT NA TCGA-AS-3777-01A-01R-0864-07 GAS2L1-EWSR1 1 3 chr22:29310998:+ chr22:29298733:+ FRAMESHIFT Likely Oncogenic NA TCGA-AS-3777-01A-01R-0864-07 SLC25A30-CCDC107 1 3 chr13:45408927:- chr9:35658576:+ FRAMESHIFT NA TCGA-B0-4698-01A-01R-1503-07 CASC4-CTDSPL2 5 1 chr15:44338317:+ chr15:44496380:+ INFRAME NA TCGA-B0-4698-01A-01R-1503-07 PTPRU-NOS1AP 3 3 chr1:29292026:+ chr1:162154405:+ FRAMESHIFT NA TCGA-B0-4698-01A-01R-1503-07 HMGA2-CHMP1A 1 2 chr12:65828087:+ chr16:89647331:- INFRAME NA TCGA-B0-4700-01A-02R-1541-07 VHL-TATDN2 1 1 chr3:10142187:+ chr3:10270131:+ FRAMESHIFT Likely Oncogenic NA TCGA-B0-4706-01A-01R-1503-07 MBD5-ACOD1 2 10 chr2:148342336:+ chr13:76952489:+ . NA TCGA-B0-4810-01A-01R-1503-07 TIMMDC1-RFESD 4 36 chr3:119504021:+ chr5:95656952:+ . NA TCGA-B0-4810-01A-01R-1503-07 HNRNPK-PFKP 2 1 chr9:83980153:- chr10:3129819:+ . NA TCGA-B0-4811-01A-01R-1503-07 EPB41L1-PHF20 1 2 chr20:36125527:+ chr20:35842573:+ FRAMESHIFT NA TCGA-B0-4816-01A-01R-1503-07 GTF2E2-ROBO2 2 1 chr8:30657973:- chr3:77098014:+ . NA TCGA-B0-4816-01A-01R-1503-07 ITGA6-PDK1 1000 1000 chr2:172504251:+ chr2:172556000:+ . NA TCGA-B0-4821-01A-01R-1503-07 HAUS6-PLIN2 4 6 chr9:19070219:- chr9:19131271:- . NA TCGA-B0-4842-01A-02R-1420-07 CLPTM1L-SLC6A18 1 7 chr5:1334289:- chr5:1232219:+ FRAMESHIFT NA TCGA-B0-4842-01A-02R-1420-07 GNPDA2-TIAM2 2 1 chr4:44717113:- chr6:154907730:+ . NA TCGA-B0-4945-01A-01R-1420-07 ELL-CISD3 17 134 chr19:18465412:- chr17:38730760:+ FRAMESHIFT NA TCGA-B0-4945-01A-01R-1420-07 CTIF-GRM4 2 11 chr18:48670744:+ chr6:34092099:- INFRAME NA TCGA-B0-4945-01A-01R-1420-07 DNAH11-VDAC3 1 15 chr7:21545149:+ chr8:42393845:+ . NA TCGA-B0-4945-01A-01R-1420-07 SLC35D1-PRKAR2B 1 5 chr1:67049782:- chr7:107121952:+ FRAMESHIFT NA TCGA-B0-5075-01A-01R-1334-07 SLC9A3R1-RAB37 2 5 chr17:74766976:+ chr17:74729256:+ INFRAME NA TCGA-B0-5081-01A-01R-1334-07 ZNF277-CEACAM19 11 47 chr7:112206807:+ chr19:44672596:+ INFRAME NA TCGA-B0-5084-01A-01R-1334-07 ELOF1-RDH8 101 21 chr19:11559191:- chr19:10017057:+ . NA TCGA-B0-5088-01A-01R-1334-07 MLLT6-AATF 2 18 chr17:38705741:+ chr17:36988519:+ FRAMESHIFT NA TCGA-B0-5095-01A-01R-1420-07 GORASP2-WIPF1 2 38 chr2:170929403:+ chr2:174585611:- . NA TCGA-B0-5100-01A-01R-1420-07 NECTIN2-GAMT 2 1 chr19:44874478:+ chr19:1397499:- FRAMESHIFT NA TCGA-B0-5107-01A-01R-1420-07 ARHGAP35-NPAS1 1 1 chr19:46922356:+ chr19:47032278:+ FRAMESHIFT NA TCGA-B0-5116-01A-02R-1420-07 CD72-DDX58 1 3 chr9:35646403:- chr9:32459514:- . NA TCGA-B0-5117-01A-01R-1420-07 CRYL1-SPACA7 3 9 chr13:20489370:- chr13:112434485:+ FRAMESHIFT NA TCGA-B0-5119-01A-02R-1420-07 NOL9-TRNAU1AP 18 56 chr1:6541830:- chr1:28577500:+ INFRAME NA TCGA-B0-5692-01A-11R-1541-07 TNRC6B-EP300 3 18 chr22:40156182:+ chr22:41176247:+ FRAMESHIFT Likely Oncogenic NA TCGA-B0-5692-01A-11R-1541-07 FBXO7-PDPK1 1 3 chr22:32487828:+ chr16:2595793:+ FRAMESHIFT NA TCGA-B0-5698-01A-11R-1672-07 PLEC-KANSL1 3 6 chr8:143973403:- chr17:46067667:- FRAMESHIFT NA TCGA-B0-5701-01A-11R-1541-07 PPFIA1-FADD 2 4 chr11:70272436:+ chr11:70206133:+ FRAMESHIFT NA TCGA-B0-5701-01A-11R-1541-07 LRP2-FASTKD1 1 2 chr2:169307281:- chr2:169531490:- INFRAME NA TCGA-B0-5705-01A-11R-1541-07 SFPQ-TFE3 1 5 chr1:35187001:- chrX:49034251:- INFRAME NA TCGA-B0-5713-01A-11R-1672-07 KDM2A-PACS1 1 13 chr11:67121358:+ chr11:66242912:+ FRAMESHIFT NA TCGA-B0-5713-01A-11R-1672-07 LRIG1-SLC26A7 2 9 chr3:66394040:- chr8:91249539:+ . NA TCGA-B2-4098-01A-02R-1325-07 IL34-ARG2 2 8 chr16:70580049:+ chr14:67620894:+ . NA TCGA-B2-4101-01A-02R-1277-07 FAM172A-FHIT 21 47 chr5:93958777:- chr3:59752321:- INFRAME NA TCGA-B2-5641-01A-01R-1541-07 MIR100HG-GRAMD1B 6 14 chr11:122367496:- chr11:123577367:+ . NA TCGA-B4-5377-01A-01R-1503-07 TNFAIP8L1-SPEF2 2 6 chr19:4639629:+ chr5:35691037:+ . NA TCGA-B4-5838-01A-11R-1672-07 SPARC-ATOX1 11 14 chr5:151686865:- chr5:151746449:- . NA TCGA-B8-4143-01A-01R-1188-07 SLC25A26-FAM19A1 1 8 chr3:66346408:+ chr3:68538756:+ FRAMESHIFT NA TCGA-B8-4143-01A-01R-1188-07 PSMD1-ARMC9 2 2 chr2:231087181:+ chr2:231235224:+ FRAMESHIFT NA TCGA-B8-4143-01A-01R-1188-07 SLC36A1-TTC37 1 6 chr5:151479489:+ chr5:95467989:- FRAMESHIFT NA TCGA-B8-5158-01A-01R-1420-07 NRG3-SCD 3 6 chr10:82358868:+ chr10:100354427:+ FRAMESHIFT NA TCGA-B8-5163-01A-01R-1420-07 PIK3CB-KCNAB1 2 32 chr3:138694786:- chr3:156457453:+ FRAMESHIFT Likely Oncogenic NA TCGA-B8-5164-01A-01R-1420-07 MTF1-SERINC2 8 20 chr1:37857251:- chr1:31432967:+ FRAMESHIFT NA TCGA-B8-5546-01A-01R-1541-07 SFPQ-TFE3 69 302 chr1:35187001:- chrX:49034251:- INFRAME NA TCGA-B8-5553-01A-01R-1541-07 PCM1-NRG1 4 15 chr8:17924780:+ chr8:32754372:+ . NA TCGA-B8-A54H-01A-11R-A33J-07 SLCO4C1-ARHGEF38 2 20 chr5:102240718:- chr4:105700188:+ . NA TCGA-B8-A54J-01A-11R-A33J-07 TRAF3-MARK3 1 5 chr14:102830472:+ chr14:103428387:+ . NA TCGA-B8-A7U6-01A-12R-A37O-07 PDZRN3-ADAM19 2 5 chr3:73602354:- chr5:157570980:- FRAMESHIFT NA TCGA-BP-4770-01A-01R-1503-07 TET2-OSTC 1 4 chr4:105190505:+ chr4:108667247:+ . Likely Oncogenic NA TCGA-BP-4782-01A-02R-1420-07 ASB1-CLVS1 2 8 chr2:238444727:+ chr8:61292318:+ . NA TCGA-BP-4801-01A-02R-1420-07 ACSM2A-ABCC6 3 32 chr16:20480921:+ chr16:16169853:- INFRAME NA TCGA-BP-4801-01A-02R-1420-07 RTTN-CD226 1 5 chr18:70047971:- chr18:69947433:- . NA TCGA-BP-4961-01A-01R-1334-07 MAP1B-C3orf67 2 11 chr5:72115799:+ chr3:58753863:- INFRAME NA TCGA-BP-4962-01A-01R-1334-07 KLF6-ARMC4 2 7 chr10:3780106:- chr10:27907777:- INFRAME NA TCGA-BP-4965-01A-01R-1334-07 TNIP1-TCOF1 9 36 chr5:151060318:- chr5:150383062:+ INFRAME NA TCGA-BP-4965-01A-01R-1334-07 TNIP1-ARSI 7 16 chr5:151060318:- chr5:150298612:- FRAMESHIFT NA TCGA-BP-4965-01A-01R-1334-07 TNIP1-CAMK2A 3 10 chr5:151060318:- chr5:150289723:- . NA TCGA-BP-4968-01A-01R-1334-07 MCC-PSMD6 56 97 chr5:113294329:- chr3:64010955:- FRAMESHIFT NA TCGA-BP-4972-01A-01R-1334-07 LARP1-FTL 3 1 chr5:154815348:+ chr19:48965563:+ . NA TCGA-BP-4973-01A-01R-1334-07 EGLN3-TERT 5 8 chr14:34018601:- chr5:1282624:- . NA TCGA-BP-4977-01A-01R-1334-07 TRIP12-SLC16A14 17 27 chr2:229858772:- chr2:230037531:- INFRAME NA TCGA-BP-4981-01A-01R-1334-07 CECR2-EIF4ENIF1 1 5 chr22:17369909:+ chr22:31488745:- . NA TCGA-BP-4983-01A-01R-1334-07 GLIS3-RCL1 62 294 chr9:4286038:- chr9:4823548:+ INFRAME NA TCGA-BP-4983-01A-01R-1334-07 KANK1-CARM1P1 43 167 chr9:713464:+ chr9:2948282:- . NA TCGA-BP-4983-01A-01R-1334-07 DLG4-MARCH10 25 116 chr17:7217118:- chr17:62801752:- . NA TCGA-BP-4983-01A-01R-1334-07 KANK1-TPD52L3 23 70 chr9:540667:+ chr9:6330182:+ . NA TCGA-BP-4983-01A-01R-1334-07 DOCK8-JAK2 16 73 chr9:340321:+ chr9:5050686:+ FRAMESHIFT Likely Oncogenic NA TCGA-BP-4983-01A-01R-1334-07 MGAT5B-VMP1 14 58 chr17:76882298:+ chr17:59764971:+ INFRAME NA TCGA-BP-4983-01A-01R-1334-07 UBE2Z-TRIM37 12 48 chr17:48916187:+ chr17:59012446:- FRAMESHIFT NA TCGA-BP-4983-01A-01R-1334-07 ENDOV-TMEM104 12 14 chr17:80423632:+ chr17:74835927:+ INFRAME NA TCGA-BP-4983-01A-01R-1334-07 PITPNM3-STX8 8 30 chr17:6503527:- chr17:9378653:- INFRAME NA TCGA-BP-4983-01A-01R-1334-07 AK3-DOCK8 1 56 chr9:4740937:- chr9:382513:+ INFRAME NA TCGA-BP-4983-01A-01R-1334-07 IL33-CBWD1 8 3 chr9:6256082:+ chr9:173620:- . NA TCGA-BP-4983-01A-01R-1334-07 UHRF2-CBWD1 1 19 chr9:6421142:+ chr9:121573:- FRAMESHIFT NA TCGA-BP-4983-01A-01R-1334-07 SKAP1-DNAH17 4 4 chr17:48345905:- chr17:78485033:- INFRAME NA TCGA-BP-4983-01A-01R-1334-07 KAT7-NPLOC4 2 11 chr17:49818011:+ chr17:81622278:- INFRAME NA TCGA-BP-4983-01A-01R-1334-07 SPATA6L-GLIS3 2 9 chr9:4661899:- chr9:3937189:- INFRAME NA TCGA-BP-4983-01A-01R-1334-07 TEPSIN-RHBDF2 1 5 chr17:81238514:- chr17:76487909:- . NA TCGA-BP-4983-01A-01R-1334-07 C11orf95-CRTC1 1 3 chr11:63768484:- chr19:18742910:+ FRAMESHIFT NA TCGA-BP-4983-01A-01R-1334-07 UHRF2-VLDLR 1 2 chr9:6434173:+ chr9:2635453:+ FRAMESHIFT NA TCGA-BP-4983-01A-01R-1334-07 CD274-KANK1 1000 1000 chr9:5468208:+ chr9:676890:+ . NA TCGA-BP-4983-01A-01R-1334-07 LLGL1-MARCH10 1000 1000 chr17:7217118:- chr17:62801752:- . NA TCGA-BP-4991-01A-01R-1334-07 PDCD6-TERT 4 29 chr5:272772:+ chr5:1282624:- INFRAME NA TCGA-BP-4991-01A-01R-1334-07 CLPTM1L-PDCD6 1 20 chr5:1320616:- chr5:304177:+ INFRAME NA TCGA-BP-5004-01A-01R-1334-07 FAM172A-ERAP2 2 14 chr5:94050731:- chr5:96915688:+ FRAMESHIFT NA TCGA-BP-5007-01A-01R-1334-07 JMY-PAPD4 2 4 chr5:79237682:+ chr5:79619612:+ . NA TCGA-BP-5170-01A-01R-1426-07 DOCK3-TKT 1 2 chr3:50675300:+ chr3:53242242:- FRAMESHIFT NA TCGA-BP-5175-01A-01R-1426-07 LPCAT1-DAP 19 66 chr5:1523710:- chr5:10683571:- FRAMESHIFT NA TCGA-BP-5175-01A-01R-1426-07 CLPTM1L-CDHR2 13 57 chr5:1341671:- chr5:176581343:+ INFRAME NA TCGA-BP-5175-01A-01R-1426-07 PAIP2-CDC25C 8 69 chr5:139341980:+ chr5:138292116:- . NA TCGA-BP-5175-01A-01R-1426-07 EPB41L4A-ATG10 3 29 chr5:112418941:- chr5:82252562:+ INFRAME NA TCGA-BP-5178-01A-01R-1426-07 RSRC1-MLF1 40 54 chr3:158203245:+ chr3:158592434:+ INFRAME NA TCGA-BP-5186-01A-01R-1426-07 SLC25A17-EPN3 1 3 chr22:40819195:- chr17:50539187:+ INFRAME NA TCGA-BP-5192-01A-01R-1426-07 GLIS3-PLGRKT 20 54 chr9:4117768:- chr9:5361888:- INFRAME NA TCGA-BP-5192-01A-01R-1426-07 RTF1-CATSPER2 5 26 chr15:41438431:+ chr15:43640496:- FRAMESHIFT NA TCGA-BP-5192-01A-01R-1426-07 CALCOCO2-ANKRD13A 6 6 chr17:48849377:+ chr12:110024046:+ FRAMESHIFT NA TCGA-BP-5192-01A-01R-1426-07 MAP2K1-CUX1 2 14 chr15:66387427:+ chr7:102227367:+ FRAMESHIFT NA TCGA-BP-5192-01A-01R-1426-07 DDX19B-KCTD19 1 15 chr16:70299354:+ chr16:67320885:- INFRAME NA TCGA-BP-5192-01A-01R-1426-07 RAB3IP-MYL4 2 4 chr12:69756663:+ chr17:47209389:+ . NA TCGA-BP-5192-01A-01R-1426-07 RNF10-SLC26A5 1 8 chr12:120566980:+ chr7:103379335:- FRAMESHIFT NA TCGA-BP-5198-01A-01R-1426-07 RNF213-RPTOR 1 3 chr17:80313167:+ chr17:80625691:+ INFRAME NA TCGA-BP-5201-01A-01R-1426-07 ADGRL3-AMTN 2 7 chr4:61813889:+ chr4:70523868:+ FRAMESHIFT NA TCGA-BP-5202-01A-02R-1426-07 SERINC5-ZFYVE16 2 9 chr5:80202886:- chr5:80434109:+ . NA TCGA-BP-5202-01A-02R-1426-07 BTRC-HIF1AN 1 8 chr10:101430452:+ chr10:100536411:+ INFRAME NA TCGA-CJ-4640-01A-02R-1325-07 ABI3BP-NBPF9 32 104 chr3:100774605:- chr1:149055899:- FRAMESHIFT NA TCGA-CJ-4640-01A-02R-1325-07 DHX33-NLRP1 5 30 chr17:5460939:- chr17:5501872:- FRAMESHIFT NA TCGA-CJ-4869-01A-02R-1426-07 GXYLT1-YAF2 1 4 chr12:42129759:- chr12:42161765:- INFRAME NA TCGA-CJ-4869-01A-02R-1426-07 DNAJB4-NEXN 1 3 chr1:77979619:+ chr1:77942023:+ . NA TCGA-CJ-4901-01A-01R-1426-07 TICAM1-VMP1 3 13 chr19:4831614:- chr17:59811670:+ . NA TCGA-CJ-4905-01A-02R-1426-07 ADAMTS9-AS2-CFTR 7 61 chr3:64867257:+ chr7:117530899:+ . NA TCGA-CJ-4905-01A-02R-1426-07 ST7-ANKRD7 1 11 chr7:116953691:+ chr7:118426977:+ . NA TCGA-CJ-4907-01A-01R-1426-07 SLMAP-ARF4 1 10 chr3:57923023:+ chr3:57577387:- INFRAME NA TCGA-CJ-4916-01A-01R-1426-07 SEPT8-MEIKIN 5 17 chr5:132760802:- chr5:131911879:- INFRAME NA TCGA-CJ-4918-01A-01R-1426-07 BICC1-UBE2D1 1 2 chr10:58513333:+ chr10:58361338:+ FRAMESHIFT NA TCGA-CJ-4920-01A-01R-1426-07 HNF1B-ANAPC16 2 9 chr17:37731595:- chr10:72230366:+ INFRAME NA TCGA-CJ-4920-01A-01R-1426-07 AGRN-ISG15 2 3 chr1:1022462:+ chr1:1013984:+ FRAMESHIFT NA TCGA-CJ-4923-01A-01R-1426-07 CNOT1-PHKB 18 38 chr16:58551589:- chr16:47562398:+ INFRAME NA TCGA-CJ-4923-01A-01R-1426-07 TRIP12-SLC16A14 12 29 chr2:229858772:- chr2:230037531:- INFRAME NA TCGA-CJ-4923-01A-01R-1426-07 WIPF2-RAPGEFL1 1 9 chr17:40219492:+ chr17:40181616:+ . NA TCGA-CJ-5671-01A-11R-1541-07 ZBTB20-CMSS1 3 14 chr3:114350274:- chr3:100146973:+ INFRAME NA TCGA-CJ-5675-01A-11R-1541-07 RASA1-PTP4A1P4 7 10 chr5:87268990:+ chr5:86087821:+ . Likely Oncogenic NA TCGA-CJ-5677-01A-11R-1541-07 STRN3-METTL3 4 25 chr14:30935163:- chr14:21503881:- INFRAME NA TCGA-CJ-5678-01A-11R-1541-07 EGLN3-SLC25A21 2 4 chr14:34018601:- chr14:36875004:- . NA TCGA-CJ-5680-01A-11R-1541-07 SLC2A13-TERT 1 3 chr12:39951257:- chr5:1282624:- FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 DCX-PASD1 98 356 chrX:111330904:- chrX:151659713:+ FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 HIST1H2AC-LHFPL2 19 42 chr6:26124749:+ chr5:78564871:- . NA TCGA-CJ-5681-01A-11R-1541-07 CRIM1-TACR1 13 56 chr2:36522313:+ chr2:75120768:- FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 TSPEAR-AS2-GABRA3 17 39 chr21:44517835:+ chrX:152284735:- . NA TCGA-CJ-5681-01A-11R-1541-07 TRAPPC10-ZCCHC16 12 55 chr21:44084263:+ chrX:112454500:+ . NA TCGA-CJ-5681-01A-11R-1541-07 DIP2A-THOC2 18 27 chr21:46459222:+ chrX:123668314:- FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 KHSRP-TFE3 15 31 chr19:6415139:- chrX:49038332:- INFRAME NA TCGA-CJ-5681-01A-11R-1541-07 LHFPL2-HIST1H2AC 6 57 chr5:78632264:- chr6:26138054:+ . NA TCGA-CJ-5681-01A-11R-1541-07 BACH1-TENM1 10 35 chr21:29194260:+ chrX:124641991:- . NA TCGA-CJ-5681-01A-11R-1541-07 GABRA3-DIAPH2 7 44 chrX:152208001:- chrX:97348081:+ . NA TCGA-CJ-5681-01A-11R-1541-07 ZBTB21-PFKL 12 14 chr21:42010252:- chr21:44306681:+ . NA TCGA-CJ-5681-01A-11R-1541-07 IGSF1-DSCAM 8 27 chrX:131578668:- chr21:40189238:- . NA TCGA-CJ-5681-01A-11R-1541-07 PLAC1-DSCAM 8 20 chrX:134602051:- chr21:40189238:- . NA TCGA-CJ-5681-01A-11R-1541-07 IGSF1-PLAC1 5 11 chrX:131578668:- chrX:134602122:- . NA TCGA-CJ-5681-01A-11R-1541-07 ZBTB21-AIRE 6 4 chr21:42010252:- chr21:44296383:+ . NA TCGA-CJ-5681-01A-11R-1541-07 CXADR-CMC4 3 15 chr21:17513172:+ chrX:155064033:- . NA TCGA-CJ-5681-01A-11R-1541-07 CXADR-MTCP1 3 15 chr21:17513172:+ chrX:155064033:- . NA TCGA-CJ-5681-01A-11R-1541-07 HUNK-MAMLD1 5 7 chr21:31873935:+ chrX:150469745:+ INFRAME NA TCGA-CJ-5681-01A-11R-1541-07 C2CD2-MID2 2 14 chr21:41953370:- chrX:107840670:+ FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 TMEM164-NDUFV3 1 13 chrX:110173453:+ chr21:42908864:+ . NA TCGA-CJ-5681-01A-11R-1541-07 DIP2A-IT1-THOC2 1 12 chr21:46463228:+ chrX:123668314:- . NA TCGA-CJ-5681-01A-11R-1541-07 MAP3K7CL-VAMP7 1 4 chr21:29085917:+ chrY:57082143:+ FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 AFTPH-THRB 1 3 chr2:64585545:+ chr3:24152490:- FRAMESHIFT NA TCGA-CJ-5681-01A-11R-1541-07 PKNOX1-H2BFM 1000 1000 chr21:42974664:+ chrX:104040828:+ . NA TCGA-CJ-5684-01A-11R-1541-07 WSCD1-NLRP1 4 10 chr17:6095223:+ chr17:5501872:- FRAMESHIFT NA TCGA-CW-5581-01A-02R-1541-07 EGLN3-SLC25A21 63 196 chr14:34018601:- chr14:36875004:- . NA TCGA-CW-5581-01A-02R-1541-07 SMAD3-SLC9A9 28 115 chr15:67066360:+ chr3:143268989:- . Likely Oncogenic NA TCGA-CW-5581-01A-02R-1541-07 AASDH-CC2D2A 5 19 chr4:56378148:- chr4:15563355:+ INFRAME NA TCGA-CW-5581-01A-02R-1541-07 ATP8A1-LDB2 5 7 chr4:42656825:- chr4:16759260:- FRAMESHIFT NA TCGA-CW-5581-01A-02R-1541-07 COPZ1-ONECUT2 3 1 chr12:54325181:+ chr18:57476437:+ FRAMESHIFT NA TCGA-CW-6087-01A-11R-1672-07 DLGAP4-TMEM189 4 11 chr20:36462599:+ chr20:50130947:- INFRAME NA TCGA-CW-6087-01A-11R-1672-07 SMAD3-DLGAP4 3 9 chr15:67066360:+ chr20:36496705:+ FRAMESHIFT Likely Oncogenic NA TCGA-CW-6090-01A-11R-1672-07 FOXP1-GRM7-AS3 2 20 chr3:71299820:- chr3:6635197:- . Likely Oncogenic NA TCGA-CW-6097-01A-11R-1672-07 ARHGEF2-AGO3 1 7 chr1:155957713:- chr1:35966955:+ INFRAME NA TCGA-CZ-4863-01A-01R-1503-07 LRRC41-FAM159A 67 251 chr1:46297563:- chr1:52642863:+ FRAMESHIFT NA TCGA-CZ-5452-01A-01R-1503-07 PRKAB2-FBP2 3 15 chr1:147171989:- chr9:94587469:- FRAMESHIFT NA TCGA-CZ-5456-01A-01R-1503-07 REEP5-ARHGEF3 1 15 chr5:112921163:- chr3:57035176:- . NA TCGA-CZ-5460-01A-01R-1503-07 PLXNB2-NDUFA4L2 1 1 chr22:50285800:- chr12:57237335:- . NA TCGA-CZ-5467-01A-01R-1503-07 TOMM70-IL17RD 1 8 chr3:100400626:- chr3:57120313:- INFRAME NA TCGA-CZ-5468-01A-01R-1503-07 SAE1-WDR18 16 117 chr19:47155213:+ chr19:994020:+ INFRAME NA TCGA-CZ-5468-01A-01R-1503-07 LAS1L-MSN 6 5 chrX:65531357:- chrX:65600662:+ . NA TCGA-CZ-5468-01A-01R-1503-07 VHL-CFAP97 2 20 chr3:10146636:+ chr4:185207791:- . Likely Oncogenic NA TCGA-CZ-5469-01A-01R-1503-07 FAM13A-GAB1 1 3 chr4:88805011:- chr4:143415477:+ FRAMESHIFT NA TCGA-CZ-5470-01A-01R-1503-07 CAPN15-MCRIP2 1 1 chr16:533998:+ chr16:647417:+ . NA TCGA-CZ-5982-01A-11R-1672-07 HS3ST1-CNTN5 3 19 chr4:11428699:- chr11:99556145:+ . NA TCGA-DV-5567-01A-01R-1541-07 EPS8L2-RIOK1 1 1 chr11:709608:+ chr6:7412889:+ FRAMESHIFT NA TCGA-EU-5906-01A-11R-1672-07 TRIT1-MFSD2A 13 37 chr1:39883318:- chr1:39957087:+ INFRAME NA TCGA-EU-5907-01A-11R-1672-07 FRMD4B-LMOD3 3 10 chr3:69287752:- chr3:69109121:- INFRAME NA TCGA-2Z-A9J3-01A-12R-A38C-07 NMT1-HIGD1B 7 72 chr17:45061460:+ chr17:44848102:+ . NA TCGA-2Z-A9JI-01A-11R-A42S-07 TANC2-RHOT1 6 208 chr17:63267873:+ chr17:32253085:+ FRAMESHIFT NA TCGA-2Z-A9JI-01A-11R-A42S-07 MAP3K3-BRIP1 11 10 chr17:63667060:+ chr17:61686165:- INFRAME Likely Oncogenic NA TCGA-2Z-A9JJ-01A-11R-A42S-07 INTS1-MMP23A 14 0 chr7:1483742:- chr1:1700461:+ . NA TCGA-2Z-A9JJ-01A-11R-A42S-07 MTMR12-CARD6 6 12 chr5:32312758:- chr5:40841474:+ FRAMESHIFT NA TCGA-2Z-A9JJ-01A-11R-A42S-07 C1QTNF3-CLPTM1L 5 14 chr5:34028754:- chr5:1318453:- FRAMESHIFT NA TCGA-2Z-A9JO-01A-11R-A42S-07 U2AF2-TFE3 13 15 chr19:55669622:+ chrX:49040568:- INFRAME NA TCGA-4A-A93Y-01A-11R-A37K-07 ZNF420-SULT2B1 2 16 chr19:37008082:+ chr19:48575941:+ . NA TCGA-5P-A9JU-01A-11R-A42S-07 VCAM1-CDC14A 1 4 chr1:100734768:+ chr1:100518251:+ FRAMESHIFT NA TCGA-5P-A9JZ-01A-11R-A42S-07 SRPK2-PRKAR2B 127 351 chr7:105160507:- chr7:107150922:+ INFRAME NA TCGA-5P-A9JZ-01A-11R-A42S-07 SRPK2-ZC3HC1 9 46 chr7:105160507:- chr7:130049144:- FRAMESHIFT NA TCGA-5P-A9JZ-01A-11R-A42S-07 SND1-AKAP9 6 14 chr7:127807573:+ chr7:92105678:+ FRAMESHIFT NA TCGA-5P-A9JZ-01A-11R-A42S-07 ADCK2-SLC26A4 1 20 chr7:140689725:+ chr7:107661639:+ . NA TCGA-5P-A9JZ-01A-11R-A42S-07 DOCK4-NRCAM 2 6 chr7:112206102:- chr7:108312731:- . NA TCGA-5P-A9JZ-01A-11R-A42S-07 COBL-ELDR 1 5 chr7:51172456:- chr7:55238666:- . NA TCGA-A4-7585-01A-11R-2139-07 RBMS1-CCDC148 2 20 chr2:160367216:- chr2:158313894:- INFRAME NA TCGA-A4-7585-01A-11R-2139-07 NUDT19-TDRD12 1 5 chr19:32692674:+ chr19:32818089:+ FRAMESHIFT NA TCGA-A4-7997-01A-11R-2204-07 SAMD4A-TIMM9 2 15 chr14:54568112:+ chr14:58411971:- . NA TCGA-A4-A4ZT-01A-11R-A26U-07 TYW1B-VWC2 6 2 chr7:72807066:- chr7:49912034:+ FRAMESHIFT NA TCGA-A4-A5Y0-01A-11R-A31O-07 CFLAR-AGBL5 32 67 chr2:201133134:+ chr2:27067494:+ FRAMESHIFT NA TCGA-A4-A5Y0-01A-11R-A31O-07 INPP1-HECW2 15 19 chr2:190360306:+ chr2:196433458:- . NA TCGA-A4-A5Y0-01A-11R-A31O-07 UBE2E3-CDC42EP3 5 20 chr2:180984093:+ chr2:37646822:- . NA TCGA-A4-A5Y0-01A-11R-A31O-07 RASAL1-DDX54 5 6 chr12:113114800:- chr12:113166032:- FRAMESHIFT NA TCGA-A4-A5Y0-01A-11R-A31O-07 TTC27-ARHGEF33 1 11 chr2:32634005:+ chr2:38919363:+ . NA TCGA-A4-A5Y0-01A-11R-A31O-07 TTC27-MORN2 1 11 chr2:32634005:+ chr2:38919363:+ . NA TCGA-A4-A5Y0-01A-11R-A31O-07 ANKRD44-FASTKD1 1 3 chr2:197310578:- chr2:169557297:- FRAMESHIFT NA TCGA-AL-3466-01A-02R-1351-07 STK39-CCDC150 1 1 chr2:168129541:- chr2:196718503:+ INFRAME NA TCGA-B9-4114-01A-01R-1193-07 SRPK2-PUS7 1 4 chr7:105388648:- chr7:105508544:- . NA TCGA-B9-4116-01A-02R-1351-07 AKAP9-ZNF3 19 110 chr7:91941147:+ chr7:100077433:- . NA TCGA-B9-4116-01A-02R-1351-07 ZC3HC1-ADAM22 3 27 chr7:130051221:- chr7:88075626:+ INFRAME NA TCGA-B9-4116-01A-02R-1351-07 DOCK4-BCAP29 2 12 chr7:112206102:- chr7:107583882:+ FRAMESHIFT NA TCGA-B9-4116-01A-02R-1351-07 ADAM22-ASB4 3 3 chr7:88125659:+ chr7:95537571:+ INFRAME NA TCGA-B9-4116-01A-02R-1351-07 DYNC1I1-ZC3HAV1 2 7 chr7:95828116:+ chr7:139089759:- INFRAME NA TCGA-B9-4117-01A-02R-1351-07 TNKS-RHOT1 31 180 chr8:9680800:+ chr17:32253085:+ FRAMESHIFT NA TCGA-B9-A44B-01A-11R-A24Z-07 ABCA7-COL5A3 4 80 chr19:1059085:+ chr19:10004145:- INFRAME NA TCGA-B9-A44B-01A-11R-A24Z-07 SNRPA-ANKRD24 3 25 chr19:40751481:+ chr19:4199683:+ FRAMESHIFT NA TCGA-B9-A44B-01A-11R-A24Z-07 C7orf50-CD177 3 17 chr7:1127257:- chr19:43353853:+ FRAMESHIFT NA TCGA-B9-A44B-01A-11R-A24Z-07 PRUNE2-HDAC9 1 3 chr9:76703337:- chr7:18644671:+ FRAMESHIFT NA TCGA-B9-A5W9-01A-11R-A28H-07 ANKRD33B-NIPBL 34 123 chr5:10564833:+ chr5:37058891:+ INFRAME NA TCGA-B9-A5W9-01A-11R-A28H-07 LMBRD2-ADAMTS12 11 83 chr5:36108534:- chr5:33751548:- FRAMESHIFT NA TCGA-B9-A5W9-01A-11R-A28H-07 NDUFS4-TMPRSS2 6 52 chr5:53658624:+ chr21:41466153:- FRAMESHIFT Likely Oncogenic NA TCGA-B9-A5W9-01A-11R-A28H-07 ATP5J-HCN1 13 14 chr21:25734853:- chr5:45462007:- . NA TCGA-B9-A5W9-01A-11R-A28H-07 DYRK1A-HUNK 7 20 chr21:37420384:+ chr21:31924468:+ FRAMESHIFT NA TCGA-B9-A5W9-01A-11R-A28H-07 ITGA2-RNF180 1 26 chr5:52989532:+ chr5:64325186:+ FRAMESHIFT NA TCGA-B9-A5W9-01A-11R-A28H-07 SRD5A1-C1QTNF3 3 13 chr5:6633869:+ chr5:34035758:- FRAMESHIFT NA TCGA-B9-A5W9-01A-11R-A28H-07 EVA1C-TMEM50B 4 6 chr21:32413013:+ chr21:33432802:- . NA TCGA-B9-A5W9-01A-11R-A28H-07 PCBP3-GRIK1 3 7 chr21:45643868:+ chr21:29598937:- . NA TCGA-B9-A5W9-01A-11R-A28H-07 POFUT2-SLC19A1 1 12 chr21:45285678:- chr21:45498612:- INFRAME NA TCGA-B9-A5W9-01A-11R-A28H-07 BRWD1-KIF2A 1 2 chr21:39312841:- chr5:62347130:+ FRAMESHIFT NA TCGA-B9-A69E-01A-11R-A31O-07 CUL9-KIF6 217 807 chr6:43188715:+ chr6:39343815:- INFRAME NA TCGA-B9-A69E-01A-11R-A31O-07 KCNK5-RUNX2 2 4 chr6:39194169:- chr6:45512246:+ INFRAME NA TCGA-B9-A69E-01A-11R-A31O-07 TFEB-CADM2 2 2 chr6:41686090:- chr3:85802047:+ FRAMESHIFT NA TCGA-BQ-5876-01A-11R-1592-07 SLC22A5-RAD50 10 23 chr5:132387151:+ chr5:132640672:+ INFRAME Likely Oncogenic NA TCGA-BQ-5876-01A-11R-1592-07 SPP1-CLU 1 7 chr4:87980434:+ chr8:27606524:- INFRAME NA TCGA-BQ-5878-01A-11R-1592-07 RAB3GAP1-LRP1B 5 8 chr2:135093693:+ chr2:140982276:- FRAMESHIFT NA TCGA-BQ-5878-01A-11R-1592-07 RBMS1-AOX3P 3 10 chr2:160278548:- chr2:200722978:+ . NA TCGA-BQ-5878-01A-11R-1592-07 RBMS1-AOX3P-AOX2P 3 8 chr2:160278548:- chr2:200722978:+ . NA TCGA-BQ-5880-01A-11R-1592-07 SLC47A2-ULK2 1 23 chr17:19718111:- chr17:19771067:- . NA TCGA-BQ-5880-01A-11R-1592-07 REPS2-HBQ1 1 3 chrX:17006344:+ chr16:180666:+ FRAMESHIFT NA TCGA-BQ-5882-01A-11R-1592-07 TFE3-PRCC 49 172 chrX:49039107:- chr1:156782282:+ INFRAME NA TCGA-BQ-5882-01A-11R-1592-07 PRCC-TFE3 50 142 chr1:156768239:+ chrX:49038442:- INFRAME NA TCGA-BQ-5887-01A-11R-1965-07 TFE3-PRCC 15 74 chrX:49039107:- chr1:156786608:+ INFRAME NA TCGA-BQ-5887-01A-11R-1965-07 PRCC-TFE3 18 43 chr1:156768239:+ chrX:49038442:- INFRAME NA TCGA-BQ-5887-01A-11R-1965-07 EEF2K-ACSM3 3 8 chr16:22251322:+ chr16:20769984:+ . NA TCGA-BQ-5889-01A-11R-1592-07 SUPT7L-RBKS 3 19 chr2:27662179:- chr2:27781788:- FRAMESHIFT NA TCGA-BQ-5890-01A-11R-1592-07 CLCF1-PPP1CA 9 139 chr11:67373524:- chr11:67401199:- INFRAME NA TCGA-BQ-5890-01A-11R-1592-07 MRI1-MYO1F 15 37 chr19:13769048:+ chr19:8522829:- INFRAME NA TCGA-BQ-5890-01A-11R-1592-07 PKMYT1-CLDN6 6 44 chr16:2976664:- chr16:3016042:- . NA TCGA-BQ-5890-01A-11R-1592-07 ZNF627-MRI1 4 22 chr19:11604364:+ chr19:13768561:+ . NA TCGA-BQ-5890-01A-11R-1592-07 PNPLA7-EXD3 4 12 chr9:137521636:- chr9:137373599:- INFRAME NA TCGA-BQ-5891-01A-11R-1592-07 PPP1R18-MDC1 16 76 chr6:30687114:- chr6:30700632:- . NA TCGA-BQ-7048-01A-11R-1965-07 TFEB-COL21A1 1000 1000 chr6:41735351:- chr6:56182657:- . NA TCGA-BQ-7050-01A-11R-1965-07 PRCC-TFE3 41 78 chr1:156768239:+ chrX:49038442:- INFRAME NA TCGA-BQ-7051-01A-12R-1965-07 TRABD2B-BEND5 100 391 chr1:47994034:- chr1:48728043:- FRAMESHIFT NA TCGA-DW-7841-01A-11R-A32Z-07 RICTOR-MINPP1 4 8 chr5:38990949:- chr10:87552082:+ INFRAME NA TCGA-DZ-6131-01A-11R-1965-07 RBM10-TFE3 2 174 chrX:47182326:+ chrX:49038114:- INFRAME Likely Oncogenic NA TCGA-F9-A4JJ-01A-11R-A24Z-07 CLASRP-ZNF524 6 17 chr19:45053177:+ chr19:55602075:+ . NA TCGA-F9-A7Q0-01A-11R-A36F-07 ZNF106-ADGRF4 53 101 chr15:42421061:- chr6:47721209:+ . NA TCGA-F9-A7Q0-01A-11R-A36F-07 TBC1D16-ZNF106 4 44 chr17:80035795:- chr15:42424060:- . NA TCGA-F9-A97G-01A-11R-A38C-07 PFKL-AIRE 9 29 chr21:44319828:+ chr21:44288568:+ . NA TCGA-G7-6792-01A-21R-1965-07 KIDINS220-MYT1L 12 73 chr2:8837480:- chr2:2284503:- . NA TCGA-G7-6792-01A-21R-1965-07 KDM3A-CRIM1 12 53 chr2:86464216:+ chr2:36464534:+ INFRAME NA TCGA-G7-6792-01A-21R-1965-07 CRIM1-HAAO 9 31 chr2:36499347:+ chr2:42770582:- FRAMESHIFT NA TCGA-G7-6792-01A-21R-1965-07 SELENOI-MIR3681HG 3 26 chr2:26346289:+ chr2:12131306:+ . NA TCGA-G7-6792-01A-21R-1965-07 ROCK2-NCOA1 3 16 chr2:11343996:- chr2:24643966:+ . NA TCGA-G7-6792-01A-21R-1965-07 NCOA1-LPIN1 1 17 chr2:24584560:+ chr2:11741349:+ . NA TCGA-G7-6792-01A-21R-1965-07 DPY30-IMMT 1 13 chr2:31883386:- chr2:86162079:- . NA TCGA-G7-6792-01A-21R-1965-07 KIF3C-SNTG2 4 1 chr2:25980373:- chr2:1083518:+ INFRAME NA TCGA-G7-6792-01A-21R-1965-07 MEMO1-IMMT 1 13 chr2:31883386:- chr2:86162079:- INFRAME NA TCGA-G7-6792-01A-21R-1965-07 MAP4K3-SMC6 1 8 chr2:39436892:- chr2:17745951:- . NA TCGA-G7-6792-01A-21R-1965-07 TSSC1-SLC5A6 1 4 chr2:3338017:- chr2:27211533:- . NA TCGA-G7-6792-01A-21R-1965-07 DNMT3A-GTF3C2 1 3 chr2:25235707:- chr2:27343578:- . Likely Oncogenic NA TCGA-G7-6792-01A-21R-1965-07 MYT1L-POMC 1000 1000 chr2:2053978:- chr2:25164792:- . NA TCGA-G7-6793-01A-11R-1965-07 FNDC3B-BCHE 91 307 chr3:172133546:+ chr3:165786311:- FRAMESHIFT NA TCGA-G7-6793-01A-11R-1965-07 PIK3CB-HHLA2 25 139 chr3:138759173:- chr3:108351788:+ FRAMESHIFT Likely Oncogenic NA TCGA-G7-6793-01A-11R-1965-07 RPN1-MAP6D1 18 119 chr3:128644919:- chr3:183818111:- INFRAME NA TCGA-G7-6793-01A-11R-1965-07 KLHL24-ATP11B 23 82 chr3:183672484:+ chr3:182913861:+ INFRAME NA TCGA-G7-6793-01A-11R-1965-07 SEMA5B-PLS1 19 56 chr3:122948506:- chr3:142703868:+ FRAMESHIFT NA TCGA-G7-6793-01A-11R-1965-07 PIK3CB-SEMA5B 10 45 chr3:138733361:- chr3:122948709:- FRAMESHIFT Likely Oncogenic NA TCGA-G7-6793-01A-11R-1965-07 RAB7A-PARP15 11 4 chr3:128726359:+ chr3:122605936:+ . NA TCGA-G7-6793-01A-11R-1965-07 RNF213-SLC26A11 3 25 chr17:80358479:+ chr17:80248130:+ FRAMESHIFT NA TCGA-G7-6793-01A-11R-1965-07 TMEM117-MCCC1 2 22 chr12:44299739:+ chr3:183022554:- INFRAME NA TCGA-G7-6793-01A-11R-1965-07 PLS1-PIK3CB 3 16 chr3:142596509:+ chr3:138737886:- . Likely Oncogenic NA TCGA-G7-6793-01A-11R-1965-07 PITPNA-SLC43A2 4 11 chr17:1538869:- chr17:1616769:- FRAMESHIFT NA TCGA-G7-6793-01A-11R-1965-07 LMAN2-DBN1 1 22 chr5:177351173:- chr5:177460703:- INFRAME NA TCGA-G7-6793-01A-11R-1965-07 CDV3-KLHL24 3 13 chr3:133575115:+ chr3:183672296:+ FRAMESHIFT NA TCGA-G7-6793-01A-11R-1965-07 PDIA5-NLGN1 1 12 chr3:123102796:+ chr3:173604279:+ . NA TCGA-G7-6793-01A-11R-1965-07 MRPL33-SLC4A1AP 1 9 chr2:27772692:+ chr2:27675532:+ FRAMESHIFT NA TCGA-G7-6793-01A-11R-1965-07 TPRA1-LPP 1 9 chr3:127579740:- chr3:188866200:+ INFRAME NA TCGA-G7-6793-01A-11R-1965-07 PHLDB2-RAB7A 1 8 chr3:111939630:+ chr3:128795360:+ . NA TCGA-G7-6793-01A-11R-1965-07 YEATS2-PRKCI 2 3 chr3:183697993:+ chr3:170235230:+ . NA TCGA-G7-7501-01A-11R-2204-07 SFPQ-TFE3 73 320 chr1:35189003:- chrX:49040568:- INFRAME NA TCGA-G7-A8LD-01A-11R-A36F-07 TSPAN4-TALDO1 61 172 chr11:847300:+ chr11:755879:+ . NA TCGA-G7-A8LD-01A-11R-A36F-07 CTPS1-ASB3 29 111 chr1:41008890:+ chr2:53670690:- INFRAME NA TCGA-G7-A8LD-01A-11R-A36F-07 LRBA-CHCHD3 37 61 chr4:150277853:- chr7:132796577:- INFRAME NA TCGA-G7-A8LD-01A-11R-A36F-07 OAZ2-SPAST 14 36 chr15:64703029:- chr2:32141904:+ INFRAME NA TCGA-G7-A8LD-01A-11R-A36F-07 ASB3-CTPS1 1 13 chr2:53693884:- chr1:41007449:+ FRAMESHIFT NA TCGA-G7-A8LD-01A-11R-A36F-07 ZNF609-KIAA0753 1 10 chr15:64681387:+ chr17:6579864:- . NA TCGA-GL-7773-01A-11R-A32Z-07 MET-C8orf34 46 104 chr7:116771989:+ chr8:68446329:+ INFRAME NA TCGA-GL-7773-01A-11R-A32Z-07 C8orf34-MET 24 93 chr8:68439646:+ chr7:116774881:+ INFRAME NA TCGA-GL-7966-01A-11R-2204-07 PIP4K2B-RPL23 4 9 chr17:38777687:- chr17:38850475:- FRAMESHIFT NA TCGA-GL-7966-01A-11R-2204-07 UBE2K-UCHL1 1 4 chr4:39698390:+ chr4:41256593:+ . NA TCGA-GL-8500-01A-11R-2404-07 ESYT2-VIPR2 75 195 chr7:158788004:- chr7:159058578:- INFRAME NA TCGA-GL-A4EM-01A-11R-A24Z-07 SLC47A2-ALDH3A1 12 44 chr17:19712703:- chr17:19742212:- INFRAME NA TCGA-GL-A9DE-01A-11R-A37K-07 C14orf2-ACIN1 2 3 chr14:103921470:- chr14:23090101:- . NA TCGA-HE-A5NK-01A-11R-A26U-07 MPRIP-COPS3 5 51 chr17:17078076:+ chr17:17247151:- INFRAME NA TCGA-IA-A40X-01A-11R-A24Z-07 ACSM2B-NOTCH2 4 19 chr16:20575422:- chr1:119922778:- . NA TCGA-J7-8537-01A-11R-2404-07 GSR-CSMD1 26 85 chr8:30684088:- chr8:3029513:- INFRAME NA TCGA-J7-8537-01A-11R-2404-07 TFE3-DVL2 24 71 chrX:49040455:- chr17:7229447:- FRAMESHIFT NA TCGA-J7-8537-01A-11R-2404-07 KIAA0319L-UBA6 18 74 chr1:35506612:- chr4:67668674:- INFRAME NA TCGA-J7-8537-01A-11R-2404-07 DVL2-TFE3 16 46 chr17:7229808:- chrX:49039410:- INFRAME NA TCGA-J7-8537-01A-11R-2404-07 CSDC2-ACO2 3 19 chr22:41561183:+ chr22:41499726:+ . NA TCGA-J7-8537-01A-11R-2404-07 LSM1-NSD3 3 2 chr8:38176275:- chr8:38338607:- FRAMESHIFT NA TCGA-J7-8537-01A-11R-2404-07 THRAP3-TRAPPC3 1 5 chr1:36224505:+ chr1:36140166:- . NA TCGA-J7-A8I2-01A-12R-A36F-07 MIR205HG-RPL14 1000 1000 chr1:209432330:+ chr3:40462064:+ . NA TCGA-MH-A55Z-01A-11R-A26U-07 ETFA-METTL9 2 1 chr15:76311350:- chr16:21612645:+ INFRAME NA TCGA-MH-A855-01A-11R-A355-07 EIF5-NOTCH2 4 13 chr14:103334597:+ chr1:119922446:- . NA TCGA-O9-A75Z-01A-11R-A33Z-07 ABI1-LRRC37A6P 2 7 chr10:26823138:- chr10:27257950:- . NA TCGA-P4-A5EB-01A-11R-A28H-07 PPARA-SAMM50 39 572 chr22:46176836:+ chr22:43989111:+ . NA TCGA-P4-A5EB-01A-11R-A28H-07 SDHA-MIF 39 173 chr5:236599:+ chr22:23894772:+ FRAMESHIFT NA TCGA-P4-A5EB-01A-11R-A28H-07 PICK1-PDCD6 23 66 chr22:38074967:+ chr5:311293:+ FRAMESHIFT NA TCGA-P4-A5EB-01A-11R-A28H-07 BCL2L13-GTPBP1 6 75 chr22:17638886:+ chr22:38730612:+ FRAMESHIFT NA TCGA-P4-A5EB-01A-11R-A28H-07 KLHL22-RANGAP1 9 42 chr22:20446443:- chr22:41256824:- INFRAME NA TCGA-P4-A5EB-01A-11R-A28H-07 PLXNB2-MAST4 10 30 chr22:50283602:- chr5:66899951:+ FRAMESHIFT NA TCGA-P4-A5EB-01A-11R-A28H-07 KIAA1671-NLN 8 9 chr22:24952772:+ chr5:65809515:+ . NA TCGA-P4-A5EB-01A-11R-A28H-07 ZFR-RAI14 4 25 chr5:32444229:- chr5:34795939:+ INFRAME NA TCGA-P4-A5EB-01A-11R-A28H-07 CLPTM1L-SCUBE1 3 26 chr5:1322877:- chr22:43255577:- INFRAME NA TCGA-P4-A5EB-01A-11R-A28H-07 ADSL-CDH18 4 18 chr22:40361342:+ chr5:19981178:- . NA TCGA-P4-A5EB-01A-11R-A28H-07 MARCH6-MTRR 2 18 chr5:10394785:+ chr5:7883155:+ INFRAME NA TCGA-P4-A5EB-01A-11R-A28H-07 TNRC6B-BASP1 1 22 chr22:40156182:+ chr5:17212120:+ . NA TCGA-P4-A5EB-01A-11R-A28H-07 GUSBP11-SHANK3 3 9 chr22:23717031:- chr22:50698690:+ . NA TCGA-P4-A5EB-01A-11R-A28H-07 RNF185-EIF4ENIF1 2 13 chr22:31160303:+ chr22:31471917:- . NA TCGA-P4-A5EB-01A-11R-A28H-07 PDE4D-RNF180 2 12 chr5:59768247:- chr5:64369615:+ FRAMESHIFT NA TCGA-P4-A5EB-01A-11R-A28H-07 ITGA2-MYO18B 2 9 chr5:53058101:+ chr22:25992363:+ INFRAME NA TCGA-P4-A5EB-01A-11R-A28H-07 EFCAB6-OSBP2 1 11 chr22:43782180:- chr22:30694208:+ INFRAME NA TCGA-P4-A5EB-01A-11R-A28H-07 MAPK12-SSTR3 1 10 chr22:50255197:- chr22:37207839:- . NA TCGA-P4-A5EB-01A-11R-A28H-07 TTC28-KIAA1671 1 3 chr22:28679622:- chr22:25190702:+ FRAMESHIFT NA TCGA-P4-A5EB-01A-11R-A28H-07 IPO11-SLC6A19 1 2 chr5:62476753:+ chr5:1218903:+ INFRAME NA TCGA-P4-AAVM-01A-11R-A42S-07 LTBR-PRSS3 73 301 chr12:6386444:+ chr9:33796643:+ INFRAME NA TCGA-PJ-A5Z8-01A-11R-A28H-07 CALU-LAP3 2 1 chr7:128767655:+ chr4:17598456:+ INFRAME NA TCGA-Q2-A5QZ-01A-11R-A28H-07 DPP4-PDK1 25 93 chr2:162045532:- chr2:172586278:+ INFRAME NA TCGA-Q2-A5QZ-01A-11R-A28H-07 GLTSCR1L-PMS1 5 18 chr6:42782101:+ chr2:189863743:+ . NA TCGA-Q2-A5QZ-01A-11R-A28H-07 SLC25A12-ERICH2 5 13 chr2:171991347:- chr2:170798041:+ . NA TCGA-SX-A71S-01A-11R-A33Z-07 NFAT5-CSMD2 19 71 chr16:69566374:+ chr1:33550350:- INFRAME NA TCGA-SX-A7SO-01A-11R-A355-07 SFPQ-TFE3 47 171 chr1:35189003:- chrX:49040568:- INFRAME NA TCGA-UZ-A9PN-01A-11R-A38C-07 FAM134B-TERT 6 53 chr5:16508578:- chr5:1282624:- FRAMESHIFT NA TCGA-UZ-A9PR-01A-11R-A42S-07 APP-ITM2B 1 3 chr21:25975070:- chr13:48253808:+ INFRAME NA TCGA-Y8-A8S1-01A-11R-A37K-07 DNMT3B-MMP9 3 9 chr20:32762699:+ chr20:46009866:+ . NA TCGA-AB-2803-03A-01T-0734-13 PML-RARA 2 22 chr15:74033414:+ chr17:40348316:+ INFRAME NA TCGA-AB-2803-03A-01T-0734-13 RPL32-RP11-1084A12.1 1 12 chr3:12836198:- chr15:34086184:- . NA TCGA-AB-2807-03A-01T-0734-13 DYRK1A-TTC3 1 0 chr21:37420384:+ chr21:37108392:+ FRAMESHIFT NA TCGA-AB-2815-03A-01T-0734-13 CBFB-MYH11 19 23 chr16:67082339:+ chr16:15721051:- FRAMESHIFT NA TCGA-AB-2817-03A-01T-0736-13 CAMKK2-KDM2B 1 0 chr12:121245140:- chr12:121453344:- FRAMESHIFT NA TCGA-AB-2818-03A-01T-0734-13 LIMS1-LIMS4 1 13 chr2:108684114:+ chr2:110451887:- . NA TCGA-AB-2819-03A-01T-0734-13 RUNX1-RUNX1T1 1 159 chr21:34859474:- chr8:92017363:- INFRAME Likely Oncogenic NA TCGA-AB-2819-03A-01T-0734-13 MIR1244-2-PTMAP5 1 10 chr5:118974651:+ chr13:81690786:+ . NA TCGA-AB-2820-03A-01T-0735-13 GOSR1-ZNF207 1 18 chr17:30484770:+ chr17:32369295:+ INFRAME NA TCGA-AB-2823-03A-01T-0736-13 PML-RARA 9 41 chr15:74023408:+ chr17:40348316:+ INFRAME NA TCGA-AB-2823-03A-01T-0736-13 RAB2A-CLVS1 5 6 chr8:60517253:+ chr8:61131770:+ . NA TCGA-AB-2823-03A-01T-0736-13 PIK3CB-PCCB 1 0 chr3:138834695:- chr3:136260479:+ . Likely Oncogenic NA TCGA-AB-2828-03A-01T-0734-13 CBFB-MYH11 1 52 chr16:67082339:+ chr16:15727054:- FRAMESHIFT NA TCGA-AB-2828-03A-01T-0734-13 NOD2-RP11-327F22.4 2 20 chr16:50712401:+ chr16:50784189:- . NA TCGA-AB-2832-03A-01T-0736-13 ABR-YWHAE 1 0 chr17:1228793:- chr17:1365058:- . NA TCGA-AB-2832-03A-01T-0736-13 KMT2A-MLLT10 7 6 chr11:118225744:+ chr10:22248307:+ FRAMESHIFT Likely Oncogenic NA TCGA-AB-2832-03A-01T-0736-13 SIK3-C11orf1 6 7 chr11:118225744:- chr10:22248307:+ INFRAME NA TCGA-AB-2834-03A-01T-0734-13 KMT2A-ELL 1 21 chr11:118473834:+ chr19:18450570:- FRAMESHIFT Likely Oncogenic NA TCGA-AB-2839-03A-01T-0734-13 LRRC37A4P-LRRC37A3 1 17 chr17:45508054:- chr17:64854471:- . NA TCGA-AB-2839-03A-01T-0734-13 CDK12-FBXL20 1 0 chr17:39471763:+ chr17:39343241:- FRAMESHIFT Likely Oncogenic NA TCGA-AB-2840-03A-01T-0734-13 PML-RARA 5 27 chr15:74023408:+ chr17:40348316:+ INFRAME NA TCGA-AB-2841-03B-01T-0760-13 PML-RARA 1 27 chr15:74024927:+ chr17:40348316:+ FRAMESHIFT NA TCGA-AB-2842-03A-01T-0734-13 KMT2A-MLLT10 15 4 chr11:118223925:+ chr10:22164152:+ FRAMESHIFT Likely Oncogenic NA TCGA-AB-2844-03A-01T-0736-13 LYZ-IRAK1 1 0 chr12:69348514:+ chrX:154010742:- . NA TCGA-AB-2844-03A-01T-0736-13 KMT2A-ELL 13 25 chr11:118223925:+ chr19:18687538:- FRAMESHIFT Likely Oncogenic NA TCGA-AB-2846-03A-01T-0736-13 CBFB-MYH11 1 36 chr16:67029439:+ chr16:15717156:- FRAMESHIFT NA TCGA-AB-2849-03A-01T-0734-13 PICALM-MLLT10 2 30 chr11:85981129:- chr10:21651673:+ INFRAME NA TCGA-AB-2849-03A-01T-0734-13 GSK3B-TIAM1 1 0 chr3:120002194:- chr21:31225844:- FRAMESHIFT NA TCGA-AB-2853-03A-01T-0734-13 PAN3-FLT3 1 0 chr13:28220378:+ chr13:28070612:- INFRAME NA TCGA-AB-2855-03A-01T-0736-13 PICALM-MLLT10 2 46 chr11:85974708:- chr10:21661023:+ . NA TCGA-AB-2857-03A-01T-0736-13 PRMT1-TLE6 1 15 chr19:49677316:+ chr19:2980100:+ INFRAME NA TCGA-AB-2857-03A-01T-0736-13 WDR18-H2AFX 4 13 chr19:985975:+ chr11:118964971:- INFRAME NA TCGA-AB-2858-03A-01T-0736-13 RUNX1-RUNX1T1 1 292 chr21:34888217:- chr8:92005225:- . Likely Oncogenic NA TCGA-AB-2862-03A-01T-0736-13 PML-RARA 6 82 chr15:74033414:+ chr17:40348316:+ INFRAME NA TCGA-AB-2868-03A-01T-0736-13 GAPVD1-PTGR1 3 9 chr9:125261959:+ chr9:111549799:- . NA TCGA-AB-2868-03A-01T-0736-13 RRN3P2-BANP 1 10 chr16:29096155:+ chr16:87981075:+ . NA TCGA-AB-2868-03A-01T-0736-13 CTSS-HP1BP3 1 0 chr1:150751560:- chr1:20743407:- . NA TCGA-AB-2872-03A-01T-0735-13 PML-RARA 3 25 chr15:74033414:+ chr17:40348316:+ INFRAME NA TCGA-AB-2874-03A-01T-0735-13 RPS5-MPO 1 7 chr19:58394551:+ chr17:58270002:- . NA TCGA-AB-2874-03A-01T-0735-13 RPS8-MPO 1 4 chr1:44775909:+ chr17:58280911:- . NA TCGA-AB-2875-03A-01T-0735-13 RUNX1-RUNX1T1 1 341 chr21:34859474:- chr8:92017363:- INFRAME Likely Oncogenic NA TCGA-AB-2875-03A-01T-0735-13 LYZ-SMG1 1 1 chr12:69353485:+ chr16:18807805:- . NA TCGA-AB-2875-03A-01T-0735-13 STK10-SNX2 1 0 chr5:172082325:- chr5:122817348:+ . NA TCGA-AB-2879-03A-01T-0735-13 RPL13-MPO 1 0 chr16:89563433:+ chr17:58270004:- . NA TCGA-AB-2880-03A-01T-0735-13 ANAPC2-CEBPA 23 0 chr9:137180506:- chr19:33301511:- INFRAME Likely Oncogenic NA TCGA-AB-2881-03A-01T-0735-13 CBFB-MYH11 20 17 chr16:67082339:+ chr16:15721051:- FRAMESHIFT NA TCGA-AB-2882-03A-01T-0740-13 CHMP6-RPTOR 1 0 chr17:80999394:+ chr17:80857789:+ . NA TCGA-AB-2884-03A-01T-0735-13 ABR-YWHAE 1 0 chr17:1228793:- chr17:1365058:- . NA TCGA-AB-2886-03A-01T-0735-13 RUNX1-RUNX1T1 4 482 chr21:34859474:- chr8:92017363:- INFRAME Likely Oncogenic NA TCGA-AB-2888-03B-01T-0748-13 DSTYK-NUCKS1 1 0 chr1:205211271:- chr1:205729621:- FRAMESHIFT NA TCGA-AB-2888-03B-01T-0748-13 CBFB-MYH11 8 9 chr16:67082339:+ chr16:15721051:- FRAMESHIFT NA TCGA-AB-2889-03A-01T-0735-13 CBFB-MYH11 1 69 chr16:67036652:+ chr16:15720975:- FRAMESHIFT NA TCGA-AB-2889-03A-01T-0735-13 EEF1A1-MPO 1 7 chr6:73519921:- chr17:58269880:- . NA TCGA-AB-2896-03B-01T-0751-13 COX6B1-COX6B1P4 1 8 chr19:35651258:+ chr8:26836217:- . NA TCGA-AB-2897-03A-01T-0735-13 PML-RARA 3 37 chr15:74033414:+ chr17:40348316:+ INFRAME NA TCGA-AB-2897-03A-01T-0735-13 MKNK2-RNF126 3 6 chr19:2041840:- chr19:652884:- INFRAME NA TCGA-AB-2904-03A-01T-0734-13 DNMT3B-MDM4 1 17 chr20:32802470:+ chr1:204525484:+ . NA TCGA-AB-2908-03A-01T-0740-13 PRSS2-PRSS1 1 13 chr7:142772167:+ chr7:142751797:+ FRAMESHIFT NA TCGA-AB-2910-03A-01T-0740-13 KAT6A-CREBBP 2 12 chr8:41937256:- chr16:3851009:- INFRAME Likely Oncogenic NA TCGA-AB-2911-03A-01T-0734-13 LILRB3-LILRB4 2 13 chr19:54218382:- chr19:54666465:+ . NA TCGA-AB-2911-03A-01T-0734-13 KMT2A-ELL 1 11 chr11:118484975:+ chr19:18458329:- INFRAME Likely Oncogenic NA TCGA-AB-2911-03A-01T-0734-13 LYZ-SMG1 1 1 chr12:69353479:+ chr16:18807811:- . NA TCGA-AB-2914-03A-01T-0734-13 CBFB-MYH11 2 41 chr16:67082339:+ chr16:15721051:- FRAMESHIFT NA TCGA-AB-2915-03A-01T-0740-13 RUNX1-MECOM 1 67 chr21:34834410:- chr3:169381524:- INFRAME Likely Oncogenic NA TCGA-AB-2915-03A-01T-0740-13 DPM1-GRID1 2 16 chr20:50955186:- chr10:85916239:- INFRAME NA TCGA-AB-2915-03A-01T-0740-13 MAPK1-SSU72 1 0 chr22:21760843:- chr1:1562576:- . NA TCGA-AB-2915-03A-01T-0740-13 WNK1-RAD52 1 0 chr12:896455:+ chr12:916675:- INFRAME NA TCGA-AB-2920-03B-01T-0760-13 KPNB1-ACE3P 10 12 chr17:47658660:+ chr17:63507056:+ . NA TCGA-AB-2920-03B-01T-0760-13 CHST11-ATP1B4 4 20 chr12:104601991:+ chrX:120366525:+ INFRAME NA TCGA-AB-2920-03B-01T-0760-13 WSB1-NBR1 4 6 chr17:27294435:+ chr17:43175791:+ . NA TCGA-AB-2920-03B-01T-0760-13 ABR-YWHAE 1 0 chr17:1228793:- chr17:1365058:- . NA TCGA-AB-2920-03B-01T-0760-13 KSR1-TENM1 4 7 chr12:25877734:+ chrX:123695667:- INFRAME NA TCGA-AB-2921-03A-01T-0740-13 SRPK2-SRPK2P 1 10 chr7:105117393:- chr8:62863300:- . NA TCGA-AB-2929-03A-01T-0735-13 GGA2-PRKCB 1 0 chr16:23467213:- chr16:24219622:+ . NA TCGA-AB-2930-03A-01T-0740-13 NUP98-NSD1 2 6 chr11:3753316:- chr5:177235821:+ INFRAME Likely Oncogenic NA TCGA-AB-2932-03A-01T-0740-13 SLC29A3-UNC5B 1 0 chr10:71351650:+ chr10:71302559:+ . NA TCGA-AB-2935-03A-01T-0740-13 NUCB1-RUVBL2 2 17 chr19:48904454:+ chr19:49009776:+ INFRAME NA TCGA-AB-2937-03A-01T-0734-13 RUNX1-RUNX1T1 3 210 chr21:34859474:- chr8:92017363:- INFRAME Likely Oncogenic NA TCGA-AB-2937-03A-01T-0734-13 RPL37-RP1-228P16.1 1 8 chr5:40830838:- chr12:48055163:- . NA TCGA-AB-2938-03A-01T-0736-13 ZBTB7A-TNK1 1 329 chr19:4055119:- chr17:7382850:+ . NA TCGA-AB-2938-03A-01T-0736-13 C20orf203-NOL4L 1 22 chr20:32632929:- chr20:32527913:- . NA TCGA-AB-2939-03A-01T-0740-13 CHD1-MTOR 10 22 chr5:98863408:- chr1:11213566:- FRAMESHIFT NA TCGA-AB-2942-03A-01T-0734-13 CBFB-MYH11 1 15 chr16:67082305:+ chr16:15721053:- . NA TCGA-AB-2944-03A-01T-0740-13 MECOM-RPN1 12 26 chr3:169663336:- chr3:128644983:- FRAMESHIFT NA TCGA-AB-2949-03B-01T-0748-13 RPL10-RPL10P6 1 82 chrX:154400877:+ chr2:214847401:+ . NA TCGA-AB-2950-03A-01T-0735-13 RUNX1-RUNX1T1 1 453 chr21:34887012:- chr8:92062663:- INFRAME Likely Oncogenic NA TCGA-AB-2954-03A-01T-0736-13 CBFB-MYH11 1 48 chr16:67082339:+ chr16:15721051:- FRAMESHIFT NA TCGA-AB-2954-03A-01T-0736-13 LYZ-STK10 1 0 chr12:69353978:+ chr5:172043346:- . NA TCGA-AB-2956-03A-01T-0740-13 KMT2A-MLLT3 1 52 chr11:118353210:+ chr9:20365742:- FRAMESHIFT Likely Oncogenic NA TCGA-AB-2956-03A-01T-0740-13 VTI1B-RDH11 3 9 chr14:67674375:- chr14:67693052:- FRAMESHIFT NA TCGA-AB-2964-03A-01T-0734-13 RPSAP26-RPSAP53 1 9 chr2:62146840:+ chr13:67266885:- . NA TCGA-AB-2980-03A-01T-0734-13 PML-RARA 4 30 chr15:74023408:+ chr17:40348316:+ INFRAME NA TCGA-AB-2982-03B-01T-0748-13 PML-RARA 4 23 chr15:74033414:+ chr17:40348316:+ INFRAME NA TCGA-AB-2984-03A-01T-0734-13 ABR-YWHAE 1 0 chr17:1228793:- chr17:1365058:- . NA TCGA-AB-2985-03A-01T-0734-13 HBG1-HBE1 1 8 chr11:5248408:- chr11:5269468:- FRAMESHIFT NA TCGA-AB-2985-03A-01T-0734-13 KMT2A-MLLT10 9 4 chr11:118226405:+ chr10:22229531:+ FRAMESHIFT Likely Oncogenic NA TCGA-AB-2990-03B-01T-0748-13 ANKRD28-FLT3 1 0 chr3:15679476:- chr13:28028288:- FRAMESHIFT NA TCGA-AB-2991-03A-01T-0735-13 PML-RARA 2 57 chr15:74023408:+ chr17:40348316:+ INFRAME NA TCGA-AB-2991-03A-01T-0735-13 SPN-MPO 1 8 chr16:29665434:+ chr17:58278190:- . NA TCGA-AB-2991-03A-01T-0735-13 MPO-NTNG2 1 6 chr17:58279036:- chr9:132243684:+ . NA TCGA-AB-2993-03A-01T-0735-13 RPS8-MPO 1 0 chr1:44775906:+ chr17:58280915:- . NA TCGA-AB-2998-03A-01T-0735-13 PML-RARA 8 55 chr15:74023408:+ chr17:40348316:+ INFRAME NA TCGA-AB-2999-03B-01T-0748-13 PML-RARA 2 15 chr15:74033414:+ chr17:40348316:+ INFRAME NA TCGA-AB-2999-03B-01T-0748-13 WNK1-RAD52 1 0 chr12:868503:+ chr12:913192:- . NA TCGA-AB-3001-03A-01T-0736-13 PML-RARA 7 59 chr15:74023408:+ chr17:40342754:+ INFRAME NA TCGA-AB-3005-03A-01T-0736-13 PDCD6IPP1-PDCD6IPP2 1 8 chr15:22727172:+ chr15:28856220:+ . NA TCGA-AB-3005-03A-01T-0736-13 MTND2P28-CD74 1 6 chr1:630642:+ chr5:150401947:- . NA TCGA-AB-3005-03A-01T-0736-13 KMT2A-MLLT10 9 7 chr11:118221668:+ chr10:22291630:+ FRAMESHIFT Likely Oncogenic NA TCGA-AB-3007-03A-01T-0736-13 PML-RARA 10 67 chr15:74023408:+ chr17:40348316:+ INFRAME NA TCGA-AB-3007-03A-01T-0736-13 RPL13-MPO 1 5 chr16:89561671:+ chr17:58271859:- INFRAME NA TCGA-AB-3012-03A-01T-0736-13 PML-RARA 1 76 chr15:74024927:+ chr17:40348316:+ FRAMESHIFT NA TCGA-CS-4941-01A-01R-1470-07 CPSF6-PTPRB 970 3430 chr12:69239706:+ chr12:70581302:- FRAMESHIFT NA TCGA-CS-4942-01A-01R-1470-07 REV3L-FN3KRP 2 27 chr6:111307361:- chr17:82726480:+ INFRAME NA TCGA-CS-4942-01A-01R-1470-07 FMR1-AFF2 2 23 chrX:147921985:+ chrX:148651999:+ INFRAME NA TCGA-CS-4942-01A-01R-1470-07 MAP3K13-UTS2B 3 17 chr3:185363368:+ chr3:191328709:- . NA TCGA-CS-4943-01A-01R-1470-07 RAD51AP1-ST8SIA1 37 107 chr12:4538956:+ chr12:22249098:- INFRAME NA TCGA-CS-4943-01A-01R-1470-07 TOMM70-KCTD8 24 125 chr3:100400626:- chr4:44175250:- FRAMESHIFT NA TCGA-CS-4943-01A-01R-1470-07 ARL5B-CCDC102B 3 11 chr10:18659683:+ chr18:68716528:+ . NA TCGA-CS-4943-01A-01R-1470-07 ZNF577-GRIK5 1 17 chr19:51877282:- chr19:42006810:- FRAMESHIFT NA TCGA-CS-4943-01A-01R-1470-07 UBE2E1-ZNF385D 1 3 chr3:23807421:+ chr3:21437203:- FRAMESHIFT NA TCGA-CS-4944-01A-01R-1470-07 PTGDS-CLU 1 25 chr9:136977692:+ chr8:27598250:- FRAMESHIFT NA TCGA-CS-5393-01A-01R-1470-07 ADNP2-PARD6G 1 2 chr18:80109472:+ chr18:80202932:- . NA TCGA-CS-5395-01A-01R-1470-07 LIN9-KDM5B 7 22 chr1:226277775:- chr1:202777094:- FRAMESHIFT NA TCGA-CS-5397-01A-01R-1896-07 RUSC2-ABAT 34 34 chr9:35490172:+ chr16:8764069:+ . NA TCGA-CS-5397-01A-01R-1896-07 SMOX-EIF3D 16 52 chr20:4148977:+ chr22:36526131:- . NA TCGA-CS-5397-01A-01R-1896-07 AIP-LYZL6 8 48 chr11:67483257:+ chr17:35939558:- . NA TCGA-CS-5397-01A-01R-1896-07 SYS1-TAF15 1 20 chr20:45363693:+ chr17:35842367:+ FRAMESHIFT NA TCGA-CS-5397-01A-01R-1896-07 MKL2-ZNF200 4 4 chr16:14234283:+ chr16:3235360:- . NA TCGA-CS-5397-01A-01R-1896-07 SHB-GRIN2A 3 6 chr9:37955883:- chr16:9849961:- FRAMESHIFT NA TCGA-CS-5397-01A-01R-1896-07 TXN2-CTNNA1 3 6 chr22:36480575:- chr5:138723467:+ . NA TCGA-CS-5397-01A-01R-1896-07 ABAT-KIAA0430 1 12 chr16:8674711:+ chr16:15612777:- . NA TCGA-CS-5397-01A-01R-1896-07 FAM219A-MKL2 3 4 chr9:34458204:- chr16:14210243:+ FRAMESHIFT NA TCGA-CS-5397-01A-01R-1896-07 UTP6-PABPC1L 1 10 chr17:31878250:- chr20:44930518:+ INFRAME NA TCGA-CS-5397-01A-01R-1896-07 CDIP1-SGF29 1 4 chr16:4538702:- chr16:28581055:+ . NA TCGA-CS-5397-01A-01R-1896-07 SHISA9-CCL19 1 4 chr16:13203549:+ chr9:34690342:- INFRAME NA TCGA-CS-6186-01A-12R-2027-07 LRP1-BCAN 1 5 chr12:57202537:+ chr1:156657675:+ INFRAME NA TCGA-CS-6186-01A-12R-2027-07 SCAMP2-DBN1 2 1 chr15:74873199:- chr5:177460703:- INFRAME NA TCGA-CS-6188-01A-11R-1896-07 MFSD2A-LAPTM5 27 241 chr1:39955385:+ chr1:30742549:- INFRAME NA TCGA-CS-6188-01A-11R-1896-07 SNIP1-KIF17 3 59 chr1:37552645:- chr1:20666331:- INFRAME NA TCGA-CS-6188-01A-11R-1896-07 HDAC9-CPQ 1 7 chr7:18087213:+ chr8:97066009:+ . NA TCGA-CS-6290-01A-11R-1708-07 ATRX-ZNF304 10 52 chrX:77785982:- chr19:57353725:+ FRAMESHIFT Likely Oncogenic NA TCGA-CS-6665-01A-11R-1896-07 DCUN1D4-SGCB 22 93 chr4:51843267:+ chr4:52033640:- FRAMESHIFT NA TCGA-CS-6665-01A-11R-1896-07 VMP1-SUZ12P1 3 10 chr17:59738947:+ chr17:30768834:+ . NA TCGA-CS-6665-01A-11R-1896-07 LNX1-DANCR 2 4 chr4:53557874:- chr4:52712824:+ . NA TCGA-CS-6666-01A-11R-1896-07 FBXW7-TMEM126B 3 9 chr4:152534941:- chr11:85634086:+ . Likely Oncogenic NA TCGA-CS-6666-01A-11R-1896-07 ZBTB7C-FBXO15 3 4 chr18:48338174:- chr18:74073730:- . NA TCGA-CS-6666-01A-11R-1896-07 HDAC4-BRAT1 2 7 chr2:239081095:- chr7:2554447:- . NA TCGA-DB-5270-01A-02R-1470-07 SHC2-TJP3 5 16 chr19:440862:- chr19:3750138:+ FRAMESHIFT NA TCGA-DB-5270-01A-02R-1470-07 CCDC94-MAP2K2 1 4 chr19:4254489:+ chr19:4110655:- INFRAME NA TCGA-DB-5270-01A-02R-1470-07 ZNF704-FAM49B 1 3 chr8:80821374:- chr8:129842205:- INFRAME NA TCGA-DB-5275-01A-01R-1470-07 FARP1-NME1 23 213 chr13:98213413:+ chr17:51159980:+ INFRAME NA TCGA-DB-5275-01A-01R-1470-07 SPAG9-CLYBL 1 34 chr17:51120354:- chr13:99866240:+ FRAMESHIFT NA TCGA-DB-5277-01A-01R-1470-07 GRIA4-NAALAD2 28 113 chr11:105862208:+ chr11:90173824:+ INFRAME NA TCGA-DB-5277-01A-01R-1470-07 IGDCC3-GLDN 34 69 chr15:65375097:- chr15:51383785:+ INFRAME NA TCGA-DB-5277-01A-01R-1470-07 BICD1-ZNF438 4 6 chr12:32338979:+ chr10:30849443:- INFRAME NA TCGA-DB-5277-01A-01R-1470-07 SPRED2-NAPG 2 14 chr2:65431962:- chr18:10530770:+ INFRAME NA TCGA-DB-5277-01A-01R-1470-07 PCNT-DIP2A 3 9 chr21:46367139:+ chr21:46560722:+ INFRAME NA TCGA-DB-5277-01A-01R-1470-07 SLCO3A1-HDDC3 2 11 chr15:91854088:+ chr15:90932110:- FRAMESHIFT NA TCGA-DB-5277-01A-01R-1470-07 FBN1-THSD4 1 6 chr15:48610728:- chr15:71660530:+ FRAMESHIFT NA TCGA-DB-5277-01A-01R-1470-07 SCAPER-ZNF592 1 6 chr15:76504859:- chr15:84778183:+ . NA TCGA-DB-5277-01A-01R-1470-07 PIGG-SUGCT 1 2 chr4:500601:+ chr7:40749434:+ INFRAME NA TCGA-DB-5281-01A-01R-1470-07 CTNND2-MTMR12 1 21 chr5:11346372:- chr5:32263242:- FRAMESHIFT NA TCGA-DB-A4XB-01A-11R-A26U-07 DNM2-PDE4A 3 14 chr19:10718403:+ chr19:10446218:+ INFRAME NA TCGA-DB-A4XB-01A-11R-A26U-07 PHKA1-HDAC8 1 1 chrX:72695708:- chrX:72351838:- FRAMESHIFT NA TCGA-DB-A4XE-01A-11R-A27Q-07 MINDY3-CACNB2 1 4 chr10:15860206:- chr10:18498355:+ FRAMESHIFT NA TCGA-DB-A4XF-01A-11R-A27Q-07 ATRX-BCL2 13 74 chrX:77785982:- chr18:63128759:- FRAMESHIFT Likely Oncogenic NA TCGA-DB-A4XF-01A-11R-A27Q-07 BCAS3-RNFT1 3 10 chr17:61084564:+ chr17:59963284:- FRAMESHIFT NA TCGA-DB-A4XF-01A-11R-A27Q-07 SBNO1-RILPL2 3 6 chr12:123364701:- chr12:123423157:- . NA TCGA-DB-A4XH-01A-11R-A27Q-07 CNN2-C2CD4C 2 20 chr19:1031192:+ chr19:408401:- . NA TCGA-DB-A4XH-01A-11R-A27Q-07 PLEKHA7-ABCC8 1 2 chr11:17013989:- chr11:17463604:- FRAMESHIFT NA TCGA-DB-A64O-01A-11R-A29R-07 WASF2-TMEM222 2 41 chr1:27489986:- chr1:27330720:+ . NA TCGA-DB-A64P-01A-11R-A29R-07 PHACTR4-FAM76A 1 4 chr1:28407463:+ chr1:27755195:+ FRAMESHIFT NA TCGA-DB-A64Q-01A-11R-A29R-07 ACACA-WASIR2 6 14 chr17:37111531:- chr16:22958:+ . NA TCGA-DB-A64U-01A-11R-A29R-07 C19orf24-PALM 2 22 chr19:1275830:+ chr19:726138:+ INFRAME NA TCGA-DB-A64V-01A-11R-A29R-07 ADGRL3-GPM6A 2 1 chr4:61201765:+ chr4:175701767:- . NA TCGA-DB-A64X-01A-11R-A29R-07 ADGRL3-DBX2 1 7 chr4:61587440:+ chr12:45036114:- FRAMESHIFT NA TCGA-DB-A75O-01A-11R-A32Q-07 CLOCK-NMU 1 18 chr4:55546482:- chr4:55600575:- . NA TCGA-DB-A75O-01A-11R-A32Q-07 NMT1-NLK 1 5 chr17:45096285:+ chr17:28122603:+ INFRAME NA TCGA-DB-A75O-01A-11R-A32Q-07 RNF6-USP18 1000 1000 chr13:26218512:- chr22:18176771:+ . NA TCGA-DH-5140-01A-01R-1470-07 SOX10-FAM168A 78 429 chr22:37977867:- chr11:73411536:- INFRAME NA TCGA-DH-5142-01A-01R-1470-07 AMBRA1-CCDC61 8 21 chr11:46593828:- chr19:46003008:+ . NA TCGA-DH-5142-01A-01R-1470-07 CCDC61-CHST1 2 23 chr19:46003501:+ chr11:45652606:- . NA TCGA-DH-A669-01A-12R-A31N-07 PARD3-LYAR 52 214 chr10:34814876:- chr4:4274769:- INFRAME NA TCGA-DH-A669-01A-12R-A31N-07 NSD2-CPLX1 1 305 chr4:1918623:+ chr4:792608:- FRAMESHIFT NA TCGA-DH-A669-01A-12R-A31N-07 ZMYND11-SORBS2 14 137 chr10:247466:+ chr4:185593935:- INFRAME NA TCGA-DH-A669-01A-12R-A31N-07 PPP2R2C-CTBP1 4 18 chr4:6347846:- chr4:1213605:- FRAMESHIFT NA TCGA-DH-A669-01A-12R-A31N-07 PDLIM3-ZFYVE28 3 20 chr4:185535342:- chr4:2354073:- INFRAME NA TCGA-DH-A669-01A-12R-A31N-07 FAM193A-PPP2R2C 3 13 chr4:2631169:+ chr4:6333731:- FRAMESHIFT NA TCGA-DH-A669-01A-12R-A31N-07 ZFYVE28-CCDC149 2 9 chr4:2418285:- chr4:24876697:- INFRAME NA TCGA-DH-A669-01A-12R-A31N-07 C4orf19-FAM114A1 2 3 chr4:37454040:+ chr4:38922770:+ . NA TCGA-DH-A66B-01A-11R-A29R-07 DENND1A-ASTN2 12 36 chr9:123557570:- chr9:116426088:- FRAMESHIFT NA TCGA-DH-A66G-01A-21R-A31N-07 SCN8A-ATF1 7 6 chr12:51790502:+ chr12:50795909:+ INFRAME NA TCGA-DH-A66G-01A-21R-A31N-07 PABPC1-KHDRBS3 2 4 chr8:100712652:- chr8:135542654:+ INFRAME NA TCGA-DH-A66G-01A-21R-A31N-07 AACS-TMEM132B 2 2 chr12:125118765:+ chr12:125583851:+ FRAMESHIFT NA TCGA-DH-A7UT-01A-12R-A34F-07 ADAMTS20-C12orf43 2 1 chr12:43369290:- chr12:121004492:- FRAMESHIFT NA TCGA-DH-A7UV-01A-12R-A34F-07 GDF11-HOXC8 1 6 chr12:55749883:+ chr12:54011089:+ . NA TCGA-DH-A7UV-01A-12R-A34F-07 LANCL2-VOPP1 1000 1000 chr7:55412089:+ chr7:55497690:- FRAMESHIFT NA TCGA-DU-5847-01A-11R-1708-07 MALRD1-PIP4K2A 1 4 chr10:19730781:+ chr10:22609717:- INFRAME NA TCGA-DU-5852-01A-11R-1708-07 EGFR-SEPT14 1 1 chr7:55202625:+ chr7:55796092:- FRAMESHIFT Likely Oncogenic NA TCGA-DU-5853-01A-11R-1896-07 TP53-GID4 5 32 chr17:7687377:- chr17:18045147:+ . Likely Oncogenic NA TCGA-DU-5853-01A-11R-1896-07 SNX30-LPAR1 1 4 chr9:112751157:+ chr9:110875722:- FRAMESHIFT NA TCGA-DU-5854-01A-11R-1708-07 ADGRL3-GPM6A 4 5 chr4:61813889:+ chr4:175701767:- INFRAME NA TCGA-DU-5854-01A-11R-1708-07 PARK2-STRADA 1 10 chr6:161548854:- chr17:63704582:- INFRAME NA TCGA-DU-5855-01A-11R-1708-07 PTPN12-DYNC1I1 104 250 chr7:77537645:+ chr7:96076057:+ INFRAME NA TCGA-DU-5855-01A-11R-1708-07 CAMK2D-ANK2 11 32 chr4:113515069:- chr4:113258050:+ INFRAME NA TCGA-DU-5855-01A-11R-1708-07 ZBTB44-BACE1 1 13 chr11:130236110:- chr11:117296961:- . NA TCGA-DU-5855-01A-11R-1708-07 MRE11-YAP1 1 7 chr11:94429911:- chr11:102162456:+ FRAMESHIFT Likely Oncogenic NA TCGA-DU-5871-01A-12R-1708-07 MARCH8-DEFB119 2 11 chr10:45594235:- chr20:31378391:- . NA TCGA-DU-5871-01A-12R-1708-07 SFMBT2-TGM2 1 11 chr10:7367649:- chr20:38161599:- INFRAME NA TCGA-DU-5871-01A-12R-1708-07 ATG7-PPARG 1 4 chr3:11426926:+ chr3:12433898:+ INFRAME NA TCGA-DU-5871-01A-12R-1708-07 SETD7-CREM 1 3 chr4:139517885:- chr10:35148368:+ INFRAME NA TCGA-DU-6395-01A-13R-1708-07 NPHP4-ACOT7 2 19 chr1:5992244:- chr1:6294980:- . NA TCGA-DU-6395-01A-13R-1708-07 KCNAB2-KIF1B 2 3 chr1:5992788:+ chr1:10256247:+ . NA TCGA-DU-6396-01A-11R-1708-07 BSN-ARL8B 1 18 chr3:49643152:+ chr3:5170503:+ INFRAME NA TCGA-DU-6396-01A-11R-1708-07 ST3GAL5-IMMT 1 3 chr2:85844396:- chr2:86147833:- INFRAME NA TCGA-DU-6396-01A-11R-1708-07 SYNGR1-TAB1 1000 1000 chr22:39377824:+ chr22:39415006:+ . NA TCGA-DU-6397-01A-11R-1708-07 ATAD2B-SF3B6 2 5 chr2:23869663:- chr2:24067851:- FRAMESHIFT NA TCGA-DU-6397-01A-11R-1708-07 MTERF3-CCDC178 1 7 chr8:96250906:- chr18:32974681:- FRAMESHIFT NA TCGA-DU-6400-01A-12R-1708-07 DLL3-SUPT5H 1000 1000 chr19:39507914:+ chr19:39453356:+ INFRAME NA TCGA-DU-6401-01A-11R-1708-07 GDI2-CPVL 16 35 chr10:5800598:- chr7:29121071:- . NA TCGA-DU-6402-01A-11R-1708-07 ABR-MAN2B1 13 48 chr17:1091665:- chr19:12665805:- INFRAME NA TCGA-DU-6402-01A-11R-1708-07 XRCC6-UBE2D2 3 10 chr22:41637791:+ chr5:139614586:+ FRAMESHIFT NA TCGA-DU-6402-01A-11R-1708-07 EPB41L2-MYLIP 1 4 chr6:131063155:- chr6:16130557:+ . NA TCGA-DU-6403-01A-11R-1708-07 BACH2-MAP3K7 4 22 chr6:90206569:- chr6:90571807:- . NA TCGA-DU-6403-01A-11R-1708-07 FRMD4A-OR13A1 4 7 chr10:14008060:- chr10:45304500:- . NA TCGA-DU-6404-01A-11R-1708-07 EP300-BCOR 31 274 chr22:41177816:+ chrX:40071159:- INFRAME Likely Oncogenic NA TCGA-DU-6404-01A-11R-1708-07 BCOR-EP300 26 130 chrX:40072055:- chr22:41179153:+ . Likely Oncogenic NA TCGA-DU-6404-01A-11R-1708-07 BCOR-L3MBTL2 7 142 chrX:40072349:- chr22:41205251:+ . Likely Oncogenic NA TCGA-DU-6404-01A-11R-1708-07 ABR-YWHAE 1 1 chr17:1228793:- chr17:1345499:- . NA TCGA-DU-6404-01A-11R-1708-07 PACRG-QKI 1 1 chr6:162814281:+ chr6:163561982:+ INFRAME NA TCGA-DU-6406-01A-11R-1708-07 EGFR-SEPT14 820 2270 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-DU-6406-01A-11R-1708-07 SIM2-KCNJ6 8 58 chr21:36699921:+ chr21:37840709:- . NA TCGA-DU-6406-01A-11R-1708-07 DSCR3-NIPBL 7 22 chr21:37267238:- chr5:37019311:+ INFRAME NA TCGA-DU-6406-01A-11R-1708-07 LMBRD2-ERG 3 14 chr5:36108534:- chr21:38380401:- . Likely Oncogenic NA TCGA-DU-6406-01A-11R-1708-07 TTC3-BRWD1 1 21 chr21:37126143:+ chr21:39264685:- INFRAME NA TCGA-DU-6407-01A-13R-1708-07 EGFR-SEPT14 1 1 chr7:55200413:+ chr7:55796092:- INFRAME Likely Oncogenic NA TCGA-DU-6408-01A-11R-1708-07 CREBBP-ENPP7P14 24 90 chr16:3879832:- chr16:5111430:- . Likely Oncogenic NA TCGA-DU-6410-01A-11R-1896-07 CNRIP1-ZNF638 2 1 chr2:68317157:- chr2:71396141:+ FRAMESHIFT NA TCGA-DU-6410-01A-11R-1896-07 NKD1-NOD2 1000 1000 chr16:50632407:+ chr16:50707854:+ . NA TCGA-DU-6542-01A-11R-1896-07 GLG1-CFDP1 7 52 chr16:74606657:- chr16:75294042:- FRAMESHIFT NA TCGA-DU-6542-01A-11R-1896-07 SDE2-CCDC190 5 18 chr1:225999193:- chr1:162859658:- . NA TCGA-DU-6542-01A-11R-1896-07 RYR2-WLS 7 3 chr1:237042569:+ chr1:68194227:- FRAMESHIFT NA TCGA-DU-6542-01A-11R-1896-07 KDM5B-UAP1 3 9 chr1:202808102:- chr1:162566012:+ . NA TCGA-DU-6542-01A-11R-1896-07 NMNAT2-ATF6 2 9 chr1:183418183:- chr1:161778244:+ INFRAME NA TCGA-DU-6542-01A-11R-1896-07 KIF21B-F13B 1 5 chr1:201023343:- chr1:197063057:- FRAMESHIFT NA TCGA-DU-6542-01A-11R-1896-07 TOR1AIP1-FAM20B 1 5 chr1:179914054:+ chr1:179063927:+ INFRAME NA TCGA-DU-7006-01A-11R-2027-07 TIMM9-FCF1 28 192 chr14:58424008:- chr14:74723272:+ . NA TCGA-DU-7006-01A-11R-2027-07 BFAR-SPNS1 11 69 chr16:14655210:+ chr16:28982857:+ INFRAME NA TCGA-DU-7006-01A-11R-2027-07 SUFU-ZCCHC24 5 19 chr10:102550106:+ chr10:79394440:- INFRAME NA TCGA-DU-7006-01A-11R-2027-07 RPS6KA2-MCHR2 5 13 chr6:166858200:- chr6:99956174:- . NA TCGA-DU-7006-01A-11R-2027-07 GNA13-NR3C1 4 11 chr17:65053502:- chr5:143282725:- FRAMESHIFT NA TCGA-DU-7006-01A-11R-2027-07 RGS6-NPAS3 2 14 chr14:72510279:+ chr14:33676211:+ FRAMESHIFT NA TCGA-DU-7006-01A-11R-2027-07 LIFR-PNPLA8 2 3 chr5:38556334:- chr7:108521521:- . NA TCGA-DU-7006-01A-11R-2027-07 ATXN1-HIGD1B 1 3 chr6:16657776:- chr17:44848060:+ . NA TCGA-DU-7006-01A-11R-2027-07 C14orf37-KIAA0586 1000 1000 chr14:58297955:- chr14:58508555:+ . NA TCGA-DU-7007-01A-11R-2027-07 BICD1-SOX5 13 168 chr12:32107544:+ chr12:23665564:- INFRAME NA TCGA-DU-7007-01A-11R-2027-07 TMTC1-CASC1 8 64 chr12:29512043:- chr12:25111939:- INFRAME NA TCGA-DU-7007-01A-11R-2027-07 WNK1-STK38L 5 39 chr12:754324:+ chr12:27302137:+ INFRAME NA TCGA-DU-7007-01A-11R-2027-07 FGD4-CCDC91 3 28 chr12:32502338:+ chr12:28362438:+ . NA TCGA-DU-7007-01A-11R-2027-07 FNDC3A-FGF14-IT1 3 8 chr13:49145935:+ chr13:102294040:- . NA TCGA-DU-7007-01A-11R-2027-07 HAUS2-SNAP23 1 12 chr15:42548965:+ chr15:42545136:+ INFRAME NA TCGA-DU-7007-01A-11R-2027-07 PARP11-ITPR2 1 8 chr12:3821873:- chr12:26725765:- INFRAME NA TCGA-DU-7007-01A-11R-2027-07 CCDC91-TSPAN11 1 4 chr12:28362515:+ chr12:30953981:+ . NA TCGA-DU-7007-01A-11R-2027-07 ERC1-PHC1 1 4 chr12:1236904:+ chr12:8917630:+ . NA TCGA-DU-7007-01A-11R-2027-07 SOX5-MANSC1 1000 1000 chr12:23604387:- chr12:12343414:- . NA TCGA-DU-7008-01A-11R-2027-07 NRXN3-ADCK1 3 5 chr14:78170674:+ chr14:77887091:+ . NA TCGA-DU-7013-01A-11R-2027-07 OS9-KIF5A 11 69 chr12:57694926:+ chr12:57567126:+ INFRAME NA TCGA-DU-7013-01A-11R-2027-07 AVIL-MBD6 4 28 chr12:57814152:- chr12:57527848:+ FRAMESHIFT NA TCGA-DU-7013-01A-11R-2027-07 DCTN2-TSPAN31 1 16 chr12:57532015:- chr12:57743240:+ . NA TCGA-DU-7013-01A-11R-2027-07 CTDSP2-B4GALNT1 1 1 chr12:57846372:- chr12:57632133:- . NA TCGA-DU-7013-01A-11R-2027-07 ARHGEF25-AVIL 1000 1000 chr12:57619379:+ chr12:57816361:- . NA TCGA-DU-7015-01A-11R-2027-07 NUDT3-DDR1 2 9 chr6:34341862:- chr6:30888688:+ INFRAME NA TCGA-DU-7015-01A-11R-2027-07 DGKI-CSMD3 2 6 chr7:137846462:- chr8:112409032:- FRAMESHIFT NA TCGA-DU-7015-01A-11R-2027-07 TRAK1-CADM1 1 10 chr3:42087400:+ chr11:115178775:- . NA TCGA-DU-7015-01A-11R-2027-07 JAM3-SEC13 2 4 chr11:134140770:+ chr3:10305692:- FRAMESHIFT NA TCGA-DU-7292-01A-11R-2027-07 NFASC-ATP2B2 1000 1000 chr1:204988806:+ chr1:203739546:+ . NA TCGA-DU-7298-01A-11R-2027-07 MEGF11-RPL4 4 5 chr15:65980778:- chr15:66503529:- INFRAME NA TCGA-DU-7298-01A-11R-2027-07 SIK2-MEGF11 3 8 chr11:111688162:+ chr15:65982488:- INFRAME NA TCGA-DU-7298-01A-11R-2027-07 TMEM245-SLC44A1 1 7 chr9:109106508:- chr9:105438281:+ FRAMESHIFT NA TCGA-DU-7298-01A-11R-2027-07 PPP2R1B-IDH2 1 5 chr11:111742523:- chr15:90091644:- FRAMESHIFT NA TCGA-DU-7299-01A-21R-2027-07 DHRSX-SYAP1 1 33 chrY:2291502:- chrX:16735227:+ INFRAME NA TCGA-DU-7299-01A-21R-2027-07 SPIDR-KCNB2 2 25 chr8:47294030:+ chr8:72567642:+ . NA TCGA-DU-7299-01A-21R-2027-07 NCAM1-TTC12 1 3 chr11:112961664:+ chr11:113341837:+ FRAMESHIFT NA TCGA-DU-7299-01A-21R-2027-07 PRKX-CLCN4 1 2 chrX:3713088:- chrX:10158289:+ . NA TCGA-DU-7299-01A-21R-2027-07 PPP2R2B-DPYSL3 1 1 chr5:147055665:- chr5:147424963:- FRAMESHIFT NA TCGA-DU-7301-01A-11R-2090-07 FRMPD3-PRPS1 1000 1000 chrX:107576459:+ chrX:107639295:+ FRAMESHIFT NA TCGA-DU-7302-01A-11R-2090-07 CHD8-KIAA1211 6 15 chr14:21456032:- chr4:56179284:+ . NA TCGA-DU-7304-01A-12R-2090-07 RABGAP1L-DGKB 6 25 chr1:174221164:+ chr7:14178151:- INFRAME NA TCGA-DU-7304-01A-12R-2090-07 PTPRZ1-MET 1 20 chr7:121873557:+ chr7:116699071:+ INFRAME Likely Oncogenic NA TCGA-DU-7304-01A-12R-2090-07 TCF12-FOLR1 2 9 chr15:57134500:+ chr11:72192166:+ . NA TCGA-DU-7304-01A-12R-2090-07 CCDC12-SLC38A3 3 2 chr3:46976637:- chr3:50214149:+ . NA TCGA-DU-7306-01A-11R-2090-07 NDUFS7-CNN2 34 4 chr19:1383942:+ chr19:1031071:+ FRAMESHIFT NA TCGA-DU-8158-01A-11R-2256-07 APLP1-CLU 1000 1000 chr19:35879497:+ chr8:27605168:- . NA TCGA-DU-8161-01A-11R-2256-07 AGAP1-IGSF21 13 51 chr2:235750488:+ chr1:18227898:+ INFRAME NA TCGA-DU-8161-01A-11R-2256-07 ATP1A2-CLU 2 14 chr1:160121251:+ chr8:27606524:- INFRAME NA TCGA-DU-8161-01A-11R-2256-07 PER3-CELA2A 3 6 chr1:7785586:+ chr1:15465999:+ INFRAME NA TCGA-DU-8161-01A-11R-2256-07 PER3-CELA2B 3 6 chr1:7785586:+ chr1:15465999:+ . NA TCGA-DU-8162-01A-21R-2256-07 LINC-PINT-SEPT14 1 11 chr7:130984053:- chr7:55819223:- . NA TCGA-DU-8162-01A-21R-2256-07 AUTS2-MKLN1 1 6 chr7:70781756:+ chr7:131375424:+ INFRAME NA TCGA-DU-8163-01A-11R-2256-07 IGFN1-KANK1 10 46 chr1:201222827:+ chr9:734748:+ FRAMESHIFT NA TCGA-DU-8163-01A-11R-2256-07 CRB1-IGFN1 1 27 chr1:197268482:+ chr1:201194154:+ INFRAME NA TCGA-DU-8163-01A-11R-2256-07 KDM4B-CHAF1A 1 14 chr19:5082504:+ chr19:4418020:+ INFRAME NA TCGA-DU-8163-01A-11R-2256-07 KIF21B-ANP32B 1 1 chr1:201023343:- chr9:97994631:+ FRAMESHIFT NA TCGA-DU-8165-01A-11R-2256-07 ORAI2-CUX1 2 4 chr7:102433661:+ chr7:102028098:+ . NA TCGA-DU-8166-01A-11R-2256-07 NOVA2-LEUTX 8 30 chr19:45961010:- chr19:39784527:+ INFRAME NA TCGA-DU-8166-01A-11R-2256-07 RERE-VAMP3 7 25 chr1:8422727:- chr1:7773442:+ FRAMESHIFT NA TCGA-DU-8166-01A-11R-2256-07 SPON1-SIRT3 5 30 chr11:14041654:+ chr11:233215:- INFRAME NA TCGA-DU-8166-01A-11R-2256-07 CALM3-CCDC9 7 21 chr19:46601437:+ chr19:47258330:+ . NA TCGA-DU-8166-01A-11R-2256-07 SYMPK-ELSPBP1 1 3 chr19:45817959:- chr19:48008651:+ . NA TCGA-DU-8167-01A-11R-2256-07 ANKLE2-NCOR2 7 11 chr12:132750643:- chr12:124327633:- INFRAME NA TCGA-DU-8167-01A-11R-2256-07 NCOR2-TMEM132D 5 7 chr12:124400501:- chr12:129531205:- FRAMESHIFT NA TCGA-DU-8167-01A-11R-2256-07 TMEM132D-GALNT9 1 10 chr12:129531059:- chr12:132248027:- INFRAME NA TCGA-DU-8167-01A-11R-2256-07 CCDC94-EBI3 1 8 chr19:4267774:+ chr19:4231191:+ INFRAME NA TCGA-DU-8167-01A-11R-2256-07 TTC3-KCNJ6 1000 1000 chr21:37124742:+ chr21:37625484:- FRAMESHIFT NA TCGA-DU-8168-01A-11R-2256-07 NKD1-NOD2 1000 1000 chr16:50632407:+ chr16:50707854:+ . NA TCGA-DU-A5TP-01A-11R-A28M-07 KNTC1-WASHC3 2 7 chr12:122551696:+ chr12:102039978:- INFRAME NA TCGA-DU-A5TP-01A-11R-A28M-07 SPOP-PRDM16 1 6 chr17:49677933:- chr1:3385152:+ . Likely Oncogenic NA TCGA-DU-A5TT-01A-11R-A28M-07 RAPGEF1-MED27 1 3 chr9:131739770:- chr9:131863140:- FRAMESHIFT NA TCGA-DU-A5TU-01A-11R-A28M-07 UNC79-BRF1 2 9 chr14:93603418:+ chr14:105286376:- INFRAME NA TCGA-DU-A5TW-01A-11R-A28M-07 C3orf70-CLDN11 2 4 chr3:185152628:- chr3:170859983:+ . NA TCGA-DU-A5TY-01A-11R-A28M-07 TBC1D15-BMPER 29 252 chr12:71873003:+ chr7:33937289:+ INFRAME NA TCGA-DU-A5TY-01A-11R-A28M-07 MSRB3-JAZF1 32 86 chr12:65328603:+ chr7:27840867:- FRAMESHIFT NA TCGA-DU-A5TY-01A-11R-A28M-07 SEC61G-IKZF1 10 35 chr7:54757495:- chr7:50368006:+ INFRAME NA TCGA-DU-A5TY-01A-11R-A28M-07 HOXA3-KIAA0895 9 32 chr7:27110726:- chr7:36390027:- . NA TCGA-DU-A5TY-01A-11R-A28M-07 ADCYAP1R1-DFNA5 6 28 chr7:31092735:+ chr7:24710388:- FRAMESHIFT NA TCGA-DU-A5TY-01A-11R-A28M-07 JAZF1-SNX13 7 19 chr7:28180463:- chr7:17891635:- FRAMESHIFT NA TCGA-DU-A5TY-01A-11R-A28M-07 CAND1-DPY19L2P3 4 20 chr12:67269785:+ chr7:29742147:+ . NA TCGA-DU-A5TY-01A-11R-A28M-07 AUTS2-TBC1D30 3 11 chr7:70134571:+ chr12:64827835:+ FRAMESHIFT NA TCGA-DU-A5TY-01A-11R-A28M-07 LRRK2-GXYLT1 2 15 chr12:40225640:+ chr12:42119171:- FRAMESHIFT NA TCGA-DU-A5TY-01A-11R-A28M-07 SEPT14-UPP1 1 14 chr7:55861943:- chr7:48101824:+ INFRAME NA TCGA-DU-A5TY-01A-11R-A28M-07 PTPRR-VWC2 3 4 chr12:70656704:- chr7:49912034:+ FRAMESHIFT NA TCGA-DU-A5TY-01A-11R-A28M-07 RASSF3-SNX10 3 4 chr12:64610743:+ chr7:26346420:+ . NA TCGA-DU-A5TY-01A-11R-A28M-07 CNTN1-PDZRN4 3 3 chr12:40692592:+ chr12:41506456:+ . NA TCGA-DU-A5TY-01A-11R-A28M-07 AVL9-TSPAN31 2 6 chr7:32495802:+ chr12:57745745:+ INFRAME NA TCGA-DU-A5TY-01A-11R-A28M-07 TSPAN31-LANCL2 1 9 chr12:57745217:+ chr7:55428375:+ INFRAME NA TCGA-DU-A5TY-01A-11R-A28M-07 PLEKHA8-PRR15 1 3 chr7:30055342:+ chr7:29566185:+ . NA TCGA-DU-A6S2-01A-21R-A32Q-07 LMF1-CCDC154 1 5 chr16:910931:- chr16:1439126:- INFRAME NA TCGA-DU-A6S7-01A-21R-A32Q-07 ZNF37A-MINDY3 3 3 chr10:38095804:+ chr10:15796172:- . NA TCGA-DU-A76R-01A-11R-A32Q-07 CSNK1D-RNF213 2 2 chr17:82273306:- chr17:80380831:+ FRAMESHIFT NA TCGA-DU-A7T6-01A-11R-A33Z-07 PICALM-PPME1 7 33 chr11:86068651:- chr11:74203728:+ FRAMESHIFT NA TCGA-DU-A7T6-01A-11R-A33Z-07 CAPRIN1-C11orf84 8 25 chr11:34092056:+ chr11:63817805:+ INFRAME NA TCGA-DU-A7T6-01A-11R-A33Z-07 KMT2A-IGHMBP2 2 6 chr11:118512025:+ chr11:68917736:+ FRAMESHIFT Likely Oncogenic NA TCGA-DU-A7T6-01A-11R-A33Z-07 RAB30-CPT1A 2 2 chr11:82987587:- chr11:68815487:- . NA TCGA-DU-A7T8-01A-21R-A34R-07 AGPAT3-PRY 2 5 chr21:43904019:+ chrY:22504209:+ . NA TCGA-DU-A7TA-01A-11R-A33Z-07 ITPR1-BHLHE40 6 15 chr3:4663206:+ chr3:4981392:+ INFRAME NA TCGA-DU-A7TA-01A-11R-A33Z-07 AZIN1-ITPR1 2 8 chr8:102858013:- chr3:4627763:+ . NA TCGA-DU-A7TA-01A-11R-A33Z-07 MAST4-UBE2V2 1 3 chr5:66959294:+ chr8:48043033:+ INFRAME NA TCGA-DU-A7TA-01A-11R-A33Z-07 MB21D2-CEP19 1 3 chr3:192917630:- chr3:196707912:- INFRAME NA TCGA-DU-A7TC-01A-21R-A34R-07 TMC3-C15orf40 9 17 chr15:81338655:- chr15:82992048:- . NA TCGA-DU-A7TC-01A-21R-A34R-07 EIF2AK4-PKM 5 18 chr15:40009730:+ chr15:72210478:- INFRAME NA TCGA-DU-A7TC-01A-21R-A34R-07 TP53BP1-DAPK2 8 5 chr15:43479397:- chr15:63971561:- INFRAME Likely Oncogenic NA TCGA-DU-A7TC-01A-21R-A34R-07 ATP6V1B2-KHDRBS2 6 10 chr8:20212905:+ chr6:61901371:- INFRAME NA TCGA-DU-A7TC-01A-21R-A34R-07 UBE3A-MYO5C 3 18 chr15:25420656:- chr15:52208643:- . NA TCGA-DU-A7TC-01A-21R-A34R-07 VPS39-LYSMD2 3 16 chr15:42199896:- chr15:51724991:- INFRAME NA TCGA-DU-A7TC-01A-21R-A34R-07 TMOD2-C15orf59 3 5 chr15:51782828:+ chr15:73740642:- INFRAME NA TCGA-DU-A7TC-01A-21R-A34R-07 HMBOX1-CLU 2 6 chr8:28890678:+ chr8:27610600:- . NA TCGA-DU-A7TC-01A-21R-A34R-07 TCF12-TMC3 1 10 chr15:57263274:+ chr15:81368328:- INFRAME NA TCGA-DU-A7TD-01A-12R-A34F-07 WDR20-LGALS2 5 54 chr14:102140172:+ chr22:37571931:- INFRAME NA TCGA-DU-A7TD-01A-12R-A34F-07 FAM222B-ALDH6A1 3 14 chr17:28834293:- chr14:74075017:- . NA TCGA-DU-A7TD-01A-12R-A34F-07 NFASC-ATP2B2 1000 1000 chr1:204828782:+ chr1:203698157:+ . NA TCGA-DU-A7TJ-01A-11R-A34R-07 AFTPH-KIAA1841 37 101 chr2:64524612:+ chr2:61115979:+ . NA TCGA-DU-A7TJ-01A-11R-A34R-07 HNRNPLL-SERTAD2 8 17 chr2:38591530:- chr2:64636875:- . NA TCGA-DU-A7TJ-01A-11R-A34R-07 SAMD4A-CGRRF1 8 13 chr14:54568112:+ chr14:54537722:+ INFRAME NA TCGA-DU-A7TJ-01A-11R-A34R-07 TEX261-AAK1 1 10 chr2:70989749:- chr2:69556978:- FRAMESHIFT NA TCGA-E1-5302-01A-01R-1470-07 NUMA1-FOLR1 1 34 chr11:72080458:- chr11:72195271:+ . NA TCGA-E1-5302-01A-01R-1470-07 PLEKHH2-ZBTB1 1 1 chr2:43710575:+ chr14:64521487:+ . NA TCGA-E1-5303-01A-01R-1470-07 MED13L-MYBPC1 7 49 chr12:116006306:- chr12:101667732:+ INFRAME NA TCGA-E1-5303-01A-01R-1470-07 PXN-MYBPC1 5 17 chr12:120265617:- chr12:101648045:+ INFRAME NA TCGA-E1-5303-01A-01R-1470-07 ARMC8-CLDN18 5 7 chr3:138187599:+ chr3:138023658:+ FRAMESHIFT NA TCGA-E1-5303-01A-01R-1470-07 MYBPC1-PXN 2 8 chr12:101663560:+ chr12:120224377:- INFRAME NA TCGA-E1-5304-01A-01R-1470-07 LRP6-NINJ2 92 448 chr12:12179810:- chr12:566178:- INFRAME NA TCGA-E1-5304-01A-01R-1470-07 KCNJ10-CISD2 32 320 chr1:160070022:- chr4:102885216:+ . NA TCGA-E1-5304-01A-01R-1470-07 ANKRD6-ZDHHC14 27 145 chr6:89567096:+ chr6:157628349:+ FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 ARID1B-PREP 14 99 chr6:156829421:+ chr6:105397927:- INFRAME Likely Oncogenic NA TCGA-E1-5304-01A-01R-1470-07 FYTTD1-ALDH1A3 15 47 chr3:197778464:+ chr15:100887572:+ INFRAME NA TCGA-E1-5304-01A-01R-1470-07 ABCA2-TRIM14 15 44 chr9:137028075:- chr9:98100164:- INFRAME NA TCGA-E1-5304-01A-01R-1470-07 MAP3K4-METTL24 10 41 chr6:161049979:+ chr6:110315481:- INFRAME NA TCGA-E1-5304-01A-01R-1470-07 PCYT1B-SIAH1 5 48 chrX:24575130:- chr16:48362430:- FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 ZNF790-RHPN2 8 34 chr19:36838337:- chr19:33044364:- . NA TCGA-E1-5304-01A-01R-1470-07 NCAM2-CYP4F29P 2 49 chr21:20998618:+ chr21:13846141:- . NA TCGA-E1-5304-01A-01R-1470-07 HMGCS1-OXCT1 3 20 chr5:43307766:- chr5:41862750:- . NA TCGA-E1-5304-01A-01R-1470-07 RIMKLB-ITFG2 3 18 chr12:8700614:+ chr12:2817223:+ . NA TCGA-E1-5304-01A-01R-1470-07 CKS2-PCSK5 2 20 chr9:89315297:+ chr9:76174986:+ INFRAME NA TCGA-E1-5304-01A-01R-1470-07 ASCC3-SERINC1 5 7 chr6:100715462:- chr6:122447004:- FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 COPZ1-PPP1R1A 5 3 chr12:54325181:+ chr12:54581050:- INFRAME NA TCGA-E1-5304-01A-01R-1470-07 DDX58-CHRM3 3 6 chr9:32466290:- chr1:239886089:+ . NA TCGA-E1-5304-01A-01R-1470-07 VCP-C9orf131 3 3 chr9:35072337:- chr9:35042861:+ FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 TIMM23-PRKG1 2 6 chr10:45988847:+ chr10:51804585:+ INFRAME NA TCGA-E1-5304-01A-01R-1470-07 MPV17L-XPO6 2 5 chr16:15396207:+ chr16:28113050:- FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 LACE1-ARMC2 1 7 chr6:108477292:+ chr6:108973357:+ FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 PHKB-ERBIN 1 6 chr16:47463993:+ chr5:66012049:+ INFRAME NA TCGA-E1-5304-01A-01R-1470-07 PARK2-AKAP12 1 4 chr6:162727662:- chr6:151305747:+ FRAMESHIFT NA TCGA-E1-5304-01A-01R-1470-07 DSE-PKIB 1 3 chr6:116258967:+ chr6:122585921:+ . NA TCGA-E1-5304-01A-01R-1470-07 WBP1L-ARL3 1 2 chr10:102744143:+ chr10:102705489:- INFRAME NA TCGA-E1-5304-01A-01R-1470-07 ZNF22-ETV1 1 1 chr10:45000978:+ chr7:13909700:- . Likely Oncogenic NA TCGA-E1-5305-01A-01R-1896-07 KCNC3-ZNF530 2 14 chr19:50333469:- chr19:57612503:+ . NA TCGA-E1-5318-01A-01R-1470-07 CENPO-UBXN2A 1 4 chr2:24793965:+ chr2:23958301:+ . NA TCGA-E1-5318-01A-01R-1470-07 APOL2-RAB12 1 1 chr22:36239441:- chr18:8633189:+ FRAMESHIFT NA TCGA-E1-5319-01A-01R-1896-07 GLUL-MBP 1 7 chr1:182387131:- chr18:77017055:- INFRAME NA TCGA-E1-A7YD-01A-11R-A34F-07 TSFM-CYP27B1 110 362 chr12:57787162:+ chr12:57766197:- INFRAME NA TCGA-E1-A7YD-01A-11R-A34F-07 TNS1-SPTBN1 11 10 chr2:217814912:- chr2:54599092:+ INFRAME NA TCGA-E1-A7YD-01A-11R-A34F-07 ECE1-EIF4G3 10 12 chr1:21345376:- chr1:20817538:- INFRAME NA TCGA-E1-A7YD-01A-11R-A34F-07 ZBED6-FIP1L1 5 12 chr1:203818689:+ chr4:53425872:+ FRAMESHIFT NA TCGA-E1-A7YD-01A-11R-A34F-07 ZC3H11A-FIP1L1 5 12 chr1:203818689:+ chr4:53425872:+ FRAMESHIFT NA TCGA-E1-A7YE-01A-11R-A34F-07 POLR3B-TCP11L2 1 3 chr12:106410960:+ chr12:106346286:+ FRAMESHIFT NA TCGA-E1-A7YH-01A-11R-A34F-07 CCDC6-PCBD1 2 7 chr10:59906122:- chr10:70885929:- INFRAME NA TCGA-E1-A7YH-01A-11R-A34F-07 SYMPK-LSM4 2 4 chr19:45863058:- chr19:18316065:- . NA TCGA-E1-A7YI-01A-11R-A34F-07 KIAA1551-MLIP 20 140 chr12:31960871:+ chr6:54230714:+ . NA TCGA-E1-A7YI-01A-11R-A34F-07 SUPT3H-TDRG1 38 67 chr6:45365201:- chr6:40379282:+ . NA TCGA-E1-A7YJ-01A-11R-A34F-07 EGFR-C7orf72 6 13 chr7:55200413:+ chr7:50104314:+ FRAMESHIFT Likely Oncogenic NA TCGA-E1-A7YJ-01A-11R-A34F-07 PI4KA-VPREB3 1 2 chr22:20793193:- chr22:23753198:- FRAMESHIFT NA TCGA-E1-A7YL-01A-11R-A34F-07 ZNF583-CCDC106 198 315 chr19:56414440:+ chr19:55651283:+ INFRAME NA TCGA-E1-A7YL-01A-11R-A34F-07 ZSCAN18-ATP9B 39 42 chr19:58098174:- chr18:79303604:+ . NA TCGA-E1-A7YL-01A-11R-A34F-07 ZNF329-EPG5 20 9 chr19:58150752:- chr18:45952643:- . NA TCGA-E1-A7YL-01A-11R-A34F-07 NRDC-VPS53 11 36 chr1:51792377:- chr17:537176:- INFRAME NA TCGA-E1-A7YL-01A-11R-A34F-07 ZSCAN18-ZNF837 16 8 chr19:58118348:- chr19:58369928:- . NA TCGA-E1-A7YL-01A-11R-A34F-07 ZNF460-HSPD1 6 24 chr19:57280836:+ chr2:197498850:- FRAMESHIFT NA TCGA-E1-A7YL-01A-11R-A34F-07 RNF165-LAIR2 4 11 chr18:46334335:+ chr19:54503700:+ INFRAME NA TCGA-E1-A7YL-01A-11R-A34F-07 RYR3-BUB1B 4 7 chr15:33473538:+ chr15:40165053:+ FRAMESHIFT NA TCGA-E1-A7YL-01A-11R-A34F-07 ZNF460-SYT4 2 13 chr19:57280124:+ chr18:43274394:- . NA TCGA-E1-A7YL-01A-11R-A34F-07 CDK4-AVIL 1 2 chr12:57750923:- chr12:57799920:- INFRAME NA TCGA-E1-A7YN-01A-11R-A34F-07 ATAD1-LIPF 10 31 chr10:87790310:- chr10:88667287:+ INFRAME NA TCGA-E1-A7YN-01A-11R-A34F-07 LIPN-MINPP1 2 8 chr10:88770991:+ chr10:87552082:+ FRAMESHIFT NA TCGA-E1-A7YQ-01A-11R-A34R-07 LANCL2-TTC3 1 2 chr7:55366229:+ chr21:37172595:+ INFRAME NA TCGA-E1-A7YU-01A-11R-A34R-07 ELP6-RBMS3-AS2 8 23 chr3:47510184:- chr3:29615232:- . NA TCGA-E1-A7YU-01A-11R-A34R-07 HKR1-BLVRB 7 23 chr19:37324265:+ chr19:40458545:- . NA TCGA-E1-A7YU-01A-11R-A34R-07 UBP1-MAP4 2 4 chr3:33425590:- chr3:47998879:- . NA TCGA-E1-A7YV-01A-11R-A34R-07 KIF5A-ATP23 2 6 chr12:57550400:+ chr12:57945628:+ FRAMESHIFT NA TCGA-E1-A7YV-01A-11R-A34R-07 MARS-OS9 2 2 chr12:57500522:+ chr12:57715760:+ INFRAME NA TCGA-E1-A7YW-01A-11R-A34R-07 MYT1-ST8SIA1 5 10 chr20:64227971:+ chr12:22354783:- . NA TCGA-E1-A7YW-01A-11R-A34R-07 EI24-FEZ1 1 10 chr11:125572569:+ chr11:125489822:- . NA TCGA-E1-A7Z2-01A-21R-A34R-07 PCID2-SNRPA 54 111 chr13:113208599:- chr19:40759431:+ INFRAME NA TCGA-E1-A7Z2-01A-21R-A34R-07 AKT2-ZNF576 11 34 chr19:40265222:- chr19:43597094:+ . Likely Oncogenic NA TCGA-E1-A7Z2-01A-21R-A34R-07 AKT2-SRRM5 11 30 chr19:40265222:- chr19:43597094:+ . Likely Oncogenic NA TCGA-E1-A7Z2-01A-21R-A34R-07 KPNA6-TMEM39B 11 16 chr1:32108134:+ chr1:32091675:+ FRAMESHIFT NA TCGA-E1-A7Z2-01A-21R-A34R-07 PMS2-DNAH11 7 17 chr7:6008997:- chr7:21773766:+ FRAMESHIFT Likely Oncogenic NA TCGA-E1-A7Z2-01A-21R-A34R-07 RAB40C-PTRH1 4 29 chr16:618260:+ chr9:127695141:- . NA TCGA-E1-A7Z2-01A-21R-A34R-07 MAML2-ATG13 4 15 chr11:96091892:- chr11:46644279:+ . NA TCGA-E1-A7Z2-01A-21R-A34R-07 NUMBL-CYP2F1 3 11 chr19:40686911:- chr19:41120403:+ FRAMESHIFT NA TCGA-E1-A7Z2-01A-21R-A34R-07 ATG16L1-NGEF 4 5 chr2:233293357:+ chr2:232920585:- FRAMESHIFT NA TCGA-E1-A7Z2-01A-21R-A34R-07 EIF2AK1-GLCCI1 3 4 chr7:6024709:- chr7:8084897:+ FRAMESHIFT NA TCGA-E1-A7Z2-01A-21R-A34R-07 DZANK1-RRBP1 2 4 chr20:18412646:- chr20:17643127:- INFRAME NA TCGA-E1-A7Z2-01A-21R-A34R-07 PHF19-IGSF8 1 3 chr9:120877091:- chr1:160095246:- . NA TCGA-E1-A7Z4-01A-11R-A34R-07 LARP1-MAFF 30 98 chr5:154756193:+ chr22:38213823:+ . NA TCGA-FG-5963-01A-11R-1708-07 SMURF1-GJC3 36 97 chr7:99143726:- chr7:99923603:- INFRAME NA TCGA-FG-5963-01A-11R-1708-07 NCKAP5-DYNC2H1 9 21 chr2:133213716:- chr11:103435943:+ INFRAME NA TCGA-FG-5963-01A-11R-1708-07 DTX4-ABTB2 5 26 chr11:59204746:+ chr11:34204689:- INFRAME NA TCGA-FG-5963-01A-11R-1708-07 SOX6-PTPRJ 8 11 chr11:16341012:- chr11:48112747:+ FRAMESHIFT NA TCGA-FG-5963-01A-11R-1708-07 MPPED2-AMOTL1 8 8 chr11:30580246:- chr11:94821530:+ INFRAME NA TCGA-FG-5963-01A-11R-1708-07 DMTF1-SEMA3D 3 14 chr7:87171089:+ chr7:85073081:- INFRAME NA TCGA-FG-5963-01A-11R-1708-07 AMOTL1-CCDC88B 2 17 chr11:94854082:+ chr11:64351476:+ INFRAME NA TCGA-FG-5963-01A-11R-1708-07 GLI3-TMEM243 5 4 chr7:42023468:- chr7:87199057:- INFRAME NA TCGA-FG-5963-01A-11R-1708-07 TMEM135-GPD1L 4 8 chr11:87038186:+ chr3:32128076:+ FRAMESHIFT NA TCGA-FG-5963-01A-11R-1708-07 CKAP5-TMEM135 2 12 chr11:46776255:- chr11:87067694:+ INFRAME NA TCGA-FG-5963-01A-11R-1708-07 GLB1-INSC 2 9 chr3:33068230:- chr11:15238919:+ INFRAME NA TCGA-FG-5963-01A-11R-1708-07 FGF12-LAMP3 2 8 chr3:192727181:- chr3:183154391:- INFRAME NA TCGA-FG-5963-01A-11R-1708-07 HARBI1-TNS3 1 9 chr11:46615568:- chr7:47305003:- INFRAME NA TCGA-FG-5963-01A-11R-1708-07 SMURF1-TRIM4 2 4 chr7:99143726:- chr7:99909660:- FRAMESHIFT NA TCGA-FG-5963-01A-11R-1708-07 CELF1-BBOX1 1 5 chr11:47565274:- chr11:27119649:+ . NA TCGA-FG-5963-01A-11R-1708-07 UBE2E2-SEMA3A 1 2 chr3:23217312:+ chr7:84014351:- FRAMESHIFT NA TCGA-FG-6688-01A-11R-1896-07 NFASC-PPP1R12B 11 54 chr1:204988806:+ chr1:202562778:+ FRAMESHIFT NA TCGA-FG-6691-01A-11R-1896-07 ATF7IP-CCNY 1 14 chr12:14385400:+ chr10:35483404:+ FRAMESHIFT NA TCGA-FG-6692-01A-11R-1896-07 HP1BP3-TMCO4 5 32 chr1:20779812:- chr1:19737456:- FRAMESHIFT NA TCGA-FG-6692-01A-11R-1896-07 NPM1-VIM 1 1 chr5:171388006:+ chr10:17236294:+ INFRAME Likely Oncogenic NA TCGA-FG-7636-01A-11R-2090-07 FARS2-GCNT2 1 7 chr6:5613320:+ chr6:10621351:+ FRAMESHIFT NA TCGA-FG-7643-01A-11R-2090-07 MINDY1-TBKBP1 2 3 chr1:151006312:- chr17:47696079:+ . NA TCGA-FG-8185-01A-11R-2256-07 RIMKLB-PIP4K2A 10 25 chr12:8698297:+ chr10:22609717:- FRAMESHIFT NA TCGA-FG-8185-01A-11R-2256-07 PLCB1-DTD1 3 12 chr20:8790261:+ chr20:18628127:+ FRAMESHIFT NA TCGA-FG-8185-01A-11R-2256-07 FAM171A1-ANKRD26 1 7 chr10:15370956:- chr10:27029356:- FRAMESHIFT NA TCGA-FG-8185-01A-11R-2256-07 NAXE-HAPLN2 1000 1000 chr1:156593555:+ chr1:156623467:+ . NA TCGA-FG-8187-01A-11R-2256-07 HCN2-BSG 2 36 chr19:590577:+ chr19:579500:+ FRAMESHIFT NA TCGA-FG-8189-01B-11R-A28M-07 PAMR1-SLC1A2 1000 1000 chr11:35431989:- chr11:35317516:- . NA TCGA-FG-A4MT-01A-11R-A26U-07 MALRD1-DTD2 1 4 chr10:19531351:+ chr14:31448454:- FRAMESHIFT NA TCGA-FG-A4MU-01B-11R-A28M-07 BTBD2-OAS2 29 140 chr19:1993020:- chr12:112987038:+ INFRAME NA TCGA-FG-A4MU-01B-11R-A28M-07 SEC61G-GLUL 3 10 chr7:54759158:- chr1:182388750:- . NA TCGA-FG-A4MW-01A-11R-A26U-07 ATF1-CHIT1 6 16 chr12:50764307:+ chr1:203213045:- . NA TCGA-FG-A4MY-01A-11R-A26U-07 SHC2-R3HDM4 3 17 chr19:430684:- chr19:902130:- INFRAME NA TCGA-FG-A60L-01A-12R-A31N-07 NDEL1-CHD3 3 29 chr17:8448686:+ chr17:7910847:+ INFRAME NA TCGA-FG-A70Z-01A-12R-A33Z-07 MINPP1-CFL1P1 17 15 chr10:87513221:+ chr10:87843810:+ . NA TCGA-FG-A70Z-01A-12R-A33Z-07 ATAD1-ANKRD22 3 16 chr10:87790310:- chr10:88823378:- FRAMESHIFT NA TCGA-FG-A70Z-01A-12R-A33Z-07 CTDSP2-GLI1 2 4 chr12:57846372:- chr12:57463665:+ . NA TCGA-FG-A70Z-01A-12R-A33Z-07 USP15-CPSF6 1 7 chr12:62260503:+ chr12:69251129:+ INFRAME NA TCGA-FG-A70Z-01A-12R-A33Z-07 NLK-ELMO1 1 4 chr17:28122732:+ chr7:37133234:- INFRAME NA TCGA-FG-A70Z-01A-12R-A33Z-07 METTL21B-INHBC 1 2 chr12:57773128:+ chr12:57449277:+ INFRAME NA TCGA-FG-A710-01A-12R-A33Z-07 MED16-PALM 3 19 chr19:893086:- chr19:746285:+ . NA TCGA-FG-A711-01A-21R-A33Z-07 RASA3-KCNG2 13 28 chr13:114052052:- chr18:79899040:+ FRAMESHIFT NA TCGA-FG-A711-01A-21R-A33Z-07 RBFA-XRCC5 4 7 chr18:80042219:+ chr2:216190225:+ FRAMESHIFT NA TCGA-FG-A87N-01A-11R-A36H-07 MLLT3-PALM2 2 7 chr9:20620654:- chr9:109867491:+ FRAMESHIFT NA TCGA-FG-A87N-01A-11R-A36H-07 PALM2-MLLT3 1 8 chr9:109780533:+ chr9:20456786:- FRAMESHIFT NA TCGA-FG-A87N-01A-11R-A36H-07 SLC35G1-SLIT1 1 3 chr10:93894160:+ chr10:97066086:- FRAMESHIFT NA TCGA-FG-A87Q-01A-11R-A36H-07 MAP3K3-TANC2 4 5 chr17:63667060:+ chr17:63388635:+ FRAMESHIFT NA TCGA-FG-A87Q-01A-11R-A36H-07 TANC2-WFDC21P 1 8 chr17:63389544:+ chr17:60085203:- . NA TCGA-FG-A87Q-01A-11R-A36H-07 TANC2-TMEM104 1 5 chr17:63074014:+ chr17:74785482:+ INFRAME NA TCGA-FG-A87Q-01A-11R-A36H-07 BCAS3-TACO1 1 3 chr17:61084564:+ chr17:63604534:+ INFRAME NA TCGA-FN-7833-01A-11R-2090-07 HPSE2-CWF19L1 1 5 chr10:99144238:- chr10:100243777:- INFRAME NA TCGA-HT-7470-01A-12R-2090-07 WDR49-VEPH1 3 13 chr3:167560064:- chr3:157381376:- INFRAME NA TCGA-HT-7470-01A-12R-2090-07 DIAPH2-F8 1 9 chrX:96758258:+ chrX:154837752:- INFRAME NA TCGA-HT-7470-01A-12R-2090-07 NLGN1-SERPINI1 2 4 chr3:173807832:+ chr3:167807244:+ INFRAME NA TCGA-HT-7470-01A-12R-2090-07 THSD7A-PRKAR1B 1 3 chr7:11417450:- chr7:551470:- INFRAME NA TCGA-HT-7472-01A-11R-2027-07 LARGE1-CRKL 1 10 chr22:33564848:- chr22:20933779:+ FRAMESHIFT NA TCGA-HT-7475-01A-11R-2027-07 BTBD2-LINGO3 3 16 chr19:2015297:- chr19:2291822:- . NA TCGA-HT-7475-01A-11R-2027-07 BOP1-NIPAL2 2 8 chr8:144291272:- chr8:98222600:- FRAMESHIFT NA TCGA-HT-7477-01B-11R-A28M-07 CHD2-CSNK1G1 41 33 chr15:92949043:+ chr15:64181219:- . NA TCGA-HT-7477-01B-11R-A28M-07 PBRM1-KYNU 21 97 chr3:52658199:- chr2:142985084:+ INFRAME Likely Oncogenic NA TCGA-HT-7477-01B-11R-A28M-07 ZNF804A-IRF2 20 97 chr2:184599070:+ chr4:184429070:- . NA TCGA-HT-7477-01B-11R-A28M-07 THRB-NECTIN3 1 35 chr3:24297226:- chr3:111112030:+ . NA TCGA-HT-7477-01B-11R-A28M-07 MIER3-PDE4D 9 1 chr5:56950628:- chr5:59193536:- FRAMESHIFT NA TCGA-HT-7477-01B-11R-A28M-07 ITGA4-UBE2E2 5 6 chr2:181458317:+ chr3:23499608:+ FRAMESHIFT NA TCGA-HT-7477-01B-11R-A28M-07 RBMS3-NMNAT3 3 12 chr3:29183129:+ chr3:139627761:- . NA TCGA-HT-7477-01B-11R-A28M-07 SCFD2-SPINK2 1 9 chr4:53145333:- chr4:56820579:- INFRAME NA TCGA-HT-7477-01B-11R-A28M-07 SLC25A51-DCN 1 9 chr9:37899829:- chr12:91164717:- . NA TCGA-HT-7477-01B-11R-A28M-07 MAGI2-VWC2 1 5 chr7:79453020:- chr7:49802711:+ FRAMESHIFT NA TCGA-HT-7477-01B-11R-A28M-07 DNAJA1-GALNTL6 1 4 chr9:33030667:+ chr4:173009178:+ FRAMESHIFT NA TCGA-HT-7479-01A-11R-2027-07 RPL38-BCAS3 4 15 chr17:74204190:+ chr17:60902620:+ FRAMESHIFT NA TCGA-HT-7479-01A-11R-2027-07 PPM1D-NUP85 1 8 chr17:60648082:+ chr17:75225103:+ INFRAME NA TCGA-HT-7483-01A-11R-2027-07 ERCC6L2-GTF3C4 3 17 chr9:95941549:+ chr9:132677977:+ FRAMESHIFT NA TCGA-HT-7483-01A-11R-2027-07 RAPGEF1-SEC16A 3 4 chr9:131739770:- chr9:136477684:- . NA TCGA-HT-7483-01A-11R-2027-07 UBR1-STARD9 3 4 chr15:42970520:- chr15:42634856:+ FRAMESHIFT NA TCGA-HT-7483-01A-11R-2027-07 DLEU2-ATE1 2 6 chr13:50075559:- chr10:121743858:- . NA TCGA-HT-7603-01A-21R-2090-07 SYNJ1-PDE9A 6 17 chr21:32726772:- chr21:42743776:+ INFRAME NA TCGA-HT-7603-01A-21R-2090-07 PDE9A-DHRS7 2 14 chr21:42733426:+ chr14:60156152:- INFRAME NA TCGA-HT-7604-01A-11R-2090-07 ZNF136-NFIX 41 88 chr19:12163206:+ chr19:13025021:+ INFRAME NA TCGA-HT-7604-01A-11R-2090-07 RANBP9-BLOC1S5 5 23 chr6:13696785:- chr6:8015828:- INFRAME NA TCGA-HT-7604-01A-11R-2090-07 RANBP9-TXNDC5 3 5 chr6:13696785:- chr6:7904723:- INFRAME NA TCGA-HT-7611-01A-11R-2403-07 HCFC2-ANKS1B 2 7 chr12:104098480:+ chr12:99246864:- FRAMESHIFT NA TCGA-HT-7680-01A-11R-2256-07 NDRG2-SPARC 1 8 chr14:21018763:- chr5:151669784:- INFRAME NA TCGA-HT-7686-01A-11R-2256-07 SNX15-MAJIN 36 106 chr11:65027636:+ chr11:64940646:- INFRAME NA TCGA-HT-7686-01A-11R-2256-07 MICAL3-FXYD6 11 143 chr22:18001393:- chr11:117842781:- . NA TCGA-HT-7686-01A-11R-2256-07 TNRC6B-SLC35F2 17 110 chr22:40178140:+ chr11:107815965:- INFRAME NA TCGA-HT-7686-01A-11R-2256-07 PCNX3-C11orf80 3 46 chr11:65630604:+ chr11:66842849:+ FRAMESHIFT NA TCGA-HT-7686-01A-11R-2256-07 PCNX3-RCE1 3 46 chr11:65630604:+ chr11:66842849:+ . NA TCGA-HT-7686-01A-11R-2256-07 EWSR1-NCAPH2 4 35 chr22:29282557:+ chr22:50516447:+ FRAMESHIFT Likely Oncogenic NA TCGA-HT-7686-01A-11R-2256-07 FXYD6-OSBP2 4 26 chr11:117876592:- chr22:30870429:+ . NA TCGA-HT-7686-01A-11R-2256-07 EHD1-GRK3 4 12 chr11:64859924:- chr22:25661576:+ INFRAME NA TCGA-HT-7686-01A-11R-2256-07 MN1-MIR100HG 2 14 chr22:27796763:- chr11:122091719:- . NA TCGA-HT-7686-01A-11R-2256-07 C22orf39-ZBTB16 3 6 chr22:19396787:- chr11:114156337:+ . NA TCGA-HT-7686-01A-11R-2256-07 HIRA-ZBTB16 3 6 chr22:19396787:- chr11:114156337:+ FRAMESHIFT NA TCGA-HT-7686-01A-11R-2256-07 RSF1-KLC2 2 5 chr11:77820528:- chr11:66262814:+ INFRAME NA TCGA-HT-7686-01A-11R-2256-07 DDX6-TSPAN18 1 8 chr11:118757171:- chr11:44906407:+ FRAMESHIFT NA TCGA-HT-7686-01A-11R-2256-07 TOP3B-GRAMD1B 1 3 chr22:21960321:- chr11:123480816:+ FRAMESHIFT NA TCGA-HT-7689-01A-11R-2256-07 QKI-AKAP7 2 32 chr6:163562069:+ chr6:131282399:+ INFRAME NA TCGA-HT-7689-01A-11R-2256-07 VKORC1-SGF29 2 21 chr16:31094557:- chr16:28581055:+ . NA TCGA-HT-7689-01A-11R-2256-07 SPNS1-ZNF668 1 11 chr16:28978044:+ chr16:31064481:- FRAMESHIFT NA TCGA-HT-7689-01A-11R-2256-07 FAM156A-XAGE2 1 3 chrX:52995306:- chrX:52370007:+ . NA TCGA-HT-7689-01A-11R-2256-07 PTGDS-INF2 1 2 chr9:136977692:+ chr14:104718795:+ FRAMESHIFT NA TCGA-HT-7690-01A-11R-2256-07 ITPR2-ADIPOR2 17 26 chr12:26790157:- chr12:1772842:+ FRAMESHIFT NA TCGA-HT-7690-01A-11R-2256-07 ZNF33A-PARD3 2 4 chr10:38017386:+ chr10:34269899:- FRAMESHIFT NA TCGA-HT-7690-01A-11R-2256-07 NRP1-CUL2 1 6 chr10:33330708:- chr10:35010442:- FRAMESHIFT NA TCGA-HT-7693-01A-11R-2256-07 ABR-YWHAE 63 341 chr17:1079330:- chr17:1365058:- INFRAME NA TCGA-HT-7695-01A-11R-2256-07 NEXN-GIPC2 1 10 chr1:77888759:+ chr1:78119393:+ . NA TCGA-HT-7695-01A-11R-2256-07 DHX30-MAP4 1 1 chr3:47829134:+ chr3:47872100:- INFRAME NA TCGA-HT-7854-01A-11R-2256-07 NCOR2-GATA4 186 935 chr12:124378237:- chr8:11748919:+ INFRAME NA TCGA-HT-7854-01A-11R-2256-07 PAMR1-SLC1A2 1 3 chr11:35439627:- chr11:35317516:- INFRAME NA TCGA-HT-7857-01A-11R-2403-07 VPS9D1-ZNF827 5 12 chr16:89720763:- chr4:145779511:- FRAMESHIFT NA TCGA-HT-7857-01A-11R-2403-07 MAP9-TAT 2 8 chr4:155360168:- chr16:71576427:- . NA TCGA-HT-7858-01A-11R-2403-07 CNBP-ALDH1L1 5 40 chr3:129183776:- chr3:126112880:- . NA TCGA-HT-7860-01A-11R-2403-07 CREBRF-CSNK1A1 2 17 chr5:173056479:+ chr5:149520388:- . NA TCGA-HT-7860-01A-11R-2403-07 HDAC1-LRRC42 1 9 chr1:32292218:+ chr1:53951986:+ . NA TCGA-HT-7873-01B-11R-2403-07 CCDC91-FAR2 17 65 chr12:28259442:+ chr12:29270412:+ . NA TCGA-HT-7873-01B-11R-2403-07 PAPSS2-ATAD1 11 29 chr10:87715843:+ chr10:87814612:- . NA TCGA-HT-7873-01B-11R-2403-07 GPSM1-NUP214 3 21 chr9:136358209:+ chr9:131127524:+ FRAMESHIFT NA TCGA-HT-7873-01B-11R-2403-07 CDK5RAP2-GRIN1 3 8 chr9:120518427:- chr9:137142013:+ INFRAME NA TCGA-HT-7873-01B-11R-2403-07 KIAA1161-KIF24 1000 1000 chr9:34370433:- chr9:34329200:- . NA TCGA-HT-7875-01A-11R-2403-07 WDR20-TECPR2 1 15 chr14:102140172:+ chr14:102496979:+ INFRAME NA TCGA-HT-7882-01A-11R-2403-07 GLIS3-PUM3 3 27 chr9:4286038:- chr9:2838517:- . NA TCGA-HT-7902-01A-12R-2403-07 UBR1-TTBK2 6 15 chr15:42966153:- chr15:42840433:- INFRAME NA TCGA-HT-8010-01A-11R-2403-07 ZNF146-KMT2B 1 11 chr19:36215196:+ chr19:35722359:+ . Inconclusive NA TCGA-HT-8011-01A-11R-2403-07 NUAK2-CYB5R1 4 17 chr1:205321398:- chr1:202966898:- INFRAME NA TCGA-HT-8011-01A-11R-2403-07 ADAM10-ZNF770 1 11 chr15:58749480:- chr15:34987673:- . NA TCGA-HT-8013-01A-11R-2403-07 ATP6V0A1-NBR1 3 3 chr17:42507627:+ chr17:43186250:+ INFRAME NA TCGA-HT-8015-01B-11R-A28M-07 DSCAML1-MPZL2 1 4 chr11:117776791:- chr11:118263097:- INFRAME NA TCGA-HT-8018-01A-11R-2404-07 HIP1R-KCNMB4 1 2 chr12:122848608:+ chr12:70400209:+ INFRAME NA TCGA-HT-8104-01A-11R-2404-07 SWAP70-ZNF143 5 49 chr11:9732710:+ chr11:9494646:+ INFRAME NA TCGA-HT-8104-01A-11R-2404-07 ANK2-ALPK1 10 13 chr4:112904514:+ chr4:112429149:+ INFRAME NA TCGA-HT-8104-01A-11R-2404-07 NUP93-GNAO1 8 21 chr16:56758655:+ chr16:56275931:+ FRAMESHIFT NA TCGA-HT-8104-01A-11R-2404-07 SBF2-CALM3 5 12 chr11:10193902:- chr19:46605827:+ INFRAME NA TCGA-HT-8104-01A-11R-2404-07 PLEKHA6-MT3 1 26 chr1:204359694:- chr16:56590840:+ . NA TCGA-HT-8106-01A-11R-2404-07 NCALD-LAPTM4B 4 31 chr8:101915809:- chr8:97805353:+ . NA TCGA-HT-8106-01A-11R-2404-07 COLEC12-CLUL1 1 12 chr18:480707:- chr18:606978:+ . NA TCGA-HT-8108-01A-11R-2404-07 CNST-RGS7 3 23 chr1:246648037:+ chr1:240827172:- INFRAME NA TCGA-HT-8111-01A-11R-2404-07 ATF2-TECR 2 4 chr2:175168050:- chr19:14562525:+ . NA TCGA-HT-8114-01A-11R-2404-07 PACRG-QKI 1 4 chr6:162814281:+ chr6:163478780:+ INFRAME NA TCGA-HT-8114-01A-11R-2404-07 NUDT22-VPS51 1 1 chr11:64227132:+ chr11:65109280:+ INFRAME NA TCGA-HT-8563-01A-11R-2404-07 LRP4-PRDM11 2 9 chr11:46873100:- chr11:45204711:+ FRAMESHIFT NA TCGA-HT-8564-01A-11R-2404-07 TMEM150C-SCD5 14 46 chr4:82561906:- chr4:82705413:- . NA TCGA-HT-A5RA-01A-11R-A28M-07 BDH1-ZBBX 13 40 chr3:197522640:- chr3:167242643:- INFRAME NA TCGA-HT-A5RA-01A-11R-A28M-07 NEK11-BDH1 10 35 chr3:131170887:+ chr3:197514416:- INFRAME NA TCGA-HT-A5RA-01A-11R-A28M-07 ISY1-MASP1 4 34 chr3:129156633:- chr3:187286056:- FRAMESHIFT NA TCGA-HT-A5RA-01A-11R-A28M-07 MKRN1-DENND2A 5 25 chr7:140456652:- chr7:140519718:- FRAMESHIFT NA TCGA-HT-A5RA-01A-11R-A28M-07 SDHAP1-CPNE4 6 6 chr3:195971323:- chr3:131685958:- . NA TCGA-HT-A5RA-01A-11R-A28M-07 SENP2-LIPH 1 23 chr3:185624082:+ chr3:185508877:- INFRAME NA TCGA-HT-A5RA-01A-11R-A28M-07 MTOR-CR1 3 11 chr1:11228668:- chr1:207511569:+ FRAMESHIFT NA TCGA-HT-A5RA-01A-11R-A28M-07 MTOR-CR1L 1000 1000 chr1:11228668:- chr1:207683872:+ FRAMESHIFT NA TCGA-HT-A5RC-01A-11R-A28M-07 SASH1-AFDN 9 31 chr6:148519893:+ chr6:167943129:+ INFRAME NA TCGA-HT-A5RC-01A-11R-A28M-07 SCRIB-NRBP2 4 40 chr8:143815214:- chr8:143840229:- INFRAME NA TCGA-HT-A5RC-01A-11R-A28M-07 PIAS4-ZFR2 4 30 chr19:4013349:+ chr19:3823403:- INFRAME NA TCGA-HT-A5RC-01A-11R-A28M-07 UBFD1-TMEM159 3 27 chr16:23559676:+ chr16:21161085:+ . NA TCGA-HT-A5RC-01A-11R-A28M-07 GGA2-PRKCB 2 27 chr16:23491677:- chr16:23988508:+ INFRAME NA TCGA-HT-A5RC-01A-11R-A28M-07 AFDN-SASH1 2 21 chr6:167880517:+ chr6:148390134:+ INFRAME NA TCGA-HT-A614-01A-11R-A29R-07 THBS4-PHAX 1 24 chr5:79991412:+ chr5:126624575:+ . NA TCGA-HT-A614-01A-11R-A29R-07 PRR16-SCAMP1 2 10 chr5:120464645:+ chr5:78415520:+ INFRAME NA TCGA-HT-A614-01A-11R-A29R-07 MSH3-RASGEF1C 2 6 chr5:80656531:+ chr5:180128610:- FRAMESHIFT Likely Oncogenic NA TCGA-HT-A614-01A-11R-A29R-07 LHFPL2-CSNK1A1 1 9 chr5:78564813:- chr5:149525171:- . NA TCGA-HT-A614-01A-11R-A29R-07 MAPK6-SCAMP2 1 5 chr15:52019376:+ chr15:74854649:- . NA TCGA-HT-A614-01A-11R-A29R-07 MARCH3-SRFBP1 1 3 chr5:127030350:- chr5:121974196:+ . NA TCGA-HT-A617-01A-11R-A29R-07 SLC47A2-ALDH3A1 14 60 chr17:19712703:- chr17:19743463:- INFRAME NA TCGA-HT-A617-01A-11R-A29R-07 EPHB1-BFSP2 5 28 chr3:135154276:+ chr3:133447317:+ INFRAME NA TCGA-HT-A61C-01A-11R-A29R-07 WNT2-ASZ1 31 249 chr7:117322907:- chr7:117426935:- FRAMESHIFT NA TCGA-HT-A61C-01A-11R-A29R-07 ST7-CFTR 24 165 chr7:116953691:+ chr7:117559464:+ FRAMESHIFT NA TCGA-HT-A61C-01A-11R-A29R-07 MET-ST7-AS2 15 154 chr7:116731859:+ chr7:117112667:- . NA TCGA-HT-A61C-01A-11R-A29R-07 WNT2-ST7 1000 1000 chr7:117297612:- chr7:117099762:+ INFRAME NA TCGA-HT-A61C-01A-11R-A29R-07 ASZ1-WNT2 1000 1000 chr7:117420163:- chr7:117320793:- INFRAME NA TCGA-HT-A74H-01A-11R-A32Q-07 ZNRF3-CRYBB2 9 50 chr22:28884066:+ chr22:25221404:+ . NA TCGA-HT-A74H-01A-11R-A32Q-07 TTC28-FAM19A5 2 3 chr22:28629552:- chr22:48646597:+ FRAMESHIFT NA TCGA-HT-A74J-01A-12R-A32Q-07 NELFB-EXD3 9 35 chr9:137257054:+ chr9:137324143:- INFRAME NA TCGA-HW-7490-01A-11R-2027-07 PFKL-AIRE 6 3 chr21:44300190:+ chr21:44297656:+ FRAMESHIFT NA TCGA-HW-8321-01A-11R-2404-07 HYOU1-NLRX1 4 19 chr11:119045127:- chr11:119171356:+ . NA TCGA-HW-8321-01A-11R-2404-07 WDR45B-OGFOD3 3 7 chr17:82643949:- chr17:82415627:- FRAMESHIFT NA TCGA-HW-8321-01A-11R-2404-07 OGFOD3-WDR45B 2 10 chr17:82411455:- chr17:82627291:- FRAMESHIFT NA TCGA-HW-8322-01A-11R-2404-07 NKD1-NOD2 1000 1000 chr16:50632407:+ chr16:50707854:+ . NA TCGA-HW-A5KK-01A-11R-A27Q-07 SUMF2-SEPT14 17 141 chr7:56079608:+ chr7:55819223:- INFRAME NA TCGA-HW-A5KK-01A-11R-A27Q-07 TRPS1-DEPTOR 13 47 chr8:115668545:- chr8:120049576:+ . NA TCGA-HW-A5KK-01A-11R-A27Q-07 ADGRB1-EXT1 3 14 chr8:142511073:+ chr8:117822597:- INFRAME NA TCGA-HW-A5KL-01A-11R-A27Q-07 CORO1C-ZNF664 8 49 chr12:108731429:- chr12:124011381:+ . NA TCGA-HW-A5KL-01A-11R-A27Q-07 CORO1C-RFLNA 2 14 chr12:108731429:- chr12:124149595:+ . NA TCGA-HW-A5KL-01A-11R-A27Q-07 SFSWAP-MYO1H 1 5 chr12:131766308:+ chr12:109407794:+ INFRAME NA TCGA-IK-7675-01A-11R-2090-07 CTDSP2-COL15A1 24 44 chr12:57846372:- chr9:98996934:+ FRAMESHIFT NA TCGA-IK-7675-01A-11R-2090-07 DIP2B-RTTN 4 20 chr12:50708562:+ chr18:70128546:- FRAMESHIFT NA TCGA-IK-7675-01A-11R-2090-07 TOPORS-ADAMTSL1 1 17 chr9:32550774:- chr9:18826284:+ FRAMESHIFT NA TCGA-KT-A7W1-01A-11R-A34F-07 EPHB2-PDZD4 6 29 chr1:22785076:+ chrX:153808595:- FRAMESHIFT NA TCGA-KT-A7W1-01A-11R-A34F-07 KIF26B-FMN2 5 29 chr1:245688807:+ chr1:240123179:+ INFRAME NA TCGA-KT-A7W1-01A-11R-A34F-07 CREBBP-GOLGA6L2 9 3 chr16:3850297:- chr15:23445438:- INFRAME Likely Oncogenic NA TCGA-KT-A7W1-01A-11R-A34F-07 RAP1GAP-NSDHL 5 18 chr1:21649761:- chrX:152858770:+ FRAMESHIFT NA TCGA-KT-A7W1-01A-11R-A34F-07 CNST-RAP1GAP 2 25 chr1:246566663:+ chr1:21626397:- . NA TCGA-KT-A7W1-01A-11R-A34F-07 ADCY9-VASN 1 8 chr16:4113750:- chr16:4380869:+ . NA TCGA-P5-A5EU-01A-11R-A27Q-07 ZNF846-NFIX 22 137 chr19:9785938:- chr19:13073047:+ . NA TCGA-P5-A5EU-01A-11R-A27Q-07 LRP3-VAV1 4 10 chr19:33196777:+ chr19:6820702:+ FRAMESHIFT NA TCGA-P5-A5EU-01A-11R-A27Q-07 TSHZ3-CEACAM7 4 6 chr19:31349180:- chr19:41677503:- INFRAME NA TCGA-P5-A5EU-01A-11R-A27Q-07 INPP5A-AFAP1L2 4 2 chr10:132538171:+ chr10:114340731:- FRAMESHIFT NA TCGA-P5-A5EU-01A-11R-A27Q-07 AKT2-UPF1 2 7 chr19:40285181:- chr19:18845980:+ . Likely Oncogenic NA TCGA-P5-A5EU-01A-11R-A27Q-07 VWA2-IDE 2 3 chr10:114282571:+ chr10:92537550:- FRAMESHIFT NA TCGA-P5-A5EU-01A-11R-A27Q-07 PTPRS-POU2F2 1 5 chr19:5340664:- chr19:42122576:- . NA TCGA-P5-A5EU-01A-11R-A27Q-07 ISPD-MEOX2 1 3 chr7:16216066:- chr7:15626918:- FRAMESHIFT NA TCGA-P5-A5EV-01A-11R-A27Q-07 MAPT-HOXB-AS3 54 514 chr17:46018730:+ chr17:48600447:+ . NA TCGA-P5-A5EV-01A-11R-A27Q-07 PSMD3-UNC45B 14 18 chr17:39986712:+ chr17:35171322:+ INFRAME NA TCGA-P5-A5EZ-01A-11R-A27Q-07 TBC1D19-ADGRA3 6 13 chr4:26584292:+ chr4:22346823:- FRAMESHIFT NA TCGA-P5-A5EZ-01A-11R-A27Q-07 CTBP1-FAM193A 3 22 chr4:1238183:- chr4:2625262:+ INFRAME NA TCGA-P5-A5EZ-01A-11R-A27Q-07 CTBP1-RNF4 3 12 chr4:1238183:- chr4:2625262:+ . NA TCGA-P5-A5F2-01A-11R-A28M-07 PPM1A-COQ8B 1 9 chr14:60249677:+ chr19:40714397:- . NA TCGA-P5-A72U-01A-31R-A32Q-07 GIGYF2-NGEF 33 90 chr2:232819985:+ chr2:232894916:- INFRAME NA TCGA-P5-A72U-01A-31R-A32Q-07 DCTN2-DENND3 6 59 chr12:57532015:- chr8:141150834:+ INFRAME NA TCGA-P5-A72U-01A-31R-A32Q-07 CHCHD3-C7orf73 10 18 chr7:133024546:- chr7:135672753:+ FRAMESHIFT NA TCGA-P5-A72U-01A-31R-A32Q-07 CHCHD3-NUP205 6 14 chr7:133024546:- chr7:135648404:+ FRAMESHIFT NA TCGA-P5-A733-01A-11R-A32Q-07 BBX-DGKG 1 4 chr3:107526398:+ chr3:186320707:- . NA TCGA-P5-A77W-01A-11R-A32Q-07 LRFN5-DPF3 1 3 chr14:41608562:+ chr14:72771893:- . NA TCGA-P5-A77X-01A-11R-A32Q-07 ZNF676-KANK3 78 109 chr19:22193016:- chr19:8325096:- INFRAME NA TCGA-QH-A65X-01A-11R-A32Q-07 DCAKD-C1QL1 1000 1000 chr17:45024311:- chr17:44960293:- . NA TCGA-QH-A6CS-01A-11R-A31N-07 CLU-PEBP1 1 5 chr8:27599780:- chr12:118138039:+ INFRAME NA TCGA-QH-A6CV-01A-11R-A31N-07 NPNT-GSTCD 22 98 chr4:105898001:+ chr4:105822954:+ INFRAME NA TCGA-QH-A6CV-01A-11R-A31N-07 PRRC2B-NR1H3 16 85 chr9:131444328:+ chr11:47261241:+ INFRAME NA TCGA-QH-A6CV-01A-11R-A31N-07 SPOP-NBPF1 14 19 chr17:49611280:- chr1:16564186:- FRAMESHIFT Likely Oncogenic NA TCGA-QH-A6CV-01A-11R-A31N-07 GNAI3-GPR61 5 16 chr1:109548838:+ chr1:109545311:+ . NA TCGA-QH-A6CV-01A-11R-A31N-07 TRAF4-FASN 4 17 chr17:28744255:+ chr17:82080922:- INFRAME NA TCGA-QH-A6CV-01A-11R-A31N-07 ABI2-HEXIM2 2 13 chr2:203367044:+ chr17:45162750:+ INFRAME NA TCGA-QH-A6CW-01A-11R-A32Q-07 RTKN-M1AP 5 67 chr2:74439551:- chr2:74607223:- INFRAME NA TCGA-QH-A6CX-01A-11R-A32Q-07 RHBDF1-NPRL3 1000 1000 chr16:61385:- chr16:138844:- . NA TCGA-QH-A6X9-01A-12R-A32Q-07 MYCBP2-PIBF1 2 31 chr13:77156058:- chr13:72973591:+ FRAMESHIFT NA TCGA-QH-A6XC-01A-12R-A32Q-07 NRBP1-DROSHA 30 99 chr2:27428731:+ chr5:31410887:- . NA TCGA-QH-A6XC-01A-12R-A32Q-07 CTNND2-NRBP1 14 102 chr5:11732136:- chr2:27433673:+ INFRAME NA TCGA-QH-A6XC-01A-12R-A32Q-07 RER1-DNAH7 3 23 chr1:2403589:+ chr2:195756285:- . NA TCGA-QH-A6XC-01A-12R-A32Q-07 C2orf42-MRPL33 2 19 chr2:70248405:- chr2:27779433:+ . NA TCGA-QH-A6XC-01A-12R-A32Q-07 TIA1-MRPL33 2 19 chr2:70248405:- chr2:27779433:+ INFRAME NA TCGA-R8-A6MK-01A-11R-A32Q-07 HIF1A-VRK1 15 62 chr14:61695839:+ chr14:96833467:+ . NA TCGA-RY-A83Z-01A-11R-A36H-07 BRAP-KLRB1 9 26 chr12:111685711:- chr12:9601599:- INFRAME NA TCGA-RY-A83Z-01A-11R-A36H-07 NSD1-RNF130 1 3 chr5:177136030:+ chr5:180040647:- FRAMESHIFT Likely Oncogenic NA TCGA-RY-A847-01A-11R-A36H-07 ABR-YWHAE 1 1 chr17:1179667:- chr17:1365058:- INFRAME NA TCGA-S9-A6TS-01A-12R-A33Z-07 JAZF1-HOXB-AS3 8 51 chr7:27991909:- chr17:48603927:+ . NA TCGA-S9-A6TS-01A-12R-A33Z-07 PARN-PLA2G10 1 9 chr16:14552021:- chr16:14672749:- INFRAME NA TCGA-S9-A6TU-01A-12R-A32Q-07 FAM208B-ZMYND11 1 2 chr10:5685175:+ chr10:209889:+ . NA TCGA-S9-A6TY-01A-12R-A32Q-07 TMCC2-MNAT1 1 1 chr1:205242044:+ chr14:60796217:+ FRAMESHIFT NA TCGA-S9-A6U0-01A-12R-A32Q-07 MAP3K10-SUPT5H 11 24 chr19:40206157:+ chr19:39457675:+ INFRAME NA TCGA-S9-A6U6-01A-12R-A33Z-07 THAP4-DOCK10 1 11 chr2:241601896:- chr2:224896377:- INFRAME NA TCGA-S9-A6U6-01A-12R-A33Z-07 ARPP21-FRMD4A 1 6 chr3:35683815:+ chr10:14083813:- . NA TCGA-S9-A6U6-01A-12R-A33Z-07 D2HGDH-CUL3 1 6 chr2:241735516:+ chr2:224511582:- FRAMESHIFT NA TCGA-S9-A6U6-01A-12R-A33Z-07 KHDRBS3-CMTM6 1 5 chr8:135557587:+ chr3:32488036:- FRAMESHIFT NA TCGA-S9-A6U9-01A-11R-A32Q-07 TOR1A-ADD1 1 1 chr9:129818520:- chr4:2928171:+ INFRAME NA TCGA-S9-A6UA-01A-12R-A33Z-07 CCDC127-SDHA 11 24 chr5:216729:- chr5:233477:+ INFRAME NA TCGA-S9-A6UA-01A-12R-A33Z-07 COPS7A-GNB3 2 13 chr12:6730820:+ chr12:6845586:+ FRAMESHIFT NA TCGA-S9-A6UA-01A-12R-A33Z-07 MOB3B-SLC24A2 3 7 chr9:27529555:- chr9:19622299:- . NA TCGA-S9-A6WE-01A-12R-A33Z-07 CPLX1-GAK 3 35 chr4:824492:- chr4:851084:- INFRAME NA TCGA-S9-A6WG-01A-11R-A33Z-07 USP32-SPANXN4 2 11 chr17:60345481:- chrX:143034025:+ INFRAME NA TCGA-S9-A6WM-01A-12R-A33Z-07 SLC25A19-EXOC7 21 83 chr17:75283423:- chr17:76120454:- . NA TCGA-S9-A6WM-01A-12R-A33Z-07 ZNF564-CACNA1A 4 9 chr19:12551330:- chr19:13286966:- FRAMESHIFT NA TCGA-S9-A6WM-01A-12R-A33Z-07 CRELD1-FANCD2 1 15 chr3:9943515:+ chr3:10092181:+ FRAMESHIFT NA TCGA-S9-A6WM-01A-12R-A33Z-07 UBTD2-BOD1 1 4 chr5:172283596:- chr5:173613255:- FRAMESHIFT NA TCGA-S9-A6WM-01A-12R-A33Z-07 EGFR-VSTM2A 1 2 chr7:55202625:+ chr7:54569131:+ INFRAME Likely Oncogenic NA TCGA-S9-A6WO-01A-21R-A34F-07 BHLHE41-RERGL 4 13 chr12:26124718:- chr12:18143293:- . NA TCGA-S9-A7IS-01A-11R-A34F-07 LNX1-SOD3 2 6 chr4:53557874:- chr4:24799506:+ . NA TCGA-S9-A7J0-01A-11R-A34F-07 PHLPP1-ADAMTS13 2 12 chr18:62717259:+ chr9:133423101:+ FRAMESHIFT NA TCGA-S9-A7J0-01A-11R-A34F-07 UMPS-ERC2 2 3 chr3:124738239:+ chr3:56019031:- FRAMESHIFT NA TCGA-S9-A7J0-01A-11R-A34F-07 CMC1-ERC2 1 5 chr3:28263380:+ chr3:56173520:- FRAMESHIFT NA TCGA-S9-A7J0-01A-11R-A34F-07 SNX4-OSBPL10 1 2 chr3:125497341:- chr3:31879830:- FRAMESHIFT NA TCGA-S9-A7R1-01A-12R-A34R-07 KDM4C-PHF24 2 6 chr9:6893232:+ chr9:34976152:+ INFRAME NA TCGA-S9-A7R2-01A-21R-A34R-07 ATP23-HIGD1C 3 32 chr12:57947076:+ chr12:50960968:+ FRAMESHIFT NA TCGA-S9-A7R2-01A-21R-A34R-07 MARS-OS9 3 0 chr12:57515991:+ chr12:57715760:+ INFRAME NA TCGA-S9-A7R3-01A-11R-A34R-07 ANO6-HNRNPUL1 11 28 chr12:45216391:+ chr19:41268223:+ INFRAME NA TCGA-S9-A7R3-01A-11R-A34R-07 TCERG1L-CNTN1 6 11 chr10:131308211:- chr12:40908357:+ . NA TCGA-S9-A7R3-01A-11R-A34R-07 ERCC2-C12orf40 3 4 chr19:45368930:- chr12:39716756:+ FRAMESHIFT NA TCGA-S9-A7R7-01A-11R-A34R-07 RBFOX2-MPPED1 4 18 chr22:35938847:- chr22:43474736:+ FRAMESHIFT NA TCGA-S9-A7R7-01A-11R-A34R-07 CBFB-COG4 2 5 chr16:67066798:+ chr16:70519731:- INFRAME NA TCGA-S9-A7R7-01A-11R-A34R-07 AKTIP-COTL1 2 4 chr16:53503147:- chr16:84566955:- . NA TCGA-S9-A7R8-01A-11R-A34R-07 LBHD1-BSCL2 8 14 chr11:62669641:- chr11:62694711:- FRAMESHIFT NA TCGA-S9-A89V-01A-11R-A36H-07 ZNF133-MS4A4A 6 13 chr20:18288604:+ chr11:60292225:+ INFRAME NA TCGA-S9-A89Z-01A-11R-A36H-07 FASTK-GNGT1 5 10 chr7:151077310:- chr7:93910790:+ FRAMESHIFT NA TCGA-S9-A89Z-01A-11R-A36H-07 KIT-HOPX 2 7 chr4:54658081:+ chr4:56656012:- FRAMESHIFT NA TCGA-S9-A89Z-01A-11R-A36H-07 CEP135-POLR2B 2 2 chr4:55981379:+ chr4:56999617:+ INFRAME NA TCGA-S9-A89Z-01A-11R-A36H-07 LONP2-CHRM3 1 5 chr16:48334358:+ chr1:239907433:+ . NA TCGA-S9-A89Z-01A-11R-A36H-07 POLR2B-CEP135 1 4 chr4:56995409:+ chr4:55985281:+ INFRAME NA TCGA-TM-A7C3-01A-11R-A32Q-07 TMCC2-MNAT1 7 80 chr1:205242044:+ chr14:60796217:+ FRAMESHIFT NA TCGA-TM-A7C3-01A-11R-A32Q-07 GPBP1L1-PVR 4 21 chr1:45659028:- chr19:44649809:+ FRAMESHIFT NA TCGA-TM-A7C3-01A-11R-A32Q-07 PPP2R3C-SPTSSA 3 17 chr14:35099252:- chr14:34435304:- INFRAME NA TCGA-TM-A7C3-01A-11R-A32Q-07 KIF5A-TSPAN31 2 16 chr12:57564973:+ chr12:57746589:+ INFRAME NA TCGA-TM-A7C3-01A-11R-A32Q-07 NOVA1-DTD2 2 11 chr14:26595410:- chr14:31453344:- FRAMESHIFT NA TCGA-TM-A7C3-01A-11R-A32Q-07 SYT16-PRELP 1 6 chr14:61812810:+ chr1:203483169:+ . NA TCGA-TM-A7CA-01A-21R-A33Z-07 ARHGEF7-PKIB 1 5 chr13:111153991:+ chr6:122717787:+ FRAMESHIFT NA TCGA-TM-A7CA-01A-21R-A33Z-07 MAP2-DCAF17 1 5 chr2:209625129:+ chr2:171448681:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 DOT1L-TECR 62 142 chr19:2194577:+ chr19:14562525:+ INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 VPS52-ZNF358 7 54 chr6:33263484:- chr19:7519205:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 COLGALT1-COPE 12 28 chr19:17560465:+ chr19:18911071:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZBTB7A-CYP4F3 5 51 chr19:4044975:- chr19:15661236:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 VEGFA-STK38 3 29 chr6:43777665:+ chr6:36499990:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 FZR1-TBC1D17 6 15 chr19:3532650:+ chr19:49887476:+ FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 RANBP3-ALDH16A1 6 7 chr19:5978061:- chr19:49458486:+ FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 CELF5-RDH8 6 6 chr19:3225618:+ chr19:10017057:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 EPS15L1-ZNF451 4 13 chr19:16385129:- chr6:57153861:+ INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 SCAF1-ETV7 3 17 chr19:49652669:+ chr6:36375601:- . NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZNF253-HSD17B14 5 9 chr19:19865999:+ chr19:48834358:- FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZNF292-GRM4 4 8 chr6:87155759:+ chr6:34133859:- . NA TCGA-TM-A7CF-01A-11R-A32Q-07 GNG7-LSM7 4 6 chr19:2702646:- chr19:2324196:- . NA TCGA-TM-A7CF-01A-11R-A32Q-07 AGPAT1-HECA 3 9 chr6:32175814:- chr6:139166284:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 ABCF1-SHC2 2 12 chr6:30586711:+ chr19:440932:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 COLGALT1-LY6G5B 3 6 chr19:17568713:+ chr6:31671156:+ INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 MYDGF-FAM187B 3 5 chr19:4659931:- chr19:35225212:- FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 TAF8-COL5A3 3 4 chr6:42077239:+ chr19:10006231:- FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZNF433-RFX1 2 8 chr19:12035537:- chr19:13980689:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 LRRC1-SH3GL1 1 10 chr6:53842227:+ chr19:4366994:- FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 CHERP-RHAG 1 9 chr19:16541870:- chr6:49619362:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 AKIRIN2-CUL7 2 4 chr6:87701450:- chr6:43052796:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 MED26-TMEM221 2 4 chr19:16627872:- chr19:17445284:- FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 SH3GL1-RUVBL2 1 8 chr19:4390052:- chr19:49010999:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 PRKCSH-ZNF826P 1 7 chr19:11442515:+ chr19:20409045:- . NA TCGA-TM-A7CF-01A-11R-A32Q-07 LMBRD1-ZBTB45 1 4 chr6:69796813:- chr19:58517673:- INFRAME NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZNF266-SMARCA4 1 4 chr19:9434065:- chr19:11019591:+ . Likely Oncogenic NA TCGA-TM-A7CF-01A-11R-A32Q-07 AGO2-DNAH10 1 3 chr8:140547468:- chr12:123893233:+ FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 SMARCA4-SMIM7 1 3 chr19:10996544:+ chr19:16647261:- FRAMESHIFT Likely Oncogenic NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZNF527-SMIM7 1 3 chr19:37380372:+ chr19:16631724:- . NA TCGA-TM-A7CF-01A-11R-A32Q-07 ZNF540-SIPA1L3 1 3 chr19:37551665:+ chr19:38162253:+ . NA TCGA-TM-A7CF-01A-11R-A32Q-07 FRMD5-ARNT2 1 2 chr15:44194953:- chr15:80450880:+ FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 PTPN9-CSPG4 1 2 chr15:75523121:- chr15:75683041:- FRAMESHIFT NA TCGA-TM-A7CF-01A-11R-A32Q-07 MOB3A-PRDM13 1 1 chr19:2076811:- chr6:99613033:+ FRAMESHIFT NA TCGA-TM-A84B-01A-11R-A36H-07 R3HDM2-KIF5A 222 786 chr12:57395749:- chr12:57563439:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 ADCYAP1R1-AQP1 181 361 chr7:31052678:+ chr7:30922066:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 METTL21B-GLI1 106 527 chr12:57773128:+ chr12:57463665:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 TMOD3-TACC3 127 276 chr15:51869373:+ chr4:1744518:+ FRAMESHIFT NA TCGA-TM-A84B-01A-11R-A36H-07 ZNF345-LGALS13 72 322 chr19:36851904:+ chr19:39605178:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 ZNF529-IGSF23 60 336 chr19:36605126:- chr19:44623703:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 CENPBD1P1-WDR62 24 93 chr19:58575588:+ chr19:36092689:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 TNIK-KCNMB2 10 30 chr3:171369620:- chr3:178807343:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 ZNF235-ZNF865 5 27 chr19:44298820:- chr19:55613593:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 PLEKHO2-TRIP4 5 21 chr15:64861575:+ chr15:64445006:+ INFRAME NA TCGA-TM-A84B-01A-11R-A36H-07 WDR62-TRAPPC6A 5 18 chr19:36089306:+ chr19:45164970:- INFRAME NA TCGA-TM-A84B-01A-11R-A36H-07 LGALS13-PTPRH 1 14 chr19:39605388:+ chr19:55188168:- FRAMESHIFT NA TCGA-TM-A84B-01A-11R-A36H-07 TNIK-DGCR8 2 8 chr3:171123596:- chr22:20106177:+ FRAMESHIFT NA TCGA-TM-A84B-01A-11R-A36H-07 NAALADL2-TIGIT 1 11 chr3:174737746:+ chr3:114299597:+ . NA TCGA-TM-A84B-01A-11R-A36H-07 ZNF345-PTPRH 2 7 chr19:36851904:+ chr19:55188168:- . NA TCGA-TM-A84B-01A-11R-A36H-07 SLC7A1-USPL1 2 4 chr13:29553761:- chr13:30621764:+ . NA TCGA-TM-A84F-01A-11R-A36H-07 RPL27-NBR1 1 1 chr17:43000102:+ chr17:43209901:+ FRAMESHIFT NA TCGA-TM-A84H-01A-11R-A36H-07 KCNB1-ZFPM2 3 10 chr20:49481914:- chr8:105419144:+ FRAMESHIFT NA TCGA-TM-A84H-01A-11R-A36H-07 TRPC4AP-KCNB1 2 11 chr20:35069296:- chr20:49374992:- INFRAME NA TCGA-TM-A84H-01A-11R-A36H-07 PTPRT-OSGIN2 1 3 chr20:42315723:- chr8:89909567:+ FRAMESHIFT Likely Oncogenic NA TCGA-TM-A84H-01A-11R-A36H-07 CPNE3-ANGPT1 1000 1000 chr8:86548434:+ chr8:107497506:- FRAMESHIFT NA TCGA-TM-A84I-01A-11R-A36H-07 ADCY9-TEAD4 61 263 chr16:4113750:- chr12:2994738:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 MARCH9-SLCO1B1 36 135 chr12:57757084:+ chr12:21172650:+ INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 CCNF-NOL4 10 144 chr16:2439826:+ chr18:34093597:- INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 GALNT1-TAF4B 31 39 chr18:35654801:+ chr18:26357690:+ FRAMESHIFT NA TCGA-TM-A84I-01A-11R-A36H-07 LYST-NARS2 32 16 chr1:235866843:- chr11:78466013:- . NA TCGA-TM-A84I-01A-11R-A36H-07 ST8SIA1-FTO 7 46 chr12:22249006:- chr16:54111762:+ INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 EIF4B-MIR4300HG 9 9 chr12:53022627:+ chr11:82356628:- . NA TCGA-TM-A84I-01A-11R-A36H-07 NTHL1-KLRC3 4 24 chr16:2047709:- chr12:10412616:- INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 RAD17-CNTN5 4 23 chr5:69382057:+ chr11:100356117:+ INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 MAML2-ANKMY2 5 18 chr11:96341383:- chr7:16627178:- INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 PGBD2-UBE4A 7 6 chr1:248917401:+ chr11:118382589:+ FRAMESHIFT NA TCGA-TM-A84I-01A-11R-A36H-07 CORO7-TRAF7 3 15 chr16:4387986:- chr16:2163883:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 GRIN2A-RASSF8 1 21 chr16:10179998:- chr12:26055279:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 MIR4300HG-MS4A4A 4 9 chr11:82356512:- chr11:60292225:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 DTX3-PLEKHA5 4 4 chr12:57604858:+ chr12:19320562:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 ETNK1-AK6P1 4 4 chr12:22644022:+ chr12:34249756:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 PAAF1-ALG1 3 3 chr11:73919032:+ chr16:5072951:+ INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 RAB6A-B4GALNT3 1 9 chr11:73707420:- chr12:535166:+ FRAMESHIFT NA TCGA-TM-A84I-01A-11R-A36H-07 EP400NL-GPBP1 1 5 chr12:132121980:+ chr5:57230846:+ . NA TCGA-TM-A84I-01A-11R-A36H-07 TSPAN5-EMCN 1 3 chr4:98658146:- chr4:100423404:- INFRAME NA TCGA-TM-A84I-01A-11R-A36H-07 AEBP2-FLYWCH2 1 2 chr12:19440370:+ chr16:2899049:+ FRAMESHIFT NA TCGA-TM-A84J-01A-11R-A36H-07 SCD-SEC61A2 67 879 chr10:100356764:+ chr10:12149595:+ INFRAME NA TCGA-TM-A84J-01A-11R-A36H-07 PDGFB-DGCR2 142 514 chr22:39230084:- chr22:19089490:- INFRAME NA TCGA-TM-A84J-01A-11R-A36H-07 ZNF239-SEC31B 79 243 chr10:43567899:- chr10:100497280:- . NA TCGA-TM-A84J-01A-11R-A36H-07 CWF19L1-HSPA12A 25 103 chr10:100267571:- chr10:116707285:- FRAMESHIFT NA TCGA-TM-A84J-01A-11R-A36H-07 CCT3-ZBTB40 25 75 chr1:156309203:- chr1:22489880:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 ZBTB40-PRCC 26 47 chr1:22452004:+ chr1:156782282:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 PLXNB2-SMPD4P1 8 39 chr22:50283337:- chr22:20613735:- . NA TCGA-TM-A84J-01A-11R-A36H-07 LUZP1-SORL1 10 17 chr1:23168766:- chr11:121470007:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 NPTXR-PDXP 2 42 chr22:38843235:- chr22:37665555:+ FRAMESHIFT NA TCGA-TM-A84J-01A-11R-A36H-07 NPTXR-SH3BP1 2 42 chr22:38843235:- chr22:37665555:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 MEF2D-SORL1 4 10 chr1:156500486:- chr11:121553937:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 CABIN1-CHEK2P4 5 3 chr22:24011367:+ chr22:16508162:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 PTPRZ1-CPED1 1 17 chr7:121873557:+ chr7:121295440:+ FRAMESHIFT NA TCGA-TM-A84J-01A-11R-A36H-07 NPTXR-LGALS1 2 11 chr22:38843235:- chr22:37676986:+ INFRAME NA TCGA-TM-A84J-01A-11R-A36H-07 BMI1-SEC61A2 1 7 chr10:22321696:+ chr10:12156907:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 SORL1-RHBG 1 6 chr11:121497049:+ chr1:156382748:+ FRAMESHIFT NA TCGA-TM-A84J-01A-11R-A36H-07 PPP6R2-GRK3 2 1 chr22:50343550:+ chr22:25661576:+ . NA TCGA-TM-A84J-01A-11R-A36H-07 MRPL24-CCT3 1 4 chr1:156737646:- chr1:156325089:- INFRAME NA TCGA-TM-A84J-01A-11R-A36H-07 CCT3-KDM1A 1 1 chr1:156333547:- chr1:23044427:+ INFRAME NA TCGA-TM-A84Q-01A-11R-A36H-07 IKBKAP-CTNNAL1 1 17 chr9:108922842:- chr9:108999256:- INFRAME NA TCGA-TQ-A7RF-01A-11R-A33Z-07 LAMA4-TSPAN18 4 8 chr6:112175313:- chr11:44906407:+ INFRAME NA TCGA-TQ-A7RF-01A-11R-A33Z-07 DOCK3-FAM212A 3 7 chr3:50778758:+ chr3:49804181:+ FRAMESHIFT NA TCGA-TQ-A7RH-01A-12R-A34F-07 DOCK10-IL1RN 5 16 chr2:224931549:- chr2:113127689:+ FRAMESHIFT NA TCGA-TQ-A7RH-01A-12R-A34F-07 RAB3IP-GYS2 4 15 chr12:69739031:+ chr12:21580523:- . NA TCGA-TQ-A7RH-01A-12R-A34F-07 CNOT2-SLCO1A2 2 4 chr12:70278274:+ chr12:21292336:- INFRAME NA TCGA-TQ-A7RJ-01A-11R-A33Z-07 TAOK1-C17orf105 5 49 chr17:29510992:+ chr17:43783837:+ INFRAME NA TCGA-TQ-A7RK-01A-11R-A33Z-07 IFT80-RARRES1 7 30 chr3:160375812:- chr3:158704927:- INFRAME NA TCGA-TQ-A7RM-01A-11R-A33Z-07 RGMB-CCDC112 29 231 chr5:98774206:+ chr5:115284908:- FRAMESHIFT NA TCGA-TQ-A7RM-01A-11R-A33Z-07 PCGF3-NPTXR 16 100 chr4:731110:+ chr22:38828512:- . NA TCGA-TQ-A7RM-01A-11R-A33Z-07 DLEU2-ARL2BPP7 11 16 chr13:50068097:- chr9:102055683:- . NA TCGA-TQ-A7RM-01A-11R-A33Z-07 EPB41L4A-SCN9A 3 8 chr5:112307386:- chr2:166251885:- INFRAME NA TCGA-TQ-A7RM-01A-11R-A33Z-07 STK39-TMEM245 2 9 chr2:168074982:- chr9:109108570:- INFRAME NA TCGA-TQ-A7RM-01A-11R-A33Z-07 RPN2-STK39 3 2 chr20:37230059:+ chr2:168167407:- INFRAME NA TCGA-TQ-A7RM-01A-11R-A33Z-07 STRIP2-CTTNBP2 2 3 chr7:129460372:+ chr7:117810989:- INFRAME NA TCGA-TQ-A7RP-01A-21R-A34F-07 ARHGAP23-CCL18 1 6 chr17:38467331:+ chr17:36070447:+ INFRAME NA TCGA-TQ-A7RR-01A-21R-A34F-07 WNK2-CENPP 2 3 chr9:93290047:+ chr9:92611314:+ FRAMESHIFT NA TCGA-TQ-A7RS-01A-12R-A33Z-07 PRKCH-MNAT1 4 13 chr14:61322464:+ chr14:60968229:+ FRAMESHIFT NA TCGA-TQ-A7RS-01A-12R-A33Z-07 SLC22A17-BCAN 1 1 chr14:23352406:- chr1:156657675:+ INFRAME NA TCGA-TQ-A7RV-01A-21R-A34F-07 ABI1-PTP4A3 5 13 chr10:26823138:- chr8:141421388:+ . NA TCGA-TQ-A7RV-01A-21R-A34F-07 KIAA1429-SYBU 3 15 chr8:94534839:- chr8:109619039:- INFRAME NA TCGA-TQ-A7RV-01A-21R-A34F-07 MLLT10-WAC 2 13 chr10:21617207:+ chr10:28535562:+ INFRAME NA TCGA-TQ-A7RV-01A-21R-A34F-07 STIM1-ANO9 1 3 chr11:4023987:+ chr11:434098:- FRAMESHIFT NA TCGA-TQ-A7RW-01A-11R-A33Z-07 KYAT3-DAP3 4 4 chr1:88992585:- chr1:155738157:+ . NA TCGA-TQ-A7RW-01A-11R-A33Z-07 RBMXL1-DAP3 4 4 chr1:88992585:- chr1:155738157:+ . NA TCGA-TQ-A7RW-01A-11R-A33Z-07 RGMA-ADAMTSL3 2 9 chr15:93088919:- chr15:83913092:+ INFRAME NA TCGA-TQ-A7RW-01A-11R-A33Z-07 COMMD6-PCDH9 1 9 chr13:75549323:- chr13:66631411:- . NA TCGA-TQ-A7RW-01A-11R-A33Z-07 UBAP1-ADAMTSL1 1 9 chr9:34234340:+ chr9:18504829:+ INFRAME NA TCGA-TQ-A8XE-01A-11R-A36H-07 TRAPPC2-ATP2B3 11 48 chrX:13719871:- chrX:153579978:+ INFRAME NA TCGA-VM-A8C8-01A-11R-A36H-07 MLLT3-TYRP1 3 14 chr9:20456704:- chr9:12693912:+ . NA TCGA-VM-A8CD-01A-11R-A36H-07 SEC24A-KCNK7 11 140 chr5:134649173:+ chr11:65593874:- INFRAME NA TCGA-VM-A8CD-01A-11R-A36H-07 SPEN-TTC34 3 18 chr1:15876678:+ chr1:2645563:- INFRAME Likely Oncogenic NA TCGA-VM-A8CD-01A-11R-A36H-07 EYA2-LHX2 3 13 chr20:47016297:+ chr9:124013961:+ FRAMESHIFT NA TCGA-VM-A8CD-01A-11R-A36H-07 CLU-MT2A 3 7 chr8:27605027:- chr16:56608592:+ . NA TCGA-VM-A8CF-01A-11R-A36H-07 CAAP1-RGAG4 2 2 chr9:26884810:- chrX:72127710:- . NA TCGA-VV-A86M-01A-11R-A36H-07 KDM5C-MAGT1 3 3 chrX:53193437:- chrX:77830895:- FRAMESHIFT Likely Oncogenic NA TCGA-VW-A8FI-01A-11R-A36H-07 PPP2R2B-DPYSL3 7 47 chr5:146878002:- chr5:147424963:- FRAMESHIFT NA TCGA-VW-A8FI-01A-11R-A36H-07 TSFM-DCTN2 2 6 chr12:57793073:+ chr12:57535845:- FRAMESHIFT NA TCGA-WH-A86K-01A-11R-A36H-07 MICA-NCR3 2 27 chr6:31403702:+ chr6:31590126:- INFRAME NA TCGA-WY-A859-01A-12R-A36H-07 TNRC6B-TMEM184B 3 45 chr22:40156182:+ chr22:38248019:- . NA TCGA-WY-A859-01A-12R-A36H-07 UBXN2A-TPO 3 24 chr2:23958355:+ chr2:1493802:+ FRAMESHIFT NA TCGA-WY-A859-01A-12R-A36H-07 HECTD4-CRY1 3 21 chr12:112381952:- chr12:107022192:- FRAMESHIFT NA TCGA-WY-A859-01A-12R-A36H-07 WDR37-PCDH12 4 17 chr10:1105267:+ chr5:141958245:- . NA TCGA-WY-A859-01A-12R-A36H-07 SMAD5-COL5A1 7 2 chr5:136132962:+ chr9:134699909:+ . NA TCGA-WY-A859-01A-12R-A36H-07 CSNK1E-CLCN3P1 1 9 chr22:38302861:- chr9:15048056:- . NA TCGA-WY-A859-01A-12R-A36H-07 ANKRD44-RFTN2 1 7 chr2:197078703:- chr2:197572280:- INFRAME NA TCGA-WY-A859-01A-12R-A36H-07 NSD2-QKI 2 3 chr4:1958036:+ chr6:163455279:+ FRAMESHIFT NA TCGA-WY-A859-01A-12R-A36H-07 RNF168-PCYT1A 1 3 chr3:196502873:- chr3:196257887:- FRAMESHIFT NA TCGA-WY-A85A-01A-21R-A36H-07 SCARB1-RIMBP2 2 5 chr12:124786357:- chr12:130517917:- . NA TCGA-WY-A85C-01A-11R-A36H-07 B4GALT4-CBLB 2 4 chr3:119236853:- chr3:105853664:- . NA TCGA-WY-A85C-01A-11R-A36H-07 SLC41A3-B4GALT4 1 1 chr3:126067947:- chr3:119237070:- . NA TCGA-WY-A85E-01A-11R-A36H-07 HAUS8-TEX101 1 32 chr19:17073274:- chr19:43406223:+ . NA TCGA-WY-A85E-01A-11R-A36H-07 VPS37B-PTPN11 1 4 chr12:122895952:- chr12:112502144:+ INFRAME NA TCGA-2V-A95S-01A-11R-A37K-07 GSK3A-CNFN 8 25 chr19:42232057:- chr19:42389039:- . NA TCGA-2V-A95S-01A-11R-A37K-07 PPFIA1-GSTP1 1 5 chr11:70272436:+ chr11:67584685:+ INFRAME NA TCGA-2Y-A9GS-01A-12R-A38B-07 XRRA1-SHANK2 24 140 chr11:74930300:- chr11:71110049:- FRAMESHIFT NA TCGA-2Y-A9GT-01A-11R-A38B-07 TMPRSS6-PPP6R3 22 926 chr22:37103216:- chr11:68609904:+ FRAMESHIFT NA TCGA-2Y-A9GU-01A-11R-A38B-07 GPC3-GPC4 5 23 chrX:133596440:- chrX:133339341:- INFRAME NA TCGA-2Y-A9GY-01A-11R-A38B-07 JADE2-UBE2B 1 7 chr5:134573762:+ chr5:134388325:+ INFRAME NA TCGA-2Y-A9GZ-01A-11R-A39D-07 RXRA-WDR5 74 46 chr9:134326659:+ chr9:134151983:+ FRAMESHIFT NA TCGA-2Y-A9GZ-01A-11R-A39D-07 ESRRA-KCNK4 26 156 chr11:64307504:+ chr11:64296878:+ FRAMESHIFT NA TCGA-2Y-A9GZ-01A-11R-A39D-07 SMLR1-PHF12 19 40 chr6:130835034:+ chr17:28908881:- . NA TCGA-2Y-A9GZ-01A-11R-A39D-07 ZNF7-KALRN 7 21 chr8:144829604:+ chr3:124395135:+ FRAMESHIFT NA TCGA-2Y-A9GZ-01A-11R-A39D-07 EXOSC9-MAPK10 2 15 chr4:121807622:+ chr4:86031431:- FRAMESHIFT NA TCGA-2Y-A9H0-01A-11R-A38B-07 SLC12A7-SKIV2L2 115 228 chr5:1057471:- chr5:55424720:+ FRAMESHIFT NA TCGA-2Y-A9H0-01A-11R-A38B-07 DAG1-LARS2 22 81 chr3:49510819:+ chr3:45547351:+ INFRAME NA TCGA-2Y-A9H0-01A-11R-A38B-07 TRIM29-PAK1 13 114 chr11:120185250:- chr11:77323360:- . NA TCGA-2Y-A9H0-01A-11R-A38B-07 PDXDC1-ADGRG1 7 57 chr16:15001856:+ chr16:57650253:+ . NA TCGA-2Y-A9H0-01A-11R-A38B-07 RXRA-KCNT2 13 9 chr9:134326659:+ chr1:196492341:- FRAMESHIFT NA TCGA-2Y-A9H0-01A-11R-A38B-07 RCBTB1-DOCK9 8 10 chr13:49580505:- chr13:98807807:- . NA TCGA-2Y-A9H0-01A-11R-A38B-07 EGFR-LYST 5 20 chr7:55019365:+ chr1:235833667:- . Likely Oncogenic NA TCGA-2Y-A9H0-01A-11R-A38B-07 ARSB-DMGDH 5 18 chr5:78955295:- chr5:79026581:- INFRAME NA TCGA-2Y-A9H0-01A-11R-A38B-07 UACA-PTPN6 5 9 chr15:70695017:- chr12:6959927:+ FRAMESHIFT NA TCGA-2Y-A9H0-01A-11R-A38B-07 MKL1-WFIKKN2 4 12 chr22:40594674:- chr17:50839499:+ . NA TCGA-2Y-A9H0-01A-11R-A38B-07 SACM1L-TCTA 6 4 chr3:45689497:+ chr3:49413056:+ FRAMESHIFT NA TCGA-2Y-A9H0-01A-11R-A38B-07 PDXDC1-RAB11FIP4 1 22 chr16:15030056:+ chr17:31434034:+ INFRAME NA TCGA-2Y-A9H0-01A-11R-A38B-07 BAHD1-KNSTRN 4 9 chr15:40441268:+ chr15:40386362:+ . NA TCGA-2Y-A9H0-01A-11R-A38B-07 TM7SF3-SNX31 2 9 chr12:27014078:- chr8:100600441:- FRAMESHIFT NA TCGA-2Y-A9H0-01A-11R-A38B-07 PRPF4B-FAM50B 3 2 chr6:4021466:+ chr6:3849789:+ . NA TCGA-2Y-A9H0-01A-11R-A38B-07 MAPKAPK3-HEMK1 1 8 chr3:50617784:+ chr3:50571710:+ INFRAME NA TCGA-2Y-A9H0-01A-11R-A38B-07 PRKCA-PPP4R4 1 7 chr17:66306127:+ chr14:94167544:+ . NA TCGA-2Y-A9H0-01A-11R-A38B-07 P4HB-AMBP 1 6 chr17:81855142:- chr9:114062758:- INFRAME NA TCGA-2Y-A9H2-01A-12R-A38B-07 TMPRSS6-PPP6R3 5 116 chr22:37103216:- chr11:68609904:+ FRAMESHIFT NA TCGA-2Y-A9H2-01A-12R-A38B-07 NUMA1-CADM2 6 24 chr11:72080458:- chr3:86065605:+ . NA TCGA-2Y-A9H2-01A-12R-A38B-07 ESYT3-FAIM 4 12 chr3:138452089:+ chr3:138629107:+ FRAMESHIFT NA TCGA-2Y-A9H2-01A-12R-A38B-07 BMPR2-TEX41 1 13 chr2:202377550:+ chr2:145182204:+ . NA TCGA-2Y-A9H2-01A-12R-A38B-07 NADSYN1-PAK1 2 9 chr11:71458544:+ chr11:77392541:- . NA TCGA-2Y-A9H2-01A-12R-A38B-07 PCNX4-GOLGA7 1 4 chr14:60147407:+ chr8:41505911:+ . NA TCGA-2Y-A9H3-01A-11R-A38B-07 ANKRD13B-IGHJ5 8 0 chr17:29613745:+ chr14:105863854:- . NA TCGA-2Y-A9H6-01A-11R-A39D-07 CPS1-MAP2 5 13 chr2:210582709:+ chr2:209705580:+ INFRAME NA TCGA-2Y-A9H6-01A-11R-A39D-07 MGRN1-C16orf96 1 4 chr16:4668312:+ chr16:4571561:+ INFRAME NA TCGA-2Y-A9H7-01A-11R-A39D-07 CLU-H19 1 10 chr8:27610475:- chr11:1995998:- . NA TCGA-2Y-A9H8-01A-11R-A39D-07 PPP1R3B-CSMD1 3 10 chr8:9151347:- chr8:4032099:- . NA TCGA-2Y-A9H8-01A-11R-A39D-07 ESYT2-PPP1R3A 1 9 chr7:158748194:- chr7:113918297:- INFRAME NA TCGA-2Y-A9H8-01A-11R-A39D-07 PPP2CB-DLC1 1 4 chr8:30812320:- chr8:13115657:- FRAMESHIFT NA TCGA-2Y-A9H9-01A-21R-A39D-07 GPLD1-FAM65B 21 44 chr6:24486075:- chr6:24875817:- FRAMESHIFT NA TCGA-2Y-A9H9-01A-21R-A39D-07 FRYL-OCIAD2 4 15 chr4:48780078:- chr4:48904611:- . NA TCGA-2Y-A9H9-01A-21R-A39D-07 KDM4A-SZT2 1 2 chr1:43669299:+ chr1:43404380:+ FRAMESHIFT NA TCGA-2Y-A9HA-01A-11R-A39D-07 SERPIND1-MICALL1 25 49 chr22:20786148:+ chr22:37937080:+ FRAMESHIFT NA TCGA-2Y-A9HA-01A-11R-A39D-07 PAPPA2-ACBD6 15 57 chr1:176771180:+ chr1:180288517:- FRAMESHIFT NA TCGA-2Y-A9HA-01A-11R-A39D-07 NCF2-PAPPA2 7 18 chr1:183569142:- chr1:176670970:+ INFRAME NA TCGA-2Y-A9HA-01A-11R-A39D-07 ATXN10-TBC1D22A 1 17 chr22:45740538:+ chr22:47111508:+ INFRAME NA TCGA-2Y-A9HA-01A-11R-A39D-07 ABL2-KCNH1 2 3 chr1:179229241:- chr1:210684138:- INFRAME NA TCGA-2Y-A9HA-01A-11R-A39D-07 PRKAG2-ACTR3C 1 2 chr7:151675420:- chr7:150249054:- INFRAME NA TCGA-4R-AA8I-01A-11R-A38B-07 HIVEP1-PTCRA 9 27 chr6:12015668:+ chr6:42923027:+ INFRAME NA TCGA-4R-AA8I-01A-11R-A38B-07 SEPT9-MYH13 4 15 chr17:77307197:+ chr17:10360188:- INFRAME NA TCGA-4R-AA8I-01A-11R-A38B-07 FLVCR2-JDP2 2 17 chr14:75635013:+ chr14:75469290:+ FRAMESHIFT NA TCGA-4R-AA8I-01A-11R-A38B-07 SFXN5-SLC8A1 3 8 chr2:73020239:- chr2:40177855:- INFRAME NA TCGA-4R-AA8I-01A-11R-A38B-07 BTBD9-CDC5L 1 7 chr6:38256409:- chr6:44445655:+ FRAMESHIFT NA TCGA-5C-A9VG-01A-11R-A37K-07 KIAA0319L-CLSPN 4 2 chr1:35470863:- chr1:35765326:- INFRAME NA TCGA-5R-AA1C-01A-11R-A41C-07 CUEDC2-ARL3 6 21 chr10:102432526:- chr10:102705489:- . NA TCGA-5R-AA1C-01A-11R-A41C-07 MIR762HG-SEPT1 1 9 chr16:30876118:+ chr16:30383014:- . NA TCGA-5R-AA1D-01A-11R-A38B-07 DNAJB1-PRKACA 31 166 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-BC-4073-01B-02R-A131-07 BID-ATP6V1E1 31 139 chr22:17738017:- chr22:17613320:- INFRAME NA TCGA-BC-4073-01B-02R-A131-07 ZDHHC2-VPS37A 15 32 chr8:17156853:+ chr8:17286347:+ FRAMESHIFT NA TCGA-BC-4073-01B-02R-A131-07 CAPZB-AKR7A3 15 17 chr1:19485436:- chr1:19286372:- FRAMESHIFT NA TCGA-BC-4073-01B-02R-A131-07 EMC1-UBR4 9 10 chr1:19244906:- chr1:19124690:- FRAMESHIFT NA TCGA-BC-4073-01B-02R-A131-07 PRLR-AGXT2 6 20 chr5:35230268:- chr5:35014119:- . NA TCGA-BC-4073-01B-02R-A131-07 RAB22A-VAPB 8 12 chr20:58311122:+ chr20:58418211:+ FRAMESHIFT NA TCGA-BC-4073-01B-02R-A131-07 SMTN-LIMK2 1 6 chr22:31088113:+ chr22:31225720:+ FRAMESHIFT NA TCGA-BC-4073-01B-02R-A131-07 BHMT2-JMY 1 2 chr5:79069815:+ chr5:79277910:+ INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 BRD4-AKAP8L 24 30 chr19:15332290:- chr19:15380612:- . Oncogenic NA TCGA-BC-A10R-01A-11R-A131-07 EIF3L-AK7 8 9 chr22:37874524:+ chr14:96456347:+ INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 VNN1-SLC18B1 4 20 chr6:132711709:- chr6:132770336:- INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 STK24-DOCK9 4 11 chr13:98576745:- chr13:98810291:- INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 AGFG2-COPS6 3 8 chr7:100554258:+ chr7:100091649:+ FRAMESHIFT NA TCGA-BC-A10R-01A-11R-A131-07 PAK2-PIGX 1 16 chr3:196782833:+ chr3:196733759:+ FRAMESHIFT NA TCGA-BC-A10R-01A-11R-A131-07 TMEM50B-GART 2 11 chr21:33479838:- chr21:33511458:- . NA TCGA-BC-A10R-01A-11R-A131-07 CYP27A1-STK36 2 5 chr2:218782437:+ chr2:218673625:+ INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 WNK2-CARD19 1 8 chr9:93290047:+ chr9:93107674:+ INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 ERN1-TEX2 1 3 chr17:64079662:- chr17:64177471:- INFRAME NA TCGA-BC-A10R-01A-11R-A131-07 HTT-GRK4 1 1 chr4:3125629:+ chr4:3027912:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 XRCC5-ABCB1 111 763 chr2:216132387:+ chr7:87504449:- INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 ABCC2-SMIM4 75 458 chr10:99810218:+ chr3:52534803:+ . NA TCGA-BC-A10T-01A-11R-A131-07 PC-ACTN4 46 146 chr11:66863774:- chr19:38700600:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 SPAG9-TEKT1 28 79 chr17:50982526:- chr17:6800945:- . NA TCGA-BC-A10T-01A-11R-A131-07 MCC-DBN1 14 46 chr5:113294329:- chr5:177460703:- INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 SLC39A14-FAM110B 12 43 chr8:22379514:+ chr8:58145907:+ . NA TCGA-BC-A10T-01A-11R-A131-07 AMBP-RAE1 11 44 chr9:114072925:- chr20:57373475:+ FRAMESHIFT NA TCGA-BC-A10T-01A-11R-A131-07 NFIX-RAD23A 13 25 chr19:12995864:+ chr19:12952689:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 ABCB4-TMEM169 7 38 chr7:87446930:- chr2:216082072:+ . NA TCGA-BC-A10T-01A-11R-A131-07 LMAN2-MCC 8 24 chr5:177334284:- chr5:113448287:- . NA TCGA-BC-A10T-01A-11R-A131-07 UGP2-MDH1 6 6 chr2:63857936:+ chr2:63594488:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 HOGA1-UBTD1 4 11 chr10:97584914:+ chr10:97570138:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 RALGAPA2-ACSM1 4 10 chr20:20629363:- chr16:20685403:- INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 FOXK2-GNG7 4 8 chr17:82563548:+ chr19:2520725:- . NA TCGA-BC-A10T-01A-11R-A131-07 CRK-GTF2I 1 19 chr17:1455877:- chr7:74698961:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 XPO5-EYS 4 7 chr6:43546571:- chr6:63726680:- FRAMESHIFT NA TCGA-BC-A10T-01A-11R-A131-07 FBXO17-NFE2L2 4 6 chr19:38975586:- chr2:177338699:- . NA TCGA-BC-A10T-01A-11R-A131-07 UQCC1-FER1L4 2 9 chr20:35366557:- chr20:35579114:- . NA TCGA-BC-A10T-01A-11R-A131-07 REPS2-TXLNG 2 4 chrX:17103779:+ chrX:16818574:+ INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 P4HA1-CCDC102A 1 7 chr10:73073731:- chr16:57521176:- INFRAME NA TCGA-BC-A10T-01A-11R-A131-07 SFMBT1-HPS3 2 2 chr3:52932062:- chr3:149160046:+ FRAMESHIFT NA TCGA-BC-A10T-01A-11R-A131-07 RLF-RTN4RL1 1 3 chr1:40161636:+ chr17:1937808:- FRAMESHIFT NA TCGA-BC-A10T-01A-11R-A131-07 NFE2L2-FBXO27 1 2 chr2:177264532:- chr19:39031320:- FRAMESHIFT NA TCGA-BC-A10T-01A-11R-A131-07 PKD1-RPS15A 1000 1000 chr16:2135475:- chr16:18784823:- FRAMESHIFT NA TCGA-BC-A10W-01A-11R-A131-07 NMNAT3-CCDC50 5 9 chr3:139627616:- chr3:191357088:+ INFRAME NA TCGA-BC-A10X-01A-11R-A131-07 PPARA-RAB2A 19 48 chr22:46151970:+ chr8:60618580:+ . NA TCGA-BC-A10Y-01A-11R-A131-07 EIF4A2-KNG1 2222 12583 chr3:186786273:+ chr3:186743705:+ INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 OAZ1-YBX2 200 1617 chr19:2269744:+ chr17:7292059:- INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 F2-FOXH1 121 849 chr11:46723518:+ chr8:144475785:- . NA TCGA-BC-A10Y-01A-11R-A131-07 RXRA-ALG9 183 233 chr9:134326659:+ chr11:111786520:- FRAMESHIFT NA TCGA-BC-A10Y-01A-11R-A131-07 STK38-TDRD7 16 113 chr6:36540072:- chr9:97487172:+ INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 CPSF1-AHNAK 14 93 chr8:144395435:- chr11:62433891:- INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 ERICH5-MATN2 15 78 chr8:98064727:+ chr8:98030462:+ INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 UBXN6-ABHD6 13 72 chr19:4453930:- chr3:58293589:+ INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 CAMKK2-ANAPC5 18 38 chr12:121296638:- chr12:121320459:- . NA TCGA-BC-A10Y-01A-11R-A131-07 SLC39A5-NABP2 4 93 chr12:56231188:+ chr12:56225448:+ . NA TCGA-BC-A10Y-01A-11R-A131-07 PSD4-IL1RN 12 28 chr2:113157535:+ chr2:113127689:+ . NA TCGA-BC-A10Y-01A-11R-A131-07 CPNE6-CARMIL3 4 56 chr14:24073678:+ chr14:24059135:+ FRAMESHIFT NA TCGA-BC-A10Y-01A-11R-A131-07 LPCAT3-MAP3K13 8 38 chr12:7018274:- chr3:185285517:+ . NA TCGA-BC-A10Y-01A-11R-A131-07 CAPN1-SPDYC 4 44 chr11:65186338:+ chr11:65172246:+ INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 MAP3K13-C1R 5 37 chr3:185291760:+ chr12:7086457:- . NA TCGA-BC-A10Y-01A-11R-A131-07 CCS-ACTN3 7 28 chr11:66600549:+ chr11:66554045:+ FRAMESHIFT NA TCGA-BC-A10Y-01A-11R-A131-07 PICK1-SH3BP1 3 40 chr22:38057850:+ chr22:37637615:+ . NA TCGA-BC-A10Y-01A-11R-A131-07 KIAA1522-GLUD1P2 6 27 chr1:32742189:+ chr10:46772484:- . NA TCGA-BC-A10Y-01A-11R-A131-07 PFKFB1-ALAS2 7 16 chrX:54993911:- chrX:55009343:- INFRAME NA TCGA-BC-A10Y-01A-11R-A131-07 CYP3A5-GJC3 2 25 chr7:99676115:- chr7:99923603:- FRAMESHIFT NA TCGA-BC-A10Y-01A-11R-A131-07 GRTP1-ADPRHL1 3 17 chr13:113363762:- chr13:113400880:- . NA TCGA-BC-A10Y-01A-11R-A131-07 PUM2-TTLL4 2 19 chr2:20350597:- chr2:218727269:+ . NA TCGA-BC-A10Y-01A-11R-A131-07 CYP3A5-AZGP1 3 11 chr7:99676115:- chr7:99972006:- FRAMESHIFT NA TCGA-BC-A10Y-01A-11R-A131-07 GUSBP11-VPREB3 2 8 chr22:23717031:- chr22:23753198:- . NA TCGA-BC-A10Y-01A-11R-A131-07 TWF2-WDR82 1 5 chr3:52235029:- chr3:52284591:- . NA TCGA-BC-A10Y-01A-11R-A131-07 SLC16A1-PTGR2 1 1 chr1:112956035:- chr14:73858816:+ . NA TCGA-BC-A10Z-01A-11R-A131-07 HGD-RABL3 110 277 chr3:120652592:- chr3:120694224:- INFRAME NA TCGA-BC-A10Z-01A-11R-A131-07 COMMD9-CYP19A1 9 10 chr11:36289362:- chr15:51242950:- . NA TCGA-BC-A10Z-01A-11R-A131-07 COMMD9-CDKL2 5 6 chr11:36289362:- chr4:75581898:- INFRAME NA TCGA-BC-A10Z-01A-11R-A131-07 SFMBT1-PBRM1 1 17 chr3:53045816:- chr3:52589255:- . Likely Oncogenic NA TCGA-BC-A10Z-01A-11R-A131-07 SUZ12-STAP2 1 15 chr17:31983104:+ chr19:4325545:- FRAMESHIFT NA TCGA-BC-A10Z-01A-11R-A131-07 MRPL52-TSKS 1 9 chr14:22833482:+ chr19:49762232:- FRAMESHIFT NA TCGA-BC-A216-01A-11R-A155-07 EPAS1-TMEM247 16 84 chr2:46378767:+ chr2:46480405:+ INFRAME NA TCGA-BC-A216-01A-11R-A155-07 TMPRSS6-MPST 3 22 chr22:37095551:- chr22:37024192:+ FRAMESHIFT NA TCGA-BC-A216-01A-11R-A155-07 SORBS2-FAM53B 5 12 chr4:185811664:- chr10:124696212:- . NA TCGA-BC-A216-01A-11R-A155-07 COG4-MTSS1L 4 14 chr16:70480729:- chr16:70664176:- . NA TCGA-BC-A216-01A-11R-A155-07 CLIP1-RSRC2 1 20 chr12:122399781:- chr12:122515227:- . NA TCGA-BC-A216-01A-11R-A155-07 WDR59-PTGES3L 3 11 chr16:74984964:- chr17:42971696:- INFRAME NA TCGA-BC-A216-01A-11R-A155-07 PLEKHA5-RASGEF1C 1 12 chr12:19132450:+ chr5:180138058:- . NA TCGA-BC-A216-01A-11R-A155-07 TRAPPC8-GAREM1 1 12 chr18:31870372:- chr18:32136460:- INFRAME NA TCGA-BC-A216-01A-11R-A155-07 HAUS6-PLIN2 2 7 chr9:19094317:- chr9:19131271:- . NA TCGA-BC-A216-01A-11R-A155-07 UBAC2-CLYBL 2 5 chr13:99318069:+ chr13:99772824:+ FRAMESHIFT NA TCGA-BC-A216-01A-11R-A155-07 WARS2-HMGCS2 1 9 chr1:119042264:- chr1:119764626:- INFRAME NA TCGA-BC-A216-01A-11R-A155-07 ATOH8-LYG2 2 2 chr2:85764182:+ chr2:99246820:- FRAMESHIFT NA TCGA-BC-A216-01A-11R-A155-07 DNM2-PDE4A 1 4 chr19:10759811:+ chr19:10416884:+ . NA TCGA-BC-A217-01A-11R-A155-07 UGT2B4-MTHFD2L 32 580 chr4:69489439:- chr4:74160055:+ . NA TCGA-BC-A217-01A-11R-A155-07 WDR37-AHNAK 28 119 chr10:1084538:+ chr11:62491831:- FRAMESHIFT NA TCGA-BC-A217-01A-11R-A155-07 CARD10-LGALS2 33 96 chr22:37515973:- chr22:37571931:- INFRAME NA TCGA-BC-A217-01A-11R-A155-07 PVR-IGSF23 14 62 chr19:44654017:+ chr19:44623707:+ INFRAME NA TCGA-BC-A217-01A-11R-A155-07 OAF-APOA5 5 84 chr11:120211510:+ chr11:116791892:- . NA TCGA-BC-A217-01A-11R-A155-07 ATN1-ENO2 10 25 chr12:6928384:+ chr12:6915821:+ . NA TCGA-BC-A217-01A-11R-A155-07 SERPINA11-SERPINA12 8 29 chr14:94452729:- chr14:94498430:- . NA TCGA-BC-A217-01A-11R-A155-07 AKAP13-MYL5 3 38 chr15:85380798:+ chr4:681893:+ . NA TCGA-BC-A217-01A-11R-A155-07 OAF-ZPR1 7 15 chr11:120211510:+ chr11:116787643:- INFRAME NA TCGA-BC-A217-01A-11R-A155-07 PAPPA2-ASTN1 2 18 chr1:176671115:+ chr1:176894830:- INFRAME NA TCGA-BC-A217-01A-11R-A155-07 FAM83G-ERCC6 4 2 chr17:18988247:- chr10:49461556:- FRAMESHIFT NA TCGA-BC-A217-01A-11R-A155-07 TRIM29-TRIM65 1 10 chr11:120185210:- chr17:75880629:- . NA TCGA-BC-A217-01A-11R-A155-07 PSEN1-ACSM1 1 8 chr14:73136583:+ chr16:20697788:- . NA TCGA-BC-A3KF-01A-11R-A213-07 TFR2-NCOR2 6 13 chr7:100626763:- chr12:124363799:- FRAMESHIFT NA TCGA-BC-A3KF-01A-11R-A213-07 NCOR1-ZNF595 2 4 chr17:16215362:- chr4:59430:+ . Likely Oncogenic NA TCGA-BC-A5W4-01A-11R-A28V-07 SBNO2-PLPPR3 3 10 chr19:1116021:- chr19:821585:- . NA TCGA-BC-A5W4-01A-11R-A28V-07 LRPAP1-TMEM175 3 4 chr4:3509185:- chr4:947709:+ . NA TCGA-BC-A5W4-01A-11R-A28V-07 UHRF2-OLFM1 1 7 chr9:6421142:+ chr9:135095864:+ INFRAME NA TCGA-BC-A69H-01A-11R-A311-07 MAP4-GTF2H5 10 78 chr3:48088773:- chr6:158191977:+ . NA TCGA-BC-A8YO-01A-11R-A37K-07 WHRN-AMBP 90 272 chr9:114466267:- chr9:114076740:- INFRAME NA TCGA-BC-A8YO-01A-11R-A37K-07 GOSR1-CPD 19 130 chr17:30484770:+ chr17:30461877:+ INFRAME NA TCGA-BC-A8YO-01A-11R-A37K-07 ARHGAP42-KMO 20 69 chr11:100859625:+ chr1:241586679:+ INFRAME NA TCGA-BC-A8YO-01A-11R-A37K-07 WNK1-B4GALNT3 23 49 chr12:830160:+ chr12:548231:+ INFRAME NA TCGA-BC-A8YO-01A-11R-A37K-07 SLC25A44-AKAP2 4 74 chr1:156194247:+ chr9:110156319:+ . NA TCGA-BC-A8YO-01A-11R-A37K-07 RBM25-DCAF4 12 21 chr14:73106038:+ chr14:72958474:+ . NA TCGA-BC-A8YO-01A-11R-A37K-07 NOP2-PIANP 4 48 chr12:6567816:- chr12:6698104:- . NA TCGA-BC-A8YO-01A-11R-A37K-07 NFE2L2-NEMP2 8 28 chr2:177264532:- chr2:190525378:- FRAMESHIFT NA TCGA-BC-A8YO-01A-11R-A37K-07 B4GALT5-RNF151 8 18 chr20:49698198:- chr16:1967274:+ . NA TCGA-BC-A8YO-01A-11R-A37K-07 XRCC5-TMEM169 8 16 chr2:216148276:+ chr2:216095838:+ . NA TCGA-BC-A8YO-01A-11R-A37K-07 MED13L-HRK 4 24 chr12:116277060:- chr12:116861466:- . NA TCGA-BC-A8YO-01A-11R-A37K-07 MEN1-CDC42BPG 1 14 chr11:64805034:- chr11:64840648:- INFRAME Likely Oncogenic NA TCGA-BC-A8YO-01A-11R-A37K-07 MFSD14B-PTPDC1 1 7 chr9:94446936:+ chr9:94095317:+ FRAMESHIFT NA TCGA-BC-A8YO-01A-11R-A37K-07 OIP5-GPR176 2 3 chr15:41313273:- chr15:39807258:- FRAMESHIFT NA TCGA-BC-A8YO-01A-11R-A37K-07 SLC22A3-CYP20A1 1 6 chr6:160443742:+ chr2:203245846:+ FRAMESHIFT NA TCGA-BC-A8YO-01A-11R-A37K-07 B4GALT5-TBL3 1 5 chr20:49713576:- chr16:1974056:+ FRAMESHIFT NA TCGA-BC-A8YO-01A-11R-A37K-07 PARD3B-CRELD2 1 2 chr2:204686282:+ chr22:49919230:+ INFRAME NA TCGA-BC-A8YO-01A-11R-A37K-07 CYP2C18-HELLS 1 1 chr10:94733438:+ chr10:94571388:+ FRAMESHIFT NA TCGA-BD-A2L6-01A-11R-A213-07 HSD17B11-UGT2A3 28 191 chr4:87390861:- chr4:68932759:- INFRAME NA TCGA-BD-A2L6-01A-11R-A213-07 MLLT10-MINPP1 4 29 chr10:21534804:+ chr10:87552082:+ INFRAME NA TCGA-BD-A2L6-01A-11R-A213-07 MGRN1-C16orf96 1 7 chr16:4625048:+ chr16:4571561:+ FRAMESHIFT NA TCGA-BW-A5NO-01A-11R-A27V-07 KIAA0319L-CIB2 13 64 chr1:35557207:- chr15:78111276:- . NA TCGA-BW-A5NO-01A-11R-A27V-07 PTPN23-CCDC14 6 36 chr3:47396217:+ chr3:123897613:- FRAMESHIFT NA TCGA-BW-A5NO-01A-11R-A27V-07 HMGCS2-NBPF7 4 17 chr1:119755427:- chr1:119836208:- . NA TCGA-BW-A5NO-01A-11R-A27V-07 MYLK-TM7SF2 3 21 chr3:123799833:- chr11:65113220:+ . NA TCGA-BW-A5NO-01A-11R-A27V-07 ZNF148-LYPLA2 5 1 chr3:125375102:- chr1:23792657:+ . NA TCGA-BW-A5NO-01A-11R-A27V-07 EP400-SDHC 3 7 chr12:131950036:+ chr1:161323614:+ . NA TCGA-BW-A5NO-01A-11R-A27V-07 CPHL1P-TM4SF1 3 2 chr3:149249022:- chr3:149371867:- . NA TCGA-BW-A5NO-01A-11R-A27V-07 TMEM223-SLC22A8 1 4 chr11:62791679:- chr11:62993878:- INFRAME NA TCGA-BW-A5NO-01A-11R-A27V-07 RBP4-GPC3 1 3 chr10:93600393:- chrX:133536293:- INFRAME NA TCGA-BW-A5NP-01A-11R-A27V-07 IRF2-ENPP6 7 156 chr4:184474379:- chr4:184112809:- . NA TCGA-BW-A5NP-01A-11R-A27V-07 ZNF252P-TSHZ2 6 32 chr8:144994479:- chr20:53487144:+ . NA TCGA-BW-A5NP-01A-11R-A27V-07 TOR3A-LYPD8 1 14 chr1:179082387:+ chr1:248751130:- . NA TCGA-CC-5258-01A-01R-A131-07 CAMSAP2-DHRS3 13 45 chr1:200761098:+ chr1:12580666:- INFRAME NA TCGA-CC-5258-01A-01R-A131-07 NBEAL1-CYP20A1 4 15 chr2:203110282:+ chr2:203266514:+ INFRAME NA TCGA-CC-5258-01A-01R-A131-07 LRRFIP2-SETD2 3 9 chr3:37174539:- chr3:47046621:- . Likely Oncogenic NA TCGA-CC-5258-01A-01R-A131-07 MAP3K13-CLPTM1L 2 7 chr3:185473761:+ chr5:1341860:- FRAMESHIFT NA TCGA-CC-5258-01A-01R-A131-07 TRIM37-MSI2 2 5 chr17:59070823:- chr17:57401379:+ FRAMESHIFT NA TCGA-CC-5260-01A-01R-A131-07 URI1-RYR1 16 64 chr19:29942664:+ chr19:38548233:+ FRAMESHIFT NA TCGA-CC-5260-01A-01R-A131-07 RAI1-MAN1A2 4 5 chr17:17681793:+ chr1:117402186:+ . NA TCGA-CC-5263-01A-01R-A131-07 OCLN-ADGRV1 15 776 chr5:69492659:+ chr5:90965415:+ . NA TCGA-CC-5263-01A-01R-A131-07 TMCO6-CYSTM1 52 174 chr5:140641780:+ chr5:140243305:+ FRAMESHIFT NA TCGA-CC-5263-01A-01R-A131-07 FAM222B-FLOT2 12 286 chr17:28834293:- chr17:28884315:- . NA TCGA-CC-5263-01A-01R-A131-07 CNN3-ALG14 37 169 chr1:94926838:- chr1:94983306:- INFRAME NA TCGA-CC-5263-01A-01R-A131-07 CLMN-VTI1B 41 69 chr14:95319711:- chr14:67653498:- INFRAME NA TCGA-CC-5263-01A-01R-A131-07 RHOG-RHOD 37 16 chr11:3840894:- chr11:67071435:+ . NA TCGA-CC-5263-01A-01R-A131-07 NIN-TPM1 30 32 chr14:50830464:- chr15:63056985:+ . NA TCGA-CC-5263-01A-01R-A131-07 KIAA1109-CCNA2 11 62 chr4:122154112:+ chr4:121821091:- . NA TCGA-CC-5263-01A-01R-A131-07 MAST4-PLIN2 15 40 chr5:66597018:+ chr9:19131271:- . NA TCGA-CC-5263-01A-01R-A131-07 NECAB3-PXMP4 13 32 chr20:33669375:- chr20:33714736:- FRAMESHIFT NA TCGA-CC-5263-01A-01R-A131-07 ABL1-PRDM12 10 32 chr9:130714455:+ chr9:130678529:+ FRAMESHIFT Likely Oncogenic NA TCGA-CC-5263-01A-01R-A131-07 ZNF341-C20orf144 4 7 chr20:33732052:+ chr20:33663532:+ FRAMESHIFT NA TCGA-CC-5263-01A-01R-A131-07 SHTN1-PDZD8 2 10 chr10:116979256:- chr10:117290348:- INFRAME NA TCGA-CC-5263-01A-01R-A131-07 TEPSIN-SLC38A10 2 10 chr17:81233432:- chr17:81272627:- FRAMESHIFT NA TCGA-CC-5263-01A-01R-A131-07 PMVK-FNBP1 1 4 chr1:154936591:- chr9:129929695:- FRAMESHIFT NA TCGA-CC-5263-01A-01R-A131-07 ADGRG6-GJE1 1 1 chr6:142302331:+ chr6:142133850:+ FRAMESHIFT NA TCGA-CC-5264-01A-01R-A131-07 MTMR12-SPEF2 12 29 chr5:32268701:- chr5:35628460:+ INFRAME NA TCGA-CC-5264-01A-01R-A131-07 KMT5B-CPSF7 3 28 chr11:68180132:- chr11:61404704:- . NA TCGA-CC-5264-01A-01R-A131-07 TRIO-ZNF131 3 7 chr5:14143882:+ chr5:43161249:+ INFRAME NA TCGA-CC-5264-01A-01R-A131-07 SPEF2-SLC6A18 1 5 chr5:35649425:+ chr5:1242707:+ INFRAME NA TCGA-CC-5264-01A-01R-A131-07 KMT5B-OR5M10 1000 1000 chr11:68180132:- chr11:56577675:- FRAMESHIFT NA TCGA-CC-5264-01A-01R-A131-07 KMT5B-OR5M1 1000 1000 chr11:68179535:- chr11:56613502:- FRAMESHIFT NA TCGA-CC-A1HT-01A-11R-A131-07 SLC30A10-MEX3A 3 2 chr1:219927028:- chr1:156077682:- INFRAME NA TCGA-CC-A1HT-01A-11R-A131-07 STAU1-PREX1 1 4 chr20:49115782:- chr20:48630794:- INFRAME NA TCGA-CC-A3M9-01A-11R-A213-07 RREB1-F13A1 3 16 chr6:7108060:+ chr6:6318682:- . NA TCGA-CC-A3M9-01A-11R-A213-07 NRXN3-ADCK1 3 12 chr14:78243802:+ chr14:77931518:+ FRAMESHIFT NA TCGA-CC-A3MA-01A-11R-A213-07 HDAC4-THAP4 38 125 chr2:239352678:- chr2:241606473:- INFRAME NA TCGA-CC-A3MA-01A-11R-A213-07 USP54-TSPAN15 26 6 chr10:73625937:- chr10:69483691:+ . NA TCGA-CC-A3MA-01A-11R-A213-07 RNF115-FAM72D 6 9 chr1:145784539:- chr1:145111503:+ FRAMESHIFT NA TCGA-CC-A3MB-01A-11R-A213-07 AGT-H19 1 11 chr1:230704193:- chr11:1995794:- . NA TCGA-CC-A3MB-01A-11R-A213-07 UBTD2-STK10 1 11 chr5:172283596:- chr5:172127421:- FRAMESHIFT NA TCGA-CC-A3MB-01A-11R-A213-07 MTIF2-PPP3R1 1 8 chr2:55262316:- chr2:68188690:- INFRAME NA TCGA-CC-A3MC-01A-11R-A22L-07 ERLEC1-CHAC2 2 14 chr2:53794449:+ chr2:53774142:+ INFRAME NA TCGA-CC-A3MC-01A-11R-A22L-07 MYBL2-IFT52 1 5 chr20:43692319:+ chr20:43620857:+ INFRAME NA TCGA-CC-A7IE-01A-21R-A38B-07 ILF3-SMARCA4 18 49 chr19:10671535:+ chr19:11023518:+ INFRAME Likely Oncogenic NA TCGA-CC-A7IE-01A-21R-A38B-07 TESK2-PRDX1 4 30 chr1:45490852:- chr1:45511414:- . NA TCGA-CC-A7IE-01A-21R-A38B-07 PXN-GCN1 1 7 chr12:120265617:- chr12:120134726:- FRAMESHIFT NA TCGA-CC-A7IG-01A-11R-A33J-07 SFXN2-SUFU 3 3 chr10:102714681:+ chr10:102592582:+ . NA TCGA-CC-A7II-01A-11R-A33J-07 HERC1-PCLAF 1 2 chr15:63764096:- chr15:64381038:- FRAMESHIFT NA TCGA-CC-A7IJ-01A-11R-A33R-07 CTNND1-STARD10 7 36 chr11:57762046:+ chr11:72793924:- . NA TCGA-CC-A7IJ-01A-11R-A33R-07 KCNMA1-DOCK1 2 19 chr10:77120973:- chr10:127451332:+ FRAMESHIFT NA TCGA-CC-A7IJ-01A-11R-A33R-07 MOB3A-VCL 5 5 chr19:2096226:- chr10:74118023:+ . NA TCGA-CC-A7IJ-01A-11R-A33R-07 DOCK1-AP3M1 1 12 chr10:127127764:+ chr10:74138382:- . NA TCGA-CC-A7IK-01A-12R-A33R-07 SREBF1-DHRS4 1 4 chr17:17836727:- chr14:23955035:+ FRAMESHIFT NA TCGA-CC-A7IL-01A-11R-A33R-07 HSD11B1-EPHX1 1 1 chr1:209707128:+ chr1:225828725:+ . NA TCGA-CC-A8HT-01A-11R-A36F-07 PTPRG-C3orf14 3 6 chr3:61562372:+ chr3:62319721:+ . NA TCGA-CC-A8HT-01A-11R-A36F-07 FANCA-SPIRE2 1 12 chr16:89769837:- chr16:89845322:+ FRAMESHIFT Likely Oncogenic NA TCGA-CC-A8HT-01A-11R-A36F-07 LY6G5B-MICB 1 5 chr6:31671284:+ chr6:31505617:+ INFRAME NA TCGA-CC-A8HU-01A-11R-A36F-07 GLMP-CCT3 10 24 chr1:156291403:- chr1:156325089:- . NA TCGA-CC-A8HU-01A-11R-A36F-07 GPC5-MIR4500HG 2 6 chr13:92144989:+ chr13:87460969:- . NA TCGA-CC-A8HV-01A-11R-A36F-07 MYO18A-SSH2 6 6 chr17:29094650:- chr17:29793937:- INFRAME NA TCGA-CC-A8HV-01A-11R-A36F-07 SMYD4-PELP1 3 13 chr17:1783035:- chr17:4691442:- FRAMESHIFT NA TCGA-CC-A8HV-01A-11R-A36F-07 SQLE-RBFOX3 3 11 chr8:125011632:+ chr17:79307824:- . NA TCGA-CC-A8HV-01A-11R-A36F-07 SRGAP2-COL2A1 2 12 chr1:206303473:+ chr12:47998431:- FRAMESHIFT NA TCGA-CC-A8HV-01A-11R-A36F-07 CYP2D6-SULT4A1 3 7 chr22:42130612:- chr22:43841932:- FRAMESHIFT NA TCGA-CC-A8HV-01A-11R-A36F-07 LYRM4-EYS 1 4 chr6:5260648:- chr6:65335146:- FRAMESHIFT NA TCGA-CC-A8HV-01A-11R-A36F-07 RELN-ORC5 1 3 chr7:103535316:- chr7:104126893:- INFRAME NA TCGA-CC-A8HV-01A-11R-A36F-07 CCT3-CD5L 1 2 chr1:156310558:- chr1:157833512:- FRAMESHIFT NA TCGA-CC-A9FU-01A-11R-A37K-07 TM2D2-IDO2 8 59 chr8:38996213:- chr8:40013565:+ INFRAME NA TCGA-CC-A9FU-01A-11R-A37K-07 RFC1-CORIN 8 48 chr4:39342345:- chr4:47680251:- INFRAME NA TCGA-CC-A9FU-01A-11R-A37K-07 ZC3H7B-L3MBTL2 3 60 chr22:41301772:+ chr22:41219419:+ . NA TCGA-CC-A9FW-01A-11R-A37K-07 AHSG-TF 1 8 chr3:186613354:+ chr3:133764182:+ INFRAME NA TCGA-DD-A113-01A-11R-A131-07 TIMM50-CTF1 10 27 chr19:39486495:+ chr16:30899415:+ FRAMESHIFT NA TCGA-DD-A113-01A-11R-A131-07 DGKQ-POLN 3 20 chr4:986806:- chr4:2095933:- FRAMESHIFT NA TCGA-DD-A113-01A-11R-A131-07 POU2F1-LCE2A 2 9 chr1:167401556:+ chr1:152698882:+ . NA TCGA-DD-A113-01A-11R-A131-07 SHPRH-PKIB 1 11 chr6:145919348:- chr6:122717787:+ FRAMESHIFT NA TCGA-DD-A115-01A-11R-A131-07 ARHGAP19-CYB5A 40 48 chr10:97292572:- chr18:74263477:- INFRAME NA TCGA-DD-A115-01A-11R-A131-07 CPT1A-ANPEP 31 66 chr11:68841775:- chr15:89785501:- . NA TCGA-DD-A115-01A-11R-A131-07 MKL1-SPIDR 19 97 chr22:40636478:- chr8:47673801:+ . NA TCGA-DD-A115-01A-11R-A131-07 CALD1-CGN 9 39 chr7:134891673:+ chr1:151518506:+ . NA TCGA-DD-A115-01A-11R-A131-07 CPM-GOLT1B 8 37 chr12:68932678:- chr12:21506885:+ INFRAME NA TCGA-DD-A115-01A-11R-A131-07 COQ10A-NABP2 7 26 chr12:56269561:+ chr12:56223584:+ . NA TCGA-DD-A115-01A-11R-A131-07 ABHD6-FLNB 5 14 chr3:58256705:+ chr3:58118872:+ FRAMESHIFT NA TCGA-DD-A115-01A-11R-A131-07 SLCO2B1-HNF4A 1 26 chr11:75159872:+ chr20:44402554:+ . NA TCGA-DD-A115-01A-11R-A131-07 AKNA-WHRN 2 10 chr9:114367543:- chr9:114426413:- INFRAME NA TCGA-DD-A115-01A-11R-A131-07 SLC25A30-CCDC107 2 7 chr13:45408927:- chr9:35658576:+ FRAMESHIFT NA TCGA-DD-A115-01A-11R-A131-07 ATP8B1-SLC50A1 1 4 chr18:57695171:- chr1:155136299:+ FRAMESHIFT NA TCGA-DD-A116-01A-11R-A131-07 CNN2-WDR18 42 196 chr19:1026724:+ chr19:994020:+ INFRAME NA TCGA-DD-A116-01A-11R-A131-07 S1PR2-FDX2 3 24 chr19:10224012:- chr19:10310940:- FRAMESHIFT NA TCGA-DD-A116-01A-11R-A131-07 GALNT14-FHIT 1 2 chr2:30966204:- chr3:59752321:- FRAMESHIFT NA TCGA-DD-A118-01A-11R-A131-07 SHC1-NUP210L 2 12 chr1:154970032:- chr1:154100143:- FRAMESHIFT NA TCGA-DD-A118-01A-11R-A131-07 ZNF557-MBD3L2 2 12 chr19:7070653:+ chr19:7051041:+ . NA TCGA-DD-A118-01A-11R-A131-07 POC1A-TWF2 3 3 chr3:52122379:- chr3:52230995:- INFRAME NA TCGA-DD-A11A-01A-11R-A131-07 DCAF5-ERH 10 134 chr14:69152765:- chr14:69387083:- INFRAME NA TCGA-DD-A11A-01A-11R-A131-07 FGGY-HOOK1 2 8 chr1:59607910:+ chr1:59833405:+ INFRAME NA TCGA-DD-A11A-01A-11R-A131-07 VAV1-C1orf198 1 12 chr19:6843166:+ chr1:230839908:- FRAMESHIFT NA TCGA-DD-A11C-01A-11R-A131-07 TMED10-MRPL48 225 752 chr14:75176355:- chr11:73844807:+ INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 EPHX1-RAD51B 28 91 chr1:225844623:+ chr14:68594485:+ FRAMESHIFT NA TCGA-DD-A11C-01A-11R-A131-07 LMBRD2-NADK2 7 18 chr5:36151556:- chr5:36207265:- . NA TCGA-DD-A11C-01A-11R-A131-07 STXBP2-TRIM4 4 15 chr19:7639807:+ chr7:99892746:- FRAMESHIFT NA TCGA-DD-A11C-01A-11R-A131-07 CREBBP-NLRC3 4 11 chr16:3767720:- chr16:3548753:- FRAMESHIFT Likely Oncogenic NA TCGA-DD-A11C-01A-11R-A131-07 SEC61A1-KBTBD12 1 21 chr3:128052902:+ chr3:127984097:+ FRAMESHIFT NA TCGA-DD-A11C-01A-11R-A131-07 SLMAP-CUL4B 1 21 chr3:57757849:+ chrX:120574630:- . NA TCGA-DD-A11C-01A-11R-A131-07 XRCC6-ACO2 2 16 chr22:41628230:+ chr22:41520171:+ INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 RNF213-HSD17B14 5 2 chr17:80313167:+ chr19:48815141:- INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 FRMD8-DPF2 3 9 chr11:65405068:+ chr11:65351683:+ INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 CUL4B-DAPK2 3 5 chrX:120557924:- chr15:63983754:- INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 EIF2B2-YLPM1 2 5 chr14:75006714:+ chr14:74835265:+ INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 RAP1A-C1orf162 1 8 chr1:111627559:+ chr1:111476018:+ . NA TCGA-DD-A11C-01A-11R-A131-07 ANXA6-CCDC69 1 6 chr5:151122147:- chr5:151187459:- INFRAME NA TCGA-DD-A11C-01A-11R-A131-07 GATA6-RBBP8 1 5 chr18:22183043:+ chr18:22911600:+ . NA TCGA-DD-A11C-01A-11R-A131-07 SDHC-UFC1 1 4 chr1:161328497:+ chr1:161153926:+ . NA TCGA-DD-A11C-01A-11R-A131-07 ZC3H18-ZFPM1 1 2 chr16:88577726:+ chr16:88514387:+ FRAMESHIFT NA TCGA-DD-A11D-01A-11R-A131-07 ARID1A-PRKCZ 8 20 chr1:26762319:+ chr1:2135262:+ INFRAME Likely Oncogenic NA TCGA-DD-A11D-01A-11R-A131-07 MYLIP-KHDC1L 3 4 chr6:16130747:+ chr6:73225421:- . NA TCGA-DD-A11D-01A-11R-A131-07 RARS2-IP6K3 2 4 chr6:87589922:- chr6:33735655:- . NA TCGA-DD-A1EB-01A-11R-A131-07 PPP3CB-VMP1 4 40 chr10:73467553:- chr17:59731421:+ . NA TCGA-DD-A1EB-01A-11R-A131-07 IP6K1-MON1A 3 20 chr3:49786354:- chr3:49913359:- . NA TCGA-DD-A1EB-01A-11R-A131-07 PLXNB1-SLC26A6 3 20 chr3:48419577:- chr3:48629711:- INFRAME NA TCGA-DD-A1EB-01A-11R-A131-07 VAMP1-CHD4 2 13 chr12:6464890:- chr12:6602497:- INFRAME NA TCGA-DD-A1EB-01A-11R-A131-07 UBA6-TMPRSS11D 1000 1000 chr4:67701049:- chr4:67884025:- . NA TCGA-DD-A1EC-01A-21R-A131-07 DNAJB1-PRKACA 246 1473 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-DD-A1EE-01A-11R-A131-07 UGT1A6-GLUL 1 8 chr2:233691820:+ chr1:182386402:- . NA TCGA-DD-A1EE-01A-11R-A131-07 GLUL-CYP3A4 1 7 chr1:182391679:- chr7:99770235:- . NA TCGA-DD-A1EF-01A-11R-A131-07 PPA1-MICU1 1 33 chr10:70233264:- chr10:72508269:- FRAMESHIFT NA TCGA-DD-A1EF-01A-11R-A131-07 ZNF385A-CBX5 1 4 chr12:54373973:- chr12:54257692:- . NA TCGA-DD-A1EH-01A-11R-A131-07 APOB-CLU 1 10 chr2:21029639:- chr8:27598635:- INFRAME NA TCGA-DD-A1EJ-01A-11R-A155-07 DNAJC3-MCF2L 12 35 chr13:95677337:+ chr13:113024644:+ INFRAME NA TCGA-DD-A1EJ-01A-11R-A155-07 STRN3-MAML3 11 27 chr14:31025904:- chr4:139730667:- INFRAME NA TCGA-DD-A1EJ-01A-11R-A155-07 ITPR2-DCDC2 11 15 chr12:26628033:- chr6:24278211:- FRAMESHIFT NA TCGA-DD-A1EJ-01A-11R-A155-07 UBE2K-SLC9B2 6 14 chr4:39755739:+ chr4:103031808:- FRAMESHIFT NA TCGA-DD-A1EJ-01A-11R-A155-07 MCF2L-GAS6 2 8 chr13:113014846:+ chr13:113848050:- FRAMESHIFT NA TCGA-DD-A1EJ-01A-11R-A155-07 TUBD1-USP32 1 7 chr17:59878103:- chr17:60223586:- INFRAME NA TCGA-DD-A1EK-01A-11R-A213-07 SIPA1L3-C1QTNF3 3 30 chr19:37907358:+ chr5:34035758:- . NA TCGA-DD-A1EK-01A-11R-A213-07 KIAA1109-CCNA2 3 13 chr4:122154112:+ chr4:121821091:- . NA TCGA-DD-A1EL-01A-11R-A155-07 PREX2-C8orf34 7 53 chr8:68157436:+ chr8:68437846:+ . NA TCGA-DD-A1EL-01A-11R-A155-07 ANKAR-MFSD6 2 12 chr2:189696369:+ chr2:190488657:+ INFRAME NA TCGA-DD-A39V-01A-11R-A213-07 CLIC4-CCDC28B 72 233 chr1:24745625:+ chr1:32201913:+ . NA TCGA-DD-A39W-01A-11R-A213-07 ADH1B-CES1 1 7 chr4:99311521:- chr16:55833096:- . NA TCGA-DD-A39X-01A-11R-A213-07 WAPL-MMRN2 5 24 chr10:86517571:- chr10:86937125:- INFRAME NA TCGA-DD-A39X-01A-11R-A213-07 BCAT2-NUCB1 2 10 chr19:48810984:- chr19:48911149:+ FRAMESHIFT NA TCGA-DD-A39X-01A-11R-A213-07 NPR2-GCKR 2 1 chr9:35799731:+ chr2:27507681:+ INFRAME NA TCGA-DD-A3A3-01A-11R-A22L-07 A2M-SERPINA1 2 11 chr12:9080094:- chr14:94378640:- FRAMESHIFT NA TCGA-DD-A3A5-01A-11R-A22L-07 IGFBP2-RPL37A 34 300 chr2:216633965:+ chr2:216520714:+ INFRAME NA TCGA-DD-A3A5-01A-11R-A22L-07 FTCD-SPATC1L 27 71 chr21:46154149:- chr21:46168658:- INFRAME NA TCGA-DD-A3A5-01A-11R-A22L-07 HMGCS1-SLC38A9 21 61 chr5:43292474:- chr5:55669879:- INFRAME NA TCGA-DD-A3A5-01A-11R-A22L-07 ACVR1B-ACVRL1 6 43 chr12:51951834:+ chr12:51912470:+ INFRAME NA TCGA-DD-A3A5-01A-11R-A22L-07 TRMU-TMEM184B 1 14 chr22:46337944:+ chr22:38231334:- FRAMESHIFT NA TCGA-DD-A3A5-01A-11R-A22L-07 GOLGA8A-AQR 3 4 chr15:34404917:- chr15:34852067:- . NA TCGA-DD-A3A5-01A-11R-A22L-07 DPP4-THSD7B 2 5 chr2:162073399:- chr2:137056420:+ INFRAME NA TCGA-DD-A3A5-01A-11R-A22L-07 AAK1-RPIA 1 8 chr2:69556860:- chr2:88729278:+ INFRAME NA TCGA-DD-A3A5-01A-11R-A22L-07 UBA6-CCNA2 2 3 chr4:67701049:- chr4:121821091:- FRAMESHIFT NA TCGA-DD-A3A8-01A-11R-A22L-07 THOP1-FTCD 2 1 chr19:2799791:+ chr21:46137334:- INFRAME NA TCGA-DD-A3A9-01A-11R-A266-07 PRKCA-LRRC37A17P 3 5 chr17:66306127:+ chr17:47021850:+ . NA TCGA-DD-A4NA-01A-11R-A266-07 RHPN2-SLC7A10 290 952 chr19:33044249:- chr19:33213002:- INFRAME NA TCGA-DD-A4NA-01A-11R-A266-07 DCDC2-GPLD1 1 15 chr6:24301715:- chr6:24437289:- FRAMESHIFT NA TCGA-DD-A4NA-01A-11R-A266-07 RALGAPB-LBP 3 2 chr20:38473069:+ chr20:38371280:+ . NA TCGA-DD-A4NA-01A-11R-A266-07 DNAJB1-PRKACA 1 2 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-DD-A4NB-01A-12R-A266-07 DNAJB1-PRKACA 116 989 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-DD-A4ND-01A-11R-A266-07 FADS2-SHANK2 20 150 chr11:61828597:+ chr11:71056558:- INFRAME NA TCGA-DD-A4ND-01A-11R-A266-07 KDM2A-NDUFV1 3 68 chr11:67181892:+ chr11:67608396:+ FRAMESHIFT NA TCGA-DD-A4ND-01A-11R-A266-07 KDM2A-ADAM5 5 20 chr11:67219403:+ chr8:39417214:+ . NA TCGA-DD-A4ND-01A-11R-A266-07 ANO1-RPLP0P2 1 14 chr11:70153128:+ chr11:61636129:+ . NA TCGA-DD-A4ND-01A-11R-A266-07 TCIRG1-H19 1 12 chr11:68043907:+ chr11:1997275:- . NA TCGA-DD-A4NH-01A-11R-A27V-07 AMBP-ORM1 1 5 chr9:114072925:- chr9:114326292:+ FRAMESHIFT NA TCGA-DD-A4NH-01A-11R-A27V-07 ITPR2-DDX11 1 2 chr12:26621123:- chr12:31103317:+ INFRAME NA TCGA-DD-A4NN-01A-11R-A28V-07 ENTPD5-MICU1 28 114 chr14:73970010:- chr10:72551341:- INFRAME NA TCGA-DD-A4NN-01A-11R-A28V-07 PC-CAT 8 48 chr11:66863774:- chr11:34449192:+ INFRAME NA TCGA-DD-A4NN-01A-11R-A28V-07 AASDHPPT-ABTB2 2 7 chr11:106079692:+ chr11:34204690:- INFRAME NA TCGA-DD-A4NO-01A-11R-A28V-07 SMOX-SLC24A3 1 14 chr20:4148977:+ chr20:19654062:+ . NA TCGA-DD-A4NO-01A-11R-A28V-07 RAB8B-TLN2 2 3 chr15:63189748:+ chr15:62738214:+ FRAMESHIFT NA TCGA-DD-A4NP-01A-11R-A28V-07 CYP2E1-REG3A 2 19 chr10:133527572:+ chr2:79157698:- INFRAME NA TCGA-DD-A4NP-01A-11R-A28V-07 SERPINC1-HP 2 16 chr1:173914553:- chr16:72059117:+ FRAMESHIFT NA TCGA-DD-A4NV-01A-11R-A311-07 ALDOB-C3 1 35 chr9:101428469:- chr19:6713509:- FRAMESHIFT NA TCGA-DD-A73A-01A-12R-A32O-07 PDHB-C3orf67 6 74 chr3:58429708:- chr3:58753863:- FRAMESHIFT NA TCGA-DD-A73A-01A-12R-A32O-07 BAX-VAV2 3 10 chr19:48960914:+ chr9:133764109:- INFRAME NA TCGA-DD-A73B-01A-12R-A32O-07 ZHX3-CHD6 3 21 chr20:41202057:- chr20:41405489:- INFRAME NA TCGA-DD-A73C-01A-12R-A33J-07 AP1G1-PMFBP1 14 37 chr16:71769623:- chr16:72154459:- INFRAME NA TCGA-DD-A73C-01A-12R-A33J-07 SLC7A2-TERT 8 28 chr8:17502302:+ chr5:1282624:- . NA TCGA-DD-A73C-01A-12R-A33J-07 CCDC152-HP 3 23 chr5:42801141:+ chr16:72060759:+ . NA TCGA-DD-A73C-01A-12R-A33J-07 TF-HMGCS2 1 10 chr3:133754671:+ chr1:119750908:- INFRAME NA TCGA-DD-A73C-01A-12R-A33J-07 SERPINA1-TF 1 9 chr14:94382592:- chr3:133753595:+ INFRAME NA TCGA-DD-A73D-01A-12R-A32O-07 ITPK1-SPINK4 7 10 chr14:93115069:- chr9:33218365:+ . NA TCGA-DD-A73F-01A-11R-A32O-07 PXK-FLNB 18 77 chr3:58333090:+ chr3:58159554:+ INFRAME NA TCGA-DD-A73F-01A-11R-A32O-07 CEBPG-GPATCH1 15 50 chr19:33373895:+ chr19:33126588:+ . NA TCGA-DD-A73F-01A-11R-A32O-07 KIFC3-CNGB1 8 77 chr16:57862729:- chr16:57897914:- INFRAME NA TCGA-DD-A73F-01A-11R-A32O-07 GNB1-TXNDC11 12 17 chr1:1890820:- chr16:11684245:- . NA TCGA-DD-A73F-01A-11R-A32O-07 PRRG4-CROT 5 43 chr11:32840239:+ chr7:87398524:+ INFRAME NA TCGA-DD-A73F-01A-11R-A32O-07 EMP2-TVP23A 8 21 chr16:10580549:- chr16:10775096:- . NA TCGA-DD-A73F-01A-11R-A32O-07 CLASRP-TMEM217 4 17 chr19:45060627:+ chr6:37219041:- . NA TCGA-DD-A73F-01A-11R-A32O-07 PITPNC1-THUMPD1 5 13 chr17:67378202:+ chr16:20703909:- . NA TCGA-DD-A73F-01A-11R-A32O-07 CAPZA2-ABCB1 4 7 chr7:116811102:+ chr7:87539345:- . NA TCGA-DD-A73F-01A-11R-A32O-07 FNIP1-CYP3A4 1 10 chr5:131796830:- chr7:99758228:- FRAMESHIFT NA TCGA-DD-A73F-01A-11R-A32O-07 CCDC73-CAV1 2 3 chr11:32794613:- chr7:116558946:+ . NA TCGA-DD-A73F-01A-11R-A32O-07 SLC29A1-RABEPK 1 6 chr6:44227342:+ chr9:125200780:+ FRAMESHIFT NA TCGA-DD-A73F-01A-11R-A32O-07 CROCC2-TMEM232 1 4 chr2:240968262:+ chr5:110390640:- . NA TCGA-DD-A73F-01A-11R-A32O-07 PRKCA-RASGRF2 1 4 chr17:66306127:+ chr5:81042877:+ FRAMESHIFT NA TCGA-DD-A73F-01A-11R-A32O-07 USP18-DAPK2 1 4 chr22:18160268:+ chr15:63983754:- INFRAME NA TCGA-DD-A73F-01A-11R-A32O-07 AFP-SMC1A 1000 1000 chr4:73447542:+ chrX:53422646:- . NA TCGA-DD-A73F-01A-11R-A32O-07 F13B-NR1I3 1000 1000 chr1:197040670:- chr1:161238205:- . NA TCGA-DD-A73G-01A-22R-A32O-07 TRIO-SNHG18 23 83 chr5:14420021:+ chr5:9548990:+ . NA TCGA-DD-A73G-01A-22R-A32O-07 MLLT10-SKIDA1 2 9 chr10:21617207:+ chr10:21523871:- . NA TCGA-DD-A73G-01A-22R-A32O-07 GCN1-PLA2G1B 1 6 chr12:120190298:- chr12:120326020:- INFRAME NA TCGA-DD-A73G-01A-22R-A32O-07 TESK2-PRDX1 1 4 chr1:45490852:- chr1:45519054:- . NA TCGA-DD-AA3A-01A-11R-A37K-07 EPHA6-TSC22D2 5 22 chr3:96866889:+ chr3:150457076:+ FRAMESHIFT NA TCGA-DD-AACD-01A-11R-A41C-07 TIPARP-LEKR1 4 6 chr3:156696025:+ chr3:156888297:+ INFRAME NA TCGA-DD-AACD-01A-11R-A41C-07 CEP85-CLIC4 3 3 chr1:26239838:+ chr1:24839860:+ INFRAME NA TCGA-DD-AACE-01A-11R-A41C-07 CS-SMARCC2 6 27 chr12:56285916:- chr12:56171937:- INFRAME NA TCGA-DD-AACH-01A-11R-A41C-07 SMURF1-CDRT15L2 15 37 chr7:99081075:- chr17:20580149:+ . NA TCGA-DD-AACH-01A-11R-A41C-07 SCARB1-NDUFB10P1 3 12 chr12:124863595:- chr15:57325855:- . NA TCGA-DD-AACH-01A-11R-A41C-07 ZSCAN25-SLC47A1P1 1 7 chr7:99617016:+ chr17:19594210:+ . NA TCGA-DD-AACS-01A-11R-A41C-07 ICE1-TERT 1 7 chr5:5447897:+ chr5:1282624:- INFRAME NA TCGA-DD-AACU-01A-11R-A41C-07 AXIN1-NPRL3 1 18 chr16:346148:- chr16:119255:- INFRAME Likely Oncogenic NA TCGA-DD-AACU-01A-11R-A41C-07 NFE2L2-GAPVD1 2 5 chr2:177232392:- chr9:125321433:+ INFRAME NA TCGA-DD-AACV-01A-11R-A41C-07 SPTBN4-RAD51B 1 6 chr19:40467305:+ chr14:68291884:+ . NA TCGA-DD-AACX-01A-11R-A41C-07 GNPTG-HAGH 1 2 chr16:1352306:+ chr16:1809833:- FRAMESHIFT NA TCGA-DD-AAD0-01A-11R-A41C-07 NCOA6-PSMD13 13 27 chr20:34741558:- chr11:244041:+ INFRAME NA TCGA-DD-AAD0-01A-11R-A41C-07 QRICH1-TRAIP 1 10 chr3:49076709:- chr3:49832068:- FRAMESHIFT NA TCGA-DD-AAD0-01A-11R-A41C-07 AP2A2-PKD1L3 1 7 chr11:977224:+ chr16:71980134:- INFRAME NA TCGA-DD-AAD0-01A-11R-A41C-07 WRN-NRG1 2 3 chr8:31167230:+ chr8:32727949:+ FRAMESHIFT NA TCGA-DD-AAD1-01A-11R-A41C-07 ATP11C-CXorf66 2 11 chrX:139932016:- chrX:139958217:- FRAMESHIFT NA TCGA-DD-AAD1-01A-11R-A41C-07 PCCA-MBNL2 2 3 chr13:100157340:+ chr13:97391322:+ INFRAME NA TCGA-DD-AAD1-01A-11R-A41C-07 AKAP11-PACS1 2 2 chr13:42303863:+ chr11:66193486:+ INFRAME NA TCGA-DD-AAD5-01A-11R-A41C-07 PTDSS2-IFITM2 24 62 chr11:460288:+ chr11:314922:+ FRAMESHIFT NA TCGA-DD-AAD5-01A-11R-A41C-07 PTDSS2-IFITM1 24 53 chr11:460288:+ chr11:314922:+ FRAMESHIFT NA TCGA-DD-AAD5-01A-11R-A41C-07 IDUA-ALS2CR12 9 33 chr4:987949:+ chr2:201289785:- FRAMESHIFT NA TCGA-DD-AAD6-01A-11R-A41C-07 RNF213-SLC26A11 2 18 chr17:80348286:+ chr17:80251329:+ INFRAME NA TCGA-DD-AADA-01A-11R-A41C-07 CLSTN3-LRRC23 154 489 chr12:7143311:+ chr12:6913891:+ INFRAME NA TCGA-DD-AADA-01A-11R-A41C-07 GTF2F2-GPALPP1 2 7 chr13:45252970:+ chr13:45014952:+ INFRAME NA TCGA-DD-AADB-01A-11R-A41C-07 AXIN1-LUC7L 2 2 chr16:304304:- chr16:199238:- INFRAME Likely Oncogenic NA TCGA-DD-AADB-01A-11R-A41C-07 EIF1AD-CATSPER1 1 3 chr11:65999350:- chr11:66017174:- INFRAME NA TCGA-DD-AADC-01A-11R-A41C-07 CLTC-PRKCA 4 21 chr17:59620173:+ chr17:66687111:+ FRAMESHIFT NA TCGA-DD-AADC-01A-11R-A41C-07 PRKCA-RPS6KB1 3 19 chr17:66687267:+ chr17:59910562:+ FRAMESHIFT NA TCGA-DD-AADC-01A-11R-A41C-07 EXOSC5-FCGBP 3 6 chr19:41387514:- chr19:39863892:- INFRAME NA TCGA-DD-AADC-01A-11R-A41C-07 PTRF-HEATR6 3 4 chr17:42422627:- chr17:60048388:- INFRAME NA TCGA-DD-AADC-01A-11R-A41C-07 TF-CLDN11 3 4 chr3:133766433:+ chr3:170502811:+ . NA TCGA-DD-AADC-01A-11R-A41C-07 SMPX-MID1 2 2 chrX:21737549:- chrX:10501559:- . NA TCGA-DD-AADC-01A-11R-A41C-07 STXBP4-GRN 2 1 chr17:54990957:+ chr17:44352341:+ INFRAME NA TCGA-DD-AADF-01A-11R-A41C-07 PCCA-ARL4D 1 8 chr13:100425731:+ chr17:43399661:+ . NA TCGA-DD-AADF-01A-11R-A41C-07 CHMP4B-SYCP2L 1 4 chr20:33811658:+ chr6:10955116:+ INFRAME NA TCGA-DD-AADG-01A-11R-A41C-07 COPS5-MTCO1P7 7 0 chr8:67056568:- chr2:130275241:+ . NA TCGA-DD-AADG-01A-11R-A41C-07 PPP1R42-MTCO1P7 7 0 chr8:67056568:- chr2:130275241:+ . NA TCGA-DD-AADJ-01A-11R-A41C-07 RPS6KA3-EIF1AX 27 40 chrX:20266564:- chrX:20135841:- FRAMESHIFT NA TCGA-DD-AADJ-01A-11R-A41C-07 UPF3A-CDC16 2 17 chr13:114286629:+ chr13:114261887:+ FRAMESHIFT NA TCGA-DD-AADL-01A-11R-A41C-07 SEC14L2-CCDC157 6 45 chr22:30416403:+ chr22:30361961:+ . NA TCGA-DD-AADM-01A-11R-A41C-07 ALDH1L1-SLC41A3 16 60 chr3:126153444:- chr3:126051050:- INFRAME NA TCGA-DD-AADM-01A-11R-A41C-07 SFMBT1-ITIH4 7 96 chr3:53018086:- chr3:52814071:- . NA TCGA-DD-AADN-01A-11R-A41C-07 ECD-MRPS16 2 3 chr10:73134603:- chr10:73250991:- INFRAME NA TCGA-DD-AADP-01A-11R-A39D-07 SBF2-C11orf49 3 60 chr11:10193902:- chr11:47052388:+ FRAMESHIFT NA TCGA-DD-AADP-01A-11R-A39D-07 RSF1-CLNS1A 8 17 chr11:77740731:- chr11:77629899:- INFRAME NA TCGA-DD-AADP-01A-11R-A39D-07 ISG20L2-HDGF 2 8 chr1:156726906:- chr1:156759219:- . NA TCGA-DD-AADP-01A-11R-A39D-07 RASSF3-XPOT 2 2 chr12:64684894:+ chr12:64431538:+ FRAMESHIFT NA TCGA-DD-AADR-01A-11R-A41C-07 DBT-SASS6 2 5 chr1:100235436:- chr1:100121549:- INFRAME NA TCGA-DD-AADV-01A-11R-A39D-07 GPATCH3-KDF1 2 10 chr1:26893389:- chr1:26952412:- . NA TCGA-DD-AADV-01A-11R-A39D-07 MAP3K13-EHHADH 1 2 chr3:185328962:+ chr3:185235462:- . NA TCGA-DD-AADV-01A-11R-A39D-07 KLF15-ABI3BP 1 1 chr3:126351841:- chr3:100775335:- FRAMESHIFT NA TCGA-DD-AADY-01A-11R-A41C-07 FAM168A-PPME1 6 11 chr11:73597923:- chr11:74203728:+ . NA TCGA-DD-AADY-01A-11R-A41C-07 RNF121-SLC22A8 4 14 chr11:71960891:+ chr11:62996152:- FRAMESHIFT NA TCGA-DD-AADY-01A-11R-A41C-07 MACROD1-PDE2A 1 3 chr11:64151239:- chr11:72631139:- INFRAME NA TCGA-DD-AADY-01A-11R-A41C-07 MRPL48-LRP5 1 3 chr11:73825796:+ chr11:68347847:+ FRAMESHIFT NA TCGA-DD-AADY-01A-11R-A41C-07 RAB6A-TUT1 1 3 chr11:73707420:- chr11:62577291:- FRAMESHIFT NA TCGA-DD-AAE1-01A-11R-A41C-07 FTL-H19 1 181 chr19:48965609:+ chr11:1995794:- . NA TCGA-DD-AAE1-01A-11R-A41C-07 H19_2-ORM2 3 11 chr11:1997539:+ chr9:114329873:+ . NA TCGA-DD-AAE1-01A-11R-A41C-07 IL6R-TDRD10 2 3 chr1:154436110:+ chr1:154542024:+ FRAMESHIFT NA TCGA-DD-AAE2-01A-11R-A41C-07 CAPN5-HSD17B14 102 245 chr11:77093813:+ chr19:48815141:- INFRAME NA TCGA-DD-AAE2-01A-11R-A41C-07 RANBP10-LCAT 11 65 chr16:67738013:- chr16:67940478:- FRAMESHIFT NA TCGA-DD-AAE2-01A-11R-A41C-07 KLHL26-TMEM59L 10 27 chr19:18668441:+ chr19:18613872:+ INFRAME NA TCGA-DD-AAE2-01A-11R-A41C-07 RNF144B-CFAP206 7 29 chr6:18399699:+ chr6:87464020:+ INFRAME NA TCGA-DD-AAE2-01A-11R-A41C-07 RAB7A-WDR5 7 8 chr3:128726359:+ chr9:134139820:+ . NA TCGA-DD-AAE2-01A-11R-A41C-07 UGT2B11-SULT1D1P 2 25 chr4:69214002:- chr4:69800883:- . NA TCGA-DD-AAE2-01A-11R-A41C-07 ADI1-DPY30 4 10 chr2:3519368:- chr2:32039492:- . NA TCGA-DD-AAE2-01A-11R-A41C-07 GUSBP11-GGT5 2 10 chr22:23700726:- chr22:24226767:- . NA TCGA-DD-AAE2-01A-11R-A41C-07 DDX19B-ST3GAL2 1 4 chr16:70299354:+ chr16:70399533:- . NA TCGA-DD-AAE2-01A-11R-A41C-07 ARHGEF10L-PYCR1 1 2 chr1:17539950:+ chr17:81936861:- . NA TCGA-DD-AAE4-01A-11R-A41C-07 SPECC1L-RAD51B 16 30 chr22:24270983:+ chr14:68729808:+ . NA TCGA-DD-AAE4-01A-11R-A41C-07 F5-SCYL3 2 8 chr1:169530786:- chr1:169888890:- . NA TCGA-DD-AAE4-01A-11R-A41C-07 MED9-NT5M 1 3 chr17:17477265:+ chr17:17344794:+ FRAMESHIFT NA TCGA-DD-AAE9-01A-11R-A41C-07 ATP7A-COX7B 5 17 chrX:77910835:+ chrX:77899477:+ . NA TCGA-DD-AAEA-01A-11R-A41C-07 ABCC2-CTNNA3 192 315 chr10:99784781:+ chr10:65920617:- INFRAME NA TCGA-DD-AAEE-01A-11R-A41C-07 ANKRD28-COLQ 17 29 chr3:15751750:- chr3:15466437:- INFRAME NA TCGA-DD-AAEG-01A-11R-A39D-07 CEBPZ-MAP4K3 5 9 chr2:37228949:- chr2:39250705:- FRAMESHIFT NA TCGA-DD-AAEG-01A-11R-A39D-07 HS2ST1-SH3GLB1 2 7 chr1:86915160:+ chr1:86719507:+ INFRAME NA TCGA-DD-AAEG-01A-11R-A39D-07 HAMP-GPI 2 5 chr19:35282667:+ chr19:34393248:+ INFRAME NA TCGA-DD-AAEG-01A-11R-A39D-07 TMEM143-DBP 1 4 chr19:48342530:- chr19:48631052:- INFRAME NA TCGA-DD-AAEH-01A-11R-A41C-07 ARMCX4-BTK 2 14 chrX:101419000:+ chrX:101371701:- . NA TCGA-DD-AAEH-01A-11R-A41C-07 GNPTG-HAGH 1 1 chr16:1352306:+ chr16:1809833:- FRAMESHIFT NA TCGA-DD-AAEI-01A-11R-A41C-07 TBC1D22A-DRAIC 1 8 chr22:46774235:+ chr15:69548354:+ . NA TCGA-DD-AAVP-01A-11R-A41C-07 UFSP2-CCDC110 2 3 chr4:185413726:- chr4:185445542:- INFRAME NA TCGA-DD-AAVR-01A-11R-A41C-07 CYP2C19-TBC1D12 1 3 chr10:94781997:+ chr10:94531202:+ FRAMESHIFT NA TCGA-DD-AAVR-01A-11R-A41C-07 MGST1-ADTRP 1 3 chr12:16357699:+ chr6:11723500:- INFRAME NA TCGA-DD-AAVV-01A-11R-A41C-07 FAM105A-DNAH5 5 28 chr5:14602332:+ chr5:13917256:- INFRAME NA TCGA-DD-AAVW-01A-11R-A41C-07 APOL6-CUX2 2 7 chr22:35648623:+ chr12:111334441:+ . NA TCGA-DD-AAVW-01A-11R-A41C-07 POLG-CGNL1 2 6 chr15:89323404:- chr15:57516780:+ INFRAME NA TCGA-DD-AAVZ-01A-11R-A41C-07 SLC20A2-TMIGD3 25 137 chr8:42541538:- chr1:111488867:- . NA TCGA-DD-AAW0-01A-11R-A41C-07 SOCS5-SLC8A1 3 5 chr2:46699449:+ chr2:40453349:- . NA TCGA-ED-A459-01A-11R-A266-07 HP-SAA1 1 31 chr16:72056243:+ chr11:18266264:+ . NA TCGA-ED-A459-01A-11R-A266-07 PLRG1-FGG 1 8 chr4:154545836:- chr4:154604354:- INFRAME NA TCGA-ED-A459-01A-11R-A266-07 ERMP1-PLGRKT 1 5 chr9:5805027:- chr9:5361888:- INFRAME NA TCGA-ED-A4XI-01A-11R-A266-07 ITIH2-TAF3 2 6 chr10:7713285:+ chr10:8009078:+ INFRAME NA TCGA-ED-A4XI-01A-11R-A266-07 ADCY9-JADE3 2 4 chr16:4113750:- chrX:46984884:+ . NA TCGA-ED-A4XI-01A-11R-A266-07 NT5DC1-DSE 1 5 chr6:116117945:+ chr6:116399198:+ . NA TCGA-ED-A627-01A-12R-A311-07 CCT3-IQGAP3 2 3 chr1:156324972:- chr1:156525552:- . NA TCGA-ED-A7PX-01A-51R-A352-07 TBC1D2B-CIB2 25 82 chr15:78054034:- chr15:78111276:- FRAMESHIFT NA TCGA-ED-A7PX-01A-51R-A352-07 UBAP2-KIF24 22 12 chr9:34048825:- chr9:34263172:- . NA TCGA-ED-A7PX-01A-51R-A352-07 SMYD2-PROX1 9 27 chr1:214327724:+ chr1:214035649:+ INFRAME NA TCGA-ED-A7PX-01A-51R-A352-07 SP2-KPNB1 5 11 chr17:47897927:+ chr17:47669678:+ . NA TCGA-ED-A7PX-01A-51R-A352-07 TANC2-MRC2 5 7 chr17:63009626:+ chr17:62664548:+ INFRAME NA TCGA-ED-A7PX-01A-51R-A352-07 KBTBD2-NT5C3A 2 5 chr7:32891536:- chr7:33035988:- . NA TCGA-ED-A7XO-01A-11R-A352-07 NECTIN2-CCL21 14 62 chr19:44846613:+ chr9:34709897:- INFRAME NA TCGA-ED-A7XO-01A-11R-A352-07 SCARB2-NIPSNAP1 15 48 chr4:76213427:- chr22:29561862:- FRAMESHIFT NA TCGA-ED-A7XO-01A-11R-A352-07 PC-MX2 3 35 chr11:66952430:- chr21:41390565:+ . NA TCGA-ED-A7XO-01A-11R-A352-07 ABHD6-FLNB 5 12 chr3:58237916:+ chr3:58118872:+ . NA TCGA-ED-A7XO-01A-11R-A352-07 MPP5-FAM71D 2 5 chr14:67241533:+ chr14:67203094:+ . NA TCGA-ED-A7XP-01A-11R-A352-07 MLPH-RAMP1 3 18 chr2:237493536:+ chr2:237911528:+ INFRAME NA TCGA-ED-A7XP-01A-11R-A352-07 CLU-MT1G 4 11 chr8:27598099:- chr16:56668033:- . NA TCGA-ED-A82E-01A-11R-A352-07 FAM172A-MCTP1 7 32 chr5:94050731:- chr5:95017484:- INFRAME NA TCGA-ED-A82E-01A-11R-A352-07 EDA-FAAH2 1 48 chrX:69616704:+ chrX:57292498:+ INFRAME NA TCGA-ED-A82E-01A-11R-A352-07 FGD4-CD4 9 10 chr12:32611283:+ chr12:6816056:+ FRAMESHIFT NA TCGA-ED-A82E-01A-11R-A352-07 SLC38A1-UNKL 3 16 chr12:46229153:- chr16:1403344:- INFRAME NA TCGA-ED-A82E-01A-11R-A352-07 RAB2B-AZIN1 1 9 chr14:21474867:- chr8:102858150:- . NA TCGA-ED-A82E-01A-11R-A352-07 POLR2F-EIF3L 2 2 chr22:37967170:+ chr22:37855565:+ INFRAME NA TCGA-ED-A97K-01A-21R-A38B-07 DPYD-RGS5 3 10 chr1:97883264:- chr1:163168368:- FRAMESHIFT NA TCGA-ED-A97K-01A-21R-A38B-07 HID1-DNAH17 2 5 chr17:74972591:- chr17:78510506:- INFRAME NA TCGA-EP-A12J-01A-11R-A131-07 STAU2-RALYL 23 19 chr8:73746783:- chr8:84873284:+ . NA TCGA-EP-A12J-01A-11R-A131-07 SSSCA1-FRMD8 2 4 chr11:65570970:+ chr11:65411242:+ INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 TCF25-ZC3H18 14 154 chr16:89900794:+ chr16:88631489:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 STK19-LY6G6D 22 63 chr6:31979553:+ chr6:31715502:+ FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 WWP1-LRRCC1 21 23 chr8:86342930:+ chr8:85141382:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 MTMR3-TSHZ2 16 23 chr22:29883359:+ chr20:53487144:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 ST7-FOXP2 9 26 chr7:116953691:+ chr7:114426502:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 RBFOX2-RAC2 6 15 chr22:35809780:- chr22:37226803:- FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 VPS53-SMG6 8 6 chr17:697418:- chr17:2085901:- INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 PPP2R5C-CCDC28B 6 7 chr14:101894560:+ chr1:32201913:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 KDM4C-INSL4 2 19 chr9:6814745:+ chr9:5233654:+ FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 AATF-LIG3 3 14 chr17:36990857:+ chr17:34998604:+ INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 BAZ1B-MLXIPL 2 18 chr7:73459536:- chr7:73599695:- FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 TXNDC15-LEAP2 3 12 chr5:134874530:+ chr5:132873950:+ FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 ZCCHC17-CCDC28B 1 19 chr1:31319166:+ chr1:32201913:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 GTPBP1-CDC42EP1 3 9 chr22:38706147:+ chr22:37566072:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 CTIF-C18orf25 3 7 chr18:48670744:+ chr18:46253697:+ FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 KIF23-PIAS1 3 7 chr15:69429213:+ chr15:68187542:+ INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 ZCCHC17-PPP2R5C 3 5 chr1:31319166:+ chr14:101894507:+ INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 DNMT3A-HADHA 2 7 chr2:25252194:- chr2:26215175:- INFRAME Likely Oncogenic NA TCGA-EP-A2KA-01A-11R-A180-07 PCCA-FARP1 2 7 chr13:100157340:+ chr13:98343762:+ INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 CPN1-ACTR1A 2 6 chr10:100063614:- chr10:102485733:- FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 WDR55-PAIP2 2 6 chr5:140665103:+ chr5:139363759:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 ACAP2-DLG1 2 4 chr3:195392090:- chr3:197051668:- FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 MGMT-DOCK1 2 4 chr10:129536377:+ chr10:127439027:+ INFRAME NA TCGA-EP-A2KA-01A-11R-A180-07 PPFIA1-MYEOV 1 8 chr11:70272436:+ chr11:69341510:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 PCCA-CLYBL 2 3 chr13:100112061:+ chr13:99772824:+ FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 CAMK1D-PROSER2 2 1 chr10:12349910:+ chr10:11851997:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 ST3GAL4-HYLS1 1 4 chr11:126356302:+ chr11:125899104:+ . NA TCGA-EP-A2KA-01A-11R-A180-07 MTF1-PABPC4 1 3 chr1:37857251:- chr1:39572586:- FRAMESHIFT NA TCGA-EP-A2KA-01A-11R-A180-07 YIPF1-USP24 1 2 chr1:53866200:- chr1:55097717:- INFRAME NA TCGA-EP-A2KC-01A-11R-A213-07 C3-HP 1 23 chr19:6694431:- chr16:72059117:+ INFRAME NA TCGA-FV-A23B-01A-11R-A16W-07 SERPINA1-FGG 1 30 chr14:94380871:- chr4:154605066:- FRAMESHIFT NA TCGA-FV-A23B-01A-11R-A16W-07 VPS4B-BCL2 1 9 chr18:63399242:- chr18:63128759:- FRAMESHIFT NA TCGA-FV-A2QR-01A-11R-A213-07 SPAG9-UBBP4 10 36 chr17:51079584:- chr17:22204087:+ . NA TCGA-FV-A3I0-01A-11R-A22L-07 DTNA-AQP4 7 14 chr18:34493514:+ chr18:26862596:- . NA TCGA-FV-A3I0-01A-11R-A22L-07 ARID1A-THSD7B 1 8 chr1:26732792:+ chr2:136882144:+ . Likely Oncogenic NA TCGA-FV-A3I1-01A-11R-A22L-07 TUSC3-KCTD1 1 5 chr8:15417305:+ chr18:26459925:- . NA TCGA-FV-A3I1-01A-11R-A22L-07 AGPS-ZNF385B 1 4 chr2:177505575:+ chr2:179544969:- FRAMESHIFT NA TCGA-FV-A3R3-01A-11R-A22L-07 SYF2-RHD 2 11 chr1:25232104:- chr1:25284573:+ FRAMESHIFT NA TCGA-FV-A495-01A-11R-A266-07 CAMKK2-HPD 6 39 chr12:121296638:- chr12:121840048:- . NA TCGA-FV-A495-01A-11R-A266-07 PSMA3-STRADA 1 46 chr14:58257998:+ chr17:63704047:- INFRAME NA TCGA-FV-A495-01A-11R-A266-07 SHH-KNG1 4 23 chr7:155803034:- chr3:186741522:+ FRAMESHIFT NA TCGA-FV-A495-01A-11R-A266-07 C16orf45-SMPDL3B 3 12 chr16:15434759:+ chr1:27958476:+ FRAMESHIFT NA TCGA-FV-A495-01A-11R-A266-07 MASP2-EXOSC10 3 4 chr1:11030176:- chr1:11077651:- FRAMESHIFT NA TCGA-FV-A496-01A-11R-A266-07 USP9X-ATP6AP2 8 66 chrX:41171958:+ chrX:40605561:+ INFRAME NA TCGA-FV-A496-01A-11R-A266-07 NPLOC4-ALYREF 3 48 chr17:81600341:- chr17:81890820:- INFRAME NA TCGA-FV-A496-01A-11R-A266-07 C4BPA-MAPKAPK2 5 15 chr1:207134592:+ chr1:206728710:+ FRAMESHIFT NA TCGA-FV-A496-01A-11R-A266-07 CHMP4B-CBFA2T2 7 7 chr20:33811658:+ chr20:33636640:+ INFRAME NA TCGA-FV-A496-01A-11R-A266-07 MAST3-MAP1S 2 15 chr19:18110741:+ chr19:17720936:+ . NA TCGA-FV-A496-01A-11R-A266-07 MYLK-PLXND1 2 13 chr3:123626818:- chr3:129578433:- INFRAME NA TCGA-FV-A496-01A-11R-A266-07 PFDN4-TSHZ2 2 8 chr20:54214458:+ chr20:53487144:+ . NA TCGA-FV-A496-01A-11R-A266-07 KCNN3-PBXIP1 1 6 chr1:154733003:- chr1:154951921:- INFRAME NA TCGA-FV-A496-01A-11R-A266-07 OGT-NONO 1 2 chrX:71554592:+ chrX:71296565:+ INFRAME NA TCGA-FV-A4ZP-01A-12R-A266-07 C22orf39-GNB1L 4 1 chr22:19447378:- chr22:19802216:- INFRAME NA TCGA-FV-A4ZQ-01A-11R-A266-07 IGHG1-RBP4 1 10 chr14:105742065:- chr10:93600971:- INFRAME NA TCGA-FV-A4ZQ-01A-11R-A266-07 BBX-ALCAM 1 3 chr3:107778519:+ chr3:105520067:+ INFRAME NA TCGA-G3-A25S-01A-11R-A16W-07 SGK2-SERINC2 1 2 chr20:43559159:+ chr1:31432967:+ . NA TCGA-G3-A25U-01A-11R-A16W-07 CPB2-ZC3H13 98 336 chr13:46073873:- chr13:45968028:- FRAMESHIFT NA TCGA-G3-A25U-01A-11R-A16W-07 XPR1-NME7 53 249 chr1:180632270:+ chr1:169169554:- INFRAME NA TCGA-G3-A25Y-01A-11R-A16W-07 KIF13B-SMTN 4 20 chr8:29071620:- chr22:31087965:+ FRAMESHIFT NA TCGA-G3-A3CH-01A-11R-A22L-07 DDX60L-CPE 1 5 chr4:168472455:- chr4:165484422:+ FRAMESHIFT NA TCGA-G3-A3CI-01A-11R-A213-07 SFPQ-TFEB 12 35 chr1:35189003:- chr6:41691235:- INFRAME NA TCGA-G3-A3CI-01A-11R-A213-07 FGB-HP 1 18 chr4:154568494:+ chr16:72059117:+ INFRAME NA TCGA-G3-A3CI-01A-11R-A213-07 AMBP-RBP4 1 8 chr9:114061424:- chr10:93594035:- INFRAME NA TCGA-G3-A5SL-01A-11R-A27V-07 CEP295-DEUP1 1 9 chr11:93661774:+ chr11:93371038:+ . NA TCGA-G3-A5SM-01A-12R-A28V-07 CLU-RBP4 1 10 chr8:27598460:- chr10:93594035:- FRAMESHIFT NA TCGA-G3-A5SM-01A-12R-A28V-07 C16orf62-C9 1 1 chr16:19601723:+ chr5:39285233:- INFRAME NA TCGA-G3-A7M5-01A-11R-A33R-07 CDKAL1-CRHR2 1 8 chr6:21108463:+ chr7:30656012:- INFRAME NA TCGA-G3-A7M7-01A-12R-A352-07 DDI2-C4BPB 38 101 chr1:15617808:+ chr1:207089482:+ . NA TCGA-G3-A7M7-01A-12R-A352-07 GDA-FAM69B 16 53 chr9:72149682:+ chr9:136717577:+ INFRAME NA TCGA-G3-A7M7-01A-12R-A352-07 LPP-AK1 10 59 chr3:188154021:+ chr9:127874649:- . NA TCGA-G3-A7M7-01A-12R-A352-07 CREB3L3-PKN3 10 25 chr19:4171175:+ chr9:128705303:+ INFRAME NA TCGA-G3-A7M7-01A-12R-A352-07 STAT3-TPM3 8 25 chr17:42345559:- chr1:154176248:- INFRAME NA TCGA-G3-A7M7-01A-12R-A352-07 CHKB-CDK11B 5 2 chr22:50580198:- chr1:1635662:- . NA TCGA-G3-A7M7-01A-12R-A352-07 STAT3-C1orf43 2 3 chr17:42345559:- chr1:154207648:- INFRAME NA TCGA-G3-A7M7-01A-12R-A352-07 RALGAPA2-PCK1 1 4 chr20:20712375:- chr20:57561372:+ . NA TCGA-G3-A7M7-01A-12R-A352-07 MAP2K2-ZDHHC12 1 3 chr19:4097279:- chr9:128722574:- FRAMESHIFT NA TCGA-G3-A7M8-01A-11R-A33R-07 AR-NR4A3 1 8 chrX:67643407:+ chr9:99825659:+ . NA TCGA-G3-A7M9-01A-23R-A352-07 RELN-SLC25A26 1 8 chr7:103489742:- chr3:66369478:+ INFRAME NA TCGA-G3-A7M9-01A-23R-A352-07 UBAC2-ASNS 1 8 chr13:99244624:+ chr7:97869179:- . NA TCGA-G3-AAUZ-01A-11R-A38B-07 C1S-NXPH4 24 40 chr12:7060877:+ chr12:57224878:+ . NA TCGA-G3-AAUZ-01A-11R-A38B-07 TMPRSS2-PHF12 2 5 chr21:41488394:- chr17:28908881:- INFRAME Likely Oncogenic NA TCGA-G3-AAUZ-01A-11R-A38B-07 METAP2-VEZT 1 6 chr12:95496098:+ chr12:95296051:+ INFRAME NA TCGA-G3-AAV1-01A-11R-A38B-07 EEF2K-VWA3A 3 16 chr16:22225975:+ chr16:22146236:+ INFRAME NA TCGA-G3-AAV3-01A-11R-A37K-07 UGT1A6-JPH3 2 6 chr2:233693865:+ chr16:87689646:+ FRAMESHIFT NA TCGA-G3-AAV7-01A-11R-A38B-07 GNPAT-TRIM67 5 12 chr1:231241456:+ chr1:231200148:+ INFRAME NA TCGA-G3-AAV7-01A-11R-A38B-07 YEATS4-CPSF6 1000 1000 chr12:69370975:+ chr12:69269512:+ FRAMESHIFT NA TCGA-GJ-A3OU-01A-31R-A38B-07 FDFT1-CLVS1 2 5 chr8:11809850:+ chr8:61299677:+ . NA TCGA-GJ-A6C0-01A-12R-A311-07 DCXR-SIRT7 5 33 chr17:82036721:- chr17:81915681:- INFRAME NA TCGA-GJ-A6C0-01A-12R-A311-07 USP8-CLPTM1L 4 37 chr15:50499098:+ chr5:1325816:- . NA TCGA-GJ-A6C0-01A-12R-A311-07 CNIH4-VPS39 5 16 chr1:224365991:+ chr15:42166913:- FRAMESHIFT NA TCGA-GJ-A6C0-01A-12R-A311-07 LIPC-CCNA2 4 18 chr15:58410818:+ chr4:121821091:- . NA TCGA-GJ-A6C0-01A-12R-A311-07 SETDB1-GABPB2 1 29 chr1:150930118:+ chr1:151117392:+ INFRAME NA TCGA-GJ-A6C0-01A-12R-A311-07 SMIM14-RFC1 3 16 chr4:39638739:- chr4:39312931:- . NA TCGA-GJ-A6C0-01A-12R-A311-07 PCYT2-RAC3 3 15 chr17:81902179:- chr17:82032771:+ . NA TCGA-GJ-A6C0-01A-12R-A311-07 IL17RC-TTLL3 1 7 chr3:9932703:+ chr3:9818822:+ INFRAME NA TCGA-GJ-A6C0-01A-12R-A311-07 LRAT-VTI1A 1 4 chr4:154636396:+ chr10:112815290:+ . NA TCGA-GJ-A6C0-01A-12R-A311-07 CEBPG-GPATCH1 1 1 chr19:33373895:+ chr19:33113767:+ . NA TCGA-GJ-A9DB-01A-11R-A37K-07 PSPC1-METTL21C 17 65 chr13:19782386:- chr13:102687057:- INFRAME NA TCGA-GJ-A9DB-01A-11R-A37K-07 PPP2R5E-MBIP 2 2 chr14:63539529:- chr14:36314915:- FRAMESHIFT NA TCGA-HP-A5MZ-01A-21R-A27V-07 PLRG1-FGG 1 1 chr4:154544445:- chr4:154606982:- FRAMESHIFT NA TCGA-HP-A5N0-01A-11R-A28V-07 POP1-TATDN1 3 34 chr8:98134659:+ chr8:124488696:- FRAMESHIFT NA TCGA-HP-A5N0-01A-11R-A28V-07 ZNF438-RFTN1 1 7 chr10:30984369:- chr3:16434037:- . NA TCGA-K7-AAU7-01A-11R-A38B-07 ARNTL2-PPFIBP1 21 38 chr12:27368412:+ chr12:27578152:+ . NA TCGA-K7-AAU7-01A-11R-A38B-07 MECP2-F8 1 6 chrX:154092184:- chrX:154957171:- FRAMESHIFT NA TCGA-KR-A7K2-01A-12R-A33R-07 ERBB2-PPP1R1B 8 21 chr17:39727547:+ chr17:39635607:+ INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 KDM4B-DKKL1 46 110 chr19:5047669:+ chr19:49374717:+ FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 RAD9A-MUS81 10 77 chr11:67393787:+ chr11:65865254:+ FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 CDC27-SNF8 5 71 chr17:47189146:- chr17:48941062:- INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 DNM2-ANGPTL4 7 49 chr19:10718403:+ chr19:8373705:+ FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 ASPH-EIF4EBP1 7 13 chr8:61517528:- chr8:38057081:+ FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 DDX17-ENTHD1 3 25 chr22:38493710:- chr22:39765609:- INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 DUSP10-SUSD4 4 13 chr1:221738934:- chr1:223268675:- INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 TFB2M-ZNF124 6 3 chr1:246548545:- chr1:247123871:- FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 PLCL2-TSEN2 2 17 chr3:16885366:+ chr3:12519059:+ INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 RAB17-HDAC4 4 8 chr2:237585998:- chr2:239054833:- FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 PIK3AP1-AVPI1 4 7 chr10:96648659:- chr10:97678025:- FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 RAB6A-GDPD5 2 8 chr11:73760566:- chr11:75490320:- . NA TCGA-KR-A7K8-01A-11R-A33J-07 CTIF-KATNAL2 1 9 chr18:48670744:+ chr18:47046457:+ INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 CD109-KCNQ5-IT1 1 7 chr6:73803301:+ chr6:72677095:+ . NA TCGA-KR-A7K8-01A-11R-A33J-07 FGD4-VPS13D 1 7 chr12:32582467:+ chr1:12455998:+ INFRAME NA TCGA-KR-A7K8-01A-11R-A33J-07 S100A13-GBA 1 5 chr1:153626320:- chr1:155241180:- . NA TCGA-KR-A7K8-01A-11R-A33J-07 TM9SF3-AVPI1 1 3 chr10:96559659:- chr10:97678025:- FRAMESHIFT NA TCGA-KR-A7K8-01A-11R-A33J-07 RORC-S100A7 1 1 chr1:151829429:- chr1:153459030:- . NA TCGA-LG-A6GG-01A-11R-A311-07 TF-HP 1 45 chr3:133754671:+ chr16:72059114:+ INFRAME NA TCGA-LG-A9QC-01A-11R-A37K-07 RBFOX2-EEF2KMT 10 31 chr22:36028240:- chr16:5085732:- FRAMESHIFT NA TCGA-LG-A9QC-01A-11R-A37K-07 DUS1L-CCDC57 3 4 chr17:82065613:- chr17:82134194:- . NA TCGA-LG-A9QC-01A-11R-A37K-07 PPL-APOL3 2 6 chr16:4888978:- chr22:36142058:- FRAMESHIFT NA TCGA-LG-A9QC-01A-11R-A37K-07 PRKCA-EFNA3 2 5 chr17:66306127:+ chr1:155085091:+ FRAMESHIFT NA TCGA-MI-A75G-01A-11R-A32O-07 SLC8B1-IQCD 7 31 chr12:113332723:- chr12:113200813:- INFRAME NA TCGA-MR-A520-01A-11R-A266-07 SFPQ-TFEB 8 51 chr1:35189003:- chr6:41691235:- INFRAME NA TCGA-MR-A520-01A-11R-A266-07 FGB-FGA 1 23 chr4:154563132:+ chr4:154589562:- INFRAME NA TCGA-MR-A520-01A-11R-A266-07 TFEB-ADAMTS9-AS2 2 10 chr6:41735350:- chr3:64799465:+ . NA TCGA-MR-A520-01A-11R-A266-07 BAAT-ALDOB 1 7 chr9:101383470:- chr9:101430897:- . NA TCGA-MR-A520-01A-11R-A266-07 EPB41-USP49 1 3 chr1:28893837:+ chr6:41807011:- . NA TCGA-MR-A8JO-01A-12R-A36F-07 DNAJB1-PRKACA 23 169 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-MR-A8JO-01A-12R-A36F-07 MRC1-ALOX5 27 72 chr10:17894312:+ chr10:45382483:+ FRAMESHIFT NA TCGA-MR-A8JO-01A-12R-A36F-07 TOP3A-ANAPC16 4 7 chr17:18282698:- chr10:72230366:+ FRAMESHIFT NA TCGA-MR-A8JO-01A-12R-A36F-07 CPS1-MAP2 2 10 chr2:210590234:+ chr2:209723595:+ INFRAME NA TCGA-MR-A8JO-01A-12R-A36F-07 SEC61A1-EEFSEC 1000 1000 chr3:128070706:+ chr3:128246836:+ . NA TCGA-NI-A4U2-01A-11R-A28V-07 IL13RA1-DOCK11 13 54 chrX:118766976:+ chrX:118662686:+ INFRAME NA TCGA-NI-A4U2-01A-11R-A28V-07 FBXW11-NUP210L 2 37 chr5:171996890:- chr1:154027597:- . NA TCGA-NI-A4U2-01A-11R-A28V-07 SLC4A2-AOC1 1 28 chr7:151075508:+ chr7:150856455:+ . NA TCGA-NI-A4U2-01A-11R-A28V-07 STRN-SULT6B1 3 6 chr2:36899523:- chr2:37188547:- INFRAME NA TCGA-NI-A8LF-01A-11R-A36F-07 LRRC61-DOCK4 3 2 chr7:150326010:+ chr7:111989163:- . NA TCGA-NI-A8LF-01A-11R-A36F-07 LCOR-RBM20 1 6 chr10:96833479:+ chr10:110780801:+ . NA TCGA-NI-A8LF-01A-11R-A36F-07 LYSMD2-MYO5A 1 4 chr15:51737350:- chr15:52321509:- INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 TRIT1-ADH1C 17 111 chr1:39883318:- chr4:99347144:- INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 CLIC4-ARFGAP3 14 40 chr1:24745625:+ chr22:42847632:- INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 PCCA-ZIC2 7 35 chr13:100102960:+ chr13:99984946:+ INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 KIAA1109-CCNA2 5 25 chr4:122154112:+ chr4:121821091:- . NA TCGA-PD-A5DF-01A-11R-A27V-07 TRIT1-ADH1B 10 2 chr1:39883318:- chr4:99318886:- INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 CLIC4-PACSIN2 7 11 chr1:24745625:+ chr22:42847632:- . NA TCGA-PD-A5DF-01A-11R-A27V-07 C16orf70-GNAO1 3 18 chr16:67126042:+ chr16:56328631:+ INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 BCL2L2-RNF212B 3 14 chr14:23308199:+ chr14:23270600:+ INFRAME NA TCGA-PD-A5DF-01A-11R-A27V-07 RAI14-SCP2 2 16 chr5:34656475:+ chr1:52974769:+ . NA TCGA-PD-A5DF-01A-11R-A27V-07 PCCA-CLYBL 1 11 chr13:100235878:+ chr13:99858861:+ FRAMESHIFT NA TCGA-PD-A5DF-01A-11R-A27V-07 ZNF512B-SEPT1 1 4 chr20:63961309:- chr16:30383014:- . NA TCGA-PD-A5DF-01A-11R-A27V-07 ENTPD6-TBC1D10B 1 3 chr20:25218614:+ chr16:30365594:- FRAMESHIFT NA TCGA-PD-A5DF-01A-11R-A27V-07 ZNF341-C20orf144 1000 1000 chr20:33767041:+ chr20:33664828:+ . NA TCGA-QA-A7B7-01A-11R-A32O-07 MTSS1-WASHC5 79 628 chr8:124585087:- chr8:125028707:- FRAMESHIFT NA TCGA-QA-A7B7-01A-11R-A32O-07 FOXO1-MRPS31 13 50 chr13:40665583:- chr13:40729601:- FRAMESHIFT NA TCGA-QA-A7B7-01A-11R-A32O-07 MCRS1-C1QL4 7 21 chr12:49563001:- chr12:49333233:- FRAMESHIFT NA TCGA-RC-A6M3-01A-11R-A32O-07 DNAJB1-PRKACA 74 343 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-RC-A6M3-01A-11R-A32O-07 TGFBR1-COL15A1 7 35 chr9:99147784:+ chr9:99015417:+ INFRAME Likely Oncogenic NA TCGA-RC-A6M3-01A-11R-A32O-07 DSCR3-CTSH 5 11 chr21:37267238:- chr15:78939171:- FRAMESHIFT NA TCGA-RC-A6M3-01A-11R-A32O-07 PPCDC-LMAN1L 6 3 chr15:75023626:+ chr15:74812950:+ . NA TCGA-RC-A6M3-01A-11R-A32O-07 DENND4A-DPP8 3 13 chr15:65729072:- chr15:65512564:- FRAMESHIFT NA TCGA-RC-A6M3-01A-11R-A32O-07 ONECUT1-REC114 3 10 chr15:52757086:- chr15:73540485:+ . NA TCGA-RC-A6M3-01A-11R-A32O-07 HMG20A-SCAMP5 2 5 chr15:77421004:+ chr15:75011792:+ . NA TCGA-RC-A6M3-01A-11R-A32O-07 TSSK3-HDAC1 2 4 chr1:32353541:+ chr1:32316665:+ . NA TCGA-RC-A6M3-01A-11R-A32O-07 SIM2-GRIK1 1 4 chr21:36699921:+ chr21:29694063:- INFRAME NA TCGA-RC-A6M4-01A-11R-A32O-07 HABP2-LAPTM4B 60 419 chr10:113553190:+ chr8:97805353:+ INFRAME NA TCGA-RC-A6M4-01A-11R-A32O-07 CYP4F12-PTGER1 9 180 chr19:15678405:+ chr19:14474337:- . NA TCGA-RC-A6M4-01A-11R-A32O-07 FHIT-TKT 4 4 chr3:60821919:- chr3:53242242:- . NA TCGA-RC-A6M5-01A-11R-A32O-07 DNAJB1-PRKACA 143 688 chr19:14518139:- chr19:14107409:- INFRAME Oncogenic NA TCGA-RC-A6M5-01A-11R-A32O-07 ENPP1-CDX1 27 94 chr6:131860506:+ chr5:150182768:+ FRAMESHIFT NA TCGA-RC-A6M6-01A-11R-A32O-07 ST7-COG5 70 351 chr7:116953691:+ chr7:107412632:- INFRAME NA TCGA-RC-A6M6-01A-11R-A32O-07 SLC39A14-FGF17 12 162 chr8:22395079:+ chr8:22042860:+ . NA TCGA-RC-A6M6-01A-11R-A32O-07 NRCAM-CFTR 8 34 chr7:108456243:- chr7:117665459:+ . NA TCGA-RC-A6M6-01A-11R-A32O-07 PNPLA8-CFTR 7 17 chr7:108487759:- chr7:117642438:+ INFRAME NA TCGA-RC-A6M6-01A-11R-A32O-07 ACTR3C-GIMAP2 5 9 chr7:150293312:- chr7:150687052:+ . NA TCGA-RC-A6M6-01A-11R-A32O-07 OXR1-MET 2 14 chr8:106726309:+ chr7:116771498:+ INFRAME NA TCGA-RC-A6M6-01A-11R-A32O-07 MTUS1-FGL1 1 2 chr8:17713214:- chr8:17885571:- . NA TCGA-RC-A7SB-01A-21R-A352-07 TEX2-ANKFN1 3 21 chr17:64263168:- chr17:56482356:+ . NA TCGA-RC-A7SF-01A-11R-A352-07 DICER1-EIF5 4 4 chr14:95157230:- chr14:103337116:+ . Likely Oncogenic NA TCGA-RC-A7SK-01A-11R-A352-07 RBCK1-TRIB3 4 4 chr20:417930:+ chr20:388011:+ INFRAME NA TCGA-RC-A7SK-01A-11R-A352-07 ASAP1-KHDRBS3 1 2 chr8:130358017:- chr8:135521237:+ FRAMESHIFT NA TCGA-RG-A7D4-01A-12R-A33R-07 RUNX1T1-IGKJ3 208 0 chr8:92010620:- chr2:88861257:- . NA TCGA-UB-A7MA-01A-11R-A33R-07 GALNT16-RAD51B 6 32 chr14:69260467:+ chr14:68291884:+ INFRAME NA TCGA-UB-A7MA-01A-11R-A33R-07 SUGP1-PEPD 8 18 chr19:19316422:- chr19:33413643:- INFRAME NA TCGA-UB-A7MA-01A-11R-A33R-07 DDX49-NCAN 5 24 chr19:18920703:+ chr19:19216947:+ . NA TCGA-UB-A7MA-01A-11R-A33R-07 UBAP2L-TDRKH 6 9 chr1:154220975:+ chr1:151783049:- . NA TCGA-UB-A7MA-01A-11R-A33R-07 ARHGAP23-TSSK6 4 6 chr17:38500628:+ chr19:19512542:- . NA TCGA-UB-A7MA-01A-11R-A33R-07 DST-EYS 1 6 chr6:56526361:- chr6:65495993:- . NA TCGA-UB-A7MA-01A-11R-A33R-07 ITGAV-IFT172 1 4 chr2:186602151:+ chr2:27485503:- FRAMESHIFT NA TCGA-UB-A7MA-01A-11R-A33R-07 MYO1B-ITGAV 1 2 chr2:191245611:+ chr2:186622339:+ . NA TCGA-UB-A7MB-01A-11R-A33R-07 PPP4R3B-PNPT1 8 60 chr2:55603978:- chr2:55637599:- INFRAME NA TCGA-UB-A7MB-01A-11R-A33R-07 GLIS3-GOLM1 5 9 chr9:4286038:- chr9:86046572:- INFRAME NA TCGA-UB-A7MB-01A-11R-A33R-07 MARK3-DIO3OS 4 7 chr14:103480490:+ chr14:101552754:- . NA TCGA-UB-A7MB-01A-11R-A33R-07 SLC35E1-EPS15L1 1 9 chr19:16566532:- chr19:16418104:- FRAMESHIFT NA TCGA-UB-A7MC-01A-11R-A33R-07 CYP2E1-GLUL 1 43 chr10:133532284:+ chr1:182385556:- INFRAME NA TCGA-UB-A7MC-01A-11R-A33R-07 PBXIP1-GBAP1 2 27 chr1:154953671:- chr1:155218049:- . NA TCGA-UB-A7MC-01A-11R-A33R-07 MT1G-PRKAR1A 8 1 chr16:56666952:- chr17:68524117:+ . NA TCGA-UB-A7ME-01A-11R-A33J-07 RPL37-TTC33 35 39 chr5:40832442:- chr5:40513069:- . NA TCGA-UB-A7ME-01A-11R-A33J-07 PARN-WT1-AS 5 16 chr16:14599904:- chr11:32452021:+ . NA TCGA-WJ-A86L-01A-12R-A39D-07 TFRC-EBNA1BP2 155 88 chr3:196060180:- chr1:43261918:- . NA TCGA-WJ-A86L-01A-12R-A39D-07 CPS1-PLCD4 8 65 chr2:210579770:+ chr2:218615707:+ . NA TCGA-WJ-A86L-01A-12R-A39D-07 GPAM-GUCY2GP 8 15 chr10:112172182:- chr10:112339186:- . NA TCGA-WJ-A86L-01A-12R-A39D-07 PITPNM2-SBNO1 6 23 chr12:122983998:- chr12:123292567:- . NA TCGA-WJ-A86L-01A-12R-A39D-07 ALDH1A1-MIR4290HG 4 30 chr9:72905958:- chr9:90026099:- . NA TCGA-WJ-A86L-01A-12R-A39D-07 LDLRAD1-TMEM59 7 8 chr1:54010282:- chr1:54032305:- FRAMESHIFT NA TCGA-WJ-A86L-01A-12R-A39D-07 MTMR3-CABP7 3 16 chr22:29957088:+ chr22:29727662:+ . NA TCGA-WJ-A86L-01A-12R-A39D-07 NHEJ1-DNPEP 1 6 chr2:219125471:- chr2:219387163:- . NA TCGA-WJ-A86L-01A-12R-A39D-07 ABHD17A-AP3D1 1 1 chr19:1881235:- chr19:2138714:- FRAMESHIFT NA TCGA-WX-AA47-01A-11R-A39D-07 ADCY10-MPC2 1 2 chr1:167913976:- chr1:167920631:- . NA TCGA-XR-A8TD-01A-12R-A39D-07 ADAP1-METTL2B 3 4 chr7:954396:- chr7:128501762:+ INFRAME NA TCGA-XR-A8TE-01A-11R-A36F-07 IGF2-REG3A 3 41 chr11:2138761:- chr2:79157119:- . NA TCGA-XR-A8TE-01A-11R-A36F-07 BCAM-REG3A 1000 1000 chr19:44821047:+ chr2:79158751:- . NA TCGA-XR-A8TF-01A-11R-A36F-07 MGMT-SNORA31 11 20 chr10:129467296:+ chr14:41594478:+ . NA TCGA-XR-A8TF-01A-11R-A36F-07 POLD2-GCK 5 1 chr7:44123511:- chr7:44153463:- FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 TUFT1-SCNM1 11 46 chr1:151540426:+ chr1:151166471:+ INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 FAM222B-HAO2 8 56 chr17:28790378:- chr1:119392110:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 TAOK1-RPL23A 15 24 chr17:29391024:+ chr17:28720707:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 SEC24A-JADE2 8 46 chr5:134718173:+ chr5:134576768:+ INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 DIAPH2-NRP2 12 20 chrX:96685190:+ chr2:205792235:+ FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 KLF10-NUBPL 7 21 chr8:102655566:- chr14:31526052:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 SYNJ2-GTF2H5 8 15 chr6:158071794:+ chr6:158191977:+ FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 HSPA9-DDX19A 3 34 chr5:138566626:- chr16:70371372:+ INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 SLC2A2-EIF5A2 4 28 chr3:171002576:- chr3:170894423:- INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 BAZ1B-BCL7B 5 17 chr7:73465439:- chr7:73552242:- INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 KIFC3-CNGB1 4 15 chr16:57862729:- chr16:57940321:- FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 HNRNPL-CCER2 2 15 chr19:38843842:- chr19:38909325:- FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 NPIPB14P-WDR88 3 9 chr16:69982350:- chr19:33137677:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 PDXDC2P-WDR88 3 9 chr16:69982350:- chr19:33137677:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 EPAS1-SYPL2 3 8 chr2:46297937:+ chr1:109467059:+ FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 CORO1C-PACRG 2 10 chr12:108731429:- chr6:163314827:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 FAM35A-PAPSS2 2 10 chr10:87096989:+ chr10:87741235:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 LSR-GRAMD1A 2 8 chr19:35262692:+ chr19:35009119:+ FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 DDA1-MYO9B 1 10 chr19:17315995:+ chr19:17159395:+ INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 POMT1-PLPP7 3 2 chr9:131511467:+ chr9:131307923:+ FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 SPATS2L-AOX3P 1 9 chr2:200306601:+ chr2:200691872:+ . NA TCGA-XR-A8TG-01A-11R-A36F-07 BCAM-IGSF23 2 4 chr19:44814760:+ chr19:44627420:+ INFRAME NA TCGA-XR-A8TG-01A-11R-A36F-07 HTRA1-ARMS2 2 2 chr10:122462124:+ chr10:122456907:+ FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 PLEC-SLC10A1 1 2 chr8:143973403:- chr14:69779360:- FRAMESHIFT NA TCGA-XR-A8TG-01A-11R-A36F-07 CYP3A43-ZSCAN25 1000 1000 chr7:99828186:+ chr7:99629370:+ INFRAME NA TCGA-ZP-A9CZ-01A-11R-A38B-07 CLSTN3-C1S 21 123 chr12:7136391:+ chr12:7061752:+ . NA TCGA-ZP-A9CZ-01A-11R-A38B-07 GTF2F2-GPC5 9 35 chr13:45120721:+ chr13:92144830:+ INFRAME NA TCGA-ZP-A9D0-01A-11R-A37K-07 USP45-ASCC3 5 24 chr6:99464604:- chr6:100540387:- INFRAME NA TCGA-ZP-A9D0-01A-11R-A37K-07 FGA-CPS1 1 7 chr4:154585538:- chr2:210677887:+ INFRAME NA TCGA-ZP-A9D0-01A-11R-A37K-07 SOX13-PSD2 1 7 chr1:204073711:+ chr5:139809391:+ . NA TCGA-ZP-A9D0-01A-11R-A37K-07 CYC1-FGA 1 1 chr8:144096250:+ chr4:154586918:- INFRAME NA TCGA-ZP-A9D4-01A-11R-A37K-07 UBLCP1-CSNK1A1 1 43 chr5:159269069:+ chr5:149496860:- INFRAME NA TCGA-ZP-A9D4-01A-11R-A37K-07 FBXL17-SPINK14 1 3 chr5:108348399:- chr5:148174234:+ INFRAME NA TCGA-ZS-A9CD-01A-11R-A37K-07 PHF23-TOM1 6 7 chr17:7239246:- chr22:35345725:+ FRAMESHIFT NA TCGA-ZS-A9CD-01A-11R-A37K-07 CCDC187-INPP5E 4 12 chr9:136292161:- chr9:136429807:- FRAMESHIFT NA TCGA-ZS-A9CD-01A-11R-A37K-07 RAB40B-YBX2 2 12 chr17:82698455:- chr17:7290535:- FRAMESHIFT NA TCGA-ZS-A9CE-01A-11R-A37K-07 VTN-SERPINC1 1 11 chr17:28369289:- chr1:173909942:- INFRAME NA TCGA-ZS-A9CF-01A-11R-A38B-07 DNM2-RELB 24 51 chr19:10718403:+ chr19:45034244:+ FRAMESHIFT NA TCGA-ZS-A9CF-01A-11R-A38B-07 EIF2AK1-GCK 15 52 chr7:6054546:- chr7:44150064:- FRAMESHIFT NA TCGA-ZS-A9CF-01A-11R-A38B-07 ALDH1A1-FXYD1 11 26 chr9:72924019:- chr19:35140076:+ . NA TCGA-ZS-A9CF-01A-11R-A38B-07 CAPN12-LGALS7 9 31 chr19:38741777:- chr19:38773103:- FRAMESHIFT NA TCGA-ZS-A9CF-01A-11R-A38B-07 NMD3-USP40 4 46 chr3:161235212:+ chr2:233498612:- INFRAME NA TCGA-ZS-A9CF-01A-11R-A38B-07 PRR14L-POLD4 7 30 chr22:31749993:- chr11:67353077:- . NA TCGA-ZS-A9CF-01A-11R-A38B-07 C19orf60-NT5DC2 2 36 chr19:18588900:+ chr3:52529334:- INFRAME NA TCGA-ZS-A9CF-01A-11R-A38B-07 CYP2C18-HELLS 4 26 chr10:94706960:+ chr10:94571388:+ INFRAME NA TCGA-ZS-A9CF-01A-11R-A38B-07 TRIM7-BICDL1 3 26 chr5:181200534:- chr12:119998532:+ . NA TCGA-ZS-A9CF-01A-11R-A38B-07 EFNA1-ADAM15 5 17 chr1:155131634:+ chr1:155062460:+ FRAMESHIFT NA TCGA-ZS-A9CF-01A-11R-A38B-07 PHACTR4-SESN2 2 18 chr1:28369825:+ chr1:28269183:+ . NA TCGA-ZS-A9CF-01A-11R-A38B-07 DDX23-RND1 4 9 chr12:48852084:- chr12:48862118:- . NA TCGA-ZS-A9CF-01A-11R-A38B-07 TEAD1-ZCCHC8 1 16 chr11:12674834:+ chr12:122482695:- FRAMESHIFT NA TCGA-ZS-A9CF-01A-11R-A38B-07 ACOT12-SSBP2 2 5 chr5:81335768:- chr5:81489309:- FRAMESHIFT NA TCGA-ZS-A9CF-01A-11R-A38B-07 BORCS7-WBP1L 1 9 chr10:102862932:+ chr10:102809893:+ . NA TCGA-ZS-A9CF-01A-11R-A38B-07 CS-DGKD 1 3 chr12:56300160:- chr2:233434380:+ INFRAME NA TCGA-ZS-A9CF-01A-11R-A38B-07 RALY-WDR53 1 2 chr20:34072205:+ chr3:196554807:- FRAMESHIFT NA TCGA-ZS-A9CG-01A-11R-A37K-07 FLOT2-RAD51B 1 11 chr17:28897526:- chr14:68611006:+ INFRAME NA TCGA-05-4244-01A-01R-1107-07 TOP1-CDH4 43 78 chr20:41029455:+ chr20:61743563:+ INFRAME Likely Oncogenic NA TCGA-05-4244-01A-01R-1107-07 DLGAP4-PROCR 23 37 chr20:36465367:+ chr20:35215893:+ . NA TCGA-05-4244-01A-01R-1107-07 NCOA6-TCFL5 2 6 chr20:34736690:- chr20:62842097:- FRAMESHIFT NA TCGA-05-4249-01A-01R-1107-07 ATP11A-MCF2L 11 14 chr13:112690455:+ chr13:112902199:+ . NA TCGA-05-4250-01A-01R-1107-07 TMTC1-ERGIC2 6 19 chr12:29751666:- chr12:29371670:- . NA TCGA-05-4250-01A-01R-1107-07 SMYD3-EDARADD 1 7 chr1:246507054:- chr1:236409216:+ FRAMESHIFT NA TCGA-05-4382-01A-01R-1206-07 CSNK1E-SPRR3 4 18 chr22:38298786:- chr1:153001754:+ . NA TCGA-05-4382-01A-01R-1206-07 UNC13B-TAF7L 2 10 chr9:35162305:+ chrX:101269237:- FRAMESHIFT NA TCGA-05-4382-01A-01R-1206-07 COQ6-ACOT4 2 5 chr14:73961903:+ chr14:73595049:+ INFRAME NA TCGA-05-4382-01A-01R-1206-07 ZNF229-PPP1R13L 1 9 chr19:44432222:- chr19:45402124:- . NA TCGA-05-4382-01A-01R-1206-07 UAP1-MDM2 1 4 chr1:162561777:+ chr12:68809208:+ . NA TCGA-05-4389-01A-01R-1206-07 ZNF260-SCGB2B2 11 68 chr19:36525155:- chr19:34593599:- . NA TCGA-05-4389-01A-01R-1206-07 RAPGEF2-DDX60L 15 12 chr4:159104231:+ chr4:168537786:- . NA TCGA-05-4389-01A-01R-1206-07 MIR4435-2HG-AFF3 7 10 chr2:111494885:- chr2:100142595:- . NA TCGA-05-4389-01A-01R-1206-07 ATP6V1E1-BID 1 3 chr22:17612812:- chr22:17744013:- INFRAME NA TCGA-05-4390-01A-02R-1755-07 PPP3CA-RASGEF1B 1 20 chr4:101108954:- chr4:81602922:- INFRAME NA TCGA-05-4395-01A-01R-1206-07 NPC1-FGD4 14 22 chr18:23544960:- chr12:32598497:+ INFRAME NA TCGA-05-4395-01A-01R-1206-07 ANKRD12-PTPRM 3 29 chr18:9137873:+ chr18:8394476:+ . NA TCGA-05-4395-01A-01R-1206-07 PEX14-KIF1B 8 4 chr1:10475002:+ chr1:10374316:+ FRAMESHIFT NA TCGA-05-4395-01A-01R-1206-07 TXNDC11-RORA 4 7 chr16:11721577:- chr15:61176456:- INFRAME NA TCGA-05-4395-01A-01R-1206-07 CLN6-C15orf59 2 13 chr15:68229502:- chr15:73740642:- FRAMESHIFT NA TCGA-05-4395-01A-01R-1206-07 RALB-URM1 2 2 chr2:120252980:+ chr9:128387816:+ . NA TCGA-05-4395-01A-01R-1206-07 SLC25A13-CHAMP1 1 5 chr7:96131743:- chr13:114321110:+ . NA TCGA-05-4396-01A-21R-1858-07 MYO10-DNAH5 1 6 chr5:16877609:- chr5:13931244:- INFRAME NA TCGA-05-4397-01A-01R-1206-07 PDXK-LCA5L 5 27 chr21:43749080:+ chr21:39429211:- . NA TCGA-05-4397-01A-01R-1206-07 RASA1-RAPGEF6 4 10 chr5:87268990:+ chr5:131446703:- INFRAME Likely Oncogenic NA TCGA-05-4398-01A-01R-1206-07 STAT4-ACKR3 32 156 chr2:191146613:- chr2:236580440:+ . NA TCGA-05-4398-01A-01R-1206-07 SYPL1-AKR1D1 40 117 chr7:106097690:- chr7:138097866:+ INFRAME NA TCGA-05-4398-01A-01R-1206-07 ATP2B4-ERBB4 7 33 chr1:203627219:+ chr2:212124903:- . Likely Oncogenic NA TCGA-05-4398-01A-01R-1206-07 PRCC-MPTX1 5 24 chr1:156768239:+ chr1:159276507:+ . NA TCGA-05-4398-01A-01R-1206-07 EXOC4-PTAFR 6 18 chr7:133630141:+ chr1:28151059:- . NA TCGA-05-4398-01A-01R-1206-07 CLPTM1-RPS5 3 14 chr19:44955467:+ chr19:58393359:+ INFRAME NA TCGA-05-4398-01A-01R-1206-07 FMN1-SNRPN 1 7 chr15:33008014:- chr15:24886516:+ . NA TCGA-05-4398-01A-01R-1206-07 BRWD1-HUNK 1 3 chr21:39269899:- chr21:31968250:+ FRAMESHIFT NA TCGA-05-4402-01A-01R-1206-07 CD2AP-NFKBIE 15 53 chr6:47478248:+ chr6:44260539:- INFRAME NA TCGA-05-4402-01A-01R-1206-07 LPCAT1-TERT 8 25 chr5:1523710:- chr5:1282624:- FRAMESHIFT NA TCGA-05-4402-01A-01R-1206-07 ZNF644-PTGER3 4 30 chr1:91021689:- chr1:70852859:- . NA TCGA-05-4402-01A-01R-1206-07 IL34-ST3GAL2 3 7 chr16:70580049:+ chr16:70399533:- . NA TCGA-05-4402-01A-01R-1206-07 PTK2-UTP23 1 6 chr8:140925661:- chr8:116848888:+ . NA TCGA-05-4402-01A-01R-1206-07 VPS41-C7orf72 1 3 chr7:38869146:- chr7:50104314:+ FRAMESHIFT NA TCGA-05-4402-01A-01R-1206-07 NR2F6-OCEL1 1 2 chr19:17240671:- chr19:17228256:+ INFRAME NA TCGA-05-4403-01A-01R-1206-07 SYPL1-AKR1D1 1 1 chr7:106097690:- chr7:138097866:+ INFRAME NA TCGA-05-4405-01A-21R-1858-07 COL3A1-VMP1 1 3 chr2:189008142:+ chr17:59838295:+ FRAMESHIFT NA TCGA-05-4405-01A-21R-1858-07 MAPKAPK3-HEMK1 1 3 chr3:50617784:+ chr3:50571710:+ INFRAME NA TCGA-05-4415-01A-22R-1858-07 GRB10-MAD1L1 6 27 chr7:50755887:- chr7:2149238:- . NA TCGA-05-4415-01A-22R-1858-07 ERC1-VWF 5 27 chr12:1263165:+ chr12:5976260:- INFRAME NA TCGA-05-4415-01A-22R-1858-07 CCDC91-NTSR1 3 13 chr12:28391411:+ chr20:62754685:+ INFRAME NA TCGA-05-4415-01A-22R-1858-07 URGCP-ABCA13 2 6 chr7:43887415:- chr7:48192959:+ FRAMESHIFT NA TCGA-05-4417-01A-22R-1858-07 TMEM131-SPATA16 6 19 chr2:97927426:- chr3:173049094:- INFRAME NA TCGA-05-4418-01A-01R-1206-07 UCKL1-ZBTB46 2 4 chr20:63944397:- chr20:63747301:- INFRAME NA TCGA-05-4418-01A-01R-1206-07 MIDN-ABCA7 2 1 chr19:1251901:+ chr19:1061782:+ INFRAME NA TCGA-05-4418-01A-01R-1206-07 RIMKLB-A2ML1 1000 1000 chr12:8681818:+ chr12:8874425:+ . NA TCGA-05-4420-01A-01R-1206-07 TACC2-HS1BP3 13 158 chr10:122132734:+ chr2:20638652:- FRAMESHIFT NA TCGA-05-4420-01A-01R-1206-07 MUT-SUPT3H 16 40 chr6:49463168:- chr6:45020632:- . NA TCGA-05-4420-01A-01R-1206-07 TAF3-DNAJC1 6 28 chr10:7818875:+ chr10:21806099:- FRAMESHIFT NA TCGA-05-4420-01A-01R-1206-07 HAT1-EXOC6B 6 15 chr2:171979363:+ chr2:72184187:- INFRAME NA TCGA-05-4420-01A-01R-1206-07 PTK7-DLK2 2 10 chr6:43076567:+ chr6:43454474:- INFRAME NA TCGA-05-4420-01A-01R-1206-07 SNAP29-MAPK1 1 3 chr22:20870533:+ chr22:21807846:- INFRAME NA TCGA-05-4420-01A-01R-1206-07 PRSS12-TSPAN5 1 2 chr4:118352219:- chr4:98574905:- . NA TCGA-05-4422-01A-01R-1206-07 MAL2-ARFGEF1 123 230 chr8:119208604:+ chr8:67218138:- INFRAME NA TCGA-05-4422-01A-01R-1206-07 ZHX1-RALYL 36 132 chr8:123274217:- chr8:84774579:+ . NA TCGA-05-4422-01A-01R-1206-07 NDRG1-SNTB1 26 106 chr8:133280232:- chr8:120693908:- FRAMESHIFT NA TCGA-05-4422-01A-01R-1206-07 ATAD2-WDYHV1 1 49 chr8:123380529:- chr8:123427924:+ INFRAME NA TCGA-05-4422-01A-01R-1206-07 EFR3A-CASC21 4 32 chr8:131979422:+ chr8:127339281:+ . NA TCGA-05-4422-01A-01R-1206-07 EXT1-OC90 4 21 chr8:117818435:- chr8:132033164:- FRAMESHIFT NA TCGA-05-4422-01A-01R-1206-07 VASP-NDUFA3 1 13 chr19:45507776:+ chr19:54105934:+ INFRAME NA TCGA-05-4422-01A-01R-1206-07 KHDRBS3-EFR3A 2 8 chr8:135457954:+ chr8:131996406:+ INFRAME NA TCGA-05-4422-01A-01R-1206-07 ASAP1-RAD51B 1 8 chr8:130187236:- chr14:67823542:+ . NA TCGA-05-4422-01A-01R-1206-07 FBXO33-CNGB3 1000 1000 chr14:39432301:- chr8:86726657:- . NA TCGA-05-4424-01A-22R-1858-07 MYO10-ST6GALNAC3 1 11 chr5:16935788:- chr1:76313805:+ INFRAME NA TCGA-05-4426-01A-01R-1206-07 TICAM1-IL12RB1 21 132 chr19:4831614:- chr19:18069713:- . NA TCGA-05-4426-01A-01R-1206-07 MICAL3-SLC25A18 8 60 chr22:18001393:- chr22:17587136:+ . NA TCGA-05-4426-01A-01R-1206-07 NIPBL-MYO10 8 28 chr5:37010225:+ chr5:16877707:- INFRAME NA TCGA-05-4426-01A-01R-1206-07 CDC37-ELL 5 15 chr19:10403378:- chr19:18472882:- INFRAME NA TCGA-05-4426-01A-01R-1206-07 ANKH-MXD3 4 17 chr5:14741827:- chr5:177310540:- FRAMESHIFT NA TCGA-05-4426-01A-01R-1206-07 DNMT1-AP1M1 3 5 chr19:10143766:- chr19:16233493:+ FRAMESHIFT NA TCGA-05-4426-01A-01R-1206-07 AP1M1-CYP4F11 1 9 chr19:16209177:+ chr19:15929601:- INFRAME NA TCGA-05-4426-01A-01R-1206-07 ZMAT5-KIAA1671 1 3 chr22:29766949:- chr22:25014430:+ . NA TCGA-05-4426-01A-01R-1206-07 TLN1-SFTPB 1 1 chr9:35716390:- chr2:85659682:- . NA TCGA-05-4427-01A-21R-1858-07 PLS3-BICDL1 60 377 chrX:115640503:+ chr12:120061710:+ INFRAME NA TCGA-05-4427-01A-21R-1858-07 CDH1-CDKL3 11 55 chr16:68822225:+ chr5:134308466:- INFRAME Likely Oncogenic NA TCGA-05-4427-01A-21R-1858-07 GSE1-NOTCH3 8 50 chr16:85613398:+ chr19:15166091:- INFRAME NA TCGA-05-4427-01A-21R-1858-07 SWAP70-WEE1 5 62 chr11:9664278:+ chr11:9575888:+ INFRAME NA TCGA-05-4427-01A-21R-1858-07 PPP2CA-CDH3 2 33 chr5:134225760:- chr16:68676385:+ INFRAME NA TCGA-05-4427-01A-21R-1858-07 SPRED1-TMCO5A 4 20 chr15:38253217:+ chr15:37935257:+ . NA TCGA-05-4427-01A-21R-1858-07 ITGB6-CD302 1 19 chr2:160123791:- chr2:159783469:- INFRAME NA TCGA-05-4427-01A-21R-1858-07 SFMBT1-GNL3 2 15 chr3:53045816:- chr3:52686769:+ . NA TCGA-05-4427-01A-21R-1858-07 ASH1L-CCT3 3 8 chr1:155477886:- chr1:156312221:- FRAMESHIFT NA TCGA-05-4427-01A-21R-1858-07 ITCH-NBPF26 3 7 chr20:34408792:+ chr1:120763628:+ FRAMESHIFT NA TCGA-05-4427-01A-21R-1858-07 NFIC-CRB3 1 9 chr19:3452666:+ chr19:6466466:+ INFRAME NA TCGA-05-4427-01A-21R-1858-07 RGS3-BSPRY 2 5 chr9:113463881:+ chr9:113368259:+ FRAMESHIFT NA TCGA-05-4427-01A-21R-1858-07 C3orf33-PLCH1 1 4 chr3:155802532:- chr3:155596378:- INFRAME NA TCGA-05-4427-01A-21R-1858-07 KIF27-UBQLN1 1 4 chr9:83880297:- chr9:83686155:- INFRAME NA TCGA-05-4427-01A-21R-1858-07 CDC42BPA-C5 1 3 chr1:227317005:- chr9:121017852:- FRAMESHIFT NA TCGA-05-4430-01A-02R-1206-07 HSPG2-NTNG1 2 4 chr1:21895922:- chr1:107324282:+ FRAMESHIFT NA TCGA-05-4432-01A-01R-1206-07 TADA1-CADM3 50 208 chr1:166869445:- chr1:159199751:+ INFRAME NA TCGA-05-4432-01A-01R-1206-07 TTBK2-SPATA5L1 3 13 chr15:42920438:- chr15:45417269:+ . NA TCGA-05-4432-01A-01R-1206-07 AFF4-TH2LCRR 2 10 chr5:132927121:- chr5:132630891:- . NA TCGA-05-4432-01A-01R-1206-07 NARF-OLFML2B 2 4 chr17:82460072:+ chr1:162020182:- INFRAME NA TCGA-05-4432-01A-01R-1206-07 DPP3-FEZ1 2 3 chr11:66486677:+ chr11:125463570:- INFRAME NA TCGA-05-4434-01A-01R-1206-07 ETNK1-GLT1D1 4 23 chr12:22625586:+ chr12:128945326:+ INFRAME NA TCGA-05-4434-01A-01R-1206-07 PI4KA-ZNF274 3 5 chr22:20747583:- chr19:58206720:+ FRAMESHIFT NA TCGA-05-4434-01A-01R-1206-07 STYX-MDGA2 1 3 chr14:52730531:+ chr14:47301550:- FRAMESHIFT NA TCGA-05-5423-01A-01R-1628-07 NUS1-DCBLD1 1 3 chr6:117676085:+ chr6:117569620:+ INFRAME NA TCGA-05-5425-01A-02R-1628-07 LAMA3-GAREM1 43 237 chr18:23882045:+ chr18:32270383:- FRAMESHIFT NA TCGA-05-5425-01A-02R-1628-07 ACER3-PPME1 4 15 chr11:76959031:+ chr11:74222312:+ INFRAME NA TCGA-05-5425-01A-02R-1628-07 RBM39-BPIFA4P 1 17 chr20:35716740:- chr20:33201532:+ . NA TCGA-05-5425-01A-02R-1628-07 TESC-ECHDC3 2 8 chr12:117056806:- chr10:11747349:+ INFRAME NA TCGA-05-5425-01A-02R-1628-07 DHX8-PCTP 1 4 chr17:43508520:+ chr17:55822761:+ INFRAME NA TCGA-05-5429-01A-01R-1628-07 ERBB3-BCAR4 28 224 chr12:56100029:+ chr16:11820297:- . NA TCGA-05-5429-01A-01R-1628-07 PRKCA-PITPNC1 3 6 chr17:66496283:+ chr17:67532802:+ INFRAME NA TCGA-05-5429-01A-01R-1628-07 SEPT9-MPO 1 10 chr17:77307197:+ chr17:58273669:- FRAMESHIFT NA TCGA-05-5429-01A-01R-1628-07 SLC9A3R1-TTYH2 1 5 chr17:74749287:+ chr17:74260129:+ INFRAME NA TCGA-05-5715-01A-01R-1628-07 DROSHA-SPEF2 3 1 chr5:31483554:- chr5:35628460:+ INFRAME NA TCGA-35-3615-01A-01R-0946-07 TMCO4-KAZN 3 20 chr1:19747163:- chr1:14180435:+ INFRAME NA TCGA-35-4122-01A-01R-1107-07 ASAP1-SAMD12 8 9 chr8:130358017:- chr8:118197732:- FRAMESHIFT NA TCGA-35-4122-01A-01R-1107-07 IP6K1-UBA7 3 2 chr3:49747818:- chr3:49813942:- . NA TCGA-35-4123-01A-01R-1107-07 DST-HCST 18 125 chr6:56843055:- chr19:35903351:+ INFRAME NA TCGA-35-4123-01A-01R-1107-07 ARHGEF3-ANO10 13 67 chr3:56773709:- chr3:43432727:- INFRAME NA TCGA-35-4123-01A-01R-1107-07 PVT1-RNGTT 5 12 chr8:127794734:+ chr6:88801632:- . NA TCGA-35-4123-01A-01R-1107-07 RAI14-TTC23L 1 7 chr5:34686955:+ chr5:34862898:+ FRAMESHIFT NA TCGA-35-5375-01A-01R-1628-07 CXCL17-EXOSC5 3 6 chr19:42432976:- chr19:41391962:- INFRAME NA TCGA-35-5375-01A-01R-1628-07 LRBA-DRD3 2 5 chr4:150828180:- chr3:114128912:- FRAMESHIFT NA TCGA-35-5375-01A-01R-1628-07 MPRIP-SREBF1 2 2 chr17:17042971:+ chr17:17820521:- FRAMESHIFT NA TCGA-35-5375-01A-01R-1628-07 FDFT1-DEFB135 1 3 chr8:11821878:+ chr8:11984421:+ FRAMESHIFT NA TCGA-38-4628-01A-01R-1206-07 ZBED4-SUGCT 6 31 chr22:49853989:+ chr7:40237635:+ . NA TCGA-38-4628-01A-01R-1206-07 GRIP1-RPSAP52 6 18 chr12:66596847:- chr12:65759031:- . NA TCGA-38-4628-01A-01R-1206-07 GEMIN4-CRTC3 2 1 chr17:752618:- chr15:90617883:+ . NA TCGA-38-4631-01A-01R-1755-07 PUM1-NKAIN1 9 79 chr1:31059204:- chr1:31188187:- INFRAME NA TCGA-38-4631-01A-01R-1755-07 TFEB-CAPZA2 5 15 chr6:41735350:- chr7:116888127:+ . NA TCGA-38-4631-01A-01R-1755-07 COG5-CBLL1 1 10 chr7:107412502:- chr7:107758143:+ INFRAME NA TCGA-38-4631-01A-01R-1755-07 CLOCK-PHF21A 1 8 chr4:55453054:- chr11:45979966:- INFRAME NA TCGA-38-4631-01A-01R-1755-07 HCG20-IMMP2L 1 3 chr6:30782126:+ chr7:110963565:- . NA TCGA-38-4632-01A-01R-1755-07 RNF121-VWA5A 11 41 chr11:71929124:+ chr11:124117497:+ INFRAME NA TCGA-38-4632-01A-01R-1755-07 CBL-VWA5A 6 46 chr11:119206612:+ chr11:124117497:+ INFRAME Likely Oncogenic NA TCGA-38-4632-01A-01R-1755-07 SYTL2-DOK5 6 37 chr11:85810954:- chr20:54610388:+ . NA TCGA-38-4632-01A-01R-1755-07 CADM1-ARCN1 5 19 chr11:115504271:- chr11:118597707:+ FRAMESHIFT NA TCGA-38-4632-01A-01R-1755-07 CHST8-KCNJ15 2 9 chr19:33689391:+ chr21:38296926:+ . NA TCGA-38-4632-01A-01R-1755-07 SORL1-SYTL2 3 5 chr11:121595772:+ chr11:85717530:- INFRAME NA TCGA-38-4632-01A-01R-1755-07 CDKL2-G3BP2 1 8 chr4:75625821:- chr4:75648741:- INFRAME NA TCGA-38-4632-01A-01R-1755-07 DTD1-POU2F3 2 2 chr20:18628233:+ chr11:120315361:+ INFRAME NA TCGA-38-4632-01A-01R-1755-07 MINK1-USO1 1 6 chr17:4859328:+ chr4:75799622:+ FRAMESHIFT NA TCGA-38-4632-01A-01R-1755-07 DLGAP1-ENOSF1 1 3 chr18:3534194:- chr18:675402:- FRAMESHIFT NA TCGA-38-6178-01A-11R-1755-07 APMAP-ZNF337 2 20 chr20:24983903:- chr20:25686466:- . NA TCGA-38-6178-01A-11R-1755-07 PTPRJ-FCER1G 2 12 chr11:48112983:+ chr1:161217986:+ INFRAME NA TCGA-38-6178-01A-11R-1755-07 PTDSS1-PTK2 2 3 chr8:96309622:+ chr8:140830526:- INFRAME NA TCGA-44-2656-01A-02R-0946-07 ZFAND3-LYRM4 42 259 chr6:37929999:+ chr6:5109491:- INFRAME NA TCGA-44-2656-01A-02R-0946-07 EEF1A2-ZBTB46 2 20 chr20:63493137:- chr20:63775962:- INFRAME NA TCGA-44-2656-01A-02R-0946-07 MAP3K13-LIPH 1000 1000 chr3:185465805:+ chr3:185552613:- . NA TCGA-44-2657-01A-01R-1107-07 BRD4-PGLYRP1 23 3 chr19:15332290:- chr19:46019647:- . Oncogenic NA TCGA-44-2657-01A-01R-1107-07 ZNF302-CACNA1A 4 17 chr19:34678813:+ chr19:13255259:- INFRAME NA TCGA-44-2657-01A-01R-1107-07 MARS-CTDSP2 1 10 chr12:57504299:+ chr12:57829596:- FRAMESHIFT NA TCGA-44-2657-01A-01R-1107-07 SLC16A7-OS9 2 5 chr12:59596236:+ chr12:57715760:+ . NA TCGA-44-2659-01A-01R-0946-07 GTPBP1-TOMM22 11 23 chr22:38728161:+ chr22:38682879:+ FRAMESHIFT NA TCGA-44-2659-01A-01R-0946-07 GALNT11-EZH2 5 39 chr7:152025884:+ chr7:148832750:- . NA TCGA-44-2659-01A-01R-0946-07 TAOK1-ZNF385C 2 5 chr17:29451680:+ chr17:42034335:- INFRAME NA TCGA-44-2662-01A-01R-0946-07 ACTN4-RPS16 13 322 chr19:38647907:+ chr19:39435708:- INFRAME NA TCGA-44-2662-01A-01R-0946-07 ADAMTS16-TERT 5 10 chr5:5191790:+ chr5:1282624:- FRAMESHIFT NA TCGA-44-2662-01A-01R-0946-07 NOMO3-INO80E 1 9 chr16:16256158:+ chr16:30000758:+ FRAMESHIFT NA TCGA-44-2665-01A-01R-0946-07 SSB-CASP8 1 1 chr2:169798976:+ chr2:201266461:+ . Likely Oncogenic NA TCGA-44-2666-01A-01R-0946-07 TSPAN14-VDAC2 2 1 chr10:80489314:+ chr10:75229644:+ INFRAME NA TCGA-44-2668-01A-01R-0946-07 TEN1-TMEM94 5 13 chr17:75979511:+ chr17:75471800:+ . NA TCGA-44-2668-01A-01R-0946-07 SLC16A1-SENP6 3 8 chr1:112929092:- chr6:75621532:+ INFRAME NA TCGA-44-2668-01A-01R-0946-07 MIDN-ARID3A 1 8 chr19:1250529:+ chr19:971878:+ FRAMESHIFT NA TCGA-44-2668-01A-01R-0946-07 RSBN1L-PTPN12 2 3 chr7:77768803:+ chr7:77585543:+ FRAMESHIFT NA TCGA-44-2668-01A-01R-0946-07 AARS-COG4 1 4 chr16:70254621:- chr16:70519731:- INFRAME NA TCGA-44-2668-01A-01R-0946-07 TNRC18-RSPH10B 1 3 chr7:5421060:- chr7:5928394:- INFRAME NA TCGA-44-3396-01A-01R-1206-07 ITGA3-MIEN1 52 152 chr17:50056645:+ chr17:39730291:- INFRAME NA TCGA-44-3396-01A-01R-1206-07 NME2-ACBD4 6 29 chr17:51166956:+ chr17:45139021:+ INFRAME NA TCGA-44-3396-01A-01R-1206-07 RECQL5-CCDC47 1 7 chr17:75628218:- chr17:63766194:- . NA TCGA-44-3396-01A-01R-1206-07 C10orf11-VCL 1 5 chr10:75438494:+ chr10:74043083:+ FRAMESHIFT NA TCGA-44-3398-01A-01R-1107-07 NAPSA-UQCRC2 1 2 chr19:50365539:- chr16:21962460:+ INFRAME NA TCGA-44-3918-01A-01R-1107-07 RAB12-PPP4R1 5 14 chr18:8609953:+ chr18:9577191:- FRAMESHIFT NA TCGA-44-3918-01A-01R-1107-07 STRN3-PRKD1 4 6 chr14:31025904:- chr14:29725674:- INFRAME NA TCGA-44-3918-01A-01R-1107-07 RAD9A-RBM14 3 7 chr11:67330982:+ chr11:66619425:+ . NA TCGA-44-3918-01A-01R-1107-07 GSK3B-TMEM31 4 2 chr3:119876413:- chrX:103712236:+ . NA TCGA-44-3918-01A-01R-1107-07 RAPGEF5-TMEM8C 1 5 chr7:22356830:- chr9:133520288:- INFRAME NA TCGA-44-3918-01A-01R-1107-07 PER3-GNAL 1 4 chr1:7798673:+ chr18:11862395:+ FRAMESHIFT NA TCGA-44-3919-01A-02R-1107-07 KIF16B-RRBP1 4 5 chr20:16526092:- chr20:17660528:- . NA TCGA-44-4112-01A-01R-1107-07 GAPDH-NCAPD2 2 174 chr12:6534861:+ chr12:6528173:+ INFRAME NA TCGA-44-4112-01A-01R-1107-07 CIITA-VWA3A 15 31 chr16:10879042:+ chr16:22140154:+ . NA TCGA-44-4112-01A-01R-1107-07 LONP2-C22orf39 3 19 chr16:48303305:+ chr22:19410778:- FRAMESHIFT NA TCGA-44-4112-01A-01R-1107-07 LONP2-HIRA 3 19 chr16:48303305:+ chr22:19410778:- INFRAME NA TCGA-44-4112-01A-01R-1107-07 CDC42SE2-LYRM7 4 2 chr5:131264166:+ chr5:131180095:+ . NA TCGA-44-4112-01A-01R-1107-07 TMEM267-PAIP1 3 4 chr5:43483822:- chr5:43555999:- . NA TCGA-44-4112-01A-01R-1107-07 TMPRSS3-RSPH1 2 3 chr21:42375716:- chr21:42493079:- INFRAME NA TCGA-44-4112-01A-01R-1107-07 CDC23-CDC25C 1 3 chr5:138201107:- chr5:138292116:- INFRAME NA TCGA-44-4112-01A-01R-1107-07 SCYL1-FRMD8 1 3 chr11:65532805:+ chr11:65404864:+ INFRAME NA TCGA-44-5643-01A-01R-1628-07 PPA2-TBCK 3 18 chr4:105473894:- chr4:106095641:- INFRAME NA TCGA-44-5644-01A-21R-2039-07 RPRD1B-CTNNBL1 7 47 chr20:38066256:+ chr20:37765197:+ INFRAME NA TCGA-44-5644-01A-21R-2039-07 TTC28-ODF1 11 21 chr22:28629552:- chr8:102560452:+ FRAMESHIFT NA TCGA-44-5644-01A-21R-2039-07 TSEN15-ACBD6 3 24 chr1:184051890:+ chr1:180492365:- FRAMESHIFT NA TCGA-44-5644-01A-21R-2039-07 SNHG7-MCM6 4 16 chr9:136725055:- chr2:135872843:- . NA TCGA-44-5644-01A-21R-2039-07 ERC1-ZNF492 2 7 chr12:1290012:+ chr19:22663800:+ FRAMESHIFT NA TCGA-44-5645-01A-01R-1628-07 RAPGEF5-CFDP1 3 10 chr7:22193367:- chr16:75305182:- FRAMESHIFT NA TCGA-44-5645-01A-01R-1628-07 VAC14-HYDIN 4 4 chr16:70800797:- chr16:70879756:- FRAMESHIFT NA TCGA-44-6145-01A-11R-1755-07 EFTUD2-IGHJ4 9 0 chr17:44853693:- chr14:105864256:- . NA TCGA-44-6145-01A-11R-1755-07 PRPSAP2-EEPD1 1 11 chr17:18872649:+ chr7:36281115:+ INFRAME NA TCGA-44-6145-01A-11R-1755-07 ANKRD30BP2-ACACA 1 4 chr21:13060883:+ chr17:37097984:- . NA TCGA-44-6146-01A-11R-1755-07 MUC5AC-CAPN2 1 7 chr11:1193659:+ chr1:223766367:+ INFRAME NA TCGA-44-6146-01A-11R-1755-07 FKTN-TMEM38B 1 4 chr9:105604492:+ chr9:105773865:+ FRAMESHIFT NA TCGA-44-6774-01A-21R-1858-07 SPECC1L-BCL2L13 1 8 chr22:24270983:+ chr22:17696141:+ . NA TCGA-44-6774-01A-21R-1858-07 SPARC-CTSD 1 5 chr5:151671573:- chr11:1753880:- INFRAME NA TCGA-44-6774-01A-21R-1858-07 PVT1-BASP1 1 3 chr8:128010444:+ chr5:17275208:+ . NA TCGA-44-6775-01A-11R-1858-07 STK3-CPQ 1 11 chr8:98596032:- chr8:96784864:+ . NA TCGA-44-6776-01A-11R-1858-07 EIF3G-SFTPB 1 5 chr19:10118668:- chr2:85659682:- . NA TCGA-44-6778-01A-11R-1858-07 LRRC45-GNB1 10 29 chr17:82029185:+ chr1:1817875:- INFRAME NA TCGA-44-6778-01A-11R-1858-07 EHD1-BATF2 4 23 chr11:64874421:- chr11:64989812:- FRAMESHIFT NA TCGA-44-6778-01A-11R-1858-07 ULK4-ANO10 2 11 chr3:41883874:- chr3:43366974:- INFRAME NA TCGA-44-6778-01A-11R-1858-07 UBXN4-R3HDM1 2 5 chr2:135780385:+ chr2:135602500:+ . NA TCGA-44-7659-01A-11R-2066-07 TNRC6B-FAM19A5 2 7 chr22:40156182:+ chr22:48749839:+ FRAMESHIFT NA TCGA-44-7659-01A-11R-2066-07 TNRC6B-ZC3H7B 2 3 chr22:40044998:+ chr22:41355469:+ . NA TCGA-44-7660-01A-11R-2066-07 MORF4L2-GLRA4 58 289 chrX:103678499:- chrX:103719271:- . NA TCGA-44-7660-01A-11R-2066-07 MYO1E-BNIP2 34 186 chr15:59372498:- chr15:59671314:- FRAMESHIFT NA TCGA-44-7660-01A-11R-2066-07 RAB14-STOM 9 12 chr9:121201639:- chr9:121349323:- . NA TCGA-44-7660-01A-11R-2066-07 ARRB1-KLHL35 2 20 chr11:75351588:- chr11:75426638:- FRAMESHIFT NA TCGA-44-7660-01A-11R-2066-07 ATF6-PCP4L1 4 9 chr1:161802272:+ chr1:161283668:+ INFRAME NA TCGA-44-7660-01A-11R-2066-07 ACVR1-CCDC148 4 7 chr2:157818385:- chr2:158178996:- . NA TCGA-44-7660-01A-11R-2066-07 TMC6-DNAH17 5 3 chr17:78123989:- chr17:78500461:- INFRAME NA TCGA-44-7660-01A-11R-2066-07 G3BP2-NAAA 2 11 chr4:75673208:- chr4:75919975:- . NA TCGA-44-7660-01A-11R-2066-07 TBC1D22A-RIBC2 2 9 chr22:46894846:+ chr22:45430900:+ INFRAME NA TCGA-44-7660-01A-11R-2066-07 MYO1E-GTF2A2 1 12 chr15:59372498:- chr15:59642262:- INFRAME NA TCGA-44-7660-01A-11R-2066-07 EIF2B3-ZBTB5 1 11 chr1:44978315:- chr9:37442555:- . NA TCGA-44-7660-01A-11R-2066-07 SZT2-EIF2B3 2 7 chr1:43432439:+ chr1:44981177:- . NA TCGA-44-7660-01A-11R-2066-07 CTSC-GRM5 1 7 chr11:88334937:- chr11:88509504:- FRAMESHIFT NA TCGA-44-7660-01A-11R-2066-07 FAM168A-C2CD3 1 4 chr11:73468405:- chr11:74085886:- FRAMESHIFT NA TCGA-44-7661-01A-11R-2066-07 SAMHD1-SCAND1 4 11 chr20:36951615:- chr20:35955096:- . NA TCGA-44-7661-01A-11R-2066-07 RBL1-FER1L4 2 7 chr20:37088989:- chr20:35584093:- . NA TCGA-44-7662-01A-11R-2066-07 MET-WNT2 128 460 chr7:116777469:+ chr7:117297876:- INFRAME NA TCGA-44-7667-01A-31R-2066-07 SF3B3-CDH15 68 190 chr16:70544533:+ chr16:89179416:+ INFRAME NA TCGA-44-7667-01A-31R-2066-07 SLC14A2-ABHD3 32 124 chr18:45213191:+ chr18:21664230:- . NA TCGA-44-7667-01A-31R-2066-07 GTF2F2-CTIF 10 49 chr13:45207505:+ chr18:48757919:+ INFRAME NA TCGA-44-7667-01A-31R-2066-07 TGIF1-DDX19B 9 53 chr18:3447797:+ chr16:70314902:+ INFRAME NA TCGA-44-7667-01A-31R-2066-07 CTIF-SDHAF4 3 17 chr18:48761689:+ chr6:70588615:+ FRAMESHIFT NA TCGA-44-7667-01A-31R-2066-07 RAI14-CLPTM1L 1 7 chr5:34656475:+ chr5:1341860:- . NA TCGA-44-7667-01A-31R-2066-07 SLC7A5-WWP2 1 3 chr16:87868885:- chr16:69786996:+ . NA TCGA-44-7667-01A-31R-2066-07 SF3B3-CDH3 1000 1000 chr16:70544533:+ chr16:89179416:+ . NA TCGA-44-7669-01A-21R-2066-07 FOXN3-SLC25A21 5 65 chr14:89190384:- chr14:36875004:- INFRAME NA TCGA-44-7669-01A-21R-2066-07 CDH2-LAMA3 5 60 chr18:28147673:- chr18:23813057:+ INFRAME NA TCGA-44-7669-01A-21R-2066-07 SARNP-PTMS 6 41 chr12:55789075:- chr12:6769603:+ INFRAME NA TCGA-44-7669-01A-21R-2066-07 ERC1-APOLD1 1 12 chr12:991322:+ chr12:12812261:+ . NA TCGA-44-7669-01A-21R-2066-07 APLP2-SPCS2 2 2 chr11:130127840:+ chr11:74965034:+ INFRAME NA TCGA-44-7669-01A-21R-2066-07 SART3-CORO1C 2 1 chr12:108535359:- chr12:108649020:- INFRAME NA TCGA-44-7670-01A-11R-2066-07 ASXL2-SRBD1 26 93 chr2:25878166:- chr2:45488331:- FRAMESHIFT Likely Oncogenic NA TCGA-44-7670-01A-11R-2066-07 CPNE8-CADM2 16 74 chr12:38905437:- chr3:85802047:+ FRAMESHIFT NA TCGA-44-7670-01A-11R-2066-07 SCMH1-CUL3 9 64 chr1:41242059:- chr2:224478345:- . NA TCGA-44-7670-01A-11R-2066-07 FRMD6-SCFD1 9 50 chr14:51651996:+ chr14:30694773:+ . NA TCGA-44-7670-01A-11R-2066-07 CDK6-STXBP6 6 29 chr7:92833091:- chr14:24812732:- FRAMESHIFT NA TCGA-44-7670-01A-11R-2066-07 FAM53B-KCNN1 4 35 chr10:124681607:- chr19:17988415:+ INFRAME NA TCGA-44-7670-01A-11R-2066-07 FAM133B-CDK6 1 23 chr7:92590268:- chr7:92833690:- . NA TCGA-44-7670-01A-11R-2066-07 PHACTR1-BCL11A 1 22 chr6:12749790:+ chr2:60452666:- INFRAME NA TCGA-44-7670-01A-11R-2066-07 ZNF638-PHACTR1 4 10 chr2:71276754:+ chr6:13160204:+ FRAMESHIFT NA TCGA-44-7670-01A-11R-2066-07 CDKN2A-FOCAD 1 17 chr9:21994139:- chr9:20881871:+ INFRAME Likely Oncogenic NA TCGA-44-7670-01A-11R-2066-07 SYMPK-MAP3K13 1 6 chr19:45822756:- chr3:185437447:+ INFRAME NA TCGA-44-7670-01A-11R-2066-07 BICD1-CDK6 1 4 chr12:32107544:+ chr7:92618207:- FRAMESHIFT NA TCGA-44-7670-01A-11R-2066-07 SPAG16-CACHD1 1 4 chr2:213297357:+ chr1:64550594:+ INFRAME NA TCGA-44-7670-01A-11R-2066-07 FNTA-KMT2C 1 2 chr8:43083180:+ chr7:152273867:- FRAMESHIFT Likely Oncogenic NA TCGA-44-7671-01A-11R-2066-07 SPINT2-CYP2B7P 2 7 chr19:38264998:+ chr19:40944331:+ . NA TCGA-44-7672-01A-11R-2066-07 ABCC6-LTA4H 2 7 chr16:16182412:- chr12:96003920:- INFRAME NA TCGA-44-8117-01A-11R-2241-07 CCDC6-LIPI 8 127 chr10:59852553:- chr21:14109080:- FRAMESHIFT NA TCGA-44-8117-01A-11R-2241-07 UQCRC1-SMARCC1 8 44 chr3:48609162:- chr3:47590837:- FRAMESHIFT NA TCGA-44-8117-01A-11R-2241-07 JARID2-HSD3B1 3 11 chr6:15246584:+ chr1:119507392:+ . NA TCGA-44-8117-01A-11R-2241-07 C22orf39-ADAM2 2 13 chr22:19405786:- chr8:39769575:- . NA TCGA-44-8117-01A-11R-2241-07 HIRA-ADAM2 2 13 chr22:19405786:- chr8:39769575:- FRAMESHIFT NA TCGA-44-8117-01A-11R-2241-07 EFCAB2-FKBP3 3 2 chr1:245059458:+ chr14:45130800:- INFRAME NA TCGA-44-8119-01A-11R-2241-07 CEP170-RGS7 5 12 chr1:243221724:- chr1:240827172:- INFRAME NA TCGA-44-8119-01A-11R-2241-07 SHC2-CREB3L3 1 5 chr19:460529:- chr19:4164503:+ INFRAME NA TCGA-44-A479-01A-31R-A24H-07 ATXN7L1-AGBL3 16 18 chr7:105875812:- chr7:135134841:+ FRAMESHIFT NA TCGA-44-A479-01A-31R-A24H-07 SNX6-MIPOL1 3 10 chr14:34575756:- chr14:37422855:+ INFRAME NA TCGA-44-A479-01A-31R-A24H-07 EVA1C-MROH8 4 5 chr21:32413013:+ chr20:37115337:- FRAMESHIFT NA TCGA-44-A479-01A-31R-A24H-07 KIAA1324L-ABCA13 2 4 chr7:86918442:- chr7:48268980:+ FRAMESHIFT NA TCGA-44-A479-01A-31R-A24H-07 TRIM24-KIAA1324L 2 3 chr7:138460912:+ chr7:86947922:- INFRAME NA TCGA-44-A47B-01A-11R-A24H-07 DLGAP4-BPI 33 157 chr20:36500611:+ chr20:38288716:+ FRAMESHIFT NA TCGA-44-A47B-01A-11R-A24H-07 KDM5A-RAE1 28 65 chr12:350621:- chr20:57365356:+ INFRAME NA TCGA-44-A47B-01A-11R-A24H-07 WSB1-FN3KRP 13 43 chr17:27294435:+ chr17:82718906:+ FRAMESHIFT NA TCGA-44-A47B-01A-11R-A24H-07 TM9SF4-EYA2 4 21 chr20:32160111:+ chr20:46990001:+ . NA TCGA-44-A47B-01A-11R-A24H-07 SPOP-PECAM1 5 10 chr17:49677933:- chr17:64390763:- . Likely Oncogenic NA TCGA-44-A47B-01A-11R-A24H-07 HEBP1-ZBTB46 4 8 chr12:12987152:- chr20:63747301:- FRAMESHIFT NA TCGA-44-A47B-01A-11R-A24H-07 CYTH1-KSR1 1 7 chr17:78736692:- chr17:27550568:+ FRAMESHIFT NA TCGA-44-A47G-01A-21R-A24H-07 ROCK1-GATA6 3 8 chr18:21110818:- chr18:22200656:+ INFRAME NA TCGA-44-A47G-01A-21R-A24H-07 YY1-CCNK 3 8 chr14:100239923:+ chr14:99502207:+ INFRAME NA TCGA-44-A4SS-01A-11R-A24X-07 MLLT6-LASP1 26 130 chr17:38705741:+ chr17:38890420:+ FRAMESHIFT NA TCGA-44-A4SS-01A-11R-A24X-07 ITGAV-PDE11A 2 17 chr2:186590523:+ chr2:177905187:- FRAMESHIFT NA TCGA-44-A4SS-01A-11R-A24X-07 ST14-ERBB2 1 2 chr11:130189896:+ chr17:39717320:+ FRAMESHIFT NA TCGA-44-A4SU-01A-11R-A24X-07 FXYD5-FXYD3 4 5 chr19:35157501:+ chr19:35116264:+ . NA TCGA-44-A4SU-01A-11R-A24X-07 ARAP1-FADD 2 12 chr11:72701649:- chr11:70206133:+ INFRAME NA TCGA-49-4486-01A-01R-1206-07 KDM4B-AKAP8L 29 124 chr19:5144902:+ chr19:15380612:- INFRAME NA TCGA-49-4486-01A-01R-1206-07 CIC-COQ8B 23 109 chr19:42272452:+ chr19:40693037:- INFRAME Likely Oncogenic NA TCGA-49-4486-01A-01R-1206-07 COQ8B-AKAP8 19 77 chr19:40695989:- chr19:15359062:- INFRAME NA TCGA-49-4487-01A-21R-1858-07 ATOH8-VAMP5 5 23 chr2:85764182:+ chr2:85591725:+ INFRAME NA TCGA-49-4487-01A-21R-1858-07 BAG2-RNF114 2 19 chr6:57172810:+ chr20:49949248:+ FRAMESHIFT NA TCGA-49-4487-01A-21R-1858-07 CARMIL1-SLC17A1 2 3 chr6:25284909:+ chr6:25819915:- INFRAME NA TCGA-49-4487-01A-21R-1858-07 WASH3P-PPP1R13L 1 7 chr15:101966223:+ chr19:45380228:- . NA TCGA-49-4487-01A-21R-1858-07 SPATA2-GSTA5 2 2 chr20:49915380:- chr6:52832990:- . NA TCGA-49-4488-01A-01R-1755-07 COX6B1-TTYH1 3 27 chr19:35651349:+ chr19:54426673:+ INFRAME NA TCGA-49-4488-01A-01R-1755-07 KMT2B-CEACAM16 5 10 chr19:35737263:+ chr19:44710496:+ FRAMESHIFT Inconclusive NA TCGA-49-4488-01A-01R-1755-07 BMP5-COL21A1 1 6 chr6:55874376:- chr6:56101525:- FRAMESHIFT NA TCGA-49-4488-01A-01R-1755-07 LARP4B-IDI2 1000 1000 chr10:836405:- chr10:1025859:- . NA TCGA-49-4490-01A-21R-1858-07 ELL-MVB12A 1 7 chr19:18521921:- chr19:17406077:+ . NA TCGA-49-4490-01A-21R-1858-07 MAGI1-PARD6G 2 1 chr3:65621972:- chr18:80202932:- FRAMESHIFT NA TCGA-49-4490-01A-21R-1858-07 RGS22-NIPAL2 1 3 chr8:100047463:- chr8:98254087:- FRAMESHIFT NA TCGA-49-4494-01A-01R-1206-07 MCU-CNNM2 4 8 chr10:72715902:+ chr10:102927345:+ . NA TCGA-49-4494-01A-01R-1206-07 SHANK2-BANF1 3 9 chr11:71224697:- chr11:66003626:+ . NA TCGA-49-4501-01A-01R-1206-07 CNTN1-TSPAN8 9 249 chr12:40692592:+ chr12:71282819:- . NA TCGA-49-4501-01A-01R-1206-07 CHD6-CNBD2 5 7 chr20:41618340:- chr20:35972629:+ . NA TCGA-49-4501-01A-01R-1206-07 SLC2A13-RAB3IP 2 16 chr12:39830103:- chr12:69815364:+ FRAMESHIFT NA TCGA-49-4501-01A-01R-1206-07 ECE1-PCP4 1 11 chr1:21244989:- chr21:39898476:+ INFRAME NA TCGA-49-4501-01A-01R-1206-07 LRRK2-CCT2 2 4 chr12:40287539:+ chr12:69592059:+ INFRAME NA TCGA-49-4501-01A-01R-1206-07 RHBDL2-PABPC4 1 7 chr1:38941682:- chr1:39564542:- . NA TCGA-49-4501-01A-01R-1206-07 DTL-AGBL4 1 3 chr1:212047417:+ chr1:49851518:- INFRAME NA TCGA-49-4501-01A-01R-1206-07 TMC5-SYT17 1 3 chr16:19430640:+ chr16:19223045:+ . NA TCGA-49-4505-01A-01R-1206-07 WFDC3-NEURL2 135 407 chr20:45758392:- chr20:45888873:- . NA TCGA-49-4505-01A-01R-1206-07 RNF130-RASGEF1C 5 10 chr5:180071456:- chr5:180111580:- FRAMESHIFT NA TCGA-49-4506-01A-01R-1206-07 RBBP5-DSTYK 1 15 chr1:205114789:- chr1:205150794:- FRAMESHIFT NA TCGA-49-4507-01A-01R-1206-07 THRAP3-CAPZB 89 314 chr1:36224505:+ chr1:19378653:- . NA TCGA-49-4512-01A-21R-1858-07 CHID1-RRBP1 4 2 chr11:910775:- chr20:17629961:- . NA TCGA-49-4512-01A-21R-1858-07 RRBP1-CHID1 1 11 chr20:17633460:- chr11:893519:- INFRAME NA TCGA-49-4512-01A-21R-1858-07 RALY-CDK5RAP1 2 1 chr20:34031604:+ chr20:33359123:- . NA TCGA-49-4514-01A-21R-1858-07 CAPN13-GALNT14 4 10 chr2:30787128:- chr2:30932194:- FRAMESHIFT NA TCGA-49-4514-01A-21R-1858-07 RIT1-CCT3 4 10 chr1:155910450:- chr1:156312221:- FRAMESHIFT NA TCGA-49-4514-01A-21R-1858-07 IFT122-HMCES 1 3 chr3:129488397:+ chr3:129298354:+ INFRAME NA TCGA-49-4514-01A-21R-1858-07 YARS-ST3GAL3 1 3 chr1:32806482:- chr1:43814891:+ FRAMESHIFT NA TCGA-49-6743-01A-11R-1858-07 DCHS2-FGG 45 359 chr4:154489304:- chr4:154612201:- INFRAME NA TCGA-49-6743-01A-11R-1858-07 CCDC97-GTF2A2 30 226 chr19:41310356:+ chr15:59652326:- . NA TCGA-49-6743-01A-11R-1858-07 REL-MVP 47 134 chr2:60917017:+ chr16:29835704:+ INFRAME NA TCGA-49-6743-01A-11R-1858-07 ATXN7L1-EFCAB10 2 10 chr7:105788604:- chr7:105569571:- INFRAME NA TCGA-49-6743-01A-11R-1858-07 BCAS1-CYP24A1 1 6 chr20:54058085:- chr20:54171670:- FRAMESHIFT NA TCGA-49-6743-01A-11R-1858-07 TARBP1-TOMM20 1 1 chr1:234460261:- chr1:235113910:- FRAMESHIFT NA TCGA-49-6744-01A-11R-1858-07 PARD3B-WWOX 8 8 chr2:205125737:+ chr16:79211608:+ INFRAME NA TCGA-49-6745-01A-11R-1858-07 BAZ2A-BIN2 25 74 chr12:56630125:- chr12:51292344:- . NA TCGA-49-AAQV-01A-11R-A39D-07 USF2-CLASRP 15 48 chr19:35271141:+ chr19:45053098:+ INFRAME NA TCGA-49-AAQV-01A-11R-A39D-07 NAP1L1-SLCO1B1 2 22 chr12:76084567:- chr12:21141514:+ . NA TCGA-49-AAQV-01A-11R-A39D-07 UNC45A-BLM 1 2 chr15:90940473:+ chr15:90815102:+ FRAMESHIFT NA TCGA-49-AAR0-01A-21R-A39D-07 SMURF1-SLC26A5 8 33 chr7:99121146:- chr7:103352926:- . NA TCGA-49-AAR0-01A-21R-A39D-07 GTF2IRD1-ZAN 8 7 chr7:74538760:+ chr7:100791966:+ FRAMESHIFT NA TCGA-49-AAR0-01A-21R-A39D-07 SMURF1-DNAJC2 4 21 chr7:99143726:- chr7:103341954:- INFRAME NA TCGA-49-AAR0-01A-21R-A39D-07 UBE3C-GBX1 1 7 chr7:157207935:+ chr7:151150021:- . NA TCGA-49-AAR0-01A-21R-A39D-07 PRPF18-CCDC3 1 3 chr10:13587152:+ chr10:12898679:- INFRAME NA TCGA-49-AAR3-01A-11R-A41B-07 EYA3-GUCA1C 10 49 chr1:28088524:- chr3:108920585:- . NA TCGA-49-AAR4-01A-12R-A41B-07 THOC1-TYMSOS 2 4 chr18:260186:- chr18:649964:- . NA TCGA-49-AAR9-01A-21R-A41B-07 SLC38A10-TESPA1 2 7 chr17:81294823:- chr12:54966151:- FRAMESHIFT NA TCGA-49-AAR9-01A-21R-A41B-07 EZH2-TMEM176B 1 3 chr7:148884164:- chr7:150796574:- . NA TCGA-49-AARE-01A-11R-A41B-07 SREBF2-MEI1 13 46 chr22:41868792:+ chr22:41770686:+ INFRAME NA TCGA-49-AARE-01A-11R-A41B-07 PRCC-RHBG 13 18 chr1:156768239:+ chr1:156382748:+ FRAMESHIFT NA TCGA-49-AARE-01A-11R-A41B-07 NCOA3-DNM2 1 12 chr20:47628023:+ chr19:10829036:+ FRAMESHIFT NA TCGA-49-AARE-01A-11R-A41B-07 BCL2L1-VWA5B1 1 7 chr20:31721655:- chr1:20310576:+ . NA TCGA-49-AARE-01A-11R-A41B-07 NINL-MIR663AHG 1 5 chr20:25585455:- chr20:26192232:- . NA TCGA-49-AARE-01A-11R-A41B-07 KEAP1-EYA2 1 4 chr19:10489192:- chr20:47169139:+ FRAMESHIFT Likely Oncogenic NA TCGA-49-AARE-01A-11R-A41B-07 MRPL33-ZNF512 1 3 chr2:27771799:+ chr2:27607845:+ FRAMESHIFT NA TCGA-49-AARO-01A-12R-A41B-07 R3HDM2-OS9 2 16 chr12:57255990:- chr12:57715760:+ FRAMESHIFT NA TCGA-49-AARQ-01A-11R-A41B-07 MRPL49-ARL2 15 49 chr11:65122424:+ chr11:65020419:+ INFRAME NA TCGA-49-AARQ-01A-11R-A41B-07 NECTIN4-PFDN2 8 31 chr1:161089218:- chr1:161102375:- FRAMESHIFT NA TCGA-49-AARQ-01A-11R-A41B-07 UNKL-KIAA0430 5 10 chr16:1366018:- chr16:15595229:- . NA TCGA-4B-A93V-01A-11R-A39D-07 RAPGEF1-TTF1 20 52 chr9:131638635:- chr9:132376168:- FRAMESHIFT NA TCGA-4B-A93V-01A-11R-A39D-07 IDI1-AKR1C3 8 13 chr10:1048864:- chr10:5077900:+ . NA TCGA-4B-A93V-01A-11R-A39D-07 DIP2C-TUBB8 3 5 chr10:689494:- chr10:48912:- FRAMESHIFT NA TCGA-4B-A93V-01A-11R-A39D-07 PNPLA7-SNAPC4 1 9 chr9:137484587:- chr9:136388591:- FRAMESHIFT NA TCGA-50-5044-01A-21R-1858-07 SETD2-POGLUT1 3 8 chr3:47097955:- chr3:119488929:+ INFRAME Likely Oncogenic NA TCGA-50-5049-01A-01R-1628-07 EMP2-BCAR4 3 19 chr16:10580549:- chr16:11820297:- . NA TCGA-50-5049-01A-01R-1628-07 CCDC28A-CLEC16A 2 12 chr6:138779985:+ chr16:11166388:+ INFRAME NA TCGA-50-5049-01A-01R-1628-07 DAB2IP-LAMC3 2 2 chr9:121766730:+ chr9:131068078:+ FRAMESHIFT NA TCGA-50-5051-01A-21R-1858-07 SENP1-C12orf80 6 17 chr12:48096343:- chr12:52212602:- . NA TCGA-50-5055-01A-01R-1628-07 TYW1-TSFM 2 13 chr7:66998954:+ chr12:57783110:+ INFRAME NA TCGA-50-5066-01A-01R-1628-07 CWC25-B4GALNT2 4 9 chr17:38820901:- chr17:49141247:+ INFRAME NA TCGA-50-5066-01A-01R-1628-07 ZNF3-RUNDC3B 4 7 chr7:100075135:- chr7:87693908:+ INFRAME NA TCGA-50-5066-01A-01R-1628-07 TMED5-TMIGD3 2 4 chr1:93180054:- chr1:111485840:- FRAMESHIFT NA TCGA-50-5066-01A-01R-1628-07 TSPAN4-EPS8L2 1 1 chr11:847300:+ chr11:720062:+ . NA TCGA-50-5072-01A-21R-1858-07 CYP2B7P-EGLN2 1 12 chr19:40924443:+ chr19:40807809:+ . NA TCGA-50-5072-01A-21R-1858-07 RRBP1-TASP1 1 12 chr20:17633460:- chr20:13417521:- FRAMESHIFT NA TCGA-50-5072-01A-21R-1858-07 TAF4-TSHZ2 2 6 chr20:61997550:- chr20:53487144:+ . NA TCGA-50-5072-01A-21R-1858-07 TMEM87B-MERTK 1 6 chr2:112055756:+ chr2:111994251:+ INFRAME NA TCGA-50-5072-01A-21R-1858-07 SNAI1-PFDN4 1 5 chr20:49984351:+ chr20:54219019:+ FRAMESHIFT NA TCGA-50-5072-01A-21R-1858-07 ERO1B-HEATR1 1 1 chr1:236225070:- chr1:236558529:- INFRAME NA TCGA-50-5930-01A-11R-1755-07 PPWD1-NLN 3 3 chr5:65579613:+ chr5:65780179:+ INFRAME NA TCGA-50-5930-01A-11R-1755-07 ZNF264-PIGG 2 5 chr19:57194001:+ chr4:521056:+ INFRAME NA TCGA-50-5930-01A-11R-1755-07 UNC93B1-C11orf72 1 7 chr11:68003022:- chr11:67606011:- . NA TCGA-50-5930-01A-11R-1755-07 GANC-SNAP23 1 2 chr15:42297656:+ chr15:42528262:+ FRAMESHIFT NA TCGA-50-5931-01A-11R-1755-07 B3GNT2-KYNU 1 1 chr2:62196355:+ chr2:143040428:+ . NA TCGA-50-5932-01A-11R-1755-07 RPS6KC1-CD34 18 42 chr1:213117410:+ chr1:207900003:- INFRAME NA TCGA-50-5932-01A-11R-1755-07 DENND1B-RCOR3 1 11 chr1:197715031:- chr1:211260108:+ FRAMESHIFT NA TCGA-50-5933-01A-11R-1755-07 HDLBP-CADM2 1 6 chr2:241315570:- chr3:85802047:+ . NA TCGA-50-5933-01A-11R-1755-07 HOOK3-TM2D2 1 6 chr8:42906258:+ chr8:38995693:- . NA TCGA-50-5935-01A-11R-1755-07 ADIPOR2-ST8SIA1 14 62 chr12:1691213:+ chr12:22070625:- . NA TCGA-50-5935-01A-11R-1755-07 MGST1-SLCO1A2 3 3 chr12:16347710:+ chr12:21334709:- . NA TCGA-50-5936-01A-11R-1628-07 CCDC6-SLC16A9 1 4 chr10:59794473:- chr10:59684327:- . NA TCGA-50-5941-01A-11R-1755-07 POMT1-NUP214 3 19 chr9:131503073:+ chr9:131215212:+ . NA TCGA-50-5941-01A-11R-1755-07 PDE9A-ABCG1 3 18 chr21:42653883:+ chr21:42225671:+ INFRAME NA TCGA-50-5941-01A-11R-1755-07 PPP2R1A-TGFB1 3 12 chr19:52206063:+ chr19:41302720:- INFRAME NA TCGA-50-5941-01A-11R-1755-07 STK24-TRIQK 2 9 chr13:98576745:- chr8:92917010:- . NA TCGA-50-5941-01A-11R-1755-07 LCOR-PNLIPRP3 2 5 chr10:96833479:+ chr10:116443055:+ . NA TCGA-50-5941-01A-11R-1755-07 ATG13-ELP4 1 7 chr11:46617890:+ chr11:31783393:+ . NA TCGA-50-5944-01A-11R-1755-07 SRFBP1-PRM1 22 74 chr5:121994670:+ chr16:11281230:- FRAMESHIFT NA TCGA-50-5944-01A-11R-1755-07 SRP68-RCAN1 5 25 chr17:76063976:- chr21:34523710:- INFRAME NA TCGA-50-5944-01A-11R-1755-07 MYO10-ZNF622 2 16 chr5:16877609:- chr5:16458629:- FRAMESHIFT NA TCGA-50-5944-01A-11R-1755-07 ZNF205-UBE2I 5 1 chr16:3113487:+ chr16:1320438:+ INFRAME NA TCGA-50-5944-01A-11R-1755-07 WRB-KCNJ15 1 12 chr21:39410937:+ chr21:38296926:+ . NA TCGA-50-5944-01A-11R-1755-07 HLCS-GRIK1 2 3 chr21:36896860:- chr21:29598937:- FRAMESHIFT NA TCGA-50-5944-01A-11R-1755-07 RTFDC1-ARHGAP26 1 6 chr20:56468766:+ chr5:142873400:+ FRAMESHIFT NA TCGA-50-5944-01A-11R-1755-07 MAN2A1-ATAD3C 1 3 chr5:109789527:+ chr1:1468384:+ FRAMESHIFT NA TCGA-50-5946-01A-11R-1755-07 TANC2-CRB3 38 152 chr17:63267873:+ chr19:6465545:+ INFRAME NA TCGA-50-5946-01A-11R-1755-07 RFX2-EPOR 8 43 chr19:6110393:- chr19:11378778:- . NA TCGA-50-5946-01A-11R-1755-07 ZNF91-CCDC88A 1 57 chr19:23373742:- chr2:55296523:- INFRAME NA TCGA-50-5946-01A-11R-1755-07 UNK-ZNF266 4 38 chr17:75784984:+ chr19:9420218:- . NA TCGA-50-5946-01A-11R-1755-07 ANKRD18B-SNX30 4 12 chr9:33550579:+ chr9:112836214:+ INFRAME NA TCGA-50-6590-01A-12R-1858-07 POFUT1-ITCH 13 34 chr20:32216721:+ chr20:34442208:+ INFRAME NA TCGA-50-6590-01A-12R-1858-07 TBC1D14-BRSK2 5 1 chr4:6924111:+ chr11:1436040:+ FRAMESHIFT NA TCGA-50-6590-01A-12R-1858-07 PCGF3-FAM86MP 1 12 chr4:735027:+ chr4:9702896:+ . NA TCGA-50-6591-01A-11R-1755-07 ZNF417-BAX 64 158 chr19:57912060:- chr19:48960810:+ INFRAME NA TCGA-50-6591-01A-11R-1755-07 GLI3-HIBADH 4 38 chr7:42148226:- chr7:27632445:- INFRAME NA TCGA-50-6591-01A-11R-1755-07 PDS5B-CD3EAP 2 17 chr13:32586593:+ chr19:45407094:+ . NA TCGA-50-6591-01A-11R-1755-07 SMARCA4-FOXO1 1 21 chr19:11041560:+ chr13:40474095:- . Likely Oncogenic NA TCGA-50-6591-01A-11R-1755-07 DEF8-FBXO31 1 7 chr16:89964575:+ chr16:87331510:- INFRAME NA TCGA-50-6591-01A-11R-1755-07 TRERF1-GNMT 1 6 chr6:42362997:- chr6:42962212:+ . NA TCGA-50-6592-01A-11R-1755-07 GTF2E2-GSR 5 38 chr8:30653433:- chr8:30693055:- FRAMESHIFT NA TCGA-50-6592-01A-11R-1755-07 ERCC3-MAP3K2 2 8 chr2:127280447:- chr2:127314883:- INFRAME Likely Oncogenic NA TCGA-50-6592-01A-11R-1755-07 CHIC2-MANBA 1 7 chr4:54048955:- chr4:102690771:- FRAMESHIFT NA TCGA-50-6592-01A-11R-1755-07 ANK2-ALPK1 1 4 chr4:112904514:+ chr4:112438484:+ FRAMESHIFT NA TCGA-50-6593-01A-11R-1755-07 CCDC43-ATP11A 13 66 chr17:44689550:- chr13:112717322:+ . NA TCGA-50-6594-01A-11R-1755-07 SPINT2-DPF1 53 88 chr19:38264998:+ chr19:38222708:- FRAMESHIFT NA TCGA-50-6594-01A-11R-1755-07 JARID2-ATM 1 19 chr6:15246584:+ chr11:108343222:+ INFRAME Likely Oncogenic NA TCGA-50-6594-01A-11R-1755-07 ASPHD2-DDX17 2 2 chr22:26429486:+ chr22:38492115:- . NA TCGA-50-6595-01A-12R-1858-07 MBTD1-PHB 2 5 chr17:51259143:- chr17:49413291:- . NA TCGA-50-6595-01A-12R-1858-07 FXR1-RPH3A 1 2 chr3:180957928:+ chr12:112718006:+ . NA TCGA-50-6673-01A-11R-1949-07 UNK-B4GALNT2 23 126 chr17:75784984:+ chr17:49141247:+ INFRAME NA TCGA-50-6673-01A-11R-1949-07 TMEM107-WRAP53 29 45 chr17:8176200:- chr17:7700741:+ INFRAME NA TCGA-50-6673-01A-11R-1949-07 FAM222B-UNC5D 10 61 chr17:28812209:- chr8:35750582:+ . NA TCGA-50-6673-01A-11R-1949-07 COBL-DUSP14 11 38 chr7:51085166:- chr17:37510677:+ . NA TCGA-50-6673-01A-11R-1949-07 RNF170-SFRP1 5 27 chr8:42887728:- chr8:41265489:- FRAMESHIFT NA TCGA-50-6673-01A-11R-1949-07 POLR2A-NAA38 3 16 chr17:7484857:+ chr17:7858831:- . NA TCGA-50-6673-01A-11R-1949-07 PDIA4-TADA2A 5 7 chr7:149003944:- chr17:37465431:+ FRAMESHIFT NA TCGA-50-6673-01A-11R-1949-07 ARHGAP5-TPGS2 1 6 chr14:32077435:+ chr18:36807934:- FRAMESHIFT NA TCGA-50-7109-01A-11R-2039-07 MYO10-NOL7 1 5 chr5:16818009:- chr6:13620208:+ FRAMESHIFT NA TCGA-50-8460-01A-11R-2326-07 MINK1-NQO2 9 50 chr17:4833640:+ chr6:3010025:+ INFRAME NA TCGA-50-8460-01A-11R-2326-07 CHI3L1-SFTPB 1 38 chr1:203182731:- chr2:85659682:- . NA TCGA-50-8460-01A-11R-2326-07 TMEM41B-TEKT1 5 10 chr11:9299584:- chr17:6815962:- INFRAME NA TCGA-53-7624-01A-11R-2066-07 NCOA2-LEPROTL1 3 20 chr8:70403700:- chr8:30101898:+ . NA TCGA-53-7624-01A-11R-2066-07 TYMP-SYCE3 2 6 chr22:50528512:- chr22:50551402:- FRAMESHIFT NA TCGA-53-7813-01A-11R-2170-07 BAD-STX5 2 2 chr11:64271613:- chr11:62807628:- FRAMESHIFT NA TCGA-53-7813-01A-11R-2170-07 MAP4K4-MUCL1 1 5 chr2:101698538:+ chr12:54855116:+ FRAMESHIFT NA TCGA-53-A4EZ-01A-12R-A24X-07 MACROD1-PLA2G16 19 34 chr11:64151239:- chr11:63614068:- . NA TCGA-53-A4EZ-01A-12R-A24X-07 NUMA1-TRPT1 8 71 chr11:72004640:- chr11:64225869:- . NA TCGA-53-A4EZ-01A-12R-A24X-07 SF1-SYT7 7 64 chr11:64778362:- chr11:61533124:- FRAMESHIFT NA TCGA-53-A4EZ-01A-12R-A24X-07 POLA2-OOSP1 4 40 chr11:65282521:+ chr11:59942847:+ . NA TCGA-53-A4EZ-01A-12R-A24X-07 THAP12-POLD4 5 20 chr11:76380748:- chr11:67353077:- FRAMESHIFT NA TCGA-53-A4EZ-01A-12R-A24X-07 CMC2-PZP 2 18 chr16:81006734:- chr12:9160025:- . NA TCGA-53-A4EZ-01A-12R-A24X-07 DNAJC4-CDC42EP2 1 1 chr11:64231964:+ chr11:65320544:+ . NA TCGA-55-1592-01A-01R-0946-07 RARA-STAC2 23 86 chr17:40318448:+ chr17:39218173:- . NA TCGA-55-1592-01A-01R-0946-07 BMP2K-SLC25A31 15 56 chr4:78865720:+ chr4:127773386:+ FRAMESHIFT NA TCGA-55-1592-01A-01R-0946-07 DNAJC17-CIB2 1 43 chr15:40807369:- chr15:78123739:- INFRAME NA TCGA-55-1592-01A-01R-0946-07 FGF13-STK26 5 11 chrX:139204059:- chrX:132054631:+ FRAMESHIFT NA TCGA-55-1592-01A-01R-0946-07 CELF1-MYOM1 4 12 chr11:47552992:- chr18:3131496:- . NA TCGA-55-1592-01A-01R-0946-07 MNAT1-SIX1 1 16 chr14:60734951:+ chr14:60646577:- INFRAME NA TCGA-55-1592-01A-01R-0946-07 ITPR2-RASSF3 3 4 chr12:26790157:- chr12:64684787:+ FRAMESHIFT NA TCGA-55-1592-01A-01R-0946-07 RASSF3-CCDC120 1 9 chr12:64691579:+ chrX:49067176:+ FRAMESHIFT NA TCGA-55-1592-01A-01R-0946-07 BTRC-IKZF3 1 4 chr10:101462058:+ chr17:39832151:- FRAMESHIFT NA TCGA-55-1594-01A-01R-0946-07 AFMID-IGHJ4 12 0 chr17:78190764:+ chr14:105864254:- . NA TCGA-55-1594-01A-01R-0946-07 MIPOL1-SFTA3 2 18 chr14:37198104:+ chr14:36477098:- . NA TCGA-55-1594-01A-01R-0946-07 TLDC2-DYNLRB1 1 2 chr20:36889403:+ chr20:34534628:+ . NA TCGA-55-1595-01A-01R-0946-07 CD2AP-SUPT3H 2 29 chr6:47533755:+ chr6:45106006:- FRAMESHIFT NA TCGA-55-1595-01A-01R-0946-07 FAM222B-CHD7 3 21 chr17:28812209:- chr8:60741259:+ . NA TCGA-55-1596-01A-01R-0946-07 NCAPD2-VWF 82 54 chr12:6494154:+ chr12:5949883:- . NA TCGA-55-1596-01A-01R-0946-07 MROH2B-MRPS30 18 96 chr5:41017850:- chr5:44813106:+ INFRAME NA TCGA-55-1596-01A-01R-0946-07 MAP3K8-MROH2B 11 35 chr10:30434378:+ chr5:41019018:- . NA TCGA-55-1596-01A-01R-0946-07 UBA52-CACNA1C 1 10 chr19:18573748:+ chr12:2611903:+ FRAMESHIFT NA TCGA-55-1596-01A-01R-0946-07 MALRD1-GPR158 1 2 chr10:19283181:+ chr10:25466651:+ FRAMESHIFT NA TCGA-55-6543-01A-11R-1755-07 EPB41L4A-PLAC8L1 11 39 chr5:112418941:- chr5:146098292:- FRAMESHIFT NA TCGA-55-6543-01A-11R-1755-07 WAPL-NRP1 1000 1000 chr10:86446305:- chr10:33221847:- INFRAME NA TCGA-55-6642-01A-11R-1858-07 CUL2-PARD3 2 27 chr10:35044566:- chr10:34517159:- INFRAME NA TCGA-55-6642-01A-11R-1858-07 FUT10-NDUFV2 2 3 chr8:33461372:- chr18:9117838:+ INFRAME NA TCGA-55-6642-01A-11R-1858-07 ARHGEF12-CNTN5 1 4 chr11:120407823:+ chr11:99916054:+ INFRAME NA TCGA-55-6712-01A-11R-1858-07 VBP1-GABRA3 13 155 chrX:155216575:+ chrX:152224845:- FRAMESHIFT NA TCGA-55-6712-01A-11R-1858-07 AKIRIN1-MEAF6 12 60 chr1:38998311:+ chr1:37501996:- INFRAME NA TCGA-55-6712-01A-11R-1858-07 PHIP-FTO 4 79 chr6:79042843:- chr16:54111762:+ FRAMESHIFT NA TCGA-55-6712-01A-11R-1858-07 PUM1-SKINT1L 8 54 chr1:30945346:- chr1:48096590:- . NA TCGA-55-6712-01A-11R-1858-07 MTM1-VBP1 4 44 chrX:150619139:+ chrX:155220183:+ INFRAME NA TCGA-55-6712-01A-11R-1858-07 ARF3-CHFR 1 22 chr12:48940948:- chr12:132887340:- . NA TCGA-55-6712-01A-11R-1858-07 FBXO34-NID2 1 5 chr14:55355222:+ chr14:52042931:- . NA TCGA-55-6968-01A-11R-1949-07 GSE1-GLYR1 22 81 chr16:85556363:+ chr16:4805310:- FRAMESHIFT NA TCGA-55-6968-01A-11R-1949-07 STK39-SCN3A 2 3 chr2:168129541:- chr2:165155903:- FRAMESHIFT NA TCGA-55-6968-01A-11R-1949-07 RBMS1-METTL8 2 1 chr2:160493289:- chr2:171339554:- FRAMESHIFT NA TCGA-55-6969-01A-11R-1949-07 RAB11FIP1-ATP6V1H 4 48 chr8:37862737:- chr8:53801896:- . NA TCGA-55-6969-01A-11R-1949-07 ZNF229-ERCC1 3 27 chr19:44447513:- chr19:45423381:- . NA TCGA-55-6969-01A-11R-1949-07 ADAM10-ALDH1A2 3 25 chr15:58749480:- chr15:58420105:- . NA TCGA-55-6969-01A-11R-1949-07 PCM1-TEX15 3 13 chr8:17993619:+ chr8:30860057:- INFRAME NA TCGA-55-6969-01A-11R-1949-07 IPO7-AKIP1 3 10 chr11:9420698:+ chr11:8914826:+ INFRAME NA TCGA-55-6969-01A-11R-1949-07 PACS2-C14orf180 2 8 chr14:105355177:+ chr14:104586415:+ . NA TCGA-55-6969-01A-11R-1949-07 CLOCK-NMU 1 8 chr4:55455897:- chr4:55595411:- . NA TCGA-55-6969-01A-11R-1949-07 STUM-VTI1A 2 3 chr1:226549106:+ chr10:112527087:+ FRAMESHIFT NA TCGA-55-6969-01A-11R-1949-07 TUBD1-TOM1L1 1 5 chr17:59886083:- chr17:54912666:+ INFRAME NA TCGA-55-6969-01A-11R-1949-07 NBEAL1-CARF 1 4 chr2:203157825:+ chr2:202952559:+ FRAMESHIFT NA TCGA-55-6969-01A-11R-1949-07 GSK3A-CXCL17 1 2 chr19:42239955:- chr19:42428981:- FRAMESHIFT NA TCGA-55-6969-01A-11R-1949-07 WDR45B-JDP2 1 2 chr17:82643949:- chr14:75437898:+ INFRAME NA TCGA-55-6971-01A-11R-1949-07 TRAPPC8-ANK3 19 89 chr18:31942608:- chr10:60205890:- FRAMESHIFT NA TCGA-55-6971-01A-11R-1949-07 GOSR1-AP2B1 11 35 chr17:30492753:+ chr17:35682695:+ INFRAME NA TCGA-55-6971-01A-11R-1949-07 MCOLN2-CDK1 6 13 chr1:84996796:- chr10:60780141:+ . NA TCGA-55-6971-01A-11R-1949-07 SFTPB-MPC1 3 1 chr2:85666616:- chr6:166365449:- . NA TCGA-55-6971-01A-11R-1949-07 SLC43A2-PRPF8 1 9 chr17:1613195:- chr17:1662153:- INFRAME NA TCGA-55-6972-01A-11R-1949-07 RFTN1-DAZL 3 23 chr3:16409375:- chr3:16598598:- INFRAME NA TCGA-55-6972-01A-11R-1949-07 TCF7L1-DNAH6 1 11 chr2:85134450:+ chr2:84745080:+ FRAMESHIFT NA TCGA-55-6972-01A-11R-1949-07 TTC39A-PHGDH 1 10 chr1:51321721:- chr1:119721170:+ FRAMESHIFT NA TCGA-55-6972-01A-11R-1949-07 PPP3R1-CNRIP1 1 7 chr2:68186468:- chr2:68317307:- FRAMESHIFT NA TCGA-55-6972-01A-11R-1949-07 LDLR-C19orf38 1 4 chr19:11100345:+ chr19:10858316:+ INFRAME NA TCGA-55-6972-01A-11R-1949-07 ST6GAL1-KNG1 1 4 chr3:187043310:+ chr3:186743705:+ FRAMESHIFT NA TCGA-55-6972-01A-11R-1949-07 EZR-SLC22A2 1 3 chr6:158783520:- chr6:160171437:- . NA TCGA-55-6975-01A-11R-1949-07 E2F5-CA3 5 13 chr8:85212204:+ chr8:85439712:+ INFRAME NA TCGA-55-6975-01A-11R-1949-07 CTNNA1-SLC38A9 2 20 chr5:138753510:+ chr5:55697992:- . NA TCGA-55-6975-01A-11R-1949-07 ANAPC15-RAI14 2 5 chr11:72110088:- chr5:34757468:+ INFRAME NA TCGA-55-6978-01A-11R-1949-07 ATXN1-ARG1 3 61 chr6:16657776:- chr6:131576663:+ . NA TCGA-55-6978-01A-11R-1949-07 KHDRBS2-LMBRD1 4 9 chr6:62285858:- chr6:69676541:- INFRAME NA TCGA-55-6978-01A-11R-1949-07 MKL1-APOL4 4 9 chr22:40636478:- chr22:36202055:- . NA TCGA-55-6978-01A-11R-1949-07 GCNT2-OSM 2 6 chr6:10528841:+ chr22:30265144:- . NA TCGA-55-6978-01A-11R-1949-07 GRK3-CHEK2 1 2 chr22:25714570:+ chr22:28699937:- FRAMESHIFT NA TCGA-55-6981-01A-11R-1949-07 COPE-TMEM59L 5 41 chr19:18919223:- chr19:18613872:+ INFRAME NA TCGA-55-6982-01A-11R-1949-07 P3H1-ERI3 10 39 chr1:42762323:- chr1:44221640:- FRAMESHIFT NA TCGA-55-6982-01A-11R-1949-07 SLC12A7-TMEM117 8 30 chr5:1094154:- chr12:44299580:+ FRAMESHIFT NA TCGA-55-6982-01A-11R-1949-07 RPRD1A-GAREM1 1 4 chr18:36026900:- chr18:32136460:- INFRAME NA TCGA-55-6983-01A-11R-1949-07 COL5A2-SFTPB 1000 1000 chr2:189032534:- chr2:85666732:- . NA TCGA-55-6985-01A-11R-1949-07 PASK-BOK 2 7 chr2:241140521:- chr2:241570125:+ FRAMESHIFT NA TCGA-55-6986-01A-11R-1949-07 DNM1L-ITPR2 5 17 chr12:32679465:+ chr12:26436346:- FRAMESHIFT NA TCGA-55-6987-01A-11R-1949-07 PIGK-SLC25A3P1 21 94 chr1:77166719:- chr1:53417666:- . NA TCGA-55-6987-01A-11R-1949-07 LRP8-USP24 4 14 chr1:53326873:- chr1:55097172:- FRAMESHIFT NA TCGA-55-6987-01A-11R-1949-07 BRWD1-SMC1A 2 6 chr21:39196498:- chrX:53415169:- INFRAME NA TCGA-55-6987-01A-11R-1949-07 SYNE1-METTL24 3 2 chr6:152249161:- chr6:110246260:- INFRAME NA TCGA-55-6987-01A-11R-1949-07 NAV1-IPO9 1 3 chr1:201649425:+ chr1:201847279:+ INFRAME NA TCGA-55-6987-01A-11R-1949-07 NQO1-JAG1 1 2 chr16:69726433:- chr20:10641244:- FRAMESHIFT NA TCGA-55-7281-01A-11R-2039-07 NOTCH2-ADAM30 1000 1000 chr1:119935472:- chr1:119894596:- FRAMESHIFT NA TCGA-55-7283-01A-11R-2039-07 TRIO-DNAH5 2 9 chr5:14390990:+ chr5:13931244:- INFRAME NA TCGA-55-7570-01A-11R-2039-07 PXN-MSI1 1 5 chr12:120265617:- chr12:120364755:- FRAMESHIFT NA TCGA-55-7570-01A-11R-2039-07 PACS1-SLN 1 2 chr11:66070842:+ chr11:107708005:- . NA TCGA-55-7574-01A-11R-2039-07 ARHGEF10L-TMCO4 3 1 chr1:17539950:+ chr1:19780766:- . NA TCGA-55-7576-01A-11R-2066-07 UBXN4-R3HDM1 12 75 chr2:135748369:+ chr2:135709433:+ INFRAME NA TCGA-55-7576-01A-11R-2066-07 DCAF6-TIPRL 10 39 chr1:167937008:+ chr1:168196547:+ FRAMESHIFT NA TCGA-55-7576-01A-11R-2066-07 NAV2-CNTN5 6 48 chr11:19868997:+ chr11:100255760:+ INFRAME NA TCGA-55-7576-01A-11R-2066-07 ABR-YWHAE 6 34 chr17:1050050:- chr17:1354347:- INFRAME NA TCGA-55-7576-01A-11R-2066-07 DCAF6-ILDR2 7 24 chr1:167937008:+ chr1:166939570:- INFRAME NA TCGA-55-7576-01A-11R-2066-07 FOXJ3-CLIC6 7 20 chr1:42265115:- chr21:34707280:+ INFRAME NA TCGA-55-7576-01A-11R-2066-07 SLC16A5-OTOP2 2 24 chr17:75089304:+ chr17:74927223:+ . NA TCGA-55-7576-01A-11R-2066-07 ZNRF3-EWSR1 2 11 chr22:28884066:+ chr22:29296239:+ INFRAME Likely Oncogenic NA TCGA-55-7576-01A-11R-2066-07 RNF10-SIRT4 1 13 chr12:120560886:+ chr12:120312456:+ FRAMESHIFT NA TCGA-55-7576-01A-11R-2066-07 LYST-NID1 1 7 chr1:235770160:- chr1:235985505:- INFRAME NA TCGA-55-7725-01A-11R-2170-07 LAPTM4B-ARFGEF1 3 1 chr8:97776108:+ chr8:67302466:- FRAMESHIFT NA TCGA-55-7726-01A-11R-2170-07 PTBP3-SVEP1 1 27 chr9:112333470:- chr9:110377366:- FRAMESHIFT NA TCGA-55-7727-01A-11R-2170-07 B4GALT1-FAM205C 12 84 chr9:33135189:- chr9:34895084:- INFRAME NA TCGA-55-7815-01A-11R-2170-07 ITCH-MYL9 4 18 chr20:34492597:+ chr20:36548032:+ INFRAME NA TCGA-55-7815-01A-11R-2170-07 BAIAP2L1-LRRC23 1 6 chr7:98355042:- chr12:6883704:+ . NA TCGA-55-7815-01A-11R-2170-07 BAIAP2L1-RPL13P5 1 6 chr7:98355042:- chr12:6883704:+ . NA TCGA-55-7815-01A-11R-2170-07 ETHE1-BMP5 1 2 chr19:43526515:- chr6:55774243:- INFRAME NA TCGA-55-7903-01A-11R-2170-07 FZR1-NCLN 6 48 chr19:3523058:+ chr19:3201523:+ INFRAME NA TCGA-55-7903-01A-11R-2170-07 SHC1-ASH1L 2 53 chr1:154974248:- chr1:155339368:- . NA TCGA-55-7903-01A-11R-2170-07 CNOT9-ARPC2 3 20 chr2:218568978:+ chr2:218234352:+ INFRAME NA TCGA-55-7903-01A-11R-2170-07 TRIB1-NSMCE2 3 12 chr8:125433609:+ chr8:125357219:+ FRAMESHIFT NA TCGA-55-7907-01A-11R-2170-07 UNC50-STARD7 4 12 chr2:98610895:+ chr2:96193352:- FRAMESHIFT NA TCGA-55-7907-01A-11R-2170-07 TMEM132D-STX2 2 2 chr12:129903261:- chr12:130813031:- INFRAME NA TCGA-55-7910-01A-11R-2170-07 CTNND2-GPI 2 6 chr5:11159576:- chr19:34393914:+ FRAMESHIFT NA TCGA-55-7911-01A-11R-2170-07 SLC25A17-ST13 7 33 chr22:40773937:- chr22:40850880:- INFRAME NA TCGA-55-7911-01A-11R-2170-07 BMPR2-KIAA2012 6 23 chr2:202377550:+ chr2:202138432:+ INFRAME NA TCGA-55-7911-01A-11R-2170-07 MMP28-KCNJ18 3 10 chr17:35778888:- chr17:21695983:+ . NA TCGA-55-7913-01B-11R-2241-07 C6orf106-NUDT3 5 84 chr6:34646601:- chr6:34341972:- FRAMESHIFT NA TCGA-55-7913-01B-11R-2241-07 SPDEF-VSTM2B 8 9 chr6:34555929:- chr19:29563846:+ . NA TCGA-55-7913-01B-11R-2241-07 STAG2-GRIA3 3 9 chrX:124031125:+ chrX:123326026:+ FRAMESHIFT Likely Oncogenic NA TCGA-55-7913-01B-11R-2241-07 SLC12A2-CSNK1A1 2 5 chr5:128084710:+ chr5:149520388:- INFRAME NA TCGA-55-7913-01B-11R-2241-07 NECTIN2-SCN1B 2 3 chr19:44874478:+ chr19:35032528:+ INFRAME NA TCGA-55-7913-01B-11R-2241-07 CLIC6-ITSN1 1 4 chr21:34670762:+ chr21:33882243:+ INFRAME NA TCGA-55-7914-01A-11R-2170-07 CDKL2-CXCL11 11 68 chr4:75625821:- chr4:76036064:- . NA TCGA-55-7914-01A-11R-2170-07 MUC1-IGHA1 3 22 chr1:155188411:- chr14:105708135:- INFRAME NA TCGA-55-7994-01A-11R-2187-07 TSC22D4-IGLV3-26 24 82 chr7:100478794:- chr22:22673338:+ . NA TCGA-55-7994-01A-11R-2187-07 PRKAA1-TBC1D5 10 35 chr5:40798063:- chr3:17214370:- INFRAME NA TCGA-55-7995-01A-11R-2187-07 ZNF727-SND1 57 89 chr7:64045624:+ chr7:128074502:+ INFRAME NA TCGA-55-7995-01A-11R-2187-07 XRCC2-ACTR3C 6 5 chr7:152676041:- chr7:150249054:- INFRAME Likely Oncogenic NA TCGA-55-7995-01A-11R-2187-07 HERC3-RASGEF1B 2 11 chr4:88606049:+ chr4:81602922:- FRAMESHIFT NA TCGA-55-7995-01A-11R-2187-07 XPNPEP3-EFCAB6 1 8 chr22:40870139:+ chr22:43683855:- . NA TCGA-55-7995-01A-11R-2187-07 DMKN-NUMBL 1 3 chr19:35510184:- chr19:40686995:- INFRAME NA TCGA-55-7995-01A-11R-2187-07 LIMS1-PTP4A2 1 3 chr2:108534594:+ chr1:31919658:- . NA TCGA-55-8085-01A-11R-2241-07 CHP1-RAD51 10 29 chr15:41270618:+ chr15:40718805:+ INFRAME NA TCGA-55-8085-01A-11R-2241-07 PBRM1-TMEM110 7 21 chr3:52550421:- chr3:52855444:- INFRAME Likely Oncogenic NA TCGA-55-8085-01A-11R-2241-07 RPS6KA1-LIN28A 7 21 chr1:26558937:+ chr1:26425303:+ INFRAME NA TCGA-55-8085-01A-11R-2241-07 TFCP2L1-CLASP1 3 13 chr2:121246818:- chr2:121461193:- INFRAME NA TCGA-55-8087-01A-11R-2241-07 TPD52L2-PDZRN4 15 188 chr20:63869441:+ chr12:41506456:+ INFRAME NA TCGA-55-8087-01A-11R-2241-07 ASXL1-RPL37P1 4 47 chr20:32360853:+ chr20:35588396:+ . Likely Oncogenic NA TCGA-55-8087-01A-11R-2241-07 VPS53-ZZEF1 4 10 chr17:697418:- chr17:4124051:- INFRAME NA TCGA-55-8087-01A-11R-2241-07 ACTR5-ZNF217 1 4 chr20:38766377:+ chr20:53571853:- FRAMESHIFT NA TCGA-55-8089-01A-11R-2241-07 HAS2-HHLA1 26 115 chr8:121640853:- chr8:132100134:- . NA TCGA-55-8089-01A-11R-2241-07 KLHL7-DNAH11 12 122 chr7:23106146:+ chr7:21545006:+ INFRAME NA TCGA-55-8089-01A-11R-2241-07 VOPP1-RAPGEF5 1 26 chr7:55572271:- chr7:22318037:- INFRAME NA TCGA-55-8089-01A-11R-2241-07 TNS3-PSPH 2 8 chr7:47582051:- chr7:56019734:- . NA TCGA-55-8089-01A-11R-2241-07 STEAP1B-POU6F2 2 6 chr7:22492565:- chr7:39085860:+ INFRAME NA TCGA-55-8090-01A-11R-2241-07 GSAP-FMNL2 1 12 chr7:77349351:- chr2:152521943:+ INFRAME NA TCGA-55-8091-01A-11R-2241-07 ITGB6-SH3PXD2B 1000 1000 chr2:160169212:- chr5:172422496:- INFRAME NA TCGA-55-8094-01A-11R-2241-07 MTUS1-FGL1 67 166 chr8:17713214:- chr8:17869004:- INFRAME NA TCGA-55-8094-01A-11R-2241-07 DYNLT3-U2AF2 10 82 chrX:37841028:- chr19:55668507:+ INFRAME NA TCGA-55-8094-01A-11R-2241-07 PLAUR-XRCC1 2 2 chr19:43652225:- chr19:43546106:- INFRAME NA TCGA-55-8094-01A-11R-2241-07 TRMT1-GCDH 1 5 chr19:13115279:- chr19:12900234:+ . NA TCGA-55-8094-01A-11R-2241-07 BICD1-NAPB 1 3 chr12:32107544:+ chr20:23381317:- INFRAME NA TCGA-55-8096-01A-11R-2241-07 PTPN12-GGNBP2 3 19 chr7:77639324:+ chr17:36567663:+ . NA TCGA-55-8096-01A-11R-2241-07 MAP4K5-NIN 1 4 chr14:50464052:- chr14:50752733:- INFRAME NA TCGA-55-8097-01A-11R-2241-07 GSS-TTI1 1 9 chr20:34941713:- chr20:37999328:- FRAMESHIFT NA TCGA-55-8097-01A-11R-2241-07 CHD6-TSHZ2 1 1 chr20:41618340:- chr20:53253499:+ . NA TCGA-55-8205-01A-11R-2241-07 SPTB-RAB15 1 2 chr14:64796557:- chr14:64948733:- INFRAME NA TCGA-55-8206-01A-11R-2241-07 PHF20-ZFAS1 18 374 chr20:35801605:+ chr20:49289045:+ . NA TCGA-55-8206-01A-11R-2241-07 DZANK1-DTD1 27 179 chr20:18448984:- chr20:18763360:+ . NA TCGA-55-8206-01A-11R-2241-07 DSTN-DZANK1 11 83 chr20:17570211:+ chr20:18455361:- FRAMESHIFT NA TCGA-55-8206-01A-11R-2241-07 CPNE1-GNAS 10 33 chr20:35664760:- chr20:58903531:+ . NA TCGA-55-8206-01A-11R-2241-07 RBM12-GNAS 10 33 chr20:35664760:- chr20:58903531:+ . NA TCGA-55-8206-01A-11R-2241-07 BCAS4-PHF20 7 37 chr20:50841900:+ chr20:35913249:+ FRAMESHIFT NA TCGA-55-8206-01A-11R-2241-07 CDK5RAP1-GNAS 4 32 chr20:33392143:- chr20:58903527:+ . NA TCGA-55-8206-01A-11R-2241-07 EXD2-GMEB2 2 2 chr14:69209803:+ chr20:63619454:- . NA TCGA-55-8206-01A-11R-2241-07 PTPRT-EXD2 1 4 chr20:42756462:- chr14:69228816:+ FRAMESHIFT Likely Oncogenic NA TCGA-55-8207-01A-11R-2241-07 RPL26-CYSTM1 80 350 chr17:8382143:- chr5:140194446:+ . NA TCGA-55-8299-01A-11R-2287-07 LMAN2-F12 38 66 chr5:177334284:- chr5:177404090:- INFRAME NA TCGA-55-8301-01A-11R-2287-07 RHPN2-VSTM2B 2 16 chr19:33064784:- chr19:29563846:+ FRAMESHIFT NA TCGA-55-8301-01A-11R-2287-07 DCAF1-POC1A 3 5 chr3:51463114:- chr3:52151100:- INFRAME NA TCGA-55-8301-01A-11R-2287-07 MCM7-TSC22D4 1 4 chr7:100095774:- chr7:100467600:- INFRAME NA TCGA-55-8301-01A-11R-2287-07 SETD2-PRSS50 1 4 chr3:47163854:- chr3:46720003:- . Likely Oncogenic NA TCGA-55-8505-01A-11R-2403-07 SMARCA4-DOCK6 27 108 chr19:11019701:+ chr19:11201052:- INFRAME Likely Oncogenic NA TCGA-55-8505-01A-11R-2403-07 RDH13-PPP6R1 3 45 chr19:55056653:- chr19:55247109:- . NA TCGA-55-8505-01A-11R-2403-07 EPS8L2-DCDC1 5 27 chr11:710486:+ chr11:31137784:- INFRAME NA TCGA-55-8506-01A-11R-2403-07 PCNX1-RAD51B 22 312 chr14:70908003:+ chr14:68291884:+ INFRAME NA TCGA-55-8506-01A-11R-2403-07 NUP107-SHD 6 32 chr12:68715740:+ chr19:4290447:+ FRAMESHIFT NA TCGA-55-8506-01A-11R-2403-07 MAMSTR-SULT2B1 2 46 chr19:48713716:- chr19:48599135:+ INFRAME NA TCGA-55-8506-01A-11R-2403-07 SGSM3-TNRC6B 7 25 chr22:40408842:+ chr22:40300455:+ INFRAME NA TCGA-55-8506-01A-11R-2403-07 WDR34-ZER1 2 25 chr9:128656541:- chr9:128733528:- FRAMESHIFT NA TCGA-55-8507-01A-11R-2403-07 IFI6-STPG1 16 84 chr1:27668226:- chr1:24391679:- INFRAME NA TCGA-55-8507-01A-11R-2403-07 RICTOR-DTNBP1 7 38 chr5:39074111:- chr6:15593081:- FRAMESHIFT NA TCGA-55-8507-01A-11R-2403-07 ZBTB40-VPS13D 1 6 chr1:22522463:+ chr1:12234191:+ . NA TCGA-55-8507-01A-11R-2403-07 STK38L-TMPRSS12 1 2 chr12:27319423:+ chr12:50843842:+ FRAMESHIFT NA TCGA-55-8508-01A-11R-2403-07 PITPNC1-IGHJ5 9 0 chr17:67552340:+ chr14:105863854:- INFRAME NA TCGA-55-8508-01A-11R-2403-07 MTUS1-FGL1 3 22 chr8:17713214:- chr8:17885571:- . NA TCGA-55-8510-01A-11R-2403-07 HIPK3-CAT 2 7 chr11:33352265:+ chr11:34449192:+ INFRAME NA TCGA-55-8510-01A-11R-2403-07 SCYL1-FRMD8 1 10 chr11:65532805:+ chr11:65411242:+ FRAMESHIFT NA TCGA-55-8510-01A-11R-2403-07 SLC12A7-ZDHHC11B 1 10 chr5:1073633:- chr5:745298:- FRAMESHIFT NA TCGA-55-8511-01A-11R-2403-07 B4GALT3-BCAS3 16 93 chr1:161177423:- chr17:61084467:+ . NA TCGA-55-8511-01A-11R-2403-07 HNF4G-TPD52 3 6 chr8:75407964:+ chr8:80064593:- . NA TCGA-55-8511-01A-11R-2403-07 TRAPPC8-GREB1L 1 4 chr18:31890735:- chr18:21434947:+ FRAMESHIFT NA TCGA-55-8513-01A-11R-2403-07 ALG11-ZFYVE28 2 1 chr13:52012462:+ chr4:2274216:- INFRAME NA TCGA-55-8614-01A-11R-2403-07 CPNE1-ZNF618 1 7 chr20:35664802:- chr9:113969117:+ . NA TCGA-55-8614-01A-11R-2403-07 RBM12-ZNF618 1 7 chr20:35664802:- chr9:113969117:+ . NA TCGA-55-8614-01A-11R-2403-07 TEAD1-ARNTL 1 6 chr11:12675561:+ chr11:13365500:+ . NA TCGA-55-8615-01A-11R-2403-07 TCF7L1-BRMS1L 17 64 chr2:85307914:+ chr14:35871516:+ . NA TCGA-55-8615-01A-11R-2403-07 MCEE-ANXA4 6 29 chr2:71129717:- chr2:69781520:+ . NA TCGA-55-8615-01A-11R-2403-07 YPEL2-HEATR6 3 19 chr17:59389468:+ chr17:60067732:- INFRAME NA TCGA-55-8615-01A-11R-2403-07 RAB1B-MTMR2 4 8 chr11:66268693:+ chr11:95865676:- FRAMESHIFT NA TCGA-55-8615-01A-11R-2403-07 TNS3-ELMO1 1 10 chr7:47411727:- chr7:36895017:- INFRAME NA TCGA-55-8615-01A-11R-2403-07 FIP1L1-SORCS1 1 5 chr4:53399839:+ chr10:106730114:- INFRAME NA TCGA-55-8620-01A-11R-2403-07 MED25-SIGLEC12 26 56 chr19:49819296:+ chr19:51491829:- FRAMESHIFT NA TCGA-55-8620-01A-11R-2403-07 TMCO3-ST7 4 11 chr13:113491273:+ chr7:117099762:+ . NA TCGA-55-8620-01A-11R-2403-07 RAPGEF1-MED27 4 6 chr9:131739770:- chr9:131893992:- FRAMESHIFT NA TCGA-55-8620-01A-11R-2403-07 DDC-KIAA0040 1 11 chr7:50503993:- chr1:175166737:- . NA TCGA-55-8620-01A-11R-2403-07 TMEM132D-RALGAPA2 2 6 chr12:129531059:- chr20:20412148:- INFRAME NA TCGA-55-8620-01A-11R-2403-07 RPS6KC1-SDCCAG8 2 4 chr1:213071041:+ chr1:243330540:+ INFRAME NA TCGA-55-8620-01A-11R-2403-07 FARS2-AKR1E2 1 6 chr6:5261660:+ chr10:4830675:+ . NA TCGA-55-8620-01A-11R-2403-07 ADPRHL1-TFDP1 1000 1000 chr13:113407956:- chr13:113585774:+ . NA TCGA-55-8620-01A-11R-2403-07 PCID2-TMCO3 1000 1000 chr13:113190872:- chr13:113547300:+ FRAMESHIFT NA TCGA-55-A48Y-01A-11R-A24H-07 ATAD1-RNLS 13 40 chr10:87814438:- chr10:88362725:- FRAMESHIFT NA TCGA-55-A48Y-01A-11R-A24H-07 SETD2-QRICH1 13 34 chr3:47163854:- chr3:49033228:- FRAMESHIFT Likely Oncogenic NA TCGA-55-A48Y-01A-11R-A24H-07 PLPP1-ANKRD55 12 24 chr5:55441851:- chr5:56127106:- INFRAME NA TCGA-55-A48Y-01A-11R-A24H-07 PTGR1-C9orf84 7 38 chr9:111592926:- chr9:111694362:- FRAMESHIFT NA TCGA-55-A48Y-01A-11R-A24H-07 ZDHHC7-C16orf74 7 37 chr16:84977095:- chr16:85710285:- FRAMESHIFT NA TCGA-55-A48Y-01A-11R-A24H-07 SLC16A3-AKAP10 3 8 chr17:82229106:+ chr17:19924517:- . NA TCGA-55-A48Y-01A-11R-A24H-07 ENTPD5-ALDH6A1 2 7 chr14:73970010:- chr14:74075017:- INFRAME NA TCGA-55-A48Y-01A-11R-A24H-07 ETHE1-ZNF235 2 4 chr19:43526201:- chr19:44236729:- FRAMESHIFT NA TCGA-55-A48Y-01A-11R-A24H-07 EML2-DMWD 1 5 chr19:45617630:- chr19:45786871:- FRAMESHIFT NA TCGA-55-A48Z-01A-12R-A24X-07 STIM2-SPIDR 2 7 chr4:27017984:+ chr8:47279862:+ FRAMESHIFT NA TCGA-55-A490-01A-11R-A466-07 PIK3AP1-NDRG1 2 2 chr10:96709567:- chr8:133284329:- FRAMESHIFT NA TCGA-55-A490-01A-11R-A466-07 WARS2-DLG2 1 4 chr1:119140555:- chr11:85154651:- INFRAME NA TCGA-55-A491-01A-11R-A24H-07 PARVA-MICALCL 2 13 chr11:12377783:+ chr11:12319696:+ INFRAME NA TCGA-55-A491-01A-11R-A24H-07 SBF2-PDE3B 1 9 chr11:10028452:- chr11:14771937:+ FRAMESHIFT NA TCGA-55-A492-01A-11R-A24H-07 SPINT2-MAP4K1 48 190 chr19:38290575:+ chr19:38597137:- INFRAME NA TCGA-55-A492-01A-11R-A24H-07 SFTPB-TPT1 1 7 chr2:85661454:- chr13:45337388:- . NA TCGA-55-A492-01A-11R-A24H-07 CAPN5-PELI3 1 3 chr11:77093813:+ chr11:66472369:+ INFRAME NA TCGA-55-A493-01A-11R-A24H-07 TMC5-HN1 30 108 chr16:19430640:+ chr17:75148671:- . NA TCGA-55-A493-01A-11R-A24H-07 UBE2G2-GART 7 49 chr21:44777299:- chr21:33525000:- INFRAME NA TCGA-55-A493-01A-11R-A24H-07 TUBB2A-SLC22A23 5 17 chr6:3155625:- chr6:3324002:- INFRAME NA TCGA-55-A493-01A-11R-A24H-07 PLXNA3-TKTL1 2 12 chrX:154470611:+ chrX:154305304:+ INFRAME NA TCGA-55-A493-01A-11R-A24H-07 WWTR1-ANKUB1 2 6 chr3:149656876:- chr3:149761613:- INFRAME NA TCGA-55-A493-01A-11R-A24H-07 NECTIN2-IGSF23 1 8 chr19:44846613:+ chr19:44623707:+ FRAMESHIFT NA TCGA-55-A493-01A-11R-A24H-07 KIF21A-SLC2A13 2 3 chr12:39442927:- chr12:39871961:- INFRAME NA TCGA-55-A493-01A-11R-A24H-07 PARP14-TASP1 1 5 chr3:122701635:+ chr20:13559114:- FRAMESHIFT NA TCGA-55-A493-01A-11R-A24H-07 B4GALNT3-LMO3 1 4 chr12:460545:+ chr12:16600868:- INFRAME NA TCGA-55-A493-01A-11R-A24H-07 LAMA3-C18orf8 1 1 chr18:23714072:+ chr18:23529179:+ INFRAME NA TCGA-55-A494-01A-11R-A24X-07 MTUS2-PIBF1 1 16 chr13:28839850:+ chr13:72893784:+ . NA TCGA-55-A4DF-01A-11R-A24H-07 ITGB4-TSPAN10 3 3 chr17:75751111:+ chr17:81644992:+ FRAMESHIFT NA TCGA-55-A4DG-01A-11R-A24H-07 SPOP-LIMA1 6 28 chr17:49618981:- chr12:50222485:- INFRAME Likely Oncogenic NA TCGA-55-A4DG-01A-11R-A24H-07 THUMPD2-VSNL1 3 14 chr2:39779114:- chr2:17649410:+ INFRAME NA TCGA-55-A4DG-01A-11R-A24H-07 ARHGAP5-AKAP6 1 6 chr14:32094386:+ chr14:32535554:+ INFRAME NA TCGA-55-A57B-01A-12R-A39D-07 NR1D2-UBE2E2 4 7 chr3:23962605:+ chr3:23532554:+ INFRAME NA TCGA-62-8394-01A-11R-2326-07 CELSR1-CD52 81 308 chr22:46463707:- chr1:26320171:+ FRAMESHIFT NA TCGA-62-8394-01A-11R-2326-07 FAM83G-TRIM16 1 12 chr17:18988247:- chr17:15642816:- INFRAME NA TCGA-62-8394-01A-11R-2326-07 NKAIN1-PFAS 1 2 chr1:31239494:- chr17:8254166:+ FRAMESHIFT NA TCGA-62-8395-01A-11R-2326-07 MBNL1-SGSM3 11 28 chr3:152432920:+ chr22:40400696:+ . NA TCGA-62-8395-01A-11R-2326-07 ARHGAP45-STK11 6 14 chr19:1066163:+ chr19:1218417:+ FRAMESHIFT Likely Oncogenic NA TCGA-62-8395-01A-11R-2326-07 YWHAE-RTN4RL1 4 21 chr17:1400047:- chr17:1937808:- INFRAME NA TCGA-62-8395-01A-11R-2326-07 STK11-SRFBP1 5 5 chr19:1207203:+ chr5:122019260:+ FRAMESHIFT Likely Oncogenic NA TCGA-62-8395-01A-11R-2326-07 PGC-UBB 3 5 chr6:41740575:- chr17:16381114:+ . NA TCGA-62-8395-01A-11R-2326-07 SGSM3-C22orf46 1 3 chr22:40370688:+ chr22:41690784:+ . NA TCGA-62-A46O-01A-11R-A24H-07 YAP1-C11orf70 9 17 chr11:102114394:+ chr11:102081215:+ INFRAME Likely Oncogenic NA TCGA-62-A46O-01A-11R-A24H-07 ETV6-PLEKHG6 6 17 chr12:11650160:+ chr12:6315005:+ INFRAME Likely Oncogenic NA TCGA-62-A46O-01A-11R-A24H-07 TMEM69-MAST2 1 13 chr1:45688275:+ chr1:45824433:+ . NA TCGA-62-A46O-01A-11R-A24H-07 RBP7-NMNAT1 1 4 chr1:10007748:+ chr1:9972018:+ . NA TCGA-62-A46O-01A-11R-A24H-07 ELMO3-C16orf70 1 1 chr16:67200361:+ chr16:67139984:+ FRAMESHIFT NA TCGA-62-A46P-01A-11R-A24H-07 SFTPB-WDR13 1 3 chr2:85665289:- chrX:48601784:+ INFRAME NA TCGA-62-A46S-01A-11R-A24H-07 SSR1-FARS2 110 635 chr6:7303550:- chr6:5545180:+ INFRAME NA TCGA-62-A46S-01A-11R-A24H-07 TMEM64-HHLA1 15 18 chr8:90645111:- chr8:132065968:- FRAMESHIFT NA TCGA-62-A46S-01A-11R-A24H-07 NUMA1-DHCR7 12 27 chr11:72006035:- chr11:71439083:- FRAMESHIFT NA TCGA-62-A46S-01A-11R-A24H-07 TMEM64-OC90 2 30 chr8:90645111:- chr8:132045883:- FRAMESHIFT NA TCGA-62-A46U-01A-11R-A24H-07 GATAD2B-DCAF8 4 151 chr1:153922733:- chr1:160240370:- . NA TCGA-62-A46U-01A-11R-A24H-07 EFTUD2-C1QL1 7 22 chr17:44867807:- chr17:44960367:- INFRAME NA TCGA-62-A46U-01A-11R-A24H-07 MTMR3-SCNN1B 3 18 chr22:29971062:+ chr16:23348592:+ FRAMESHIFT NA TCGA-62-A46U-01A-11R-A24H-07 ARMC7-NUP85 2 8 chr17:75110606:+ chr17:75225103:+ INFRAME NA TCGA-62-A46U-01A-11R-A24H-07 MSI2-NPEPPS 2 6 chr17:57258354:+ chr17:47590717:+ INFRAME NA TCGA-62-A46V-01A-11R-A24H-07 MARVELD2-WDR19 10 35 chr5:69420531:+ chr4:39285487:+ . NA TCGA-62-A46V-01A-11R-A24H-07 NECTIN2-ZMAT2 3 5 chr19:44874478:+ chr5:140703918:+ FRAMESHIFT NA TCGA-62-A471-01A-12R-A24H-07 PTMA-SAP30BP 1 9 chr2:231711419:+ chr17:75690671:+ INFRAME NA TCGA-62-A471-01A-12R-A24H-07 SPAG5-SYTL1 1 1 chr17:28584150:- chr1:27353713:+ FRAMESHIFT NA TCGA-64-1676-01A-01R-0946-07 C2orf42-BCL11A 3 41 chr2:70248405:- chr2:60516518:- . NA TCGA-64-1676-01A-01R-0946-07 TIA1-BCL11A 3 41 chr2:70248405:- chr2:60516518:- . NA TCGA-64-1679-01A-21R-2066-07 ZNF253-BAZ1A 2 14 chr19:19865999:+ chr14:34811036:- FRAMESHIFT NA TCGA-64-1679-01A-21R-2066-07 UPF2-NUDT5 3 5 chr10:12042755:- chr10:12172866:- . NA TCGA-64-1679-01A-21R-2066-07 SLC2A1-ELOVL1 2 7 chr1:42958634:- chr1:43364794:- INFRAME NA TCGA-64-1679-01A-21R-2066-07 GPRIN2-NPY4R 1000 1000 chr10:46550438:- chr10:46465721:- . NA TCGA-64-1679-01A-21R-2066-07 C2CD3-COA4 1000 1000 chr11:74090813:- chr11:73873394:- INFRAME NA TCGA-64-1680-01A-02R-0946-07 FBXO9-CD74 22 110 chr6:53095664:+ chr5:150402625:- FRAMESHIFT NA TCGA-64-1680-01A-02R-0946-07 APOPT1-MARK3 1 3 chr14:103563124:+ chr14:103502882:+ FRAMESHIFT NA TCGA-64-1681-01A-11R-2066-07 SGMS1-GAB2 1 8 chr10:50327205:- chr11:78280901:- INFRAME NA TCGA-64-5774-01A-01R-1628-07 FRYL-OCIAD2 22 96 chr4:48710519:- chr4:48894053:- . NA TCGA-64-5774-01A-01R-1628-07 IGHG1-BPIFA1 3 18 chr14:105741673:- chr20:33236003:+ . NA TCGA-64-5774-01A-01R-1628-07 MAST4-GTF2H2B 1 5 chr5:67090231:+ chr5:70441416:+ . NA TCGA-64-5775-01A-01R-1628-07 TSFM-MARCH9 9 38 chr12:57787162:+ chr12:57758108:+ INFRAME NA TCGA-64-5775-01A-01R-1628-07 ROR1-DNAJC6 3 8 chr1:64177989:+ chr1:65364635:+ INFRAME NA TCGA-64-5778-01A-01R-1628-07 PDXDC1-NPIPA3 1 15 chr16:15030056:+ chr16:14724318:+ FRAMESHIFT NA TCGA-64-5779-01A-01R-1628-07 FAM60A-CD27 1 81 chr12:31326024:- chr12:6445424:+ . NA TCGA-64-5779-01A-01R-1628-07 SLK-ZFHX3 1 2 chr10:103967895:+ chr16:72960194:- . NA TCGA-67-3771-01A-01R-0946-07 RPLP2-TALDO1 14 59 chr11:811645:+ chr11:755879:+ INFRAME NA TCGA-67-3771-01A-01R-0946-07 CLIC2-VPS39 10 68 chrX:155334371:- chr15:42178338:- FRAMESHIFT NA TCGA-67-3771-01A-01R-0946-07 DYRK1A-TTC3 2 20 chr21:37420384:+ chr21:37188495:+ FRAMESHIFT NA TCGA-67-3771-01A-01R-0946-07 ARMC9-EVL 1 4 chr2:231296253:+ chr14:100084687:+ FRAMESHIFT NA TCGA-67-3771-01A-01R-0946-07 GRHL2-BAALC 1 3 chr8:101492789:+ chr8:103212919:+ FRAMESHIFT NA TCGA-67-3772-01A-01R-0946-07 OSBPL9-FGGY 1 2 chr1:51669512:+ chr1:59625988:+ FRAMESHIFT NA TCGA-67-3773-01A-01R-0946-07 FGF13-DACH2 3 13 chrX:139204059:- chrX:86812856:+ INFRAME NA TCGA-67-3773-01A-01R-0946-07 MGA-PBX4 1 9 chr15:41669958:+ chr19:19570833:- FRAMESHIFT Likely Oncogenic NA TCGA-67-3774-01A-01R-0946-07 MARK2-DLAT 3 42 chr11:63839560:+ chr11:112037273:+ FRAMESHIFT NA TCGA-67-3774-01A-01R-0946-07 MRPS22-SLC9A9 6 8 chr3:139352792:+ chr3:143693307:- INFRAME NA TCGA-67-3774-01A-01R-0946-07 R3HDM2-MYRFL 7 2 chr12:57430720:- chr12:69909969:+ . NA TCGA-67-3774-01A-01R-0946-07 BAZ2A-ACVR1B 1 23 chr12:56636182:- chr12:51975265:+ INFRAME NA TCGA-67-3774-01A-01R-0946-07 PDE3A-CCT2 6 3 chr12:20370244:+ chr12:69592059:+ FRAMESHIFT NA TCGA-67-3774-01A-01R-0946-07 CMC1-GLB1 2 17 chr3:28241812:+ chr3:33077237:- FRAMESHIFT NA TCGA-67-3774-01A-01R-0946-07 TOP2B-GADL1 2 4 chr3:25604760:- chr3:30844466:- FRAMESHIFT NA TCGA-67-4679-01B-01R-1755-07 SFTPB-SRRM2 1 6 chr2:85661454:- chr16:2770352:+ . NA TCGA-67-6215-01A-11R-1755-07 ACSF3-MYH7B 1 9 chr16:89146049:+ chr20:34990738:+ INFRAME NA TCGA-67-6217-01A-11R-1755-07 PTBP1-AP3D1 45 367 chr19:807902:+ chr19:2101400:- . NA TCGA-67-6217-01A-11R-1755-07 TNKS-FAM86B3P 5 18 chr8:9580383:+ chr8:8244099:+ . NA TCGA-67-6217-01A-11R-1755-07 SEL1L-SERTAD2 1 13 chr14:81526733:- chr2:64636875:- . NA TCGA-67-6217-01A-11R-1755-07 BPTF-BCAS3 2 8 chr17:67940656:+ chr17:61368327:+ FRAMESHIFT NA TCGA-67-6217-01A-11R-1755-07 WBP1L-TRIM8 2 8 chr10:102744143:+ chr10:102654653:+ INFRAME NA TCGA-67-6217-01A-11R-1755-07 CDC37-KMT2C 2 3 chr19:10403378:- chr7:152139791:- INFRAME Likely Oncogenic NA TCGA-67-6217-01A-11R-1755-07 TRAPPC6B-MIA2 1 5 chr14:39170015:- chr14:39234015:+ . NA TCGA-67-6217-01A-11R-1755-07 AP3D1-MUM1 1 3 chr19:2108687:- chr19:1356324:+ . NA TCGA-69-7760-01A-11R-2170-07 G2E3-NAP1L1 4 65 chr14:30581116:+ chr12:76049785:- FRAMESHIFT NA TCGA-69-7760-01A-11R-2170-07 CAMK2B-SPIDR 3 35 chr7:44325357:- chr8:47396376:+ FRAMESHIFT NA TCGA-69-7760-01A-11R-2170-07 FNTA-SPIDR 5 14 chr8:43077364:+ chr8:47279862:+ FRAMESHIFT NA TCGA-69-7760-01A-11R-2170-07 SPIDR-FNTA 1 6 chr8:47440542:+ chr8:43083118:+ INFRAME NA TCGA-69-7761-01A-11R-2170-07 CPD-ORMDL3 7 47 chr17:30385236:+ chr17:39924220:- . NA TCGA-69-7761-01A-11R-2170-07 LRRC7-IGKJ4 17 0 chr1:70039578:+ chr2:88860921:- INFRAME NA TCGA-69-7761-01A-11R-2170-07 XPNPEP3-RTCB 3 34 chr22:40886515:+ chr22:32388099:- INFRAME NA TCGA-69-7761-01A-11R-2170-07 ZNF197-TAF3 1 16 chr3:44632599:+ chr10:7963920:+ INFRAME NA TCGA-69-7761-01A-11R-2170-07 CPD-GSDMB 1 5 chr17:30385236:+ chr17:39917321:- . NA TCGA-69-7763-01A-11R-2170-07 FAF1-DCAF6 4 7 chr1:50535369:- chr1:168065590:+ INFRAME NA TCGA-69-7763-01A-11R-2170-07 POGZ-C1orf21 4 3 chr1:151427823:- chr1:184477386:+ . NA TCGA-69-7764-01A-11R-2170-07 SUPT5H-NADSYN1 5 19 chr19:39459960:+ chr11:71463432:+ FRAMESHIFT NA TCGA-69-7973-01A-11R-2187-07 MED26-HSH2D 15 30 chr19:16627872:- chr19:16152552:+ FRAMESHIFT NA TCGA-69-7974-01A-11R-2187-07 SDHA-CTNND2 3 9 chr5:240476:+ chr5:11236823:- FRAMESHIFT NA TCGA-69-7978-01A-11R-2187-07 PDLIM1-SORBS1 11 49 chr10:95271633:- chr10:95322021:- FRAMESHIFT NA TCGA-69-7978-01A-11R-2187-07 TUBD1-RPS6KB1 19 6 chr17:59892697:- chr17:59910562:+ . NA TCGA-69-7978-01A-11R-2187-07 ATOH8-GNLY 4 8 chr2:85764182:+ chr2:85695320:+ FRAMESHIFT NA TCGA-69-7978-01A-11R-2187-07 SIRT1-CELF2 2 6 chr10:67891554:+ chr10:11257738:+ FRAMESHIFT NA TCGA-69-7978-01A-11R-2187-07 SEPT7-GLI3 2 5 chr7:35832900:+ chr7:42076857:- INFRAME NA TCGA-69-7978-01A-11R-2187-07 ZNF91-NR1H2 1 4 chr19:23358430:- chr19:50352491:+ . NA TCGA-69-7979-01A-11R-2187-07 TMCO3-MCF2L 50 3071 chr13:113498505:+ chr13:112909910:+ . NA TCGA-69-7979-01A-11R-2187-07 ACSL3-PHGDH 74 88 chr2:222861258:+ chr1:119721170:+ . NA TCGA-69-7979-01A-11R-2187-07 DOCK9-SPACA7 21 165 chr13:98880547:- chr13:112432444:+ FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 ZNF638-C2orf74 20 29 chr2:71418639:+ chr2:61162842:+ INFRAME NA TCGA-69-7979-01A-11R-2187-07 ABCC4-COL4A2 7 55 chr13:95170532:- chr13:110424734:+ INFRAME NA TCGA-69-7979-01A-11R-2187-07 GRTP1-COL4A2 3 49 chr13:113344863:- chr13:110501668:+ INFRAME NA TCGA-69-7979-01A-11R-2187-07 LMO7-ITGBL1 2 53 chr13:75838196:+ chr13:101567699:+ INFRAME NA TCGA-69-7979-01A-11R-2187-07 FARP1-UCHL3 9 24 chr13:98143492:+ chr13:75560753:+ . NA TCGA-69-7979-01A-11R-2187-07 SRD5A1-WASIR2 11 11 chr5:6633869:+ chr16:22958:+ . NA TCGA-69-7979-01A-11R-2187-07 S1PR2-RAVER1 9 16 chr19:10231204:- chr19:10319240:- . NA TCGA-69-7979-01A-11R-2187-07 C11orf49-F2 7 11 chr11:46987310:+ chr11:46725859:+ FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 YAP1-C11orf70 7 9 chr11:102114394:+ chr11:102047815:+ INFRAME Likely Oncogenic NA TCGA-69-7979-01A-11R-2187-07 GORASP2-ERICH2 5 12 chr2:170929403:+ chr2:170792863:+ INFRAME NA TCGA-69-7979-01A-11R-2187-07 MIOS-GTF2IRD2B 5 8 chr7:7568123:+ chr7:75120891:+ . NA TCGA-69-7979-01A-11R-2187-07 MAN2A2-BLM 2 19 chr15:90903432:+ chr15:90760147:+ . NA TCGA-69-7979-01A-11R-2187-07 CARS2-ATP11A 3 8 chr13:110713137:- chr13:112854279:+ . NA TCGA-69-7979-01A-11R-2187-07 CORO7-ENPP7P14 2 12 chr16:4412356:- chr16:5120823:- . NA TCGA-69-7979-01A-11R-2187-07 EIF3L-VPS13B 3 6 chr22:37855644:+ chr8:99848776:+ FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 FARP1-NALCN 2 9 chr13:98213413:+ chr13:101292366:- FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 MAPK1-ARHGEF7 2 8 chr22:21867322:- chr13:111217679:+ FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 PHF21A-PACSIN3 3 4 chr11:46076754:- chr11:47183069:- . NA TCGA-69-7979-01A-11R-2187-07 MKL1-NTNG1 2 7 chr22:40636478:- chr1:107395154:+ . NA TCGA-69-7979-01A-11R-2187-07 STAG2-C16orf45 1 8 chrX:124086770:+ chr16:15515305:+ INFRAME Likely Oncogenic NA TCGA-69-7979-01A-11R-2187-07 ZNF721-RFPL3S 2 4 chr4:435770:- chr22:32368567:- . NA TCGA-69-7979-01A-11R-2187-07 ANAPC2-EXD3 1 7 chr9:137180181:- chr9:137307646:- FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 PPP1R12B-LRRN2 1 4 chr1:202349142:+ chr1:204620218:- . NA TCGA-69-7979-01A-11R-2187-07 PSMB7-GOLGA1 1 4 chr9:124384598:- chr9:124881257:- INFRAME NA TCGA-69-7979-01A-11R-2187-07 KIAA1958-HSDL2 1 3 chr9:112487118:+ chr9:112454013:+ . NA TCGA-69-7979-01A-11R-2187-07 RAB25-ASH1L 1 2 chr1:156061443:+ chr1:155482449:- FRAMESHIFT NA TCGA-69-7979-01A-11R-2187-07 ATP11A-MCF2L 1000 1000 chr13:112862571:+ chr13:112902195:+ . NA TCGA-69-7980-01A-11R-2187-07 ALDH5A1-MAP3K5 4 12 chr6:24504985:+ chr6:136558876:- INFRAME NA TCGA-69-7980-01A-11R-2187-07 SHROOM4-CXorf36 5 8 chrX:50813902:- chrX:45151992:- FRAMESHIFT NA TCGA-69-7980-01A-11R-2187-07 ZNF66-MLLT3 2 15 chr19:20793878:+ chr9:20448266:- FRAMESHIFT NA TCGA-69-7980-01A-11R-2187-07 RNF216-JAZF1 4 6 chr7:5641154:- chr7:27991981:- FRAMESHIFT NA TCGA-69-7980-01A-11R-2187-07 TARBP1-BTBD7 2 8 chr1:234393362:- chr14:93296157:- . NA TCGA-69-8253-01A-11R-2287-07 SFTPB-MUC1 1 21 chr2:85665289:- chr1:155188231:- INFRAME NA TCGA-69-8254-01A-11R-2287-07 RNF139-EIF2A 4 36 chr8:124475290:+ chr3:150552356:+ INFRAME NA TCGA-69-8255-01A-11R-2287-07 SCARB2-AREG 10 26 chr4:76213427:- chr4:74446534:+ FRAMESHIFT NA TCGA-69-8255-01A-11R-2287-07 TRAPPC9-C2CD5 6 15 chr8:140397620:- chr12:22527892:- INFRAME NA TCGA-69-8255-01A-11R-2287-07 CREBBP-TP53TG3 5 11 chr16:3850297:- chr16:32674564:- FRAMESHIFT Likely Oncogenic NA TCGA-69-8255-01A-11R-2287-07 COL26A1-BET1 3 14 chr7:101363190:+ chr7:93994385:- FRAMESHIFT NA TCGA-69-8255-01A-11R-2287-07 NUP54-CXCL9 2 14 chr4:76124649:- chr4:76006274:- FRAMESHIFT NA TCGA-69-8255-01A-11R-2287-07 IKBKB-GOT1L1 3 8 chr8:42293512:+ chr8:37938881:- INFRAME NA TCGA-69-8255-01A-11R-2287-07 KAT6A-RAB11FIP1 1 13 chr8:42048378:- chr8:37877551:- FRAMESHIFT NA TCGA-69-A59K-01A-11R-A262-07 SPOP-GPATCH1 12 65 chr17:49677933:- chr19:33119010:+ . Likely Oncogenic NA TCGA-69-A59K-01A-11R-A262-07 TNRC6A-ANKS4B 3 39 chr16:24791034:+ chr16:21251608:+ . NA TCGA-69-A59K-01A-11R-A262-07 NFKBID-ZNF585B 5 29 chr19:35898472:- chr19:37207254:- . NA TCGA-69-A59K-01A-11R-A262-07 PEPD-SKAP1 3 32 chr19:33462995:- chr17:48137337:- FRAMESHIFT NA TCGA-69-A59K-01A-11R-A262-07 ZNF720-POLN 2 14 chr16:31753900:+ chr4:2131290:- FRAMESHIFT NA TCGA-69-A59K-01A-11R-A262-07 AKAP6-SPTSSA 2 4 chr14:32433817:+ chr14:34435304:- FRAMESHIFT NA TCGA-69-A59K-01A-11R-A262-07 FAM102A-PTGES2 1 7 chr9:127953575:- chr9:128125441:- INFRAME NA TCGA-69-A59K-01A-11R-A262-07 ZNF585A-CACNA1G 1 7 chr19:37169839:- chr17:50575543:+ INFRAME NA TCGA-71-6725-01A-11R-1858-07 KDM6A-DCAF7 5 22 chrX:44873987:+ chr17:63578470:+ INFRAME Likely Oncogenic NA TCGA-71-6725-01A-11R-1858-07 KDM6A-ZNF674 5 21 chrX:44873987:+ chrX:46501335:- FRAMESHIFT Likely Oncogenic NA TCGA-73-4658-01A-01R-1755-07 SIK3-CD3D 3 5 chr11:117098143:- chr11:118339494:- FRAMESHIFT NA TCGA-73-4658-01A-01R-1755-07 LMO7-MED4 1 4 chr13:75823873:+ chr13:48090418:- FRAMESHIFT NA TCGA-73-4659-01A-01R-1206-07 XPO7-ETV4 2 7 chr8:21980203:+ chr17:43536479:- FRAMESHIFT NA TCGA-73-4659-01A-01R-1206-07 ATP6V1H-TCEA1 1 2 chr8:53829444:- chr8:54010492:- INFRAME NA TCGA-73-4662-01A-01R-1206-07 TOP1-ADGRL3 5 16 chr20:41097341:+ chr4:61892656:+ FRAMESHIFT Likely Oncogenic NA TCGA-73-4662-01A-01R-1206-07 SHROOM2-BHLHE41 4 14 chrX:9786710:+ chr12:26124582:- FRAMESHIFT NA TCGA-73-4668-01A-01R-1206-07 ZNF664-NAP1L1 7 30 chr12:123988138:+ chr12:76060279:- . NA TCGA-73-4668-01A-01R-1206-07 NMD3-LRRC77P 2 10 chr3:161222057:+ chr3:167888860:+ . NA TCGA-73-4668-01A-01R-1206-07 P2RX4-ZNF664 1 9 chr12:121210298:+ chr12:124011381:+ . NA TCGA-73-4668-01A-01R-1206-07 JMJD1C-TMEM178B 1 5 chr10:63521738:- chr7:141212591:+ . NA TCGA-73-4670-01A-01R-1206-07 EDC3-FAM86C2P 2 11 chr15:74671455:- chr11:67799475:- . NA TCGA-73-4676-01A-01R-1755-07 PPP3R1-SPATS2L 6 23 chr2:68217092:- chr2:200440649:+ INFRAME NA TCGA-73-4676-01A-01R-1755-07 GATM-SLC30A4 1 6 chr15:45401899:- chr15:45490881:- . NA TCGA-73-4677-01A-01R-1206-07 CD2AP-OPN5 5 16 chr6:47544706:+ chr6:47811674:+ FRAMESHIFT NA TCGA-73-7499-01A-11R-2187-07 C11orf80-RBM14 4 7 chr11:66828364:+ chr11:66624214:+ INFRAME NA TCGA-73-A9RS-01A-11R-A41B-07 ZNF763-CXorf58 2 2 chr19:11965211:+ chrX:23910283:+ . NA TCGA-75-5122-01A-01R-1755-07 SRD5A1-ADAMTS16 2 7 chr5:6633869:+ chr5:5303572:+ FRAMESHIFT NA TCGA-75-5122-01A-01R-1755-07 KRAS-SLC2A14 1 6 chr12:25245274:- chr12:7832814:- INFRAME NA TCGA-75-5122-01A-01R-1755-07 N4BP2L2-SUCLA2 2 2 chr13:32436361:- chr13:47943445:- . NA TCGA-75-5122-01A-01R-1755-07 YEATS4-STK38L 1 4 chr12:69362907:+ chr12:27297710:+ . NA TCGA-75-5122-01A-01R-1755-07 GNS-CYP27B1 1 2 chr12:64720022:- chr12:57763255:- FRAMESHIFT NA TCGA-75-5125-01A-01R-1755-07 HNRNPM-SLC25A23 16 183 chr19:8445111:+ chr19:6438534:- FRAMESHIFT NA TCGA-75-5125-01A-01R-1755-07 NCLN-ACSBG2 10 19 chr19:3193428:+ chr19:6187283:+ INFRAME NA TCGA-75-5126-01A-01R-1755-07 ZNF207-RHOT1 1 3 chr17:32362984:+ chr17:32253085:+ FRAMESHIFT NA TCGA-75-5146-01A-01R-1628-07 NCOA3-SGK2 15 70 chr20:47583261:+ chr20:43566473:+ . NA TCGA-75-5147-01A-01R-1628-07 RAI14-ASB4 33 106 chr5:34686955:+ chr7:95527813:+ FRAMESHIFT NA TCGA-75-5147-01A-01R-1628-07 SERGEF-ANKRD29 16 98 chr11:17959470:- chr18:23649193:- INFRAME NA TCGA-75-5147-01A-01R-1628-07 ECE1-NIPAL3 5 14 chr1:21345376:- chr1:24440172:+ INFRAME NA TCGA-75-5147-01A-01R-1628-07 SWAP70-ZNF143 1 17 chr11:9664278:+ chr11:9501091:+ FRAMESHIFT NA TCGA-75-6205-01A-11R-1755-07 LRRN4-MCM8 3 8 chr20:6050779:- chr20:5993506:+ INFRAME NA TCGA-75-6206-01A-11R-1755-07 TLN1-SFTPB 1 3 chr9:35703560:- chr2:85659682:- . NA TCGA-75-6207-01A-11R-1755-07 RIC1-AARD 56 98 chr9:5690038:+ chr8:116942558:+ FRAMESHIFT NA TCGA-75-6207-01A-11R-1755-07 TRIO-UHRF2 11 16 chr5:14143882:+ chr9:6420912:+ FRAMESHIFT NA TCGA-75-6207-01A-11R-1755-07 SLC12A7-TMEM232 5 8 chr5:1057471:- chr5:110332925:- . NA TCGA-75-6207-01A-11R-1755-07 KCTD18-SNED1 3 7 chr2:200497753:- chr2:241067764:+ INFRAME NA TCGA-75-6207-01A-11R-1755-07 MIR548XHG-EXOC5 3 4 chr21:18737924:- chr14:57247712:- . NA TCGA-75-6207-01A-11R-1755-07 UBE2R2-TMEM8B 1 5 chr9:33817934:+ chr9:35841134:+ . NA TCGA-75-6211-01A-11R-1755-07 OSBPL2-DLGAP4 21 19 chr20:62238597:+ chr20:36524250:+ . NA TCGA-75-6211-01A-11R-1755-07 SNX27-TARS2 8 14 chr1:151683445:+ chr1:150504335:+ INFRAME NA TCGA-75-6211-01A-11R-1755-07 FAM118B-ST3GAL4 4 11 chr11:126241044:+ chr11:126406096:+ INFRAME NA TCGA-75-6211-01A-11R-1755-07 CSRNP2-GLS2 4 7 chr12:51083339:- chr12:56480387:- . NA TCGA-75-6211-01A-11R-1755-07 NFIB-ZDHHC21 3 10 chr9:14306989:- chr9:14662326:- INFRAME NA TCGA-75-6211-01A-11R-1755-07 SFXN5-TMEM150A 1 6 chr2:73070460:- chr2:85602064:- . NA TCGA-75-6211-01A-11R-1755-07 OLA1-PDE11A 1 2 chr2:174223033:- chr2:177728172:- FRAMESHIFT NA TCGA-75-6211-01A-11R-1755-07 CHD6-P2RY8 1 1 chr20:41618340:- chrY:1466582:- . NA TCGA-75-6214-01A-41R-1949-07 LAMA3-ZNF521 82 270 chr18:23949924:+ chr18:25227697:- INFRAME NA TCGA-75-6214-01A-41R-1949-07 B4GALT5-TOX2 16 14 chr20:49713576:- chr20:43973367:+ FRAMESHIFT NA TCGA-75-6214-01A-41R-1949-07 SMPD3-MEIOB 1 5 chr16:68448353:- chr16:1862116:- . NA TCGA-75-6214-01A-41R-1949-07 L3MBTL4-LAMA1 1 3 chr18:6414801:- chr18:6962059:- . NA TCGA-75-7025-01A-12R-1949-07 CYP4B1-PLA2G1B 1 29 chr1:46817181:+ chr12:120326020:- INFRAME NA TCGA-75-7027-01A-11R-1949-07 LAP3-GALNS 1 4 chr4:17588977:+ chr16:88826838:- FRAMESHIFT NA TCGA-75-7031-01A-11R-1949-07 TYMP-PPP6R2 5 33 chr22:50529904:- chr22:50372020:+ . NA TCGA-75-7031-01A-11R-1949-07 ODF3B-PPP6R2 5 28 chr22:50529904:- chr22:50372020:+ . NA TCGA-75-7031-01A-11R-1949-07 PRTG-PYGO1 3 20 chr15:55740382:- chr15:55548995:- INFRAME NA TCGA-75-7031-01A-11R-1949-07 TEX9-CYFIP1 2 12 chr15:56373504:+ chr15:22883011:- INFRAME NA TCGA-75-7031-01A-11R-1949-07 LY75-CCDC148 1 15 chr2:159886420:- chr2:158250912:- FRAMESHIFT NA TCGA-75-7031-01A-11R-1949-07 TCF12-NIPA1 4 1 chr15:56921098:+ chr15:22810749:+ INFRAME NA TCGA-78-7145-01A-11R-2039-07 FAM53B-BBIP1 3 18 chr10:124696158:- chr10:110901612:- INFRAME NA TCGA-78-7145-01A-11R-2039-07 YWHAZ-HHLA1 2 9 chr8:100948596:- chr8:132079966:- FRAMESHIFT NA TCGA-78-7145-01A-11R-2039-07 TMEM67-STMN2 1 10 chr8:93803684:+ chr8:79664815:+ INFRAME NA TCGA-78-7145-01A-11R-2039-07 RNF24-CDS2 1 8 chr20:3945177:- chr20:5173523:+ INFRAME NA TCGA-78-7146-01A-11R-2039-07 F11R-NOS1AP 29 220 chr1:161021010:- chr1:162355187:+ INFRAME NA TCGA-78-7146-01A-11R-2039-07 MED13-DDX42 36 150 chr17:62052537:- chr17:63808820:+ FRAMESHIFT NA TCGA-78-7146-01A-11R-2039-07 NARF-USP36 38 116 chr17:82481211:+ chr17:78787658:- . NA TCGA-78-7146-01A-11R-2039-07 HELZ-CACNG4 16 90 chr17:67120405:- chr17:67030466:+ INFRAME NA TCGA-78-7146-01A-11R-2039-07 FBF1-HELZ 5 40 chr17:75937566:- chr17:67138114:- FRAMESHIFT NA TCGA-78-7146-01A-11R-2039-07 ADAR-GPATCH4 1 23 chr1:154601041:- chr1:156599104:- . NA TCGA-78-7146-01A-11R-2039-07 ATF6-GJA5 2 15 chr1:161781999:+ chr1:147759271:- . NA TCGA-78-7146-01A-11R-2039-07 SCN4A-TRIM47 2 14 chr17:63957162:- chr17:75876492:- INFRAME NA TCGA-78-7146-01A-11R-2039-07 ARMC7-CYB561 1 13 chr17:75110606:+ chr17:63437560:- FRAMESHIFT NA TCGA-78-7146-01A-11R-2039-07 TRIM41-ASB9 3 4 chr5:181224812:+ chrX:15258945:- INFRAME NA TCGA-78-7146-01A-11R-2039-07 NOS1AP-F5 2 4 chr1:162343976:+ chr1:169515626:- FRAMESHIFT NA TCGA-78-7146-01A-11R-2039-07 USP9X-GLOD5 1 7 chrX:41086109:+ chrX:48765835:+ . NA TCGA-78-7146-01A-11R-2039-07 SLC38A1-RHEBL1 1 4 chr12:46229153:- chr12:49069106:- FRAMESHIFT NA TCGA-78-7146-01A-11R-2039-07 MFSD11-HELZ 1 2 chr17:76775171:+ chr17:67087081:- FRAMESHIFT NA TCGA-78-7147-01A-11R-2039-07 FNDC3B-KHDRBS3 72 604 chr3:172039771:+ chr8:135606955:+ . NA TCGA-78-7147-01A-11R-2039-07 KPNA1-GMPS 14 189 chr3:122496437:- chr3:155919233:+ INFRAME NA TCGA-78-7147-01A-11R-2039-07 SENP5-TCTEX1D2 23 50 chr3:196868073:+ chr3:196307012:- . NA TCGA-78-7147-01A-11R-2039-07 TSC22D2-SELENOT 9 51 chr3:150411308:+ chr3:150622385:+ . NA TCGA-78-7147-01A-11R-2039-07 FAM83A-LYN 4 5 chr8:123194148:+ chr8:55998346:+ FRAMESHIFT NA TCGA-78-7147-01A-11R-2039-07 RSRC1-MFSD1 2 12 chr3:158203245:+ chr3:158823428:+ FRAMESHIFT NA TCGA-78-7147-01A-11R-2039-07 OSBPL11-CHCHD6 1 10 chr3:125547406:- chr3:126852647:+ FRAMESHIFT NA TCGA-78-7147-01A-11R-2039-07 RB1-XKR5 1 8 chr13:48307406:+ chr8:6815918:- INFRAME Likely Oncogenic NA TCGA-78-7147-01A-11R-2039-07 DHX40-UNC5D 1 3 chr17:59566794:+ chr8:35549292:+ INFRAME NA TCGA-78-7148-01A-11R-2039-07 PPIB-SFTPB 1 23 chr15:64160104:- chr2:85658855:- . NA TCGA-78-7148-01A-11R-2039-07 C11orf24-TRIM53AP 1 9 chr11:68271857:- chr11:89999741:- . NA TCGA-78-7148-01A-11R-2039-07 SFTPB-DMTN 1 5 chr2:85665606:- chr8:22067527:+ INFRAME NA TCGA-78-7148-01A-11R-2039-07 RAB3A-RAD23A 1 3 chr19:18200327:- chr19:12947848:+ FRAMESHIFT NA TCGA-78-7150-01A-21R-2039-07 CDK10-SPATA33 28 82 chr16:89692516:+ chr16:89669286:+ FRAMESHIFT NA TCGA-78-7150-01A-21R-2039-07 UBAP2-APTX 5 75 chr9:34017050:- chr9:32988124:- INFRAME NA TCGA-78-7150-01A-21R-2039-07 TSPAN4-EPS8L2 12 32 chr11:850367:+ chr11:720062:+ INFRAME NA TCGA-78-7150-01A-21R-2039-07 SOCS7-RSF1 6 33 chr17:38377842:+ chr11:77764689:- INFRAME NA TCGA-78-7150-01A-21R-2039-07 OGFOD1-CRNDE 5 15 chr16:56476170:+ chr16:54923650:- . NA TCGA-78-7150-01A-21R-2039-07 ATF1-GRIP1 2 12 chr12:50780238:+ chr12:66596927:- FRAMESHIFT NA TCGA-78-7150-01A-21R-2039-07 KIF21A-TMTC2 2 10 chr12:39442927:- chr12:83030798:+ FRAMESHIFT NA TCGA-78-7150-01A-21R-2039-07 EEF2K-KCTD1 1 2 chr16:22257385:+ chr18:26501250:- FRAMESHIFT NA TCGA-78-7152-01A-11R-2039-07 ADNP-DDX27 25 11 chr20:50930826:- chr20:49221452:+ . NA TCGA-78-7152-01A-11R-2039-07 SRC-SNHG17 7 59 chr20:37344887:+ chr20:38421098:- . NA TCGA-78-7152-01A-11R-2039-07 GABPB2-PRUNE1 2 2 chr1:151070934:+ chr1:151024611:+ . NA TCGA-78-7152-01A-11R-2039-07 UMAD1-C1GALT1 1 4 chr7:7801743:+ chr7:7238255:+ FRAMESHIFT NA TCGA-78-7153-01A-11R-2039-07 SDHB-PLN 11 18 chr1:17053948:- chr6:118558825:+ . NA TCGA-78-7153-01A-11R-2039-07 TRAPPC9-PSKH2 2 48 chr8:140221459:- chr8:86074171:- . NA TCGA-78-7153-01A-11R-2039-07 KIF1B-AGTRAP 5 23 chr1:10297246:+ chr1:11745803:+ INFRAME NA TCGA-78-7153-01A-11R-2039-07 FAM49B-PREX2 4 12 chr8:130016370:- chr8:68191722:+ . NA TCGA-78-7153-01A-11R-2039-07 ARMC1-UBE2W 1 9 chr8:65613244:- chr8:73830472:- INFRAME NA TCGA-78-7153-01A-11R-2039-07 EIF4G3-NSUN4 2 5 chr1:21089138:- chr1:46352868:+ FRAMESHIFT NA TCGA-78-7153-01A-11R-2039-07 CCDC174-ECHDC1 2 3 chr3:14666947:+ chr6:127290277:- FRAMESHIFT NA TCGA-78-7153-01A-11R-2039-07 PTPRU-SBSPON 1 7 chr1:29236717:+ chr8:73071870:- INFRAME NA TCGA-78-7153-01A-11R-2039-07 STK3-ZHX2 2 3 chr8:98749276:- chr8:122951292:+ . NA TCGA-78-7153-01A-11R-2039-07 ASAP1-LRRCC1 1 6 chr8:130236922:- chr8:85145389:+ FRAMESHIFT NA TCGA-78-7153-01A-11R-2039-07 KDM4A-RYBP 1 5 chr1:43683804:+ chr3:72379427:- FRAMESHIFT Likely Oncogenic NA TCGA-78-7154-01A-11R-2039-07 TRRAP-TMEM168 3 28 chr7:98955304:+ chr7:112784953:- . NA TCGA-78-7154-01A-11R-2039-07 AGFG2-ARPC1A 1 33 chr7:100564303:+ chr7:99363543:+ FRAMESHIFT NA TCGA-78-7154-01A-11R-2039-07 HIPK2-ADCK2 3 15 chr7:139777605:- chr7:140674611:+ FRAMESHIFT NA TCGA-78-7154-01A-11R-2039-07 ZMYM5-IFT88 2 15 chr13:19851355:- chr13:20641290:+ INFRAME NA TCGA-78-7154-01A-11R-2039-07 SPATA6-BEND5 3 8 chr1:48305787:- chr1:48728043:- FRAMESHIFT NA TCGA-78-7154-01A-11R-2039-07 STAG3L5P-IMMP2L 1 13 chr7:100345968:+ chr7:111521449:- . NA TCGA-78-7154-01A-11R-2039-07 CCDC91-HCG18 2 8 chr12:28307749:+ chr6:30314482:- . NA TCGA-78-7155-01A-11R-2039-07 EAPP-SNX6 18 38 chr14:34533444:- chr14:34568013:- FRAMESHIFT NA TCGA-78-7155-01A-11R-2039-07 SEC24A-DDX46 12 34 chr5:134666996:+ chr5:134777574:+ INFRAME NA TCGA-78-7155-01A-11R-2039-07 GLO1-CASC15 7 50 chr6:38702971:- chr6:22214307:+ . NA TCGA-78-7155-01A-11R-2039-07 TM9SF1-NPAS3 3 52 chr14:24192648:- chr14:33612405:+ FRAMESHIFT NA TCGA-78-7155-01A-11R-2039-07 EFCAB2-SDCCAG8 2 12 chr1:245059458:+ chr1:243286272:+ INFRAME NA TCGA-78-7155-01A-11R-2039-07 CEP85-FAM110D 1 11 chr1:26244318:+ chr1:26161212:+ . NA TCGA-78-7155-01A-11R-2039-07 CDK13-AMPH 2 2 chr7:40002031:+ chr7:38535011:- FRAMESHIFT NA TCGA-78-7155-01A-11R-2039-07 MYO1D-ASIC2 1 2 chr17:32876778:- chr17:33028392:- FRAMESHIFT NA TCGA-78-7159-01A-11R-2039-07 NUF2-TIMM17A 3 5 chr1:163347938:+ chr1:201957281:+ INFRAME NA TCGA-78-7161-01A-11R-2039-07 NDUFV2-MIR3976HG 5 123 chr18:9122681:+ chr18:5793587:+ . NA TCGA-78-7161-01A-11R-2039-07 PAK1-CNIH4 11 56 chr11:77392331:- chr1:224365879:+ FRAMESHIFT NA TCGA-78-7161-01A-11R-2039-07 RAPGEF6-SUSD4 11 28 chr5:131592383:- chr1:223235100:- FRAMESHIFT NA TCGA-78-7161-01A-11R-2039-07 MYL12A-LPIN2 4 21 chr18:3254050:+ chr18:2960849:- FRAMESHIFT NA TCGA-78-7161-01A-11R-2039-07 SFTPB-C3 1 32 chr2:85665289:- chr19:6696659:- INFRAME NA TCGA-78-7161-01A-11R-2039-07 TSC22D1-PLEKHA5 3 19 chr13:44573163:- chr12:19274516:+ INFRAME NA TCGA-78-7161-01A-11R-2039-07 TWSG1-MYL12A 2 21 chr18:9360071:+ chr18:3253233:+ FRAMESHIFT NA TCGA-78-7161-01A-11R-2039-07 PGM2L1-RBBP5 4 2 chr11:74398051:- chr1:205105168:- FRAMESHIFT NA TCGA-78-7161-01A-11R-2039-07 DLEU2-BMP4 2 8 chr13:50068097:- chr14:53953400:- . NA TCGA-78-7161-01A-11R-2039-07 SHANK2-WNT11 1 7 chr11:70798443:- chr11:76191856:- FRAMESHIFT NA TCGA-78-7161-01A-11R-2039-07 LPIN2-PARP4 1 6 chr18:2954504:- chr13:24503777:- . NA TCGA-78-7161-01A-11R-2039-07 FANCA-CACNA2D4 1 3 chr16:89752138:- chr12:1846689:- FRAMESHIFT Likely Oncogenic NA TCGA-78-7161-01A-11R-2039-07 TSNARE1-FAM49B 1 3 chr8:142284413:- chr8:129879471:- . NA TCGA-78-7161-01A-11R-2039-07 IQSEC1-GSTM3 1 2 chr3:12967387:- chr1:109739493:- FRAMESHIFT NA TCGA-78-7167-01A-11R-2066-07 CSPP1-MAN1A2 1 14 chr8:67159137:+ chr1:117402186:+ FRAMESHIFT NA TCGA-78-7220-01A-11R-2039-07 GOLGA5-RIN3 3 15 chr14:92833347:+ chr14:92641238:+ INFRAME NA TCGA-78-7220-01A-11R-2039-07 WNK1-B4GALNT3 1 16 chr12:862270:+ chr12:535166:+ FRAMESHIFT NA TCGA-78-7536-01A-11R-2066-07 SLC16A14-SP110 248 1006 chr2:230049761:- chr2:230211553:- INFRAME NA TCGA-78-7536-01A-11R-2066-07 MVB12B-TMC1 4 42 chr9:126395697:+ chr9:72740119:+ INFRAME NA TCGA-78-7536-01A-11R-2066-07 HDAC4-SNX18 4 33 chr2:239236593:- chr5:54543179:+ INFRAME NA TCGA-78-7536-01A-11R-2066-07 STRBP-ASTN2 7 21 chr9:123169902:- chr9:116651793:- INFRAME NA TCGA-78-7536-01A-11R-2066-07 EPS8-PRH2 5 15 chr12:15789161:- chr12:10930269:+ . NA TCGA-78-7536-01A-11R-2066-07 PPP1R13B-BAG5 4 9 chr14:103847299:- chr14:103561192:- FRAMESHIFT NA TCGA-78-7536-01A-11R-2066-07 TANC1-NR4A2 5 3 chr2:159001189:+ chr2:156330791:- . NA TCGA-78-7536-01A-11R-2066-07 CLNS1A-SMIM15 5 1 chr11:77637590:- chr5:61161227:- . NA TCGA-78-7536-01A-11R-2066-07 ZNF268-ASB1 2 6 chr12:133182030:+ chr2:238444342:+ FRAMESHIFT NA TCGA-78-7536-01A-11R-2066-07 DTD1-MACROD2 3 1 chr20:18744271:+ chr20:14888143:+ . NA TCGA-78-7539-01A-11R-2066-07 BMPR2-KANSL1L 11 38 chr2:202377550:+ chr2:210098207:- FRAMESHIFT NA TCGA-78-7539-01A-11R-2066-07 THBS3-HDGF 3 8 chr1:155206200:- chr1:156745373:- FRAMESHIFT NA TCGA-78-7539-01A-11R-2066-07 ANKRD17-SQRDL 3 4 chr4:73258276:- chr15:45658907:+ . NA TCGA-78-7539-01A-11R-2066-07 NINL-GBAS 2 7 chr20:25496663:- chr7:55983728:+ FRAMESHIFT NA TCGA-78-7542-01A-21R-2066-07 MET-CNTNAP5 4 67 chr7:116700284:+ chr2:124242200:+ FRAMESHIFT NA TCGA-78-7542-01A-21R-2066-07 PRPF4B-CDYL 8 22 chr6:4021466:+ chr6:4935515:+ FRAMESHIFT NA TCGA-78-8640-01A-11R-2403-07 EFR3A-ZFAT 13 75 chr8:131987702:+ chr8:134565421:- INFRAME NA TCGA-78-8640-01A-11R-2403-07 EFR3A-PHF20L1 7 13 chr8:131904322:+ chr8:132811046:+ INFRAME NA TCGA-78-8640-01A-11R-2403-07 RASAL2-GALNTL6 2 4 chr1:178300118:+ chr4:172809361:+ INFRAME NA TCGA-78-8640-01A-11R-2403-07 FUOM-DOCK1 1 7 chr10:133357923:- chr10:127257335:+ FRAMESHIFT NA TCGA-78-8640-01A-11R-2403-07 PPP1R13L-OPA3 1 3 chr19:45391880:- chr19:45529456:- FRAMESHIFT NA TCGA-78-8648-01A-11R-2403-07 NPEPPS-KPNB1 2 3 chr17:47531555:+ chr17:47663089:+ INFRAME NA TCGA-78-8655-01A-11R-2403-07 INSR-WDR62 1 3 chr19:7267345:- chr19:36089038:+ INFRAME NA TCGA-78-8660-01A-11R-2403-07 CBFB-NUTF2 47 153 chr16:67036755:+ chr16:67868340:+ INFRAME NA TCGA-78-8660-01A-11R-2403-07 TNRC18-RNF216 13 44 chr7:5394440:- chr7:5624125:- FRAMESHIFT NA TCGA-78-8660-01A-11R-2403-07 HIF1A-LRRC9 9 54 chr14:61695839:+ chr14:59944589:+ FRAMESHIFT NA TCGA-78-8660-01A-11R-2403-07 GTF2A1-KIAA0391 15 26 chr14:81216413:- chr14:35180670:+ INFRAME NA TCGA-78-8660-01A-11R-2403-07 SAFB2-LONP1 10 25 chr19:5598793:- chr19:5708403:- INFRAME NA TCGA-78-8660-01A-11R-2403-07 INPP5B-SF3A3 8 30 chr1:37872930:- chr1:37969735:- INFRAME NA TCGA-78-8660-01A-11R-2403-07 ERCC1-CEACAM5 5 26 chr19:45478736:- chr19:41727234:+ . NA TCGA-78-8660-01A-11R-2403-07 FBXO34-HECTD1 2 36 chr14:55271537:+ chr14:31169468:- . NA TCGA-78-8660-01A-11R-2403-07 HMOX2-CDIP1 5 17 chr16:4476487:+ chr16:4514664:- . NA TCGA-78-8660-01A-11R-2403-07 RALY-DEFB123 3 19 chr20:33994131:+ chr20:31450029:+ . NA TCGA-78-8660-01A-11R-2403-07 BAZ1A-LRRC9 1 6 chr14:34862044:- chr14:59978017:+ FRAMESHIFT NA TCGA-78-8660-01A-11R-2403-07 RBCK1-MACROD2 1 5 chr20:408779:+ chr20:14493479:+ INFRAME NA TCGA-78-8662-01A-11R-2403-07 SQRDL-SPATA5L1 1 4 chr15:45635108:+ chr15:45405320:+ . NA TCGA-78-8662-01A-11R-2403-07 YEATS4-SLC35E3 1 4 chr12:69365884:+ chr12:68759157:+ INFRAME NA TCGA-80-5607-01A-31R-1949-07 HCG18-TINAG 1 5 chr6:30294471:- chr6:54389791:+ . NA TCGA-80-5608-01A-31R-1949-07 ARID1B-PARK2 2 20 chr6:156829421:+ chr6:162443473:- FRAMESHIFT Likely Oncogenic NA TCGA-80-5608-01A-31R-1949-07 PTPRK-FGF7 6 3 chr6:128184432:- chr15:49483151:+ INFRAME NA TCGA-80-5608-01A-31R-1949-07 SDC4-TSHZ2 2 14 chr20:45348325:- chr20:53487144:+ . NA TCGA-80-5608-01A-31R-1949-07 SFTPB-RPLP0 2 8 chr2:85662029:- chr12:120198631:- INFRAME NA TCGA-80-5608-01A-31R-1949-07 ATP5B-CALCA 1 1 chr12:56645837:- chr11:14971201:- . NA TCGA-80-5611-01A-01R-1628-07 FHDC1-ARFIP1 13 74 chr4:152954319:+ chr4:152910064:+ INFRAME NA TCGA-80-5611-01A-01R-1628-07 YWHAE-SPNS3 7 12 chr17:1361092:- chr17:4478572:+ FRAMESHIFT NA TCGA-80-5611-01A-01R-1628-07 AHCYL1-LRRIQ3 2 9 chr1:109985172:+ chr1:74109553:- FRAMESHIFT NA TCGA-80-5611-01A-01R-1628-07 ZSCAN22-ZNF418 3 5 chr19:58327114:+ chr19:57923289:- . NA TCGA-80-5611-01A-01R-1628-07 CPNE8-CNTN1 2 6 chr12:38873004:- chr12:41014228:+ FRAMESHIFT NA TCGA-83-5908-01A-21R-2287-07 MED13-TLDC2 22 71 chr17:62052537:- chr20:36887455:+ FRAMESHIFT NA TCGA-83-5908-01A-21R-2287-07 TANC2-SPAG9 23 62 chr17:63009626:+ chr17:51079704:- FRAMESHIFT NA TCGA-83-5908-01A-21R-2287-07 BRD9-TPPP 14 43 chr5:886592:- chr5:666123:- INFRAME NA TCGA-83-5908-01A-21R-2287-07 DOCK8-OSBP 10 37 chr9:390566:+ chr11:59601838:- INFRAME NA TCGA-83-5908-01A-21R-2287-07 EARS2-VMP1 8 45 chr16:23544514:- chr17:59838295:+ INFRAME NA TCGA-83-5908-01A-21R-2287-07 CTNND1-DOCK8 7 19 chr11:57806983:+ chr9:304581:+ FRAMESHIFT NA TCGA-83-5908-01A-21R-2287-07 KANK2-DOCK6 8 6 chr19:11197484:- chr19:11204330:- . NA TCGA-83-5908-01A-21R-2287-07 SAMHD1-RPN2 6 14 chr20:36904157:- chr20:37184180:+ FRAMESHIFT NA TCGA-83-5908-01A-21R-2287-07 RIC1-DCAF10 3 25 chr9:5656690:+ chr9:37819288:+ INFRAME NA TCGA-83-5908-01A-21R-2287-07 JAK2-CSTF3 1 9 chr9:4986022:+ chr11:33087141:- . Likely Oncogenic NA TCGA-83-5908-01A-21R-2287-07 GLIS3-ARHGAP1 1 3 chr9:4299421:- chr11:46696156:- . NA TCGA-86-6851-01A-11R-1949-07 TMED2-RFLNA 16 73 chr12:123590449:+ chr12:124311818:+ FRAMESHIFT NA TCGA-86-6851-01A-11R-1949-07 ZDHHC17-RNFT2 3 4 chr12:76764329:+ chr12:116833792:+ INFRAME NA TCGA-86-6851-01A-11R-1949-07 GRB2-SLC25A19 2 1 chr17:75393551:- chr17:75283593:- INFRAME NA TCGA-86-7701-01A-11R-2170-07 POLR2H-CHFR 5 15 chr3:184363565:+ chr12:132833237:- . NA TCGA-86-7701-01A-11R-2170-07 DPP3-KDM2A 2 8 chr11:66497477:+ chr11:67228037:+ INFRAME NA TCGA-86-7711-01A-11R-2066-07 PPP4R1-CDH7 1 4 chr18:9577064:- chr18:65880401:+ FRAMESHIFT NA TCGA-86-7711-01A-11R-2066-07 OSGIN2-RIPK2 1 3 chr8:89909721:+ chr8:89789321:+ INFRAME NA TCGA-86-7713-01A-11R-2066-07 PDE4D-CRABP1 203 413 chr5:59038859:- chr15:78347927:+ INFRAME NA TCGA-86-7713-01A-11R-2066-07 SLC14A2-PCAT1 8 24 chr18:45213191:+ chr8:127006555:+ . NA TCGA-86-7953-01A-11R-2187-07 MAX-TEX10 31 31 chr14:65093708:- chr9:100349372:- . NA TCGA-86-7953-01A-11R-2187-07 ARHGEF3-RHAG 15 67 chr3:56882292:- chr6:49619362:- FRAMESHIFT NA TCGA-86-7953-01A-11R-2187-07 ADGRF5-ADGRF1 11 22 chr6:46883559:- chr6:47029104:- . NA TCGA-86-7953-01A-11R-2187-07 ZNF14-STAT5A 1 22 chr19:19732956:- chr17:42295619:+ INFRAME NA TCGA-86-7953-01A-11R-2187-07 TRIP12-BARD1 2 4 chr2:229879982:- chr2:214730508:- INFRAME Likely Oncogenic NA TCGA-86-7954-01A-11R-2187-07 SDC4-NRG1 1092 5225 chr20:45330366:- chr8:32727949:+ INFRAME NA TCGA-86-7954-01A-11R-2187-07 KDM6A-ETFBKMT 57 89 chrX:44873987:+ chr12:31661841:+ . Likely Oncogenic NA TCGA-86-7954-01A-11R-2187-07 USP32-HOXB9 9 102 chr17:60255175:- chr17:48622099:- . NA TCGA-86-7954-01A-11R-2187-07 TRA2A-EPDR1 19 49 chr7:23531789:- chr7:37948840:+ FRAMESHIFT NA TCGA-86-7954-01A-11R-2187-07 USP9X-KDM6A 22 27 chrX:41171958:+ chrX:45010961:+ FRAMESHIFT Likely Oncogenic NA TCGA-86-7954-01A-11R-2187-07 R3HDM2-PLEKHA5 13 17 chr12:57395749:- chr12:19253940:+ . NA TCGA-86-7954-01A-11R-2187-07 RBM10-CMAS 8 32 chrX:47147498:+ chr12:22055149:+ INFRAME Likely Oncogenic NA TCGA-86-7954-01A-11R-2187-07 ESYT1-MED14 5 31 chr12:56139013:+ chrX:40655060:- INFRAME NA TCGA-86-7954-01A-11R-2187-07 R3HDM2-CAPRIN2 4 30 chr12:57395749:- chr12:30751133:- . NA TCGA-86-7954-01A-11R-2187-07 MTAP-POC1B 5 15 chr9:21802781:+ chr12:89492115:- FRAMESHIFT NA TCGA-86-7954-01A-11R-2187-07 ST8SIA1-ABCC9 3 13 chr12:22255280:- chr12:21829060:- INFRAME NA TCGA-86-7954-01A-11R-2187-07 CHD6-ABHD12 2 12 chr20:41512846:- chr20:25323430:- FRAMESHIFT NA TCGA-86-7954-01A-11R-2187-07 CASC1-PLEKHA5 3 3 chr12:25195076:- chr12:19253940:+ FRAMESHIFT NA TCGA-86-7954-01A-11R-2187-07 COX14-USP9X 1 2 chr12:50112301:+ chrX:41223217:+ . NA TCGA-86-7955-01A-11R-2187-07 UNK-NAF1 3 23 chr17:75784984:+ chr4:163164391:- INFRAME NA TCGA-86-7955-01A-11R-2187-07 ANKRD10-MYO16 6 8 chr13:110893028:- chr13:109120370:+ FRAMESHIFT NA TCGA-86-7955-01A-11R-2187-07 ITCH-TSHZ2 3 15 chr20:34424525:+ chr20:53487144:+ . NA TCGA-86-7955-01A-11R-2187-07 SGSH-TBC1D16 3 15 chr17:80217032:- chr17:80013609:- . NA TCGA-86-7955-01A-11R-2187-07 UGDH-TLR6 2 9 chr4:39527283:- chr4:38829537:- . NA TCGA-86-7955-01A-11R-2187-07 NAA15-STPG2 1 11 chr4:139361937:+ chr4:98134459:- INFRAME NA TCGA-86-8054-01A-11R-2241-07 KDM2A-DDR2 10 20 chr11:67240369:+ chr1:162780112:+ INFRAME NA TCGA-86-8054-01A-11R-2241-07 MAPKAPK5-ALDH2 4 7 chr12:111842769:+ chr12:111799906:+ INFRAME NA TCGA-86-8055-01A-11R-2241-07 AMBRA1-TAGLN 2 23 chr11:46593828:- chr11:117203002:+ . NA TCGA-86-8055-01A-11R-2241-07 IMPA2-GALNT1 1 2 chr18:11981765:+ chr18:35654560:+ . NA TCGA-86-8056-01A-11R-2241-07 TAB2-CCNG2 6 4 chr6:149318015:+ chr4:77158533:+ . NA TCGA-86-8056-01A-11R-2241-07 RARS-NBPF19 1 4 chr5:168510686:+ chr1:149408821:+ . NA TCGA-86-8056-01A-11R-2241-07 STK10-SLIT3 1 3 chr5:172156624:- chr5:168700679:- INFRAME NA TCGA-86-8074-01A-11R-2241-07 SCFD2-NARS2 13 60 chr4:53352598:- chr11:78469313:- INFRAME NA TCGA-86-8074-01A-11R-2241-07 UVRAG-KCNE3 2 24 chr11:75852000:+ chr11:74462103:- . NA TCGA-86-8074-01A-11R-2241-07 RNF169-MIR4300HG 1 16 chr11:74789699:+ chr11:82100207:- . NA TCGA-86-8074-01A-11R-2241-07 CYTH3-SPATA18 2 6 chr7:6177823:- chr4:52069821:+ INFRAME NA TCGA-86-8075-01A-11R-2241-07 SECISBP2-NEDD4L 15 64 chr9:89341479:+ chr18:58396167:+ FRAMESHIFT NA TCGA-86-8075-01A-11R-2241-07 FHOD3-MYOM1 17 36 chr18:36372744:+ chr18:3102630:- INFRAME NA TCGA-86-8075-01A-11R-2241-07 NDUFV2-CHST9 6 21 chr18:9117903:+ chr18:26944366:- FRAMESHIFT NA TCGA-86-8075-01A-11R-2241-07 DAPK1-AGTPBP1 7 12 chr9:87499139:+ chr9:85621285:- INFRAME NA TCGA-86-8075-01A-11R-2241-07 ZNF570-MIR548XHG 2 16 chr19:37476434:+ chr21:18612293:- . NA TCGA-86-8075-01A-11R-2241-07 TRA2A-POU6F2 2 2 chr7:23505746:- chr7:39132378:+ . NA TCGA-86-8279-01A-11R-2287-07 KIAA1429-PNLIPRP1 5 9 chr8:94543827:- chr10:116591130:+ FRAMESHIFT NA TCGA-86-8279-01A-11R-2287-07 WSB1-XKR4 2 17 chr17:27294435:+ chr8:55357678:+ FRAMESHIFT NA TCGA-86-8280-01A-11R-2287-07 ATP9A-MACROD2 1 6 chr20:51627600:- chr20:15862745:+ INFRAME NA TCGA-86-8280-01A-11R-2287-07 EIF3H-ZNF596 1 4 chr8:116755666:- chr8:240824:+ . NA TCGA-86-8281-01A-11R-2287-07 ATP1B1-RCSD1 121 456 chr1:169130090:+ chr1:167683900:+ INFRAME NA TCGA-86-8358-01A-11R-2326-07 NDC80-TTC39C 10 20 chr18:2610861:+ chr18:24123834:+ FRAMESHIFT NA TCGA-86-8358-01A-11R-2326-07 KMT2B-RPRD1A 6 34 chr19:35735333:+ chr18:35993268:- . Inconclusive NA TCGA-86-8358-01A-11R-2326-07 SYNE2-ACTN1 8 21 chr14:63853143:+ chr14:68912242:- . NA TCGA-86-8358-01A-11R-2326-07 HSP90AA1-IGHM 5 13 chr14:102101875:- chr14:105856217:- FRAMESHIFT NA TCGA-86-8358-01A-11R-2326-07 MTDH-MATN2 4 4 chr8:97661173:+ chr8:97930953:+ FRAMESHIFT NA TCGA-86-8358-01A-11R-2326-07 APOPT1-ASPG 3 5 chr14:103574170:+ chr14:104111920:+ FRAMESHIFT NA TCGA-86-8358-01A-11R-2326-07 RAB39A-TECTA 2 9 chr11:107928795:+ chr11:121187832:+ INFRAME NA TCGA-86-8358-01A-11R-2326-07 APBA2-NBEAP1 2 7 chr15:28995806:+ chr15:20671268:- . NA TCGA-86-8358-01A-11R-2326-07 MARK3-KIF26A 2 7 chr14:103428440:+ chr14:104152015:+ INFRAME NA TCGA-86-8358-01A-11R-2326-07 PARP6-MYO9A 2 3 chr15:72253437:- chr15:71968125:- INFRAME NA TCGA-86-8358-01A-11R-2326-07 CRKL-SLC25A18 2 2 chr22:20934244:+ chr22:17579745:+ . NA TCGA-86-8358-01A-11R-2326-07 CAMK1D-FRMD4A 1 5 chr10:12666810:+ chr10:13858912:- FRAMESHIFT NA TCGA-86-8358-01A-11R-2326-07 CEP192-TPTE 1 2 chr18:12999588:+ chr21:10590462:+ FRAMESHIFT NA TCGA-86-8359-01A-11R-2326-07 PTK2-RNF139 5 25 chr8:140686632:- chr8:124485831:+ FRAMESHIFT NA TCGA-86-8359-01A-11R-2326-07 FASN-ZNF595 3 6 chr17:82095320:- chr4:59430:+ FRAMESHIFT NA TCGA-86-8585-01A-11R-2403-07 EXOC4-SUPT3H 6 35 chr7:133480138:+ chr6:44829857:- INFRAME NA TCGA-86-8585-01A-11R-2403-07 WNK1-RAD52 1 15 chr12:889223:+ chr12:933076:- . NA TCGA-86-8668-01A-11R-2403-07 SRRM3-CASC16 1 9 chr7:76283101:+ chr16:52591067:- . NA TCGA-86-8668-01A-11R-2403-07 IGHG1-CTSD 1 6 chr14:105742065:- chr11:1754131:- INFRAME NA TCGA-86-8668-01A-11R-2403-07 SPIDR-UBE2V2 1 4 chr8:47702015:+ chr8:48043033:+ FRAMESHIFT NA TCGA-86-8669-01A-11R-2403-07 GPBP1-GOLGA8B 7 20 chr5:57247215:+ chr15:34546982:- . NA TCGA-86-8669-01A-11R-2403-07 CRK-GEMIN4 2 27 chr17:1436790:- chr17:748032:- INFRAME NA TCGA-86-8669-01A-11R-2403-07 MEF2D-INSRR 3 14 chr1:156499432:- chr1:156858693:- . NA TCGA-86-8669-01A-11R-2403-07 KIAA0391-AKAP6 1 2 chr14:35180777:+ chr14:32821402:+ INFRAME NA TCGA-86-8672-01A-21R-2403-07 ST7-ASZ1 8 60 chr7:116953691:+ chr7:117384860:- FRAMESHIFT NA TCGA-86-8672-01A-21R-2403-07 ST7-OT4-ASZ1 11 35 chr7:116955153:+ chr7:117385809:- . NA TCGA-86-8672-01A-21R-2403-07 ST7-OT4_2-ASZ1 11 26 chr7:116955153:+ chr7:117385809:- . NA TCGA-86-8672-01A-21R-2403-07 PRKCA-MARCH10 1 4 chr17:66645511:+ chr17:62801752:- . NA TCGA-86-8672-01A-21R-2403-07 SETDB1-PLEKHO1 1 4 chr1:150930118:+ chr1:150156066:+ FRAMESHIFT NA TCGA-86-8673-01A-11R-2403-07 ARNT-RIIAD1 65 61 chr1:150876543:- chr1:151713469:+ . NA TCGA-86-8673-01A-11R-2403-07 EXOC7-FOXJ1 7 62 chr17:76097796:- chr17:76138120:- FRAMESHIFT NA TCGA-86-8673-01A-11R-2403-07 ALDH9A1-NME7 8 33 chr1:165682107:- chr1:169237687:- INFRAME NA TCGA-86-8673-01A-11R-2403-07 PPP1R37-CACNG1 5 34 chr19:45093527:+ chr17:67044716:+ INFRAME NA TCGA-86-8673-01A-11R-2403-07 PRPF3-CTSS 10 10 chr1:150321592:+ chr1:150765794:- . NA TCGA-86-8673-01A-11R-2403-07 PIP5K1A-C1orf56 4 10 chr1:151227400:+ chr1:151050438:+ INFRAME NA TCGA-86-8673-01A-11R-2403-07 TRMT11-NCOA7 1 20 chr6:126013101:+ chr6:125922682:+ FRAMESHIFT NA TCGA-86-8673-01A-11R-2403-07 ATOH8-GNLY 4 7 chr2:85754957:+ chr2:85695320:+ FRAMESHIFT NA TCGA-86-8673-01A-11R-2403-07 SETD2-KIF9 3 11 chr3:47163854:- chr3:47248086:- FRAMESHIFT Likely Oncogenic NA TCGA-86-8673-01A-11R-2403-07 SHANK2-EFCAB6 3 5 chr11:70659828:- chr22:43540357:- INFRAME NA TCGA-86-8673-01A-11R-2403-07 AUTS2-CFTR 1 4 chr7:70698620:+ chr7:117504253:+ FRAMESHIFT NA TCGA-86-8673-01A-11R-2403-07 B3GNT4-BCL7A 1 4 chr12:122207812:+ chr12:122043886:+ . NA TCGA-86-8674-01A-21R-2403-07 ZNF587B-ZSCAN4 1 4 chr19:57819945:+ chr19:57676041:+ . NA TCGA-86-A4P7-01A-11R-A24X-07 UBE2K-FAM216B 16 31 chr4:39698390:+ chr13:42786763:+ INFRAME NA TCGA-86-A4P7-01A-11R-A24X-07 NPC2-LTBP2 2 62 chr14:74493193:- chr14:74504054:- INFRAME NA TCGA-86-A4P7-01A-11R-A24X-07 FBXL20-TTC17 4 28 chr17:39343180:- chr11:43490239:+ FRAMESHIFT NA TCGA-86-A4P7-01A-11R-A24X-07 PI4KB-SYT11 1 15 chr1:151327271:- chr1:155880500:+ . NA TCGA-91-6828-01A-11R-1858-07 ACTR5-RPRD1B 1 11 chr20:38767596:+ chr20:38089726:+ INFRAME NA TCGA-91-6828-01A-11R-1858-07 LACTB2-ITPR2 1 3 chr8:70638548:- chr12:26483898:- FRAMESHIFT NA TCGA-91-6831-01A-11R-1858-07 RRBP1-TASP1 15 89 chr20:17633460:- chr20:13417521:- FRAMESHIFT NA TCGA-91-6831-01A-11R-1858-07 TAF4-TSHZ2 15 75 chr20:61997550:- chr20:53487144:+ . NA TCGA-91-6831-01A-11R-1858-07 SNAI1-PFDN4 16 47 chr20:49984351:+ chr20:54219019:+ FRAMESHIFT NA TCGA-91-6831-01A-11R-1858-07 ERO1B-HEATR1 2 12 chr1:236225070:- chr1:236558529:- INFRAME NA TCGA-91-6831-01A-11R-1858-07 CIRBP-WDR18 2 8 chr19:1269410:+ chr19:994020:+ . NA TCGA-91-6831-01A-11R-1858-07 MRPL21-LRP5 2 4 chr11:68896515:- chr11:68347847:+ FRAMESHIFT NA TCGA-91-6831-01A-11R-1858-07 RTN3-HRASLS5 1 8 chr11:63681778:+ chr11:63466372:- INFRAME NA TCGA-91-6831-01A-11R-1858-07 TRPC4AP-ADNP 2 3 chr20:35092614:- chr20:50894512:- INFRAME NA TCGA-91-6831-01A-11R-1858-07 PHF20-ADNP 1 6 chr20:35801605:+ chr20:50894512:- FRAMESHIFT NA TCGA-91-6831-01A-11R-1858-07 DOC2B-APBB2 1 5 chr17:156220:- chr4:41100750:- . NA TCGA-91-6835-01A-11R-1858-07 ULK2-UBBP4 7 12 chr17:19810378:- chr17:22204087:+ . NA TCGA-91-6836-01A-21R-1858-07 FAM177A1-KIAA0391 3 108 chr14:35053451:+ chr14:35180670:+ INFRAME NA TCGA-91-6836-01A-21R-1858-07 SSH2-NUFIP2 17 46 chr17:29929938:- chr17:29267530:- FRAMESHIFT NA TCGA-91-6836-01A-21R-1858-07 CLK2-ASH1L 5 20 chr1:155266729:- chr1:155343742:- INFRAME NA TCGA-91-6836-01A-21R-1858-07 CDH1-VPS4A 5 13 chr16:68738411:+ chr16:69316008:+ FRAMESHIFT Likely Oncogenic NA TCGA-91-6836-01A-21R-1858-07 ARID4A-KIAA0586 2 17 chr14:58301690:+ chr14:58540071:+ FRAMESHIFT NA TCGA-91-6836-01A-21R-1858-07 DNAJC1-SKIDA1 3 11 chr10:21920798:- chr10:21523871:- . NA TCGA-91-6840-01A-11R-1949-07 ADGRF5-MEP1A 59 185 chr6:46865042:- chr6:46834578:+ INFRAME NA TCGA-91-6840-01A-11R-1949-07 LARP4-MUCL1 22 305 chr12:50401028:+ chr12:54856770:+ FRAMESHIFT NA TCGA-91-6840-01A-11R-1949-07 TAF8-CRISP1 20 59 chr6:42068607:+ chr6:49852129:- INFRAME NA TCGA-91-6840-01A-11R-1949-07 PPTC7-ARPC3 2 16 chr12:110582809:- chr12:110440388:- INFRAME NA TCGA-91-6840-01A-11R-1949-07 KIAA1958-WDR34 1 8 chr9:112487118:+ chr9:128640939:- . NA TCGA-91-6840-01A-11R-1949-07 DGCR2-EHBP1 1 6 chr22:19064848:- chr2:62993530:+ FRAMESHIFT NA TCGA-91-6840-01A-11R-1949-07 KCNMB4-ALDH3B2 1 4 chr12:70367070:+ chr11:67667635:- . NA TCGA-91-6847-01A-11R-1949-07 TAOK1-BCAS3 5 28 chr17:29510992:+ chr17:60808004:+ FRAMESHIFT NA TCGA-91-6847-01A-11R-1949-07 DDX19A-ABCC11 5 5 chr16:70350605:+ chr16:48235177:- . NA TCGA-91-6847-01A-11R-1949-07 CDKAL1-C6orf89 2 14 chr6:20548705:+ chr6:36894504:+ . NA TCGA-91-6847-01A-11R-1949-07 BCAS3-GIT1 3 8 chr17:60868683:+ chr17:29578779:- INFRAME NA TCGA-91-6847-01A-11R-1949-07 B9D1-SPECC1 1 15 chr17:19343790:- chr17:20057677:+ . NA TCGA-91-6847-01A-11R-1949-07 SHROOM3-SCARB2 1 1 chr4:76770898:+ chr4:76195864:- INFRAME NA TCGA-91-6848-01A-11R-1949-07 TMEM9-MYO5B 6 60 chr1:201143820:- chr18:49895174:- INFRAME NA TCGA-91-6848-01A-11R-1949-07 PTK2-ANKRD11 2 14 chr8:141001125:- chr16:89418368:- . NA TCGA-91-6848-01A-11R-1949-07 PTK2-CACNG8 2 13 chr8:141000880:- chr19:53978146:+ . NA TCGA-91-6848-01A-11R-1949-07 KCTD10-TPCN1 1 9 chr12:109469515:- chr12:113278772:+ FRAMESHIFT NA TCGA-91-6848-01A-11R-1949-07 EPHA5-RUFY3 1 8 chr4:65490377:- chr4:70762519:+ INFRAME NA TCGA-91-6848-01A-11R-1949-07 OSBPL6-SPHKAP 1 4 chr2:178194674:+ chr2:228027543:- . NA TCGA-91-6848-01A-11R-1949-07 UNG-NEMP1 1 4 chr12:109099284:+ chr12:57070893:- INFRAME NA TCGA-91-6848-01A-11R-1949-07 ZNF37A-EBF3 1 3 chr10:38096632:+ chr10:129877849:- FRAMESHIFT NA TCGA-91-7771-01A-11R-2170-07 ARMC1-SPAG11B 4 25 chr8:65613244:- chr8:7451199:- FRAMESHIFT NA TCGA-91-7771-01A-11R-2170-07 CPSF6-SOX2-OT 5 18 chr12:69262562:+ chr3:181088877:+ . NA TCGA-91-7771-01A-11R-2170-07 RPS6KC1-TFPI 5 6 chr1:213077816:+ chr2:187503770:- . NA TCGA-91-7771-01A-11R-2170-07 KIFC3-CNGB1 1 21 chr16:57779361:- chr16:57888074:- . NA TCGA-91-7771-01A-11R-2170-07 MECOM-FRMD5 3 8 chr3:169092958:- chr15:43888266:- FRAMESHIFT NA TCGA-91-7771-01A-11R-2170-07 TLN2-RBPMS2 1 8 chr15:62390685:+ chr15:64751638:- . NA TCGA-91-7771-01A-11R-2170-07 MAP1LC3A-ASIP 2 2 chr20:34546916:+ chr20:34260365:+ . NA TCGA-91-7771-01A-11R-2170-07 NFE2-STARD7 1 4 chr12:54300801:- chr2:96187301:- . NA TCGA-91-8496-01A-11R-2403-07 BBS2-ADAT1 1 4 chr16:56505950:- chr16:75603171:- FRAMESHIFT NA TCGA-91-8497-01A-11R-2403-07 NFAT5-HHAT 3 26 chr16:69566374:+ chr1:210387468:+ FRAMESHIFT NA TCGA-91-8497-01A-11R-2403-07 PHF21A-ALKBH3 1 6 chr11:46120935:- chr11:43882583:+ . NA TCGA-91-8499-01A-11R-2403-07 IL13RA1-WDR44 40 237 chrX:118741156:+ chrX:118387340:+ INFRAME NA TCGA-91-8499-01A-11R-2403-07 FAM162A-CASR 9 22 chr3:122384299:+ chr3:122261528:+ FRAMESHIFT NA TCGA-91-8499-01A-11R-2403-07 GK5-PAQR9 2 6 chr3:142198802:- chr3:142952850:- FRAMESHIFT NA TCGA-91-8499-01A-11R-2403-07 CYTH1-LGALS3BP 1 7 chr17:78692417:- chr17:78972704:- FRAMESHIFT NA TCGA-91-8499-01A-11R-2403-07 CBLL1-SLC26A4 1 6 chr7:107749047:+ chr7:107661639:+ . NA TCGA-91-8499-01A-11R-2403-07 PHF21A-AMBRA1 1 3 chr11:46092183:- chr11:46494204:- . NA TCGA-91-A4BC-01A-11R-A24H-07 PDGFRL-VPS37A 4 35 chr8:17589765:+ chr8:17274733:+ INFRAME NA TCGA-91-A4BC-01A-11R-A24H-07 VPS72-ROBO2 8 15 chr1:151184317:- chr3:77568313:+ INFRAME NA TCGA-91-A4BC-01A-11R-A24H-07 ASH1L-INSRR 8 11 chr1:155521100:- chr1:156854303:- FRAMESHIFT NA TCGA-91-A4BC-01A-11R-A24H-07 STK3-SPRR2E 4 10 chr8:98749276:- chr1:153093770:- . NA TCGA-91-A4BC-01A-11R-A24H-07 FAM65A-LRRC36 2 5 chr16:67528914:+ chr16:67341957:+ . NA TCGA-91-A4BC-01A-11R-A24H-07 KCNK5-PDE4DIP 1 6 chr6:39228926:- chr1:148889784:+ INFRAME NA TCGA-91-A4BD-01A-11R-A24H-07 MUC1-PKLR 2 3 chr1:155192183:- chr1:155293590:- INFRAME NA TCGA-93-7348-01A-21R-2039-07 CLINT1-MARCH11 18 138 chr5:157858930:- chr5:16067793:- FRAMESHIFT NA TCGA-93-7348-01A-21R-2039-07 CACNB1-IGSF8 2 3 chr17:39183713:- chr1:160095246:- FRAMESHIFT NA TCGA-93-7348-01A-21R-2039-07 SLC43A1-COG7 2 1 chr11:57513958:- chr16:23393347:- FRAMESHIFT NA TCGA-93-8067-01A-11R-2287-07 ARPC1B-MYH16 32 101 chr7:99394119:+ chr7:99303065:+ . NA TCGA-93-8067-01A-11R-2287-07 FYTTD1-DNAJC7 20 84 chr3:197778464:+ chr17:41994944:- INFRAME NA TCGA-93-8067-01A-11R-2287-07 SWAP70-PYY2 9 69 chr11:9694286:+ chr17:28227306:+ . NA TCGA-93-8067-01A-11R-2287-07 RHOT1-LRRC37B 4 40 chr17:32142729:+ chr17:32047761:+ INFRAME NA TCGA-93-8067-01A-11R-2287-07 ZNF143-TMEM41B 12 4 chr11:9461076:+ chr11:9287806:- . NA TCGA-93-8067-01A-11R-2287-07 TCF20-MKL1 6 24 chr22:42209651:- chr22:40435554:- FRAMESHIFT NA TCGA-93-8067-01A-11R-2287-07 ZMYM4-SSBP4 5 20 chr1:35390098:+ chr19:18427351:+ FRAMESHIFT NA TCGA-93-8067-01A-11R-2287-07 RAI1-MRGPRF 6 6 chr17:17681793:+ chr11:69006261:- . NA TCGA-93-8067-01A-11R-2287-07 SLC7A6-NFATC3 1 20 chr16:68275249:+ chr16:68214329:+ INFRAME NA TCGA-93-8067-01A-11R-2287-07 SDF2-ARHGAP44 1 18 chr17:28662046:- chr17:12928929:+ . NA TCGA-93-8067-01A-11R-2287-07 GPX8-TTLL1 2 5 chr5:55160243:+ chr22:43059527:- INFRAME NA TCGA-93-A4JN-01A-11R-A24X-07 KIF5B-MET 6 43 chr10:32017143:- chr7:116771849:+ INFRAME NA TCGA-93-A4JO-01A-21R-A24X-07 ZDHHC20-MIPEP 72 291 chr13:21413652:- chr13:23756618:- FRAMESHIFT NA TCGA-93-A4JO-01A-21R-A24X-07 FRMD8-DPF2 4 51 chr11:65394099:+ chr11:65351683:+ FRAMESHIFT NA TCGA-93-A4JO-01A-21R-A24X-07 CD2AP-DVL1 2 8 chr6:47478248:+ chr1:1342758:- FRAMESHIFT NA TCGA-93-A4JP-01A-11R-A24X-07 PTPN2-MYL12B 139 1003 chr18:12884073:- chr18:3277253:+ FRAMESHIFT NA TCGA-93-A4JP-01A-11R-A24X-07 STIM1-NUP98 2 14 chr11:3856409:+ chr11:3735324:- INFRAME NA TCGA-93-A4JP-01A-11R-A24X-07 PRMT2-STX18 3 7 chr21:46648619:+ chr4:4471706:- INFRAME NA TCGA-93-A4JP-01A-11R-A24X-07 MSI2-U95743.1 1 10 chr17:57529724:+ chr16:13730436:- . NA TCGA-93-A4JQ-01A-11R-A24X-07 PLAA-HACD4 10 87 chr9:26946897:- chr9:21029398:- INFRAME NA TCGA-93-A4JQ-01A-11R-A24X-07 MED13L-COL23A1 9 55 chr12:116277060:- chr5:178263324:- INFRAME NA TCGA-93-A4JQ-01A-11R-A24X-07 ATAD2-LRP12 8 12 chr8:123396187:- chr8:104509074:- FRAMESHIFT NA TCGA-93-A4JQ-01A-11R-A24X-07 NDUFS4-UBE2D2 1 18 chr5:53560760:+ chr5:139600372:+ FRAMESHIFT NA TCGA-93-A4JQ-01A-11R-A24X-07 TEC-NCAM2 2 8 chr4:48269752:- chr21:21373863:+ . NA TCGA-93-A4JQ-01A-11R-A24X-07 CASP7-EDRF1 1 11 chr10:113697603:+ chr10:125737918:+ FRAMESHIFT NA TCGA-93-A4JQ-01A-11R-A24X-07 EIF2AK4-AVEN 1 2 chr15:40002788:+ chr15:33867855:- FRAMESHIFT NA TCGA-95-7039-01A-11R-1949-07 MST1R-FNDC3B 9 72 chr3:49895167:- chr3:172186712:+ INFRAME NA TCGA-95-7039-01A-11R-1949-07 CCDC90B-CLPB 1 22 chr11:83285873:- chr11:72302348:- INFRAME NA TCGA-95-7039-01A-11R-1949-07 ATXN1-CGA 3 6 chr6:16657776:- chr6:87088207:- . NA TCGA-95-7039-01A-11R-1949-07 FNDC3B-ATP13A4 1 9 chr3:172133546:+ chr3:193514871:- FRAMESHIFT NA TCGA-95-7039-01A-11R-1949-07 SEMA3F-SLC9A9 2 4 chr3:50155147:+ chr3:143467190:- . NA TCGA-95-7039-01A-11R-1949-07 SH3GL1-MLLT1 1 2 chr19:4400324:- chr19:6270759:- INFRAME NA TCGA-95-7043-01A-11R-1949-07 NIPBL-ATP2A2 8 8 chr5:36877178:+ chr12:110282604:+ . NA TCGA-95-7043-01A-11R-1949-07 THRA-PSMD3 2 5 chr17:40089333:+ chr17:39984294:+ FRAMESHIFT NA TCGA-95-7043-01A-11R-1949-07 AVEN-GOLGA8B 1 3 chr15:34003032:- chr15:34553956:- . NA TCGA-95-7562-01A-11R-2241-07 UBE2D2-SND1 11 76 chr5:139561815:+ chr7:128074502:+ INFRAME NA TCGA-95-7562-01A-11R-2241-07 HNRNPH3-ATAD1 9 30 chr10:68332216:+ chr10:87814612:- . NA TCGA-95-7567-01A-11R-2066-07 ATP11A-MCF2L 3 4 chr13:112690455:+ chr13:113014763:+ FRAMESHIFT NA TCGA-95-7948-01A-11R-2187-07 GTF2E2-ACE 5 10 chr8:30653433:- chr17:63484330:+ FRAMESHIFT NA TCGA-95-8039-01A-11R-2241-07 POLB-UVRAG 7 29 chr8:42345019:+ chr11:76008807:+ INFRAME NA TCGA-95-8494-01A-11R-2326-07 INTS4-RSF1 3 27 chr11:77994590:- chr11:77678153:- FRAMESHIFT NA TCGA-95-8494-01A-11R-2326-07 FAM222B-GYS2 2 13 chr17:28842682:- chr12:21569009:- . NA TCGA-95-8494-01A-11R-2326-07 UHRF1-KDM4B 2 7 chr19:4932956:+ chr19:5071010:+ INFRAME NA TCGA-95-8494-01A-11R-2326-07 DPYD-TGFBR3 1 6 chr1:97679095:- chr1:91683857:- INFRAME NA TCGA-95-A4VK-01A-11R-A262-07 SLC12A7-RASGEF1C 21 48 chr5:1111868:- chr5:180138058:- . NA TCGA-95-A4VK-01A-11R-A262-07 ZNF354A-SLC12A7 3 21 chr5:178725376:- chr5:1089128:- FRAMESHIFT NA TCGA-95-A4VK-01A-11R-A262-07 SPOCK1-ARHGAP26 5 5 chr5:137498373:- chr5:143120988:+ FRAMESHIFT NA TCGA-95-A4VK-01A-11R-A262-07 TBC1D9B-TENM2 2 15 chr5:179907704:- chr5:167875986:+ INFRAME NA TCGA-95-A4VK-01A-11R-A262-07 SQSTM1-GRIA1 1 18 chr5:179806591:+ chr5:153698044:+ . NA TCGA-95-A4VK-01A-11R-A262-07 ULK2-ACADVL 4 1 chr17:19838501:- chr17:7220122:+ FRAMESHIFT NA TCGA-95-A4VP-01A-21R-A262-07 TRIP12-SLC16A14 5 16 chr2:229858772:- chr2:230037531:- INFRAME NA TCGA-95-A4VP-01A-21R-A262-07 ARFGEF2-PTP4A1 1 2 chr20:48988388:+ chr6:63576436:+ INFRAME NA TCGA-97-7546-01A-11R-2039-07 MYCBP2-SLC52A3 1 2 chr13:77188951:- chr20:768482:- . NA TCGA-97-7547-01A-11R-2039-07 PLA2G10-CLEC16A 3 44 chr16:14694133:- chr16:11020193:+ INFRAME NA TCGA-97-7547-01A-11R-2039-07 BPIFB1-BPIFB4 1 22 chr20:33291988:+ chr20:33111414:+ INFRAME NA TCGA-97-7552-01A-11R-2039-07 ROCK1-CABYR 12 28 chr18:21110818:- chr18:24155701:+ FRAMESHIFT NA TCGA-97-7553-01A-21R-2039-07 BICC1-DPYSL4 3 10 chr10:58702143:+ chr10:132200356:+ INFRAME NA TCGA-97-7554-01A-11R-2039-07 APBA2-C12orf60 13 29 chr15:28886278:+ chr12:14822912:+ . NA TCGA-97-7554-01A-11R-2039-07 NME2-CCL4L2 10 40 chr17:51168343:+ chr17:36211776:+ FRAMESHIFT NA TCGA-97-7554-01A-11R-2039-07 EPS8-GYS2 2 15 chr12:15789161:- chr12:21580523:- . NA TCGA-97-7554-01A-11R-2039-07 VTI1A-C10orf90 2 13 chr10:112538330:+ chr10:126513939:- INFRAME NA TCGA-97-7554-01A-11R-2039-07 GOSR2-UTP6 1 9 chr17:46923221:+ chr17:31880754:- INFRAME NA TCGA-97-7554-01A-11R-2039-07 NAPSA-COL1A1 1 6 chr19:50361969:- chr17:50192693:- FRAMESHIFT NA TCGA-97-7937-01A-11R-2170-07 AHNAK-STIP1 12 55 chr11:62546660:- chr11:64193078:+ . NA TCGA-97-7937-01A-11R-2170-07 RNF10-FBXO21 9 46 chr12:120534968:+ chr12:117177641:- FRAMESHIFT NA TCGA-97-7937-01A-11R-2170-07 PER3-DNAJC11 7 35 chr1:7801191:+ chr1:6636246:- FRAMESHIFT NA TCGA-97-7937-01A-11R-2170-07 SMAD2-C10orf90 1 41 chr18:47868323:- chr10:126513939:- INFRAME Likely Oncogenic NA TCGA-97-7937-01A-11R-2170-07 LIN52-SYNE2 3 28 chr14:74095985:+ chr14:64208758:+ INFRAME NA TCGA-97-8171-01A-11R-2287-07 PSMB6-ENO3 14 42 chr17:4796296:+ chr17:4951828:+ . NA TCGA-97-8171-01A-11R-2287-07 VPS13B-SGCZ 3 3 chr8:99193057:+ chr8:14324204:- FRAMESHIFT NA TCGA-97-8174-01A-11R-2287-07 PGC-SFTPB 4 257 chr6:41736964:- chr2:85666706:- FRAMESHIFT NA TCGA-97-8174-01A-11R-2287-07 SLC22A25-PACS1 33 53 chr11:63228461:- chr11:66230548:+ FRAMESHIFT NA TCGA-97-8174-01A-11R-2287-07 ECHDC1-FYN 20 57 chr6:127314816:- chr6:111708020:- INFRAME NA TCGA-97-8174-01A-11R-2287-07 KMT2A-FYN 10 20 chr11:118512025:+ chr6:111704102:- FRAMESHIFT Likely Oncogenic NA TCGA-97-8174-01A-11R-2287-07 SESN1-ECHDC1 8 10 chr6:109093795:- chr6:127290277:- FRAMESHIFT NA TCGA-97-8174-01A-11R-2287-07 AFF3-NPAS2 2 9 chr2:100006632:- chr2:100988079:+ INFRAME NA TCGA-97-8174-01A-11R-2287-07 C11orf80-FADS1 1 2 chr11:66828364:+ chr11:61804761:- FRAMESHIFT NA TCGA-97-8174-01A-11R-2287-07 CD4-PGC 1000 1000 chr12:6816147:+ chr6:41747384:- . NA TCGA-97-8175-01A-11R-2287-07 SREBF2-PLPP4 46 184 chr22:41833358:+ chr10:120575131:+ INFRAME NA TCGA-97-8175-01A-11R-2287-07 PSMC3IP-SPECC1 1 3 chr17:42573311:- chr17:20204333:+ FRAMESHIFT NA TCGA-97-8176-01A-11R-2403-07 LCN2-LRSAM1 1 5 chr9:128149663:+ chr9:127461173:+ INFRAME NA TCGA-97-8176-01A-11R-2403-07 E2F5-CA3 1 2 chr8:85209409:+ chr8:85439712:+ INFRAME NA TCGA-97-8177-01A-11R-2287-07 ARID1B-TMEM242 3 24 chr6:157036876:+ chr6:157292999:- INFRAME Likely Oncogenic NA TCGA-97-8177-01A-11R-2287-07 TOX3-HEYL 4 10 chr16:52463934:- chr1:39632715:- FRAMESHIFT NA TCGA-97-8177-01A-11R-2287-07 PRKCZ-TP53TG5 1 2 chr1:2059591:+ chr20:45377613:- FRAMESHIFT NA TCGA-97-8179-01A-11R-2287-07 KMT2C-SYTL5 1 16 chr7:152435626:- chrX:38054213:+ INFRAME Likely Oncogenic NA TCGA-97-8179-01A-11R-2287-07 LRP5-OR4G4P 4 3 chr11:68414012:+ chr1:53282:+ . NA TCGA-97-8179-01A-11R-2287-07 EXOC1-IDO1 1 10 chr4:55902538:+ chr8:39922552:+ FRAMESHIFT NA TCGA-97-8547-01A-11R-2403-07 NUDCD1-MROH1 9 8 chr8:109271005:- chr8:144248877:+ INFRAME NA TCGA-97-8547-01A-11R-2403-07 TMEM161B-FAM81B 3 22 chr5:88228445:- chr5:95413947:+ INFRAME NA TCGA-97-8552-01A-11R-2403-07 SNX29-NLRP1 3 18 chr16:12403529:+ chr17:5584500:- . NA TCGA-97-A4LX-01A-11R-A24X-07 ZNF343-PRPSAP2 10 7 chr20:2508881:- chr17:18923914:+ . NA TCGA-97-A4LX-01A-11R-A24X-07 TAOK1-MAP2K4 2 12 chr17:29491865:+ chr17:12139839:+ FRAMESHIFT Likely Oncogenic NA TCGA-97-A4M1-01A-11R-A24X-07 CBX4-RFK 3 39 chr17:79837837:- chr9:76388656:- FRAMESHIFT NA TCGA-97-A4M1-01A-11R-A24X-07 PHLPP2-KIF22 1 9 chr16:71676447:- chr16:29796893:+ INFRAME NA TCGA-97-A4M1-01A-11R-A24X-07 PDZD2-COL27A1 1 8 chr5:32093024:+ chr9:114252593:+ INFRAME NA TCGA-97-A4M1-01A-11R-A24X-07 AGPAT3-PFKL 2 1 chr21:43865345:+ chr21:44306681:+ . NA TCGA-97-A4M1-01A-11R-A24X-07 PRKAG2-ADCK2 1 4 chr7:151876507:- chr7:140674611:+ INFRAME NA TCGA-97-A4M1-01A-11R-A24X-07 ZNF786-LANCL2 1 3 chr7:149090623:- chr7:55398423:+ FRAMESHIFT NA TCGA-97-A4M3-01A-11R-A24X-07 NCSTN-SPRR2G 427 1201 chr1:160354290:+ chr1:153150131:- . NA TCGA-97-A4M3-01A-11R-A24X-07 DPP3-FKBP2 17 186 chr11:66504774:+ chr11:64243841:+ INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 CHKA-HNF1B 20 85 chr11:68074717:- chr17:37687392:- INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 FAT3-DPP3 9 48 chr11:92355404:+ chr11:66509079:+ INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 TP53BP1-STAU2 6 54 chr15:43428016:- chr8:73527804:- INFRAME Likely Oncogenic NA TCGA-97-A4M3-01A-11R-A24X-07 FAT3-CDH26 3 23 chr11:92887113:+ chr20:60006713:+ FRAMESHIFT NA TCGA-97-A4M3-01A-11R-A24X-07 LHCGR-GTF2A1L 2 16 chr2:48694224:- chr2:48679335:+ FRAMESHIFT NA TCGA-97-A4M3-01A-11R-A24X-07 LRP5-CHD6 2 12 chr11:68363943:+ chr20:41457428:- FRAMESHIFT NA TCGA-97-A4M3-01A-11R-A24X-07 RMDN2-DRG1 1 15 chr2:37929729:+ chr22:31426615:+ INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 WNT7B-DGCR8 3 4 chr22:45949924:- chr22:20106177:+ INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 TBCD-RPTOR 3 3 chr17:82797802:+ chr17:80957624:+ INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 STAU2-PDE7A 2 4 chr8:73552012:- chr8:65782843:- INFRAME NA TCGA-97-A4M3-01A-11R-A24X-07 GATAD2B-ASH1L 1 6 chr1:153922733:- chr1:155380116:- . NA TCGA-97-A4M3-01A-11R-A24X-07 LMX1A-LELP1 1 4 chr1:165353076:- chr1:153204687:+ . NA TCGA-97-A4M5-01A-11R-A24X-07 KCNQ1-AMPD3 3 18 chr11:2662081:+ chr11:10357275:+ . NA TCGA-97-A4M6-01A-11R-A24X-07 NUP58-CCDC169 1 8 chr13:25337034:+ chr13:36283702:- INFRAME NA TCGA-97-A4M7-01A-11R-A24X-07 MPG-SNRNP25 32 116 chr16:83256:+ chr16:57086:+ FRAMESHIFT NA TCGA-99-7458-01A-11R-2039-07 HMBS-FOXR1 8 39 chr11:119085066:+ chr11:118978782:+ FRAMESHIFT NA TCGA-99-7458-01A-11R-2039-07 SH3BGRL2-ADGRB3 1 2 chr6:79631506:+ chr6:68956024:+ FRAMESHIFT NA TCGA-99-8025-01A-11R-2241-07 SFTPB-USP39 12 39 chr2:85663346:- chr2:85640976:+ INFRAME NA TCGA-99-8025-01A-11R-2241-07 KDM2A-PACS1 6 16 chr11:67121358:+ chr11:66193486:+ FRAMESHIFT NA TCGA-99-8025-01A-11R-2241-07 PLEC-HAX1 1 5 chr8:143937165:- chr1:154274950:+ INFRAME NA TCGA-99-8032-01A-11R-2241-07 PLS1-TEX264 2 14 chr3:142596509:+ chr3:51703724:+ . NA TCGA-99-8032-01A-11R-2241-07 PBRM1-IGSF11 2 9 chr3:52678500:- chr3:118928716:- FRAMESHIFT Likely Oncogenic NA TCGA-99-8032-01A-11R-2241-07 TMEM39A-BBX 2 5 chr3:119461962:- chr3:107732956:+ FRAMESHIFT NA TCGA-99-8033-01A-11R-2241-07 ACAP3-TMEM240 9 34 chr1:1292419:- chr1:1539787:- . NA TCGA-99-8033-01A-11R-2241-07 TNRC6B-STK11 4 14 chr22:40301333:+ chr19:1222985:+ FRAMESHIFT Likely Oncogenic NA TCGA-99-8033-01A-11R-2241-07 MVK-SEC1P 3 16 chr12:109574900:+ chr19:48680025:+ . NA TCGA-99-AA5R-01A-11R-A39D-07 GPI-DLGAP2 3 33 chr19:34368702:+ chr8:907912:+ INFRAME NA TCGA-99-AA5R-01A-11R-A39D-07 SREBF2-EFCAB6 2 7 chr22:41880992:+ chr22:43555096:- FRAMESHIFT NA TCGA-99-AA5R-01A-11R-A39D-07 COL14A1-SREBF2 2 6 chr8:120228769:+ chr22:41875337:+ FRAMESHIFT NA TCGA-J2-8192-01A-11R-2241-07 NAPSA-COL1A2 1 2 chr19:50361969:- chr7:94420541:+ FRAMESHIFT NA TCGA-J2-8194-01A-11R-2241-07 AGPAT3-APP 1 1 chr21:43904019:+ chr21:25911962:- . NA TCGA-J2-A4AD-01A-11R-A24H-07 CAPRIN1-TRIM44 5 2 chr11:34052636:+ chr11:35806358:+ FRAMESHIFT NA TCGA-J2-A4AD-01A-11R-A24H-07 SEMA4B-CERS3 1 15 chr15:90201735:+ chr15:100402865:- FRAMESHIFT NA TCGA-J2-A4AD-01A-11R-A24H-07 DNAH14-EPHX1 2 7 chr1:224929835:+ chr1:225828725:+ . NA TCGA-J2-A4AD-01A-11R-A24H-07 EPHA10-COL8A2 2 7 chr1:37727102:- chr1:36115752:- . NA TCGA-J2-A4AE-01A-21R-A24H-07 TSNARE1-COL22A1 2 18 chr8:142284413:- chr8:138821411:- FRAMESHIFT NA TCGA-J2-A4AG-01A-11R-A24H-07 CREBBP-LUC7L 3 2 chr16:3778011:- chr16:193015:- FRAMESHIFT Likely Oncogenic NA TCGA-L4-A4E5-01A-11R-A24X-07 USB1-DRC7 27 102 chr16:58002645:+ chr16:57727299:+ FRAMESHIFT NA TCGA-L4-A4E6-01A-11R-A24H-07 SFTPB-IGHA1 1 11 chr2:85662029:- chr14:105708144:- FRAMESHIFT NA TCGA-L9-A443-01A-12R-A24H-07 ANKRD40-LRRC6 26 39 chr17:50696940:- chr8:132610261:- INFRAME NA TCGA-L9-A444-01A-21R-A24H-07 TAS2R41-IGHJ4 75 0 chr7:143477984:+ chr14:105864258:- FRAMESHIFT NA TCGA-L9-A444-01A-21R-A24H-07 APH1A-SLAMF1 9 100 chr1:150267075:- chr1:160610798:- INFRAME NA TCGA-L9-A444-01A-21R-A24H-07 MID1-S100A2 2 28 chrX:10833554:- chr1:153563887:- . NA TCGA-L9-A444-01A-21R-A24H-07 BAZ1A-NKX2-1 2 8 chr14:34862044:- chr14:36519370:- INFRAME NA TCGA-L9-A5IP-01A-21R-A39D-07 MAST2-NDC1 15 2 chr1:45804072:+ chr1:53772489:- INFRAME NA TCGA-L9-A5IP-01A-21R-A39D-07 PDE4D-RFWD2 3 12 chr5:59768247:- chr1:175947239:- FRAMESHIFT NA TCGA-L9-A5IP-01A-21R-A39D-07 LEPROT-NFIA 1 8 chr1:65425378:+ chr1:61277520:+ FRAMESHIFT NA TCGA-L9-A5IP-01A-21R-A39D-07 AGO3-PIK3CD 1 2 chr1:36014048:+ chr1:9710424:+ . NA TCGA-L9-A743-01A-43R-A39D-07 SEC61A2-IGHJ4 14 0 chr10:12129769:+ chr14:105864252:- . NA TCGA-L9-A7SV-01A-11R-A39D-07 EFHD2-FHAD1 1 8 chr1:15410279:+ chr1:15369370:+ INFRAME NA TCGA-L9-A8F4-01A-11R-A39D-07 GRAMD1A-KRTDAP 3 9 chr19:35009329:+ chr19:35487759:- INFRAME NA TCGA-L9-A8F4-01A-11R-A39D-07 ERLEC1-ACYP2 3 8 chr2:53813073:+ chr2:54050958:+ INFRAME NA TCGA-L9-A8F4-01A-11R-A39D-07 SRPK2-PUS7 1 8 chr7:105388648:- chr7:105508544:- . NA TCGA-L9-A8F4-01A-11R-A39D-07 TBC1D5-SETD5 1 6 chr3:17428450:- chr3:9435728:+ FRAMESHIFT NA TCGA-MN-A4N1-01A-11R-A24X-07 ORAOV1-NARS2 9 38 chr11:69673216:- chr11:78571444:- INFRAME NA TCGA-MN-A4N1-01A-11R-A24X-07 POLD3-TENM4 9 17 chr11:74620089:+ chr11:79070009:- . NA TCGA-MN-A4N1-01A-11R-A24X-07 HLCS-STRA8 1 13 chr21:36896860:- chr7:135240519:+ FRAMESHIFT NA TCGA-MN-A4N1-01A-11R-A24X-07 SRP54-THRSP 1 8 chr14:34983215:+ chr11:78067659:+ . NA TCGA-MN-A4N4-01A-12R-A24X-07 RAB3D-SPC24 14 34 chr19:11335447:- chr19:11131607:- FRAMESHIFT NA TCGA-MN-A4N4-01A-12R-A24X-07 PPP4R1-MTCL1 3 17 chr18:9559419:- chr18:8786055:+ INFRAME NA TCGA-MN-A4N5-01A-11R-A24X-07 SNED1-PPP1R7 39 58 chr2:240999050:+ chr2:241163285:+ INFRAME NA TCGA-MN-A4N5-01A-11R-A24X-07 PHKB-PDE3A 3 11 chr16:47669417:+ chr12:20646490:+ FRAMESHIFT NA TCGA-MN-A4N5-01A-11R-A24X-07 ZNF146-NCAM2 1 19 chr19:36215196:+ chr21:21324383:+ . NA TCGA-MN-A4N5-01A-11R-A24X-07 SLC38A9-KCNIP1 2 11 chr5:55649207:- chr5:170732800:+ FRAMESHIFT NA TCGA-MN-A4N5-01A-11R-A24X-07 AMMECR1-PLA2G12B 1 5 chrX:110264489:- chr10:72942740:- FRAMESHIFT NA TCGA-MP-A4SV-01A-11R-A24X-07 PTK2-ANGPT1 11 45 chr8:141001125:- chr8:107497506:- . NA TCGA-MP-A4SV-01A-11R-A24X-07 CBFA2T2-DOK5 8 8 chr20:33490301:+ chr20:54643458:+ FRAMESHIFT NA TCGA-MP-A4SV-01A-11R-A24X-07 HEBP1-CREBL2 3 7 chr12:13000037:- chr12:12635777:+ INFRAME NA TCGA-MP-A4SV-01A-11R-A24X-07 KREMEN1-ENTHD1 2 5 chr22:29098953:+ chr22:39835958:- INFRAME NA TCGA-MP-A4SV-01A-11R-A24X-07 WFDC3-OSBPL2 1 7 chr20:45758392:- chr20:62259981:+ . NA TCGA-MP-A4SV-01A-11R-A24X-07 TMEM170A-ADAT1 1 6 chr16:75464232:- chr16:75603171:- FRAMESHIFT NA TCGA-MP-A4SW-01A-21R-A24X-07 DDI2-MTOR 4 26 chr1:15617808:+ chr1:11167517:- FRAMESHIFT NA TCGA-MP-A4SW-01A-21R-A24X-07 SART3-CORO1C 3 22 chr12:108560843:- chr12:108647522:- INFRAME NA TCGA-MP-A4SW-01A-21R-A24X-07 SDHB-MST1L 2 11 chr1:17053948:- chr1:16761102:- . NA TCGA-MP-A4SW-01A-21R-A24X-07 CTNNAL1-FAM206A 1 12 chr9:108990726:- chr9:108950507:+ INFRAME NA TCGA-MP-A4SW-01A-21R-A24X-07 PLEKHG5-TNFRSF8 1 11 chr1:6496493:- chr1:12142287:+ FRAMESHIFT NA TCGA-MP-A4SW-01A-21R-A24X-07 SRSF11-LAP3 1 1 chr1:70205780:+ chr4:17588819:+ . NA TCGA-MP-A4T4-01A-11R-A262-07 BLOC1S3-GEMIN7 2 6 chr19:45179942:+ chr19:45090107:+ . NA TCGA-MP-A4T4-01A-11R-A262-07 RANBP10-SLC12A4 1 3 chr16:67744288:- chr16:67952425:- INFRAME NA TCGA-MP-A4T6-01A-32R-A262-07 UBQLN1-KLC2 19 78 chr9:83703522:- chr11:66265964:+ . NA TCGA-MP-A4T6-01A-32R-A262-07 TSKU-SMTN 14 20 chr11:76797893:+ chr22:31103813:+ . NA TCGA-MP-A4T6-01A-32R-A262-07 ARHGAP5-KIAA0391 1 3 chr14:32117287:+ chr14:35273435:+ FRAMESHIFT NA TCGA-MP-A4T7-01A-11R-A24X-07 CRK-MYO1C 7 24 chr17:1423618:- chr17:1472228:- INFRAME NA TCGA-MP-A4T8-01A-11R-A24X-07 COPZ1-HNRNPA1 1 15 chr12:54343316:+ chr12:54283812:+ FRAMESHIFT NA TCGA-MP-A4T8-01A-11R-A24X-07 KHDRBS3-PCAT2 1 7 chr8:135582073:+ chr8:127079133:- . NA TCGA-MP-A4T8-01A-11R-A24X-07 AP2A1-SCAF1 1 5 chr19:49793092:+ chr19:49645021:+ . NA TCGA-MP-A4T8-01A-11R-A24X-07 SPATA6-BEND5 1 1 chr1:48471958:- chr1:48736452:- INFRAME NA TCGA-MP-A4T9-01A-11R-A24X-07 TNRC18-TGS1 1 35 chr7:5370375:- chr8:55813055:+ FRAMESHIFT NA TCGA-MP-A4TA-01A-21R-A24X-07 ABCB8-NOS3 13 112 chr7:151028610:+ chr7:151008930:+ INFRAME NA TCGA-MP-A4TE-01A-22R-A466-07 ELP3-PNOC 16 86 chr8:28107976:+ chr8:28339040:+ INFRAME NA TCGA-MP-A4TE-01A-22R-A466-07 DCLRE1B-DNAJB4 4 14 chr1:113905775:+ chr1:78016014:+ INFRAME NA TCGA-MP-A4TE-01A-22R-A466-07 CALCA-SFTPB 1 9 chr11:14968826:- chr2:85658855:- . NA TCGA-MP-A4TF-01A-11R-A262-07 GPT2-HSD17B2 1 10 chr16:46922416:+ chr16:82070942:+ FRAMESHIFT NA TCGA-MP-A4TI-01A-21R-A24X-07 BRD1-APOL5 5 19 chr22:49794034:- chr22:35729354:+ . NA TCGA-MP-A4TI-01A-21R-A24X-07 NEMF-SOS2 1 9 chr14:49814754:- chr14:50120384:- INFRAME NA TCGA-MP-A4TK-01A-11R-A24X-07 ITGA9-SEC13 75 282 chr3:37750569:+ chr3:10305692:- INFRAME NA TCGA-MP-A4TK-01A-11R-A24X-07 ZNF217-PTGIS 23 141 chr20:53597631:- chr20:49514395:- . NA TCGA-MP-A4TK-01A-11R-A24X-07 TBC1D15-MARS 5 52 chr12:71880607:+ chr12:57487386:+ . NA TCGA-MP-A4TK-01A-11R-A24X-07 PCSK5-OSTF1 3 27 chr9:75891373:+ chr9:75146683:+ FRAMESHIFT NA TCGA-MP-A4TK-01A-11R-A24X-07 CCDC117-OSTF1 3 15 chr22:28773778:+ chr9:75146683:+ FRAMESHIFT NA TCGA-MP-A4TK-01A-11R-A24X-07 GPBP1-BDNF 1 18 chr5:57236032:+ chr11:27658585:- FRAMESHIFT NA TCGA-MP-A4TK-01A-11R-A24X-07 MKL1-SCGB1C2 3 4 chr22:40463221:- chr17:138910:+ FRAMESHIFT NA TCGA-MP-A4TK-01A-11R-A24X-07 NR2C2-KIF15 1 8 chr3:14962492:+ chr3:44873329:+ . NA TCGA-MP-A4TK-01A-11R-A24X-07 TGFBR2-NR2C2 1 6 chr3:30606977:+ chr3:15013589:+ FRAMESHIFT Likely Oncogenic NA TCGA-MP-A5C7-01A-11R-A262-07 KRI1-CCDC151 11 131 chr19:10559359:- chr19:11424029:- INFRAME NA TCGA-MP-A5C7-01A-11R-A262-07 KSR1-EFCAB5 3 20 chr17:27560456:+ chr17:29968791:+ . NA TCGA-MP-A5C7-01A-11R-A262-07 MCCC1-MCF2L2 3 13 chr3:183033991:- chr3:183231212:- . NA TCGA-MP-A5C7-01A-11R-A262-07 TMEM241-SNX29 1 4 chr18:23399566:- chr16:12398446:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 STK11-ARHGAP45 18 43 chr19:1222006:+ chr19:1080255:+ INFRAME Likely Oncogenic NA TCGA-NJ-A4YF-01A-12R-A262-07 ZNF490-PRDX2 5 49 chr19:12609158:- chr19:12797166:- FRAMESHIFT NA TCGA-NJ-A4YF-01A-12R-A262-07 C16orf52-OTOA 8 12 chr16:22008407:+ chr16:21740721:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 SMG1P3-STX4 3 23 chr16:21484372:- chr16:31037926:+ . NA TCGA-NJ-A4YF-01A-12R-A262-07 POLR3E-C16orf52 1 18 chr16:22318946:+ chr16:22075487:+ FRAMESHIFT NA TCGA-NJ-A4YF-01A-12R-A262-07 CEMIP-ARNT2 2 11 chr15:80922137:+ chr15:80450880:+ FRAMESHIFT NA TCGA-NJ-A4YF-01A-12R-A262-07 CTNNA1-PLEKHG4B 1 9 chr5:138827718:+ chr5:113251:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 FAAH-RAD54L 2 5 chr1:46406368:+ chr1:46267459:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 LPCAT3-LRRC23 1 9 chr12:7018274:- chr12:6882196:+ . NA TCGA-NJ-A4YF-01A-12R-A262-07 LPCAT3-RPL13P5 1 9 chr12:7018274:- chr12:6882196:+ . NA TCGA-NJ-A4YF-01A-12R-A262-07 PPP1R3F-CCDC120 1 9 chrX:49282063:+ chrX:49063861:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 KIF1A-C2orf54 2 4 chr2:240742929:- chr2:240891763:- INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 PPM1B-ABCG8 2 4 chr2:44218537:+ chr2:43844507:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 RANBP17-GABRP 1 7 chr5:170881896:+ chr5:170811956:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 UBE2E3-WDR70 1 6 chr2:180984093:+ chr5:37697655:+ FRAMESHIFT NA TCGA-NJ-A4YF-01A-12R-A262-07 DHCR24-TADA2B 1 5 chr1:54865303:- chr4:7054062:+ INFRAME NA TCGA-NJ-A4YF-01A-12R-A262-07 PLCG2-WWOX 1 4 chr16:81870935:+ chr16:79211608:+ INFRAME NA TCGA-NJ-A4YP-01A-11R-A262-07 SPIRE2-CDK10 4 16 chr16:89818538:+ chr16:89682314:+ . NA TCGA-NJ-A4YQ-01A-11R-A262-07 VPS50-PPP6R3 1 6 chr7:93297243:+ chr11:68544838:+ INFRAME NA TCGA-NJ-A4YQ-01A-11R-A262-07 PLAUR-ZNF576 1 4 chr19:43665316:- chr19:43598831:+ INFRAME NA TCGA-NJ-A55A-01A-11R-A262-07 MOK-CINP 1 4 chr14:102304962:- chr14:102359587:- INFRAME NA TCGA-NJ-A55O-01A-11R-A262-07 TSPAN3-CHRNA3 5 51 chr15:77046789:- chr15:78602264:- . NA TCGA-NJ-A55O-01A-11R-A262-07 PEAK1-DNM1P46 1 5 chr15:77158503:- chr15:99792899:- . NA TCGA-O1-A52J-01A-11R-A262-07 IFNAR1-DCLRE1C 4 51 chr21:33341174:+ chr10:14909330:- INFRAME NA TCGA-O1-A52J-01A-11R-A262-07 ITSN1-NEBL 4 44 chr21:33642713:+ chr10:20850502:- . NA TCGA-O1-A52J-01A-11R-A262-07 RUNX1-CEP76 5 17 chr21:34834410:- chr18:12686450:- FRAMESHIFT Likely Oncogenic NA TCGA-O1-A52J-01A-11R-A262-07 MLLT10-KCNJ6 2 20 chr10:21538912:+ chr21:37715131:- FRAMESHIFT NA TCGA-O1-A52J-01A-11R-A262-07 ASPH-OR13Z2P 4 5 chr8:61633683:- chr1:147445761:+ . NA TCGA-O1-A52J-01A-11R-A262-07 MTCL1-CCT8 1 16 chr18:8720496:+ chr21:29065105:- INFRAME NA TCGA-O1-A52J-01A-11R-A262-07 GAS6-GPC5 1 6 chr13:113863575:- chr13:92866282:+ FRAMESHIFT NA TCGA-O1-A52J-01A-11R-A262-07 AFG3L2-TIAM1 1 3 chr18:12337341:- chr21:31130948:- FRAMESHIFT NA TCGA-S2-AA1A-01A-12R-A39D-07 MKL2-GID4 1 6 chr16:14218998:+ chr17:18065180:+ FRAMESHIFT NA TCGA-18-3406-01A-01R-0980-07 NOL12-GGA1 2 6 chr22:37686475:+ chr22:37629998:+ FRAMESHIFT NA TCGA-18-3410-01A-01R-0980-07 NUMA1-ABHD12 8 73 chr11:72069842:- chr20:25323430:- . NA TCGA-18-3411-01A-01R-0980-07 EFHC1-MAPK14 4 6 chr6:52362249:+ chr6:36102571:+ . NA TCGA-18-3411-01A-01R-0980-07 PAQR8-MAPK14 4 6 chr6:52362249:+ chr6:36102571:+ . NA TCGA-18-3411-01A-01R-0980-07 DDHD1-PLEKHG3 1 6 chr14:53072597:- chr14:64736853:+ FRAMESHIFT NA TCGA-18-3411-01A-01R-0980-07 MARK3-ENTPD5 1 2 chr14:103480490:+ chr14:74015930:- . NA TCGA-18-3412-01A-01R-0980-07 GAN-GRM7 1 4 chr16:81315280:+ chr3:7146452:+ INFRAME NA TCGA-18-3414-01A-01R-0980-07 MRPL35-CTNNA2 33 257 chr2:86207327:+ chr2:80544982:+ INFRAME NA TCGA-18-3414-01A-01R-0980-07 KITLG-TNNC1 2 6 chr12:88580264:- chr3:52452513:- INFRAME NA TCGA-18-3414-01A-01R-0980-07 NAA15-MGST2 1 3 chr4:139344339:+ chr4:139678543:+ INFRAME NA TCGA-18-3415-01A-01R-0980-07 NFE2L2-ZC3H13 172 611 chr2:177264532:- chr13:45980004:- FRAMESHIFT NA TCGA-18-3415-01A-01R-0980-07 HOOK2-RTBDN 89 541 chr19:12774669:- chr19:12826871:- FRAMESHIFT NA TCGA-18-3415-01A-01R-0980-07 UBQLN1-MIR4435-2HG 11 61 chr9:83707500:- chr2:111429620:- . NA TCGA-18-3415-01A-01R-0980-07 C6orf62-FAM65B 12 42 chr6:24716148:- chr6:24818625:- INFRAME NA TCGA-18-3415-01A-01R-0980-07 MIR4435-2HG-TXNL4A 6 23 chr2:111494885:- chr18:79977701:- . NA TCGA-18-3415-01A-01R-0980-07 LAMTOR4-AP4M1 4 17 chr7:100149579:+ chr7:100101708:+ . NA TCGA-18-3415-01A-01R-0980-07 SENP5-PAK2 2 18 chr3:196886694:+ chr3:196827196:+ FRAMESHIFT NA TCGA-18-3415-01A-01R-0980-07 ZC3H13-NFE2L2 2 7 chr13:45979813:- chr2:177283804:- . NA TCGA-18-3415-01A-01R-0980-07 RNF167-PLD2 1 4 chr17:4942941:+ chr17:4817146:+ INFRAME NA TCGA-18-3415-01A-01R-0980-07 DHX34-C5AR1 1 1 chr19:47349352:+ chr19:47291978:+ . NA TCGA-18-3416-01A-01R-0980-07 PLS1-TFDP2 5 38 chr3:142596509:+ chr3:141963963:- . NA TCGA-18-3416-01A-01R-0980-07 GOLPH3-LRTM1 2 3 chr5:32135572:- chr3:54918892:- INFRAME NA TCGA-18-3417-01A-01R-1443-07 IGKV2D-26-IGKJ5 66 13 chr2:89986701:+ chr2:88860600:- INFRAME NA TCGA-18-3417-01A-01R-1443-07 DCAF8-NME7 17 95 chr1:160261285:- chr1:169310080:- . NA TCGA-18-3421-01A-01R-0980-07 RPL24-SLC9A9 1 57 chr3:101682429:- chr3:143495448:- INFRAME NA TCGA-18-3421-01A-01R-0980-07 NXF1-WDR74 3 26 chr11:62805329:- chr11:62839659:- . NA TCGA-18-3421-01A-01R-0980-07 TNS1-FAP 5 8 chr2:217978765:- chr2:162243500:- . NA TCGA-18-3421-01A-01R-0980-07 RABEPK-PIK3R1 4 3 chr9:125207721:+ chr5:68273390:+ INFRAME Likely Oncogenic NA TCGA-18-3421-01A-01R-0980-07 MRPS35-PPFIBP1 3 6 chr12:27737608:+ chr12:27687385:+ INFRAME NA TCGA-18-3421-01A-01R-0980-07 MAPK10-UGT8 1 9 chr4:86453030:- chr4:114622879:+ . NA TCGA-18-3421-01A-01R-0980-07 CPQ-COL14A1 2 3 chr8:96645402:+ chr8:120367171:+ . NA TCGA-18-3421-01A-01R-0980-07 CLDN12-STEAP1 1 5 chr7:90494430:+ chr7:90159758:+ . NA TCGA-18-3421-01A-01R-0980-07 TTC39C-DIRC2 1 4 chr18:24069271:+ chr3:122872415:+ INFRAME NA TCGA-18-3421-01A-01R-0980-07 VPS18-ZFYVE19 1 3 chr15:40896079:+ chr15:40814148:+ INFRAME NA TCGA-18-4083-01A-01R-1100-07 BRAP-FAM216A 49 268 chr12:111665639:- chr12:110490019:+ FRAMESHIFT NA TCGA-18-4083-01A-01R-1100-07 GPN3-MIR99AHG 2 21 chr12:110468156:- chr21:16391614:+ . NA TCGA-18-4083-01A-01R-1100-07 ARID1A-NIPBL 1 11 chr1:26775707:+ chr5:36995622:+ FRAMESHIFT Likely Oncogenic NA TCGA-18-4083-01A-01R-1100-07 OAS2-HECTD4 1 4 chr12:112978785:+ chr12:112319742:- INFRAME NA TCGA-18-4083-01A-01R-1100-07 PELP1-CHRNE 1 2 chr17:4703863:- chr17:4902763:- FRAMESHIFT NA TCGA-18-4721-01A-01R-1443-07 ITFG2-TULP3 9 28 chr12:2812856:+ chr12:2937631:+ INFRAME NA TCGA-18-4721-01A-01R-1443-07 ACIN1-HAUS4 6 36 chr14:23078151:- chr14:22955176:- . NA TCGA-18-4721-01A-01R-1443-07 NFX1-ACO1 3 8 chr9:33351790:+ chr9:32440465:+ INFRAME NA TCGA-21-1071-01A-01R-0692-07 SENP2-ANKRD27 7 15 chr3:185586514:+ chr19:32642145:- INFRAME NA TCGA-21-1071-01A-01R-0692-07 AP2A2-EPS8L2 3 16 chr11:994245:+ chr11:720062:+ INFRAME NA TCGA-21-1071-01A-01R-0692-07 KLHL24-CEP89 3 16 chr3:183651276:+ chr19:32901412:- INFRAME NA TCGA-21-1071-01A-01R-0692-07 FBXW2-MEGF9 3 15 chr9:120771348:- chr9:120659575:- FRAMESHIFT NA TCGA-21-1071-01A-01R-0692-07 SLC47A2-FADS2 3 6 chr17:19702605:- chr11:61857011:+ INFRAME NA TCGA-21-1071-01A-01R-0692-07 YEATS2-LIPH 1 9 chr3:183697993:+ chr3:185535132:- . NA TCGA-21-1079-01A-01R-0692-07 ARL15-MOCS2 1 6 chr5:54307888:- chr5:53108643:- . NA TCGA-21-1080-01A-01R-0692-07 RNF19A-PRSS3 96 212 chr8:100309867:- chr9:33796643:+ . NA TCGA-21-1080-01A-01R-0692-07 DNAJC2-SLC26A5 20 73 chr7:103337736:- chr7:103389114:- FRAMESHIFT NA TCGA-21-1081-01A-01R-0692-07 SLC22A23-TRAF3 12 39 chr6:3410188:- chr14:102870185:+ . NA TCGA-21-1081-01A-01R-0692-07 PI4KA-RREB1 12 36 chr22:20834562:- chr6:7210804:+ FRAMESHIFT NA TCGA-21-1081-01A-01R-0692-07 CXADR-FAM184B 1 3 chr21:17565611:+ chr4:17664659:- INFRAME NA TCGA-21-1082-01A-01R-0692-07 FAM193A-TNIP2 13 68 chr4:2700544:+ chr4:2747945:- FRAMESHIFT NA TCGA-21-1082-01A-01R-0692-07 TRIM28-ZBTB45 9 44 chr19:58545097:+ chr19:58517673:- FRAMESHIFT NA TCGA-21-1082-01A-01R-0692-07 CTSB-DEFB136 4 33 chr8:11849046:- chr8:11974118:- FRAMESHIFT NA TCGA-21-1082-01A-01R-0692-07 ACVR2A-CASP8 3 25 chr2:147917426:+ chr2:201266461:+ FRAMESHIFT Likely Oncogenic NA TCGA-21-5782-01A-01R-1635-07 ADAMTS12-FBXO38 2 1 chr5:33751404:- chr5:148433424:+ INFRAME NA TCGA-21-5783-01A-41R-2187-07 GALNT7-SAP30 12 38 chr4:173168961:+ chr4:173373390:+ INFRAME NA TCGA-21-5783-01A-41R-2187-07 ZC3H15-FAM171B 1 3 chr2:186501425:+ chr2:186740228:+ INFRAME NA TCGA-21-5783-01A-41R-2187-07 TBCK-PAPSS1 1 2 chr4:106171095:- chr4:107631860:- INFRAME NA TCGA-21-5786-01A-01R-1635-07 TMEM127-ZAP70 4 16 chr2:96253850:- chr2:97732883:+ FRAMESHIFT NA TCGA-21-5787-01A-01R-1635-07 DPY19L1-CDKAL1 5 22 chr7:34989884:- chr6:21198021:+ INFRAME NA TCGA-21-5787-01A-01R-1635-07 UBE2E2-TOGARAM1 6 9 chr3:23217312:+ chr14:45043686:+ INFRAME NA TCGA-22-0940-01A-01R-0692-07 TRGV2-TRGJP2 3 6 chr7:38362875:- chr7:38256387:- FRAMESHIFT NA TCGA-22-0940-01A-01R-0692-07 HACD3-RAB11A 1 13 chr15:65530718:+ chr15:65850864:+ . NA TCGA-22-0940-01A-01R-0692-07 CERS6-G6PC2 2 7 chr2:168717978:+ chr2:168907568:+ INFRAME NA TCGA-22-0940-01A-01R-0692-07 PDE4D-MCTP1 1 8 chr5:59586329:- chr5:95017484:- FRAMESHIFT NA TCGA-22-0940-01A-01R-0692-07 CCNY-GJD4 1 6 chr10:35337207:+ chr10:35607578:+ INFRAME NA TCGA-22-0940-01A-01R-0692-07 VTI1A-TCF7L2 2 0 chr10:112538330:+ chr10:113040025:+ FRAMESHIFT Likely Oncogenic NA TCGA-22-0944-01A-01R-0692-07 FBXL20-ORMDL3 55 290 chr17:39401361:- chr17:39924225:- . NA TCGA-22-0944-01A-01R-0692-07 ERBB2-PPP1R1B 6 10 chr17:39719834:+ chr17:39635816:+ FRAMESHIFT NA TCGA-22-0944-01A-01R-0692-07 FBXL20-GSDMB 3 19 chr17:39401361:- chr17:39912497:- FRAMESHIFT NA TCGA-22-0944-01A-01R-0692-07 UBE2O-PRPSAP1 3 4 chr17:76452725:- chr17:76313891:- FRAMESHIFT NA TCGA-22-1002-01A-01R-0692-07 ZNF814-ZNF787 1 7 chr19:57888767:- chr19:56089092:- INFRAME NA TCGA-22-1005-01A-01R-0692-07 ACTN4-CATSPERG 2 46 chr19:38709476:+ chr19:38358278:+ INFRAME NA TCGA-22-1012-01A-01R-0692-07 NEDD9-ERVFRD-1 6 29 chr6:11232504:- chr6:11105630:- . NA TCGA-22-1012-01A-01R-0692-07 NEURL1-PDCD11 3 9 chr10:103494472:+ chr10:103405985:+ FRAMESHIFT NA TCGA-22-1012-01A-01R-0692-07 LARP4B-SMCO3 1 9 chr10:836403:- chr12:14806696:- . NA TCGA-22-1012-01A-01R-0692-07 ARFGEF3-XPO5 1 3 chr6:138170713:+ chr6:43534007:- INFRAME NA TCGA-22-1016-01A-01R-0692-07 SLC12A8-BCAS1 9 21 chr3:125135669:- chr20:53975430:- FRAMESHIFT NA TCGA-22-1016-01A-01R-0692-07 PLEKHG4B-AHRR 2 20 chr5:144920:+ chr5:343893:+ FRAMESHIFT NA TCGA-22-1016-01A-01R-0692-07 PLEKHG4B-PDCD6 2 20 chr5:144920:+ chr5:343893:+ FRAMESHIFT NA TCGA-22-1016-01A-01R-0692-07 NOP58-BMPR2 2 13 chr2:202287724:+ chr2:202464809:+ INFRAME NA TCGA-22-1016-01A-01R-0692-07 CCDC61-PPP5C 1 11 chr19:46003501:+ chr19:46383411:+ INFRAME NA TCGA-22-1016-01A-01R-0692-07 NFX1-UBE2R2 3 3 chr9:33313793:+ chr9:33900174:+ FRAMESHIFT NA TCGA-22-1016-01A-01R-0692-07 CMBL-DARS2 1 3 chr5:10307625:- chr1:173850327:+ . NA TCGA-22-4591-01A-01R-1201-07 TM7SF3-INTS13 7 66 chr12:27014078:- chr12:26914001:- INFRAME NA TCGA-22-4591-01A-01R-1201-07 MDH2-STYXL1 7 63 chr7:76048226:+ chr7:76030527:- . NA TCGA-22-4591-01A-01R-1201-07 METTL22-PMM2 3 20 chr16:8635312:+ chr16:8847724:+ FRAMESHIFT NA TCGA-22-4591-01A-01R-1201-07 SPATA18-EXOC1 4 5 chr4:52051791:+ chr4:55902344:+ INFRAME NA TCGA-22-4591-01A-01R-1201-07 XXYLT1-TPRG1 3 4 chr3:195156449:- chr3:189310386:+ INFRAME NA TCGA-22-4591-01A-01R-1201-07 MPDZ-ZPBP 1 6 chr9:13150511:- chr7:49983519:- INFRAME NA TCGA-22-4593-01A-21R-1820-07 IPO7-WEE1 23 40 chr11:9384847:+ chr11:9575888:+ INFRAME NA TCGA-22-4593-01A-21R-1820-07 GAPDH-COL3A1 1 20 chr12:6537996:+ chr2:188997700:+ FRAMESHIFT NA TCGA-22-4593-01A-21R-1820-07 PPP2R5E-PLEKHH1 2 15 chr14:63453689:- chr14:67541834:+ . NA TCGA-22-4593-01A-21R-1820-07 RBM25-VRTN 1 7 chr14:73058705:+ chr14:74337723:+ . NA TCGA-22-4593-01A-21R-1820-07 UBE4B-KIF1B 1 3 chr1:10095596:+ chr1:10232250:+ . NA TCGA-22-4594-01A-01R-1201-07 SAMD12-RTN1 23 175 chr8:118621804:- chr14:59607492:- INFRAME NA TCGA-22-4594-01A-01R-1201-07 EPG5-ST8SIA5 2 15 chr18:45967177:- chr18:46704664:- FRAMESHIFT NA TCGA-22-4594-01A-01R-1201-07 RNF165-ZBTB7C 1 6 chr18:46326947:+ chr18:48185995:- . NA TCGA-22-4594-01A-01R-1201-07 SEC14L2-HORMAD2 1 3 chr22:30416087:+ chr22:30176063:+ FRAMESHIFT NA TCGA-22-4595-01A-01R-1201-07 NIPBL-FGF10 16 86 chr5:36962274:+ chr5:44310530:- INFRAME NA TCGA-22-4595-01A-01R-1201-07 CCDC91-PDZRN4 2 11 chr12:28484165:+ chr12:41506456:+ INFRAME NA TCGA-22-4601-01A-01R-1443-07 RABGGTB-FOXJ3 6 10 chr1:75786274:+ chr1:42182024:- FRAMESHIFT NA TCGA-22-4601-01A-01R-1443-07 ACADM-FOXJ3 6 6 chr1:75786274:+ chr1:42182024:- . NA TCGA-22-4601-01A-01R-1443-07 PATJ-PRSS50 1 6 chr1:61927829:+ chr3:46720003:- . NA TCGA-22-4601-01A-01R-1443-07 PATJ-PRSS46 1 4 chr1:61927829:+ chr3:46720003:- INFRAME NA TCGA-22-4604-01A-01R-1201-07 NFX1-TMEM8B 4 8 chr9:33354892:+ chr9:35845975:+ FRAMESHIFT NA TCGA-22-4604-01A-01R-1201-07 SLC9A9-KCNAB1 3 7 chr3:143795001:- chr3:156421616:+ INFRAME NA TCGA-22-4604-01A-01R-1201-07 ADAMTSL2-MAPKAP1 1 11 chr9:133541001:+ chr9:125506417:- INFRAME NA TCGA-22-4605-01A-21R-2125-07 FBXO32-ANXA13 1 2 chr8:123540899:- chr8:123702736:- FRAMESHIFT NA TCGA-22-4607-01A-01R-1201-07 SPDYA-BRE 5 30 chr2:28783978:+ chr2:28237202:+ . NA TCGA-22-4607-01A-01R-1201-07 F11R-NR1I3 2 5 chr1:161021010:- chr1:161232946:- INFRAME NA TCGA-22-4607-01A-01R-1201-07 MRPS7-SLC16A5 1 7 chr17:75263507:+ chr17:75100007:+ FRAMESHIFT NA TCGA-22-4609-01A-21R-2125-07 SHB-PAX5 29 154 chr9:38016011:- chr9:37020801:- INFRAME NA TCGA-22-4609-01A-21R-2125-07 RNF38-SPINK4 8 21 chr9:36424613:- chr9:33245112:+ . NA TCGA-22-4613-01A-01R-1443-07 SPOP-SLC35B1 6 29 chr17:49607250:- chr17:49704226:- INFRAME Likely Oncogenic NA TCGA-22-4613-01A-01R-1443-07 PLAA-LINGO2 2 16 chr9:26935013:- chr9:27950706:- . NA TCGA-22-4613-01A-01R-1443-07 TXNRD1-UGT2B27P 2 13 chr12:104315896:+ chr4:69005135:- . NA TCGA-22-4613-01A-01R-1443-07 THOC5-SPATA16 3 4 chr22:29539330:- chr3:173019575:- INFRAME NA TCGA-22-5471-01A-01R-1635-07 LSM14A-URI1 2 9 chr19:34172763:+ chr19:29971193:+ FRAMESHIFT NA TCGA-22-5471-01A-01R-1635-07 DNAJC13-UBA5 2 3 chr3:132496663:+ chr3:132668818:+ FRAMESHIFT NA TCGA-22-5474-01A-01R-1635-07 TFRC-CPA3 15 64 chr3:196060180:- chr3:148896520:+ FRAMESHIFT NA TCGA-22-5474-01A-01R-1635-07 PVT1-EXT1 5 49 chr8:127794734:+ chr8:117837201:- . NA TCGA-22-5474-01A-01R-1635-07 PIKFYVE-ZNF124 4 11 chr2:208277708:+ chr1:247159813:- FRAMESHIFT NA TCGA-22-5474-01A-01R-1635-07 PIKFYVE-NHEJ1 3 5 chr2:208277708:+ chr2:219095355:- FRAMESHIFT NA TCGA-22-5474-01A-01R-1635-07 NHEJ1-ZNF124 2 5 chr2:219095274:- chr1:247159813:- FRAMESHIFT NA TCGA-22-5474-01A-01R-1635-07 COBLL1-SMYD3 2 3 chr2:164841156:- chr1:245929937:- FRAMESHIFT NA TCGA-22-5477-01A-01R-1635-07 MYBBP1A-ANKFY1 161 544 chr17:4553810:- chr17:4164173:- . NA TCGA-22-5477-01A-01R-1635-07 ITCH-HM13 12 22 chr20:34477812:+ chr20:31538241:+ INFRAME NA TCGA-22-5477-01A-01R-1635-07 ITPR1-SUMF1 3 7 chr3:4494506:+ chr3:4068745:- . NA TCGA-22-5478-01A-01R-1635-07 ZNF8-SSBP4 56 261 chr19:58279147:+ chr19:18427351:+ FRAMESHIFT NA TCGA-22-5478-01A-01R-1635-07 GATAD2A-RPL28 3 25 chr19:19406019:+ chr19:55386350:+ . NA TCGA-22-5478-01A-01R-1635-07 CLOCK-SRD5A3 3 14 chr4:55442432:- chr4:55359346:+ INFRAME NA TCGA-22-5478-01A-01R-1635-07 CRTC1-LYPD4 1 16 chr19:18749875:+ chr19:41839024:- INFRAME NA TCGA-22-5478-01A-01R-1635-07 RBM33-CDK14 3 7 chr7:155774647:+ chr7:90984148:+ INFRAME NA TCGA-22-5479-01A-31R-1949-07 AHCTF1-TFB2M 3 7 chr1:246842694:- chr1:246566059:- FRAMESHIFT NA TCGA-22-5479-01A-31R-1949-07 ACAP2-XXYLT1 2 8 chr3:195381009:- chr3:195070111:- FRAMESHIFT NA TCGA-22-5479-01A-31R-1949-07 MZF1-CCDC105 1 8 chr19:58569277:- chr19:15020461:+ FRAMESHIFT NA TCGA-22-5480-01A-01R-1635-07 BAG4-FGFR1 8 58 chr8:38192795:+ chr8:38426245:- INFRAME Likely Oncogenic NA TCGA-22-5480-01A-01R-1635-07 CUX1-AHCYL2 5 30 chr7:101816093:+ chr7:129379641:+ INFRAME NA TCGA-22-5480-01A-01R-1635-07 STKLD1-DBH 6 26 chr9:133379122:+ chr9:133651634:+ INFRAME NA TCGA-22-5480-01A-01R-1635-07 RASAL2-LIMK2 1 11 chr1:178094694:+ chr22:31278297:+ FRAMESHIFT NA TCGA-22-5480-01A-01R-1635-07 FGFR1-LETM2 1 4 chr8:38467981:- chr8:38387950:+ . Likely Oncogenic NA TCGA-22-5481-01A-31R-1949-07 MANBA-LIMCH1 5 26 chr4:102760718:- chr4:41598920:+ INFRAME NA TCGA-22-5481-01A-31R-1949-07 IGSF11-IGKJ1 9 0 chr3:118928670:- chr2:88861917:- FRAMESHIFT NA TCGA-22-5481-01A-31R-1949-07 MPHOSPH9-CDC6 3 21 chr12:123233075:- chr17:40291469:+ . NA TCGA-22-5481-01A-31R-1949-07 USP32-EPHA1 4 12 chr17:60391882:- chr7:143397657:- INFRAME NA TCGA-22-5482-01A-01R-1635-07 LRP1B-HECW2 2 11 chr2:141810279:- chr2:196343764:- INFRAME NA TCGA-22-5482-01A-01R-1635-07 ABCA13-CAP1 1000 1000 chr7:48219477:+ chr1:40072253:+ . NA TCGA-22-5483-01A-01R-1820-07 ALG1-SEC14L5 2 13 chr16:5075536:+ chr16:5014859:+ INFRAME NA TCGA-22-5483-01A-01R-1820-07 WNK2-SECISBP2 3 4 chr9:93264033:+ chr9:89357411:+ INFRAME NA TCGA-22-5483-01A-01R-1820-07 CCND3-BYSL 1 9 chr6:41940370:- chr6:41927374:+ FRAMESHIFT NA TCGA-22-5483-01A-01R-1820-07 SLC7A1-ARHGAP35 1 6 chr13:29586725:- chr19:46937264:+ . NA TCGA-22-5483-01A-01R-1820-07 ATF3-CDH20 1 3 chr1:212618234:+ chr18:61490402:+ . NA TCGA-22-5485-01A-01R-1635-07 SLCO3A1-BMPR2 13 44 chr15:91854088:+ chr2:202542311:+ FRAMESHIFT NA TCGA-22-5485-01A-01R-1635-07 COBLL1-SCN3A 2 12 chr2:164743687:- chr2:165186747:- . NA TCGA-22-5485-01A-01R-1635-07 TMEM94-NUP85 2 11 chr17:75471929:+ chr17:75208527:+ INFRAME NA TCGA-22-5489-01A-01R-1635-07 CHMP7-IGHJ6 59 1 chr8:23243735:+ chr14:105863240:- . NA TCGA-22-5489-01A-01R-1635-07 ZCCHC7-LRRC19 15 25 chr9:37126942:+ chr9:26995849:- INFRAME NA TCGA-22-5489-01A-01R-1635-07 LRRC19-SNAPC3 6 18 chr9:26996311:- chr9:15453041:+ FRAMESHIFT NA TCGA-22-5489-01A-01R-1635-07 SNAPC3-LRRC19 2 11 chr9:15451402:+ chr9:26999703:- . NA TCGA-22-5489-01A-01R-1635-07 CRYBG3-IL20RB 1 7 chr3:97881219:+ chr3:137010113:+ INFRAME NA TCGA-22-5491-01A-01R-1635-07 TCF7L2-CASC2 6 22 chr10:113040126:+ chr10:118206522:+ . Likely Oncogenic NA TCGA-22-5491-01A-01R-1635-07 LPP-GOLIM4 4 5 chr3:188225527:+ chr3:168048365:- . NA TCGA-22-5491-01A-01R-1635-07 CH17-296N19.1-FKBP5 3 8 chr9:61331052:+ chr6:35642843:- . NA TCGA-22-5491-01A-01R-1635-07 KLHL29-UBXN2A 2 11 chr2:23642850:+ chr2:23958301:+ . NA TCGA-22-5491-01A-01R-1635-07 IL1RAP-TMEM207 1 8 chr3:190609181:+ chr3:190447827:- INFRAME NA TCGA-22-5492-01A-01R-1635-07 ACTR2-TSGA10 17 42 chr2:65227957:+ chr2:99105697:- INFRAME NA TCGA-22-5492-01A-01R-1635-07 SEMA3C-CD36 1 29 chr7:80916679:- chr7:80486467:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 LIMCH1-OCIAD2 47 218 chr4:41360936:+ chr4:48904611:- . NA TCGA-22-A5C4-01A-12R-A27Q-07 BCR-MYH11 31 85 chr22:23295155:+ chr16:15786732:- FRAMESHIFT NA TCGA-22-A5C4-01A-12R-A27Q-07 AAK1-WFDC13 18 57 chr2:69505569:- chr20:45704444:+ INFRAME NA TCGA-22-A5C4-01A-12R-A27Q-07 STIM2-GATAD2A 14 57 chr4:26919634:+ chr19:19465340:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 ACSS1-DBNDD2 10 28 chr20:25057769:- chr20:45408460:+ INFRAME NA TCGA-22-A5C4-01A-12R-A27Q-07 MAGED1-CYP4F2 5 38 chrX:51900296:+ chr19:15892582:- INFRAME NA TCGA-22-A5C4-01A-12R-A27Q-07 PTPRA-SDAD1 8 21 chr20:3038129:+ chr4:75957941:- FRAMESHIFT NA TCGA-22-A5C4-01A-12R-A27Q-07 PLCB1-MCM8 2 38 chr20:8722421:+ chr20:5957126:+ INFRAME NA TCGA-22-A5C4-01A-12R-A27Q-07 MKKS-MMP24 7 10 chr20:10434108:- chr20:35246840:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 CCNY-VWA3B 5 16 chr10:35501535:+ chr2:98290511:+ INFRAME NA TCGA-22-A5C4-01A-12R-A27Q-07 FAHD2B-DROSHA 1 24 chr2:97090109:- chr5:31406945:- FRAMESHIFT NA TCGA-22-A5C4-01A-12R-A27Q-07 STK32B-SMIM14 3 16 chr4:5139960:+ chr4:39605180:- . NA TCGA-22-A5C4-01A-12R-A27Q-07 PLCB1-RBL1 2 17 chr20:8150371:+ chr20:37022826:- INFRAME NA TCGA-22-A5C4-01A-12R-A27Q-07 SCRN1-WIPF3 1 14 chr7:29989642:- chr7:29914493:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 CDK11B-DMD 1 11 chr1:1641662:- chrX:31836819:- FRAMESHIFT NA TCGA-22-A5C4-01A-12R-A27Q-07 CXorf23-POLA1 2 7 chrX:19914152:- chrX:24809898:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 IL17RA-SCARF2 2 5 chr22:17085229:+ chr22:20429833:- FRAMESHIFT NA TCGA-22-A5C4-01A-12R-A27Q-07 YDJC-CLEC16A 1 9 chr22:21629308:- chr16:11060902:+ FRAMESHIFT NA TCGA-22-A5C4-01A-12R-A27Q-07 CASC20-OSER1 1 8 chr20:6473655:+ chr20:44206998:- . NA TCGA-22-A5C4-01A-12R-A27Q-07 FAM227B-FGF7 1 8 chr15:49371302:- chr15:49424032:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 RNF24-MMP24 2 4 chr20:4015437:- chr20:35246840:+ . NA TCGA-22-A5C4-01A-12R-A27Q-07 MACROD2-UBOX5 1 4 chr20:14002404:+ chr20:3123406:- . NA TCGA-33-4532-01A-01R-1201-07 DRG1-MYO18B 57 175 chr22:31403204:+ chr22:25921257:+ INFRAME NA TCGA-33-4532-01A-01R-1201-07 ADAMTS17-CERS3 6 46 chr15:100152612:- chr15:100402865:- INFRAME NA TCGA-33-4532-01A-01R-1201-07 KANSL1-UNC45B 8 22 chr17:46170855:- chr17:35180559:+ INFRAME NA TCGA-33-4532-01A-01R-1201-07 CCDC148-ACTR3 1 16 chr2:158456415:- chr2:113927345:+ INFRAME NA TCGA-33-4533-01A-01R-1201-07 RAI1-IFT20 27 292 chr17:17724159:+ chr17:28331987:- . NA TCGA-33-4533-01A-01R-1201-07 ADCY9-PRKCB 3 24 chr16:4113750:- chr16:23988508:+ INFRAME NA TCGA-33-4538-01A-01R-1201-07 NAALADL2-ABCC5 34 95 chr3:175627386:+ chr3:183925719:- INFRAME NA TCGA-33-4538-01A-01R-1201-07 ADAM23-CERKL 16 71 chr2:206560118:+ chr2:181617421:- . NA TCGA-33-4538-01A-01R-1201-07 CD82-TSPAN18 2 5 chr11:44605429:+ chr11:44764426:+ . NA TCGA-33-4547-01A-01R-1201-07 U2AF2-NLRP9 81 222 chr19:55669692:+ chr19:55709044:- FRAMESHIFT NA TCGA-33-4547-01A-01R-1201-07 NRF1-MTMR1 5 22 chr7:129611824:+ chrX:150750730:+ . NA TCGA-33-4547-01A-01R-1201-07 DEDD2-GSK3A 2 1 chr19:42220074:- chr19:42233383:- . NA TCGA-33-4566-01A-01R-1443-07 SERINC2-ZCCHC17 17 17 chr1:31413304:+ chr1:31363848:+ . NA TCGA-33-4566-01A-01R-1443-07 LITAF-CXCL17 5 11 chr16:11587151:- chr19:42433856:- . NA TCGA-33-4566-01A-01R-1443-07 HN1L-SLC9A3R2 1 3 chr16:1678356:+ chr16:2029582:+ FRAMESHIFT NA TCGA-33-4582-01A-01R-1443-07 TLDC1-CYBA 11 37 chr16:84482592:- chr16:88643571:- INFRAME NA TCGA-33-4582-01A-01R-1443-07 PRKDC-PRIM2 4 39 chr8:47912410:- chr6:57379901:+ INFRAME NA TCGA-33-4582-01A-01R-1443-07 CRYBB2P1-BCR 2 10 chr22:25457401:+ chr22:23253799:+ . NA TCGA-33-4583-01A-01R-1443-07 DNAJC1-SKIDA1 2 7 chr10:21918779:- chr10:21523871:- . NA TCGA-33-4586-01A-01R-1443-07 FRMD8-POLA2 3 13 chr11:65389528:+ chr11:65282479:+ FRAMESHIFT NA TCGA-33-4586-01A-01R-1443-07 PTRH2-RNFT1 2 11 chr17:59707371:- chr17:59958444:- . NA TCGA-33-4587-01A-11R-2125-07 CREBBP-PRSS33 23 150 chr16:3879832:- chr16:2786121:- INFRAME Likely Oncogenic NA TCGA-33-4587-01A-11R-2125-07 MACF1-INPP5B 16 109 chr1:39455097:+ chr1:37887004:- INFRAME NA TCGA-33-4587-01A-11R-2125-07 MACF1-RHBDL2 3 48 chr1:39105717:+ chr1:38919337:- . NA TCGA-33-4587-01A-11R-2125-07 CREBBP-ELOB 5 29 chr16:3879832:- chr16:2777127:- FRAMESHIFT Likely Oncogenic NA TCGA-33-4587-01A-11R-2125-07 CDKAL1-ASH1L 5 20 chr6:20846178:+ chr1:155380116:- INFRAME NA TCGA-33-4587-01A-11R-2125-07 FBXO42-CBARP 6 16 chr1:16255711:- chr19:1231275:- FRAMESHIFT NA TCGA-33-4587-01A-11R-2125-07 IGF2BP3-PRKCA 5 16 chr7:23342064:- chr17:66641355:+ INFRAME NA TCGA-33-4587-01A-11R-2125-07 PRKCA-IGF2BP3 2 17 chr17:66496283:+ chr7:23319254:- INFRAME NA TCGA-33-4587-01A-11R-2125-07 ARRB1-UVRAG 5 3 chr11:75351588:- chr11:75888829:+ FRAMESHIFT NA TCGA-33-6738-01A-11R-1949-07 RAB9A-EGFL6 12 29 chrX:13689288:+ chrX:13617730:+ . NA TCGA-33-6738-01A-11R-1949-07 LSM1-NSD3 5 20 chr8:38176275:- chr8:38338607:- FRAMESHIFT NA TCGA-33-6738-01A-11R-1949-07 ERGIC1-RANBP17 2 6 chr5:172914838:+ chr5:171293883:+ INFRAME NA TCGA-33-6738-01A-11R-1949-07 RRP1-PDXK 1 6 chr21:43798100:+ chr21:43746079:+ INFRAME NA TCGA-33-A4WN-01A-11R-A262-07 NOTCH2-CWH43 4 9 chr1:119963574:- chr4:49030825:+ INFRAME NA TCGA-33-AAS8-01A-11R-A405-07 TEKT4P2-TMEM211 2 13 chr21:9127489:- chr22:24939451:- . NA TCGA-33-AASB-01A-11R-A405-07 TXNRD1-GLT8D2 183 1387 chr12:104289040:+ chr12:104021491:- . NA TCGA-33-AASB-01A-11R-A405-07 GNL3-MANF 16 93 chr3:52686105:+ chr3:51386208:+ INFRAME NA TCGA-33-AASB-01A-11R-A405-07 NRIP3-ST5 1 3 chr11:9003762:- chr11:8811335:- . NA TCGA-33-AASI-01A-22R-A405-07 TNS4-CCR7 61 222 chr17:40484484:- chr17:40558942:- INFRAME NA TCGA-33-AASJ-01A-11R-A405-07 PLEKHA1-BTBD16 7 77 chr10:122400388:+ chr10:122289909:+ INFRAME NA TCGA-33-AASJ-01A-11R-A405-07 SAMD12-CASC8 9 40 chr8:118379560:- chr8:127290060:- . NA TCGA-33-AASJ-01A-11R-A405-07 SCAP-CASC21 3 5 chr3:47442872:- chr8:127339281:+ . NA TCGA-33-AASJ-01A-11R-A405-07 ATP1B3-GRK7 1 2 chr3:141916020:+ chr3:141816714:+ FRAMESHIFT NA TCGA-33-AASL-01A-11R-A405-07 NCOA4-CD96 15 37 chr10:46030526:- chr3:111364513:+ . NA TCGA-33-AASL-01A-11R-A405-07 XPR1-MR1 3 19 chr1:180632270:+ chr1:181050011:+ FRAMESHIFT NA TCGA-33-AASL-01A-11R-A405-07 PLBD1-RPL30P11 5 10 chr12:14535659:- chr12:14357586:- . NA TCGA-34-2600-01A-01R-0851-07 PSD4-IL1RN 9 20 chr2:113157535:+ chr2:113111116:+ . NA TCGA-34-2608-01A-02R-0851-07 PTPN9-IGKJ2 20 1 chr15:75463462:- chr2:88861556:- . NA TCGA-34-5231-01A-21R-1820-07 PLEKHJ1-LINGO3 8 30 chr19:2235459:- chr19:2290586:- . NA TCGA-34-5232-01A-21R-1820-07 HECTD4-PEBP1 15 77 chr12:112306064:- chr12:118138039:+ INFRAME NA TCGA-34-5232-01A-21R-1820-07 ULK1-FBXW8 8 40 chr12:131919384:+ chr12:117024147:+ INFRAME NA TCGA-34-5232-01A-21R-1820-07 FBRSL1-CKAP4 8 25 chr12:132490861:+ chr12:106276549:- . NA TCGA-34-5232-01A-21R-1820-07 NOC4L-STAB2 7 28 chr12:132148895:+ chr12:103748963:+ INFRAME NA TCGA-34-5232-01A-21R-1820-07 APPL2-CIT 6 28 chr12:105235959:- chr12:119761055:- INFRAME NA TCGA-34-5232-01A-21R-1820-07 ATP2A2-EP400 4 15 chr12:110292124:+ chr12:131979697:+ INFRAME NA TCGA-34-5232-01A-21R-1820-07 CIT-FAM222A 3 14 chr12:119767087:- chr12:109744101:+ . NA TCGA-34-5232-01A-21R-1820-07 B3GALT2-CFH 1 14 chr1:193186019:- chr1:196713735:+ . NA TCGA-34-5232-01A-21R-1820-07 FAM222A-MSI1 3 3 chr12:109714897:+ chr12:120364755:- . NA TCGA-34-5236-01A-21R-1820-07 PANX1-DEUP1 20 77 chr11:94129493:+ chr11:93437543:+ FRAMESHIFT NA TCGA-34-5236-01A-21R-1820-07 NOTCH3-DEFB132 7 50 chr19:15167249:- chr20:259077:+ INFRAME NA TCGA-34-5236-01A-21R-1820-07 ZFHX4-VRK1 7 8 chr8:76708048:+ chr14:96931331:+ INFRAME NA TCGA-34-5236-01A-21R-1820-07 ALDH3A2-SLC47A1 3 12 chr17:19655387:+ chr17:19549635:+ . NA TCGA-34-5236-01A-21R-1820-07 SP3-STK39 2 13 chr2:173913070:- chr2:168182090:- INFRAME NA TCGA-34-5236-01A-21R-1820-07 KPNA4-IFT80 2 6 chr3:160565214:- chr3:160384646:- . NA TCGA-34-5236-01A-21R-1820-07 CCDC148-DAPL1 1 3 chr2:158456415:- chr2:158804282:+ INFRAME NA TCGA-34-5236-01A-21R-1820-07 EPHA4-COL4A3 1 3 chr2:221563731:- chr2:227237968:+ FRAMESHIFT NA TCGA-34-5239-01A-21R-1820-07 PUM1-EIF4G3 2 4 chr1:31059204:- chr1:21002808:- INFRAME NA TCGA-34-5239-01A-21R-1820-07 RANGAP1-FNTA 1 1 chr22:41285363:- chr8:43059092:+ . NA TCGA-34-5240-01A-01R-1443-07 CYP2S1-UPF1 2 4 chr19:41197928:+ chr19:18865289:+ INFRAME NA TCGA-34-5241-01A-01R-1443-07 ITPRIPL1-IL36G 9 115 chr2:96328117:+ chr2:112984840:+ FRAMESHIFT NA TCGA-34-5241-01A-01R-1443-07 ACTN4-APLP1 2 16 chr19:38647907:+ chr19:35869667:+ INFRAME NA TCGA-34-5241-01A-01R-1443-07 ZNF430-GABRB1 3 5 chr19:21034184:+ chr4:47031914:+ FRAMESHIFT NA TCGA-34-5241-01A-01R-1443-07 ACTN4-KIRREL2 1 12 chr19:38647907:+ chr19:35864648:+ INFRAME NA TCGA-34-5241-01A-01R-1443-07 CCDC97-SIPA1L3 2 6 chr19:41310356:+ chr19:38029089:+ . NA TCGA-34-5241-01A-01R-1443-07 ST6GAL1-TBCCD1 1 10 chr3:186963926:+ chr3:186564372:- . NA TCGA-34-5928-01A-11R-1820-07 AKAP11-DGKH 14 39 chr13:42286399:+ chr13:42252409:+ . NA TCGA-34-5928-01A-11R-1820-07 EZH2-AUTS2 3 48 chr7:148846497:- chr7:70762870:+ FRAMESHIFT NA TCGA-34-5928-01A-11R-1820-07 PRRC2A-COL1A1 3 10 chr6:31635174:+ chr17:50189908:- INFRAME NA TCGA-34-5929-01A-11R-1820-07 TTC28-EP300 2 3 chr22:28629552:- chr22:41135813:+ FRAMESHIFT Likely Oncogenic NA TCGA-34-7107-01A-11R-1949-07 TICAM1-NFIX 2 3 chr19:4831614:- chr19:13073047:+ . NA TCGA-34-8454-01A-11R-2326-07 GNB1-CALML6 43 33 chr1:1890820:- chr1:1916441:+ . NA TCGA-34-8456-01A-21R-2326-07 NFIX-DNM2 5 5 chr19:12995864:+ chr19:10786564:+ INFRAME NA TCGA-34-8456-01A-21R-2326-07 TULP3-GGNBP2 3 6 chr12:2934561:+ chr17:36581344:+ INFRAME NA TCGA-34-8456-01A-21R-2326-07 MCCC1-SOX2-OT 1 8 chr3:183094559:- chr3:181056697:+ . NA TCGA-34-8456-01A-21R-2326-07 TTC7B-TUNAR 2 3 chr14:90816175:- chr14:95922781:+ . NA TCGA-34-A5IX-01A-12R-A27Q-07 GALNT18-ST5 5 16 chr11:11621359:- chr11:8750725:- FRAMESHIFT NA TCGA-34-A5IX-01A-12R-A27Q-07 ZNRF3-NF2 3 24 chr22:28987201:+ chr22:29636751:+ INFRAME Likely Oncogenic NA TCGA-34-A5IX-01A-12R-A27Q-07 APTR-GSAP 5 8 chr7:77695896:- chr7:77406105:- . NA TCGA-34-A5IX-01A-12R-A27Q-07 SETD1B-MLXIP 3 15 chr12:121805216:+ chr12:122132292:+ FRAMESHIFT NA TCGA-34-A5IX-01A-12R-A27Q-07 MATR3-PSD2 1 14 chr5:139293805:+ chr5:139809391:+ . NA TCGA-34-A5IX-01A-12R-A27Q-07 NF2-MTMR3 3 6 chr22:29604112:+ chr22:29957036:+ . Likely Oncogenic NA TCGA-34-A5IX-01A-12R-A27Q-07 STX6-TNR 3 4 chr1:181002606:- chr1:175406777:- . NA TCGA-34-A5IX-01A-12R-A27Q-07 PKP4-TANC1 1 9 chr2:158533316:+ chr2:159224232:+ INFRAME NA TCGA-34-A5IX-01A-12R-A27Q-07 QSOX1-LHX4 1000 1000 chr1:180176034:+ chr1:180266393:+ . NA TCGA-37-3783-01A-01R-1201-07 TOMM20-DPT 2 9 chr1:235119818:- chr1:168714346:- FRAMESHIFT NA TCGA-37-3783-01A-01R-1201-07 TFG-TMEM45A 2 7 chr3:100720058:+ chr3:100555209:+ FRAMESHIFT NA TCGA-37-3792-01A-01R-0980-07 RAD51AP1-SLCO1C1 15 125 chr12:4543904:+ chr12:20737107:+ INFRAME NA TCGA-37-3792-01A-01R-0980-07 HGS-GNAO1 1 126 chr17:81687095:+ chr16:56343763:+ FRAMESHIFT NA TCGA-37-3792-01A-01R-0980-07 ARL16-C16orf70 4 25 chr17:81683536:- chr16:67125959:+ INFRAME NA TCGA-37-3792-01A-01R-0980-07 MORC3-FAM3B 1 16 chr21:36372531:+ chr21:41338378:+ FRAMESHIFT NA TCGA-37-3792-01A-01R-0980-07 C16orf70-ARL16 1 11 chr16:67120194:+ chr17:81683126:- INFRAME NA TCGA-37-4129-01A-01R-1100-07 REV3L-GTF2H5 1 14 chr6:111367115:- chr6:158191977:+ FRAMESHIFT NA TCGA-37-4129-01A-01R-1100-07 AIG1-IL20RA 2 2 chr6:143165183:+ chr6:137038131:- . NA TCGA-37-4130-01A-01R-1100-07 UBAP2L-EEFSEC 25 93 chr1:154241565:+ chr3:128408069:+ INFRAME NA TCGA-37-4130-01A-01R-1100-07 PDZD8-PCLAF 6 17 chr10:117374356:- chr15:64381038:- FRAMESHIFT NA TCGA-37-4130-01A-01R-1100-07 GINS1-SYNDIG1 5 13 chr20:25446039:+ chr20:24665346:+ . NA TCGA-37-4130-01A-01R-1100-07 GART-PCP4 1 12 chr21:33511252:- chr21:39928984:+ INFRAME NA TCGA-37-4130-01A-01R-1100-07 PYGL-TRIM9 1 3 chr14:50908271:- chr14:50977353:- INFRAME NA TCGA-37-4132-01A-01R-1100-07 SBF2-PRMT3 14 25 chr11:10294015:- chr11:20452130:+ FRAMESHIFT NA TCGA-37-4132-01A-01R-1100-07 CUX1-EHBP1L1 1 6 chr7:101816093:+ chr11:65584241:+ INFRAME NA TCGA-37-4132-01A-01R-1100-07 STARD9-PDIA3 1 1 chr15:42695880:+ chr15:43753824:+ FRAMESHIFT NA TCGA-37-4135-01A-01R-1100-07 MRPL48-GDPD5 8 51 chr11:73808350:+ chr11:75444495:- FRAMESHIFT NA TCGA-37-4135-01A-01R-1100-07 CP-MRAS 2 24 chr3:149221647:- chr3:138397324:+ FRAMESHIFT NA TCGA-37-4135-01A-01R-1100-07 PIK3C3-TRPC6 5 11 chr18:41993341:+ chr11:101504798:- FRAMESHIFT NA TCGA-37-4135-01A-01R-1100-07 KC6-LAMA3 3 16 chr18:41632000:- chr18:23951684:+ . NA TCGA-37-4135-01A-01R-1100-07 UBE3A-DISC1FP1 1 24 chr15:25370566:- chr11:90852616:+ . NA TCGA-37-5819-01A-01R-1635-07 ZNF33B-CCPG1 10 41 chr10:42631929:- chr15:55378376:- INFRAME NA TCGA-37-5819-01A-01R-1635-07 WASHC2A-LURAP1L 3 9 chr10:50119769:+ chr9:12821386:+ INFRAME NA TCGA-37-5819-01A-01R-1635-07 CDK13-YAE1D1 3 4 chr7:40047877:+ chr7:39570506:+ FRAMESHIFT NA TCGA-37-5819-01A-01R-1635-07 TBC1D12-EXOC6 1 3 chr10:94511654:+ chr10:92893349:+ FRAMESHIFT NA TCGA-37-A5EL-01A-11R-A26W-07 PSMC6-GPR137C 7 47 chr14:52713968:+ chr14:52596917:+ FRAMESHIFT NA TCGA-37-A5EN-01A-21R-A26W-07 PTGFRN-CD2 8 64 chr1:116961668:+ chr1:116754631:+ INFRAME NA TCGA-37-A5EN-01A-21R-A26W-07 TNPO2-HOOK2 3 7 chr19:12711296:- chr19:12774897:- FRAMESHIFT NA TCGA-37-A5EN-01A-21R-A26W-07 ANKRD27-ZNF536 2 9 chr19:32607635:- chr19:30534847:+ FRAMESHIFT NA TCGA-37-A5EN-01A-21R-A26W-07 ZNF571-TSHZ3 2 1 chr19:37586668:- chr19:31279752:- FRAMESHIFT NA TCGA-37-A5EN-01A-21R-A26W-07 ULK1-SFSWAP 1 1 chr12:131914477:+ chr12:131797178:+ INFRAME NA TCGA-39-5011-01A-01R-1443-07 SYPL1-TMEM168 54 289 chr7:106097690:- chr7:112767744:- INFRAME NA TCGA-39-5011-01A-01R-1443-07 ATP6V1F-CPED1 12 161 chr7:128863062:+ chr7:121295440:+ FRAMESHIFT NA TCGA-39-5011-01A-01R-1443-07 HIPK2-GRM8 12 80 chr7:139600417:- chr7:126609498:- FRAMESHIFT NA TCGA-39-5011-01A-01R-1443-07 AKAP9-PPP2R3B 4 31 chr7:91941147:+ chrY:361590:- INFRAME NA TCGA-39-5011-01A-01R-1443-07 FAM60A-COA1 1 30 chr12:31326024:- chr7:43648652:- . NA TCGA-39-5011-01A-01R-1443-07 ZCCHC7-ZBTB7C 1 11 chr9:37126942:+ chr18:48338398:- . NA TCGA-39-5011-01A-01R-1443-07 DAPK2-WDR1 3 1 chr15:63930432:- chr4:10084491:- FRAMESHIFT NA TCGA-39-5011-01A-01R-1443-07 NRCAM-CUX1 1 4 chr7:108312665:- chr7:102277949:+ . NA TCGA-39-5016-01A-01R-1443-07 API5-FOLH1 1000 1000 chr11:43335994:+ chr11:49146945:- FRAMESHIFT NA TCGA-39-5019-01A-01R-1820-07 TFIP11-AMPD1 4 24 chr22:26512099:- chr1:114688741:- . NA TCGA-39-5019-01A-01R-1820-07 ZNF653-NFIC 5 19 chr19:11505488:- chr19:3425106:+ FRAMESHIFT NA TCGA-39-5019-01A-01R-1820-07 FZR1-CNN1 2 25 chr19:3523058:+ chr19:11541076:+ INFRAME NA TCGA-39-5019-01A-01R-1820-07 PQLC2L-CHRD 2 16 chr3:157543509:+ chr3:184388587:+ . NA TCGA-39-5019-01A-01R-1820-07 DHRS1-METTL3 2 14 chr14:24298957:- chr14:21501903:- INFRAME NA TCGA-39-5019-01A-01R-1820-07 LPP-CHRD 1000 1000 chr3:188484704:+ chr3:184382818:+ . NA TCGA-39-5022-01A-21R-1820-07 APTX-SMU1 1 10 chr9:33025000:- chr9:33048258:- . NA TCGA-39-5024-01A-21R-1820-07 PIP5K1A-TNFAIP8L2 3 4 chr1:151199081:+ chr1:151158666:+ . NA TCGA-39-5024-01A-21R-1820-07 PIP5K1A-SCNM1 1 11 chr1:151199081:+ chr1:151166934:+ FRAMESHIFT NA TCGA-39-5024-01A-21R-1820-07 RNF122-IDO2 1 10 chr8:33551044:- chr8:39963608:+ INFRAME NA TCGA-39-5024-01A-21R-1820-07 PRRC2C-NAA25 1 1 chr1:171587751:+ chr12:112033379:- FRAMESHIFT NA TCGA-39-5028-01A-01R-1443-07 ARMC7-HN1 7 26 chr17:75110606:+ chr17:75136250:- INFRAME NA TCGA-39-5028-01A-01R-1443-07 ABCA1-ZBTB6 3 7 chr9:104883039:- chr9:122912081:- . NA TCGA-39-5029-01A-01R-1443-07 GPC4-IGHJ4 25 0 chrX:133414993:- chr14:105864256:- . NA TCGA-39-5029-01A-01R-1443-07 ENAH-AEBP2 3 14 chr1:225652686:- chr12:19462510:+ INFRAME NA TCGA-39-5030-01A-01R-1443-07 TRAF3-BMP3 4 50 chr14:102830472:+ chr4:81045738:+ . NA TCGA-39-5031-01A-01R-1443-07 FNTB-MNAT1 3 6 chr14:65027781:+ chr14:60968229:+ INFRAME NA TCGA-39-5031-01A-01R-1443-07 KDM4C-FGF7 1 4 chr9:6758203:+ chr15:49483151:+ . NA TCGA-39-5034-01A-01R-1443-07 TTLL7-GNG5 8 32 chr1:83998931:- chr1:84501970:- . NA TCGA-39-5034-01A-01R-1443-07 NKX2-1-SLC25A21 6 8 chr14:36518985:- chr14:36683880:- FRAMESHIFT NA TCGA-39-5034-01A-01R-1443-07 AGAP1-AANAT 2 14 chr2:235494849:+ chr17:76462316:+ . NA TCGA-39-5034-01A-01R-1443-07 CAPN15-DECR2 3 4 chr16:528029:+ chr16:404956:+ . NA TCGA-39-5034-01A-01R-1443-07 CAPN15-NME4 3 3 chr16:528029:+ chr16:404956:+ . NA TCGA-39-5034-01A-01R-1443-07 DHX34-ARHGAP35 2 3 chr19:47360070:+ chr19:46987989:+ INFRAME NA TCGA-39-5034-01A-01R-1443-07 NEK7-ATP2B4 1 5 chr1:198157276:+ chr1:203682742:+ . NA TCGA-39-5034-01A-01R-1443-07 SFTA3-SLC25A21 1000 1000 chr14:36513113:- chr14:36683881:- . NA TCGA-39-5035-01A-01R-1443-07 TUBB-MDC1 143 879 chr6:30723762:+ chr6:30700573:- FRAMESHIFT NA TCGA-39-5035-01A-01R-1443-07 IL1RAP-TP63 42 283 chr3:190514219:+ chr3:189808272:+ . NA TCGA-39-5035-01A-01R-1443-07 NDUFA10-SGPP2 9 46 chr2:239990074:- chr2:222521767:+ INFRAME NA TCGA-39-5035-01A-01R-1443-07 SNX8-KDELR2 2 13 chr7:2314328:- chr7:6463175:- INFRAME NA TCGA-39-5035-01A-01R-1443-07 FGGY-KIF2C 2 5 chr1:59378837:+ chr1:44747384:+ FRAMESHIFT NA TCGA-39-5036-01A-01R-1443-07 WNT5B-NINJ2 1 4 chr12:1530950:+ chr12:566178:- . NA TCGA-39-5037-01A-01R-1443-07 RAB25-PMF1 64 468 chr1:156061443:+ chr1:156232320:+ FRAMESHIFT NA TCGA-39-5037-01A-01R-1443-07 HECTD4-FMNL2 5 3 chr12:112226469:- chr2:152649679:+ . NA TCGA-39-5037-01A-01R-1443-07 SLCO4A1-PFDN4 3 4 chr20:62657250:+ chr20:54208013:+ . NA TCGA-39-5037-01A-01R-1443-07 APTX-ARL5B 2 6 chr9:32987760:- chr10:18672622:+ INFRAME NA TCGA-39-5039-01A-01R-1443-07 CCNL2-MRPL20 3 14 chr1:1398233:- chr1:1402256:- INFRAME NA TCGA-39-5039-01A-01R-1443-07 MAP4K5-RPEL1 3 6 chr14:50482361:- chr10:103247730:+ . NA TCGA-39-5040-01A-21R-2125-07 PPP1R12B-SUSD4 2 9 chr1:202349142:+ chr1:223235100:- FRAMESHIFT NA TCGA-39-5040-01A-21R-2125-07 URI1-CCNE1 1 13 chr19:29942664:+ chr19:29812689:+ FRAMESHIFT NA TCGA-39-5040-01A-21R-2125-07 SEMA6C-CERS2 1 3 chr1:151139425:- chr1:150969091:- . NA TCGA-43-2578-01A-01R-0851-07 GLG1-CFDP1 31 136 chr16:74532121:- chr16:75294042:- FRAMESHIFT NA TCGA-43-2578-01A-01R-0851-07 GBE1-ZNF385D 21 61 chr3:81577925:- chr3:21437203:- INFRAME NA TCGA-43-2578-01A-01R-0851-07 TXNRD1-HCFC2 6 69 chr12:104289040:+ chr12:104080746:+ FRAMESHIFT NA TCGA-43-2578-01A-01R-0851-07 HNRNPA2B1-SKAP2 3 5 chr7:26195847:- chr7:26690362:- INFRAME NA TCGA-43-2578-01A-01R-0851-07 ITGAV-FARP2 2 8 chr2:186669814:+ chr2:241489962:+ INFRAME NA TCGA-43-2578-01A-01R-0851-07 PAPD5-HEATR3 3 3 chr16:50154259:+ chr16:50083937:+ FRAMESHIFT NA TCGA-43-2578-01A-01R-0851-07 RAB6B-VEPH1 1 3 chr3:133864584:- chr3:157470529:- INFRAME NA TCGA-43-2581-01A-01R-0851-07 METTL21B-RASSF3 76 269 chr12:57773128:+ chr12:64684787:+ FRAMESHIFT NA TCGA-43-2581-01A-01R-0851-07 UBALD2-TIMP2 28 120 chr17:76265969:+ chr17:78873919:- FRAMESHIFT NA TCGA-43-2581-01A-01R-0851-07 UBALD2-CEP295NL 28 117 chr17:76265969:+ chr17:78873919:- . NA TCGA-43-2581-01A-01R-0851-07 NMT1-NME1 7 82 chr17:45061460:+ chr17:51155651:+ INFRAME NA TCGA-43-2581-01A-01R-0851-07 MSI2-ARL17B 7 47 chr17:57262192:+ chr17:46275418:- . NA TCGA-43-2581-01A-01R-0851-07 UNK-AVIL 5 31 chr17:75784984:+ chr12:57816059:- . NA TCGA-43-2581-01A-01R-0851-07 TANC2-PRKCA 7 22 chr17:63074014:+ chr17:66687111:+ INFRAME NA TCGA-43-2581-01A-01R-0851-07 DGKE-EPN3 3 21 chr17:56835259:+ chr17:50540793:+ INFRAME NA TCGA-43-2581-01A-01R-0851-07 PRPSAP2-CYP27B1 2 4 chr17:18923984:+ chr12:57765499:- FRAMESHIFT NA TCGA-43-3394-01A-01R-0980-07 ITGB4-SMIM6 53 266 chr17:75733692:+ chr17:75646655:+ . NA TCGA-43-3394-01A-01R-0980-07 ADCY3-HADHA 1 5 chr2:24918313:- chr2:26194638:- INFRAME NA TCGA-43-3394-01A-01R-0980-07 PPP4R3B-GRM3 1 4 chr2:55585051:- chr7:86765006:+ . NA TCGA-43-3920-01A-01R-0980-07 DIDO1-RPS4X 48 236 chr20:62937796:- chrX:72275724:- . NA TCGA-43-3920-01A-01R-0980-07 ART3-NUP54 38 119 chr4:76103969:+ chr4:76115494:- FRAMESHIFT NA TCGA-43-3920-01A-01R-0980-07 UNK-DPYD 7 67 chr17:75784984:+ chr1:97573970:- FRAMESHIFT NA TCGA-43-3920-01A-01R-0980-07 NDUFA11-ZNF846 1 7 chr19:5896453:- chr19:9787810:- . NA TCGA-43-5668-01A-01R-1635-07 EIF3L-TRIOBP 28 214 chr22:37878171:+ chr22:37751772:+ INFRAME NA TCGA-43-5668-01A-01R-1635-07 TC2N-LPP 22 132 chr14:91813703:- chr3:188866200:+ FRAMESHIFT NA TCGA-43-5668-01A-01R-1635-07 THOC5-LYZ 1 65 chr22:29517029:- chr12:69352220:+ INFRAME NA TCGA-43-5668-01A-01R-1635-07 MTMR3-RNF215 6 23 chr22:29957088:+ chr22:30380401:- . NA TCGA-43-5668-01A-01R-1635-07 NDUFS4-EXTL3 5 23 chr5:53603530:+ chr8:28737519:+ FRAMESHIFT NA TCGA-43-5668-01A-01R-1635-07 MARK3-FBLN5 4 25 chr14:103405267:+ chr14:91895072:- FRAMESHIFT NA TCGA-43-5668-01A-01R-1635-07 MARCH1-PTPN13 1 4 chr4:163854021:- chr4:86635252:+ . NA TCGA-43-5668-01A-01R-1635-07 CDK16-L3MBTL4 1 2 chrX:47226703:+ chr18:6093528:- INFRAME NA TCGA-43-5670-01A-21R-2125-07 MXRA8-CDK11B 41 157 chr1:1358456:- chr1:1657498:- . NA TCGA-43-5670-01A-21R-2125-07 FAM222B-TLCD1 6 49 chr17:28842682:- chr17:28724893:- . NA TCGA-43-5670-01A-21R-2125-07 TNPO2-DNASE2 7 41 chr19:12705240:- chr19:12876363:- FRAMESHIFT NA TCGA-43-5670-01A-21R-2125-07 CTIF-MOCOS 4 46 chr18:48539312:+ chr18:36248922:+ . NA TCGA-43-5670-01A-21R-2125-07 CCDC88B-TEX40 4 21 chr11:64352386:+ chr11:64304543:+ FRAMESHIFT NA TCGA-43-5670-01A-21R-2125-07 RELT-TEX40 3 15 chr11:73394149:+ chr11:64304543:+ . NA TCGA-43-5670-01A-21R-2125-07 ABCG1-CCDC134 4 10 chr21:42294660:+ chr22:41808875:+ . NA TCGA-43-5670-01A-21R-2125-07 CCDC88B-RELT 3 14 chr11:64352861:+ chr11:73393997:+ . NA TCGA-43-5670-01A-21R-2125-07 ABCG1-MEI1 2 6 chr21:42294660:+ chr22:41799254:+ INFRAME NA TCGA-43-5670-01A-21R-2125-07 FBLN1-PAK4 1 9 chr22:45550615:+ chr19:39169532:+ INFRAME NA TCGA-43-5670-01A-21R-2125-07 IQCK-ABCC1 2 4 chr16:19735450:+ chr16:16033109:+ INFRAME NA TCGA-43-6143-01A-11R-1820-07 KIAA1456-GATA4 9 39 chr8:12991031:+ chr8:11748919:+ . NA TCGA-43-6143-01A-11R-1820-07 ZNRF3-MED15 5 25 chr22:28884066:+ chr22:20537117:+ FRAMESHIFT NA TCGA-43-6143-01A-11R-1820-07 TBC1D1-RAB28 2 9 chr4:38054338:+ chr4:13479526:- FRAMESHIFT NA TCGA-43-6143-01A-11R-1820-07 NFIB-FREM1 1 4 chr9:14146689:- chr9:14756446:- FRAMESHIFT NA TCGA-43-6143-01A-11R-1820-07 POLR3E-C16orf52 1 3 chr16:22297537:+ chr16:22075487:+ . NA TCGA-43-6647-01A-11R-1820-07 BCL11A-MIR4432HG 2 13 chr2:60545971:- chr2:60359848:- . NA TCGA-43-6770-01A-11R-1820-07 PCGF3-FANCI 191 321 chr4:744688:+ chr15:89312904:+ INFRAME NA TCGA-43-6770-01A-11R-1820-07 RPAP3-ADAM32 6 49 chr12:47679493:- chr8:39283586:+ FRAMESHIFT NA TCGA-43-6770-01A-11R-1820-07 RTN4R-SLC35G2 3 7 chr22:20268071:- chr3:136854443:+ . NA TCGA-43-6770-01A-11R-1820-07 COTL1-PREX2 1 2 chr16:84617501:- chr8:68191722:+ FRAMESHIFT NA TCGA-43-6771-01A-11R-1820-07 HIPK3-LARGE2 85 517 chr11:33257889:+ chr11:45926222:+ . NA TCGA-43-6771-01A-11R-1820-07 PPP6R3-ARHGAP1 27 238 chr11:68460827:+ chr11:46696156:- . NA TCGA-43-6771-01A-11R-1820-07 MRPL21-FAM168A 24 149 chr11:68893403:- chr11:73407643:- FRAMESHIFT NA TCGA-43-6771-01A-11R-1820-07 PPFIA1-ALDH3B1 28 83 chr11:70343892:+ chr11:68027749:+ FRAMESHIFT NA TCGA-43-6771-01A-11R-1820-07 SHANK2-ENPP7P7 7 13 chr11:70659828:- chr11:67812753:- . NA TCGA-43-6771-01A-11R-1820-07 SHANK2-C11orf49 1 5 chr11:70798443:- chr11:46987208:+ INFRAME NA TCGA-43-7656-01A-11R-2125-07 LYST-NID1 1 5 chr1:235812971:- chr1:236012043:- INFRAME NA TCGA-43-7656-01A-11R-2125-07 ARHGAP5-AKAP6 1 3 chr14:32094386:+ chr14:32773678:+ INFRAME NA TCGA-43-7657-01A-31R-2125-07 RAB4B-COQ8B 40 139 chr19:40778391:+ chr19:40696054:- INFRAME NA TCGA-43-7657-01A-31R-2125-07 CELF1-CHMP4B 17 80 chr11:47552992:- chr20:33850952:+ . NA TCGA-43-7657-01A-31R-2125-07 LNX1-IFT122 19 44 chr4:53573623:- chr3:129449871:+ INFRAME NA TCGA-43-7657-01A-31R-2125-07 ZFAND3-UBQLN1 3 15 chr6:37929999:+ chr9:83686155:- INFRAME NA TCGA-43-7657-01A-31R-2125-07 ZNF599-SCN1B 2 3 chr19:34767316:- chr19:35032528:+ INFRAME NA TCGA-43-7657-01A-31R-2125-07 CWF19L2-JAML 1 6 chr11:107416209:- chr11:118205991:- FRAMESHIFT NA TCGA-43-7658-01A-11R-2125-07 TECR-PKN1 67 254 chr19:14529711:+ chr19:14463667:+ INFRAME NA TCGA-43-7658-01A-11R-2125-07 SRCAP-IL11RA 19 88 chr16:30713711:+ chr9:34655218:+ INFRAME NA TCGA-43-7658-01A-11R-2125-07 ART3-SLC25A13 15 87 chr4:76075958:+ chr7:96146696:- INFRAME NA TCGA-43-7658-01A-11R-2125-07 AKAP9-CDK14 7 43 chr7:92084703:+ chr7:91079432:+ INFRAME NA TCGA-43-7658-01A-11R-2125-07 UTRN-MRPL42P3 3 22 chr6:144291907:+ chr6:144136472:+ . NA TCGA-43-7658-01A-11R-2125-07 DYNC1I1-CXCL11 4 12 chr7:96080488:+ chr4:76036064:- . NA TCGA-43-7658-01A-11R-2125-07 TRIM73-POR 4 6 chr7:75395503:+ chr7:75953989:+ . NA TCGA-43-7658-01A-11R-2125-07 ZFP90-PRMT7 3 3 chr16:68530334:+ chr16:68329066:+ . NA TCGA-43-7658-01A-11R-2125-07 PEX1-AKAP9 1 5 chr7:92491272:- chr7:92052726:+ FRAMESHIFT NA TCGA-43-8115-01A-11R-2247-07 CAMSAP2-CARS 5 25 chr1:200854889:+ chr11:3001248:- INFRAME NA TCGA-43-8115-01A-11R-2247-07 PPP1R12A-ATP23 4 23 chr12:79845302:- chr12:57945628:+ INFRAME NA TCGA-43-8115-01A-11R-2247-07 EGLN1-PTPRF 3 18 chr1:231420998:- chr1:43617445:+ INFRAME NA TCGA-43-8115-01A-11R-2247-07 KAT6A-CSMD1 3 3 chr8:42048378:- chr8:4637558:- FRAMESHIFT NA TCGA-43-8115-01A-11R-2247-07 NUP35-NCKAP1 2 3 chr2:183124497:+ chr2:182989186:- INFRAME NA TCGA-43-8115-01A-11R-2247-07 FAM234B-YBX3 2 2 chr12:13044440:+ chr12:10719143:- INFRAME NA TCGA-43-8115-01A-11R-2247-07 KDM4A-EGLN1 1 6 chr1:43660412:+ chr1:231374099:- INFRAME NA TCGA-43-8115-01A-11R-2247-07 LAMA3-C18orf8 1 6 chr18:23714072:+ chr18:23515856:+ INFRAME NA TCGA-43-8116-01A-11R-2247-07 ZNF518A-ATRNL1 1 26 chr10:96133648:+ chr10:115549458:+ . NA TCGA-43-8116-01A-11R-2247-07 ATG7-ARMC3 4 8 chr3:11364734:+ chr10:23030596:+ INFRAME NA TCGA-43-8116-01A-11R-2247-07 ATE1-DNAJB12 1 8 chr10:121910906:- chr10:72345127:- INFRAME NA TCGA-43-8116-01A-11R-2247-07 EIF2AK4-FEM1B 2 3 chr15:40022605:+ chr15:68289607:+ FRAMESHIFT NA TCGA-43-8116-01A-11R-2247-07 TMEM117-TTC33 1 6 chr12:43844928:+ chr5:40716498:- FRAMESHIFT NA TCGA-43-A474-01A-11R-A24H-07 RAD51B-GPHN 4 22 chr14:67887204:+ chr14:67159415:+ INFRAME NA TCGA-43-A474-01A-11R-A24H-07 MECOM-ARMC8 3 7 chr3:169381187:- chr3:138289048:+ INFRAME NA TCGA-43-A475-01A-11R-A24H-07 TAF8-SLC22A16 151 413 chr6:42056014:+ chr6:110442775:- FRAMESHIFT NA TCGA-43-A475-01A-11R-A24H-07 METTL24-BYSL 16 76 chr6:110322774:- chr6:41927374:+ FRAMESHIFT NA TCGA-43-A56U-01A-11R-A26W-07 SF1-EHD1 2 24 chr11:64776498:- chr11:64860336:- INFRAME NA TCGA-43-A56U-01A-11R-A26W-07 FOSL2-PPDPF 3 8 chr2:28395777:+ chr20:63520786:+ . NA TCGA-43-A56U-01A-11R-A26W-07 TUBBP5-SPRR4 3 7 chr9:138150308:+ chr1:152971871:+ . NA TCGA-43-A56V-01A-11R-A26W-07 SLC25A24P2-NTNG1 1 6 chr1:108410028:- chr1:107395154:+ . NA TCGA-46-3765-01A-01R-0980-07 MCCC1-ADAMTSL3 7 35 chr3:183099352:- chr15:83890109:+ FRAMESHIFT NA TCGA-46-3765-01A-01R-0980-07 MTF2-CTNND2 5 27 chr1:93079531:+ chr5:11199661:- FRAMESHIFT NA TCGA-46-3765-01A-01R-0980-07 DUSP12-CR2 5 23 chr1:161750145:+ chr1:207485464:+ INFRAME NA TCGA-46-3765-01A-01R-0980-07 DGCR8-CRKL 2 23 chr22:20109003:+ chr22:20933779:+ FRAMESHIFT NA TCGA-46-3765-01A-01R-0980-07 B4GALT1-PHF24 5 8 chr9:33120419:- chr9:34971295:+ . NA TCGA-46-3765-01A-01R-0980-07 CHRM3-CASQ1 2 12 chr1:239827378:+ chr1:160192802:+ . NA TCGA-46-3765-01A-01R-0980-07 TRIO-FBXL7 1 9 chr5:14390990:+ chr5:15615983:+ FRAMESHIFT NA TCGA-46-3767-01A-01R-0980-07 SACS-MIPEP 4 15 chr13:23411220:- chr13:23841488:- INFRAME NA TCGA-46-3767-01A-01R-0980-07 PTK2-UBE2H 1 8 chr8:141000880:- chr7:129839335:- . NA TCGA-46-3767-01A-01R-0980-07 YEATS2-TPRG1 1 3 chr3:183777700:+ chr3:189207376:+ . NA TCGA-46-3767-01A-01R-0980-07 ASAP2-TAF1B 1 2 chr2:9207230:+ chr2:9882706:+ FRAMESHIFT NA TCGA-46-3769-01A-01R-0980-07 FOXP4-CCND3 9 162 chr6:41578081:+ chr6:41940585:- INFRAME NA TCGA-46-3769-01A-01R-0980-07 LRRC1-TINAG 18 85 chr6:53842227:+ chr6:54343226:+ FRAMESHIFT NA TCGA-46-3769-01A-01R-0980-07 CAMTA1-DHRS3 9 53 chr1:6785575:+ chr1:12580666:- INFRAME NA TCGA-46-3769-01A-01R-0980-07 AFAP1-SLC45A1 8 28 chr4:7800442:- chr1:8324306:+ INFRAME NA TCGA-46-3769-01A-01R-0980-07 GPR146-DTNBP1 4 3 chr7:1044658:+ chr6:15533395:- . NA TCGA-46-3769-01A-01R-0980-07 GPC6-SMG1 3 6 chr13:94403556:+ chr16:18804942:- . NA TCGA-46-3769-01A-01R-0980-07 ME2-MRO 2 8 chr18:50879308:+ chr18:50806850:- . NA TCGA-46-3769-01A-01R-0980-07 USP22-CCDC144NL 1 12 chr17:21019084:- chr17:20866703:- INFRAME NA TCGA-46-6025-01A-11R-1820-07 CELSR1-SEZ6L 137 521 chr22:46533627:- chr22:26292406:+ INFRAME NA TCGA-46-6025-01A-11R-1820-07 STX5-SNHG1 22 177 chr11:62824166:- chr11:62852839:- . NA TCGA-46-6025-01A-11R-1820-07 TLK1-CREG2 10 95 chr2:171046174:- chr2:101355366:- INFRAME NA TCGA-46-6025-01A-11R-1820-07 KCNAB2-POLB 10 35 chr1:5992788:+ chr8:42344953:+ . NA TCGA-46-6025-01A-11R-1820-07 GRB2-TCTEX1D2 13 21 chr17:75393551:- chr3:196296069:- FRAMESHIFT NA TCGA-46-6025-01A-11R-1820-07 GRB2-PCYT1A 8 20 chr17:75393551:- chr3:196270541:- . NA TCGA-46-6025-01A-11R-1820-07 UQCC1-GDF5 7 20 chr20:35411940:- chr20:35434783:- FRAMESHIFT NA TCGA-46-6025-01A-11R-1820-07 RAPGEF5-MRPS22 3 13 chr7:22230846:- chr3:139346878:+ FRAMESHIFT NA TCGA-46-6025-01A-11R-1820-07 POLG2-DDX5 2 15 chr17:64492667:- chr17:64500326:- FRAMESHIFT NA TCGA-46-6025-01A-11R-1820-07 FNDC3B-SPATA16 3 4 chr3:172039771:+ chr3:172889692:- . NA TCGA-46-6025-01A-11R-1820-07 NDUFA10-TMEM207 1 7 chr2:240005210:- chr3:190429731:- FRAMESHIFT NA TCGA-46-6025-01A-11R-1820-07 SETD4-B4GALT6 2 3 chr21:36040575:- chr18:31666372:- FRAMESHIFT NA TCGA-46-6025-01A-11R-1820-07 TRAF3IP1-ITSN2 1 5 chr2:238329342:+ chr2:24275849:- INFRAME NA TCGA-46-6026-01A-11R-1820-07 PREP-SIM1 16 96 chr6:105288758:- chr6:100420958:- INFRAME NA TCGA-46-6026-01A-11R-1820-07 TRIP12-KIF1A 6 19 chr2:229921880:- chr2:240797812:- . NA TCGA-46-6026-01A-11R-1820-07 ZSWIM4-SLC1A6 1 13 chr19:13799921:+ chr19:14972917:- FRAMESHIFT NA TCGA-46-6026-01A-11R-1820-07 HACE1-ASCC3 1 4 chr6:104843223:- chr6:100864214:- INFRAME NA TCGA-51-4079-01A-01R-1100-07 TXNRD1-GNAS 2 1 chr12:104287109:+ chr20:58895612:+ . NA TCGA-51-4081-01A-01R-1100-07 FAM83F-FST 3 16 chr22:40026046:+ chr5:53486955:+ . NA TCGA-52-7622-01A-11R-2125-07 GOLIM4-RNF175 16 50 chr3:168095099:- chr4:153715662:- FRAMESHIFT NA TCGA-52-7622-01A-11R-2125-07 FXR1-KLHL24 2 11 chr3:180957928:+ chr3:183643480:+ . NA TCGA-52-7622-01A-11R-2125-07 ARID1A-ZDHHC18 2 6 chr1:26732792:+ chr1:26848608:+ FRAMESHIFT Likely Oncogenic NA TCGA-52-7622-01A-11R-2125-07 LRRC58-MROH5 1 9 chr3:120334862:- chr8:141448088:- FRAMESHIFT NA TCGA-52-7809-01A-21R-2125-07 RB1-GADD45GIP1 7 20 chr13:48381443:+ chr19:12954526:- FRAMESHIFT Likely Oncogenic NA TCGA-52-7809-01A-21R-2125-07 TRIM33-CSMD2 3 16 chr1:114405410:- chr1:33663092:- INFRAME NA TCGA-52-7809-01A-21R-2125-07 MAPRE1-TMEM131 2 9 chr20:32846770:+ chr2:97927487:- FRAMESHIFT NA TCGA-52-7809-01A-21R-2125-07 OXSR1-MYD88 2 6 chr3:38190839:+ chr3:38139864:+ INFRAME NA TCGA-52-7809-01A-21R-2125-07 EFR3B-NCAN 1 4 chr2:25091401:+ chr19:19216947:+ . NA TCGA-52-7810-01A-11R-2125-07 XRN2-TMEM40 8 39 chr20:21354872:+ chr3:12749840:- . NA TCGA-52-7810-01A-11R-2125-07 DPF2-CDC42EP2 10 14 chr11:65333918:+ chr11:65320544:+ . NA TCGA-52-7810-01A-11R-2125-07 DCAF15-C19orf57 7 6 chr19:13952644:+ chr19:13895546:- FRAMESHIFT NA TCGA-52-7810-01A-11R-2125-07 SENP6-PPIL6 4 11 chr6:75697517:+ chr6:109431345:- FRAMESHIFT NA TCGA-52-7810-01A-11R-2125-07 PLEKHG4B-AHRR 4 7 chr5:151599:+ chr5:343893:+ FRAMESHIFT NA TCGA-52-7810-01A-11R-2125-07 PLEKHG4B-PDCD6 4 7 chr5:151599:+ chr5:343893:+ FRAMESHIFT NA TCGA-52-7810-01A-11R-2125-07 PPP2R3A-SPSB4 2 12 chr3:136103376:+ chr3:141147142:+ FRAMESHIFT NA TCGA-52-7810-01A-11R-2125-07 COL21A1-DST 1 12 chr6:56168124:- chr6:56517620:- INFRAME NA TCGA-52-7810-01A-11R-2125-07 ARHGAP32-TP53AIP1 2 7 chr11:129093621:- chr11:128936649:- INFRAME NA TCGA-52-7810-01A-11R-2125-07 GTSE1-TTC38 1 10 chr22:46297479:+ chr22:46292203:+ FRAMESHIFT NA TCGA-52-7810-01A-11R-2125-07 CDC27-HLF 1 1 chr17:47181562:- chr17:55267751:+ INFRAME NA TCGA-52-7811-01A-11R-2125-07 COL5A3-THRAP3 2 1 chr19:9980648:- chr1:36296583:+ INFRAME NA TCGA-52-7811-01A-11R-2125-07 CAMSAP2-KCNH1 1 4 chr1:200815644:+ chr1:210804166:- INFRAME NA TCGA-52-7812-01A-11R-2125-07 DSTN-ARPC5 16 106 chr20:17570211:+ chr1:183630637:- INFRAME NA TCGA-52-7812-01A-11R-2125-07 ATP2C1-COL6A6 16 50 chr3:130930526:+ chr3:130675202:+ FRAMESHIFT NA TCGA-56-1622-01A-01R-0692-07 PHC3-FNDC3B 27 112 chr3:170145423:- chr3:172397164:+ INFRAME NA TCGA-56-1622-01A-01R-0692-07 NAALADL2-SMC5 1 4 chr3:174864090:+ chr9:70344144:+ . NA TCGA-56-1622-01A-01R-0692-07 SLC20A2-IDO1 1 2 chr8:42501031:- chr8:39927830:+ . NA TCGA-56-5897-01A-11R-1635-07 B4GALT4-ACSL5 17 53 chr3:119226809:- chr10:112422325:+ INFRAME NA TCGA-56-5897-01A-11R-1635-07 CIAO1-SERTAD2 1 4 chr2:96268658:+ chr2:64636875:- . NA TCGA-56-5898-01A-11R-1635-07 B3GNT5-ALG3 32 211 chr3:183253472:+ chr3:184245812:- . NA TCGA-56-5898-01A-11R-1635-07 ECE2-HTR3C 23 71 chr3:184249890:+ chr3:184059828:+ INFRAME NA TCGA-56-5898-01A-11R-1635-07 STRADA-LYZ 5 61 chr17:63728334:- chr12:69350108:+ FRAMESHIFT NA TCGA-56-5898-01A-11R-1635-07 MSN-HTR3D 1 42 chrX:65667853:+ chr3:184038021:+ INFRAME NA TCGA-56-5898-01A-11R-1635-07 ABCC5-ATP11B 7 16 chr3:183987770:- chr3:182820260:+ INFRAME NA TCGA-56-5898-01A-11R-1635-07 ABCC5-DCUN1D1 2 22 chr3:183987770:- chr3:182945173:- FRAMESHIFT NA TCGA-56-5898-01A-11R-1635-07 UHRF1BP1-OSBPL1A 4 5 chr6:34792294:+ chr18:24377535:- . NA TCGA-56-6545-01A-11R-1820-07 PJA2-ADGRV1 296 773 chr5:109409842:- chr5:91150030:+ . NA TCGA-56-6545-01A-11R-1820-07 TANK-MNAT1 45 257 chr2:161179761:+ chr14:60968229:+ FRAMESHIFT NA TCGA-56-6545-01A-11R-1820-07 PHKA2-CD99P1 10 27 chrX:18905758:- chrY:2637974:+ . NA TCGA-56-6545-01A-11R-1820-07 EPS15L1-ZNF473 8 16 chr19:16434365:- chr19:50044670:+ FRAMESHIFT NA TCGA-56-6545-01A-11R-1820-07 TANK-SLC38A6 8 14 chr2:161179761:+ chr14:60982508:+ INFRAME NA TCGA-56-6545-01A-11R-1820-07 GNGT1-CALCR 1 40 chr7:93591771:+ chr7:93574506:- . NA TCGA-56-6545-01A-11R-1820-07 ADAMTS17-CERS3 2 7 chr15:100254136:- chr15:100402865:- FRAMESHIFT NA TCGA-56-6545-01A-11R-1820-07 ASAH1-WWOX 3 3 chr8:18069792:- chr16:79211608:+ INFRAME NA TCGA-56-6546-01A-11R-1820-07 ROBO2-ERLIN2 8 32 chr3:77098340:+ chr8:37744571:+ INFRAME NA TCGA-56-6546-01A-11R-1820-07 CTIF-PSTPIP2 3 9 chr18:48539312:+ chr18:46040047:- . NA TCGA-56-6546-01A-11R-1820-07 HMCN1-RNF2 1 2 chr1:185735047:+ chr1:185087552:+ . NA TCGA-56-7221-01A-11R-2045-07 ARHGEF18-TECR 4 7 chr19:7470315:+ chr19:14562525:+ . NA TCGA-56-7221-01A-11R-2045-07 PPFIA1-LRRC4C 1 3 chr11:70272436:+ chr11:41223008:- . NA TCGA-56-7223-01A-11R-2045-07 MCCC1-FXR1 32 55 chr3:183070999:- chr3:180961468:+ FRAMESHIFT NA TCGA-56-7223-01A-11R-2045-07 KLHL24-MCF2L2 5 98 chr3:183643542:+ chr3:183231212:- . NA TCGA-56-7223-01A-11R-2045-07 HOMER1-DMGDH 13 64 chr5:79439010:- chr5:79063787:- INFRAME NA TCGA-56-7223-01A-11R-2045-07 KIRREL-PYHIN1 11 20 chr1:158093762:+ chr1:158941977:+ INFRAME NA TCGA-56-7223-01A-11R-2045-07 FAM20C-MKRN1 3 8 chr7:208976:+ chr7:140472011:- INFRAME NA TCGA-56-7223-01A-11R-2045-07 PPP1R2-CLDN1 1 7 chr3:195529794:- chr3:190313036:- FRAMESHIFT NA TCGA-56-7579-01A-11R-2045-07 ELF2-ICA1L 2 17 chr4:139060324:- chr2:202829016:- . NA TCGA-56-7580-01A-11R-2045-07 SKIL-FNDC3B 22 507 chr3:170361429:+ chr3:172346327:+ INFRAME NA TCGA-56-7580-01A-11R-2045-07 PLD1-TNFSF10 3 9 chr3:171810399:- chr3:172514998:- . NA TCGA-56-7580-01A-11R-2045-07 KIAA1217-THNSL1 2 7 chr10:24474060:+ chr10:25021742:+ . NA TCGA-56-7580-01A-11R-2045-07 UBE2R2-NFX1 2 6 chr9:33817934:+ chr9:33366629:+ INFRAME NA TCGA-56-7582-01A-11R-2045-07 CENPF-EGLN1 3 2 chr1:214622281:+ chr1:231374099:- INFRAME NA TCGA-56-7730-01A-11R-2125-07 CTNNBIP1-UBE4B 28 18 chr1:9910095:- chr1:10178644:+ . NA TCGA-56-7730-01A-11R-2125-07 NAALADL2-MCCC1 6 29 chr3:175627386:+ chr3:183034077:- INFRAME NA TCGA-56-7730-01A-11R-2125-07 UBE4B-PLEKHG5 2 8 chr1:10033694:+ chr1:6496569:- FRAMESHIFT NA TCGA-56-7730-01A-11R-2125-07 MYNN-NLGN1 1 3 chr3:169779561:+ chr3:173807680:+ INFRAME NA TCGA-56-7730-01A-11R-2125-07 TNIK-SPATA16 1 2 chr3:171460007:- chr3:173117749:- . NA TCGA-56-7822-01A-11R-2125-07 DST-AKAP6 4 8 chr6:56600069:- chr14:32678311:+ INFRAME NA TCGA-56-7823-01B-11R-2247-07 PARP8-CRYL1 3 129 chr5:50668125:+ chr13:20404741:- FRAMESHIFT NA TCGA-56-7823-01B-11R-2247-07 ATP11B-FXR1 10 48 chr3:182793786:+ chr3:180968051:+ FRAMESHIFT NA TCGA-56-7823-01B-11R-2247-07 ATP11A-F7 5 56 chr13:112785257:+ chr13:113113847:+ INFRAME NA TCGA-56-7823-01B-11R-2247-07 TFDP1-ATP11A 2 14 chr13:113585849:+ chr13:112785135:+ INFRAME NA TCGA-56-7823-01B-11R-2247-07 COL4A2-CDC16 2 6 chr13:110357552:+ chr13:114262879:+ FRAMESHIFT NA TCGA-56-8082-01A-11R-2247-07 CSTA-CASR 4 17 chr3:122337648:+ chr3:122275812:+ INFRAME NA TCGA-56-8082-01A-11R-2247-07 B3GALNT2-GNG4 1 16 chr1:235494681:- chr1:235552237:- FRAMESHIFT NA TCGA-56-8082-01A-11R-2247-07 DST-BMP5 2 8 chr6:56526361:- chr6:55794427:- FRAMESHIFT NA TCGA-56-8083-01A-11R-2247-07 ANO1-FGF3 14 119 chr11:70126195:+ chr11:69816423:- FRAMESHIFT NA TCGA-56-8083-01A-11R-2247-07 UGP2-PLEKHM3 11 33 chr2:63857936:+ chr2:207931119:- INFRAME NA TCGA-56-8083-01A-11R-2247-07 USP34-ZNF2 2 62 chr2:61222619:- chr2:95176188:+ . NA TCGA-56-8083-01A-11R-2247-07 ANKIB1-LMTK2 1 19 chr7:92352642:+ chr7:98185051:+ INFRAME NA TCGA-56-8201-01A-11R-2247-07 PIGU-ACSS2 5 11 chr20:34637876:- chr20:34913096:+ INFRAME NA TCGA-56-8304-01A-11R-2326-07 PRR12-FLT3LG 1 3 chr19:49601918:+ chr19:49480298:+ FRAMESHIFT NA TCGA-56-8305-01A-11R-2296-07 CHMP4B-EFCAB8 3 11 chr20:33811658:+ chr20:32943636:+ FRAMESHIFT NA TCGA-56-8307-01A-11R-2296-07 CLCN4-TFAP2A 22 78 chrX:10158551:+ chr6:10398705:- . NA TCGA-56-8307-01A-11R-2296-07 CDKAL1-CLCN4 7 17 chr6:20535394:+ chrX:10185022:+ . NA TCGA-56-8307-01A-11R-2296-07 ATXN1-FOXCUT 4 6 chr6:16485972:- chr6:1606016:+ . NA TCGA-56-8308-01A-11R-2296-07 LDLRAD3-FLJ42102 4 82 chr11:36098461:+ chr11:71389515:- . NA TCGA-56-8503-01A-11R-2403-07 SPG11-CD9 10 30 chr15:44648866:- chr12:6225426:+ INFRAME NA TCGA-56-8503-01A-11R-2403-07 ATRN-TNKS2 4 26 chr20:3584880:+ chr10:91812983:+ INFRAME NA TCGA-56-8622-01A-11R-2403-07 ERC1-MRPL51 2 34 chr12:991322:+ chr12:6492972:- . NA TCGA-56-8622-01A-11R-2403-07 ATP2C1-MBNL1 1 11 chr3:130894337:+ chr3:152299405:+ . NA TCGA-56-8625-01A-11R-2403-07 PUS1-CTNNBIP1 2 19 chr12:131932312:+ chr1:9877989:- . NA TCGA-56-8625-01A-11R-2403-07 HADHB-CENPO 1 4 chr2:26277160:+ chr2:24814376:+ FRAMESHIFT NA TCGA-56-8625-01A-11R-2403-07 PPM1H-C12orf66 1 3 chr12:62934492:- chr12:64215963:- FRAMESHIFT NA TCGA-56-8628-01A-11R-2403-07 AP2M1-MAP3K13 112 637 chr3:184180984:+ chr3:185328624:+ . NA TCGA-56-8628-01A-11R-2403-07 NFIX-WDR26 5 15 chr19:13025552:+ chr1:224394013:- INFRAME NA TCGA-56-8628-01A-11R-2403-07 DVL3-VPS8 3 16 chr3:184170729:+ chr3:184862897:+ FRAMESHIFT NA TCGA-56-8629-01A-11R-2403-07 RNF40-IL21R 2 22 chr16:30763559:+ chr16:27430056:+ . NA TCGA-56-8629-01A-11R-2403-07 PARVB-ATP6V1D 1 8 chr22:44024451:+ chr14:67353040:- FRAMESHIFT NA TCGA-56-8629-01A-11R-2403-07 PRTG-DPH6 1 7 chr15:55679286:- chr15:35542507:- INFRAME NA TCGA-56-A49D-01A-11R-A24H-07 TEC-HMGCLL1 3 11 chr4:48228477:- chr6:55439559:- INFRAME NA TCGA-56-A49D-01A-11R-A24H-07 ROCK1-RNF38 2 12 chr18:21110818:- chr9:36376127:- INFRAME NA TCGA-56-A49D-01A-11R-A24H-07 GNE-ROCK1 2 6 chr9:36236832:- chr18:21070613:- FRAMESHIFT NA TCGA-56-A4BW-01A-11R-A24H-07 BAIAP2L1-ANKIB1 18 15 chr7:98400802:- chr7:92294889:+ . NA TCGA-56-A4BW-01A-11R-A24H-07 UBE4B-PDPN 1 10 chr1:10168270:+ chr1:13607173:+ FRAMESHIFT NA TCGA-56-A4BY-01A-11R-A24H-07 KLHL24-B3GNT5 268 1696 chr3:183635793:+ chr3:183287605:+ . NA TCGA-56-A4BY-01A-11R-A24H-07 YEATS2-ATP11B 178 1006 chr3:183777700:+ chr3:182872356:+ INFRAME NA TCGA-56-A4BY-01A-11R-A24H-07 ERBB2-TCAP 13 91 chr17:39716605:+ chr17:39665716:+ INFRAME NA TCGA-56-A4BY-01A-11R-A24H-07 TNRC6C-PHACTR1 1 5 chr17:78005079:+ chr6:13287063:+ FRAMESHIFT NA TCGA-56-A4BY-01A-11R-A24H-07 MBD4-TMCC1 1 2 chr3:129432503:- chr3:129671264:- INFRAME NA TCGA-56-A4ZK-01A-11R-A262-07 PCID2-ATP4B 644 1567 chr13:113208599:- chr13:113654942:- FRAMESHIFT NA TCGA-56-A4ZK-01A-11R-A262-07 CUL4A-TMEM255B 19 106 chr13:113243045:+ chr13:113799339:+ INFRAME NA TCGA-56-A4ZK-01A-11R-A262-07 PDIA5-OR7E29P 19 31 chr3:123092442:+ chr3:125712183:+ . NA TCGA-56-A4ZK-01A-11R-A262-07 LPCAT4-MTMR10 3 42 chr15:34361206:- chr15:30939493:- . NA TCGA-56-A4ZK-01A-11R-A262-07 SEC22A-TXNRD3 5 34 chr3:123225297:+ chr3:126634051:- INFRAME NA TCGA-56-A4ZK-01A-11R-A262-07 CHAMP1-UNC79 1 20 chr13:114314643:+ chr14:93637216:+ . NA TCGA-56-A4ZK-01A-11R-A262-07 SMYD2-PGBD2 3 8 chr1:214281427:+ chr1:248913816:+ . NA TCGA-56-A4ZK-01A-11R-A262-07 TMUB1-AGAP3 3 8 chr7:151082175:- chr7:151128580:+ FRAMESHIFT NA TCGA-56-A4ZK-01A-11R-A262-07 TFDP1-ATP4B 2 7 chr13:113611062:+ chr13:113654942:- INFRAME NA TCGA-56-A4ZK-01A-11R-A262-07 PCID2-GRTP1 1 2 chr13:113208599:- chr13:113363910:- FRAMESHIFT NA TCGA-56-A4ZK-01A-11R-A262-07 MCF2L-F10 1000 1000 chr13:113066170:+ chr13:113148916:+ FRAMESHIFT NA TCGA-56-A62T-01A-11R-A405-07 KMT2D-DDX23 7 11 chr12:49024578:- chr12:48845782:- FRAMESHIFT Likely Oncogenic NA TCGA-58-8386-01A-11R-2296-07 MRC2-VMP1 36 165 chr17:62674170:+ chr17:59839768:+ INFRAME NA TCGA-58-8386-01A-11R-2296-07 RAPGEF1-MCU 3 12 chr9:131739770:- chr10:72834359:+ FRAMESHIFT NA TCGA-58-8386-01A-11R-2296-07 RAB11FIP3-RGS11 1 19 chr16:491268:+ chr16:275498:- FRAMESHIFT NA TCGA-58-8388-01A-11R-2326-07 SEC61A2-CAMK1D 3 12 chr10:12136170:+ chr10:12760948:+ FRAMESHIFT NA TCGA-58-8391-01A-11R-2326-07 ERBB2-CTTN 1 3 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-58-A46K-01A-11R-A24H-07 PGD-NTSR1 7 60 chr1:10399704:+ chr20:62754685:+ INFRAME NA TCGA-58-A46K-01A-11R-A24H-07 MREG-ARL4D 1 10 chr2:215996306:- chr17:43399661:+ . NA TCGA-58-A46K-01A-11R-A24H-07 NCKAP5L-PRKAG1 1 6 chr12:49828322:- chr12:49013110:- . NA TCGA-58-A46L-01A-11R-A24H-07 DPM1-PSMD10P1 3 8 chr20:50955186:- chr20:50913775:+ . NA TCGA-58-A46L-01A-11R-A24H-07 C3orf52-CD86 1 7 chr3:112102965:+ chr3:122118048:+ FRAMESHIFT NA TCGA-58-A46L-01A-11R-A24H-07 YEATS2-ABCC5 1 1 chr3:183762279:+ chr3:184001251:- INFRAME NA TCGA-60-2695-01A-01R-0851-07 RB1-CNIH3 14 49 chr13:48307406:+ chr1:224680958:+ INFRAME Likely Oncogenic NA TCGA-60-2695-01A-01R-0851-07 CBX1-HOXB8 1 11 chr17:48101268:- chr17:48613506:- . NA TCGA-60-2695-01A-01R-0851-07 MSI2-AKAP1 1 9 chr17:57529724:+ chr17:57105441:+ . NA TCGA-60-2698-01A-01R-0851-07 MED20-TLL2 5 26 chr6:41916785:- chr10:96480459:- INFRAME NA TCGA-60-2703-01A-11R-2045-07 ZSWIM4-CCDC130 1 9 chr19:13819492:+ chr19:13754289:+ FRAMESHIFT NA TCGA-60-2703-01A-11R-2045-07 COL1A1-BGN 2 4 chr17:50191788:- chrX:153505863:+ INFRAME NA TCGA-60-2704-01A-11R-2045-07 DCBLD2-KALRN 2 3 chr3:98849461:- chr3:124474663:+ FRAMESHIFT NA TCGA-60-2706-01A-01R-0851-07 PCNX1-TTC9 4 30 chr14:70908003:+ chr14:70667564:+ FRAMESHIFT NA TCGA-60-2706-01A-01R-0851-07 FOXO1-ELF1 6 13 chr13:40665583:- chr13:40959016:- INFRAME NA TCGA-60-2706-01A-01R-0851-07 MSH6-TEKT4P2 6 11 chr2:47783493:+ chr21:9127547:- . Likely Oncogenic NA TCGA-60-2706-01A-01R-0851-07 RBM12B-RSPO2 2 26 chr8:93740629:- chr8:107989244:- . NA TCGA-60-2706-01A-01R-0851-07 ZNF557-SIGLECL1 4 13 chr19:7076507:+ chr19:51268571:+ FRAMESHIFT NA TCGA-60-2706-01A-01R-0851-07 ABRACL-MAP3K5 3 13 chr6:139028875:+ chr6:136720589:- . NA TCGA-60-2706-01A-01R-0851-07 TRIM65-SRP68 3 8 chr17:75891813:- chr17:76057543:- FRAMESHIFT NA TCGA-60-2706-01A-01R-0851-07 RNF19A-TRIQK 3 7 chr8:100287501:- chr8:92917010:- . NA TCGA-60-2706-01A-01R-0851-07 PSMD11-RHOT1 2 9 chr17:32454619:+ chr17:32253085:+ FRAMESHIFT NA TCGA-60-2706-01A-01R-0851-07 TPX2-EYS 2 5 chr20:31760179:+ chr6:64082002:- INFRAME NA TCGA-60-2706-01A-01R-0851-07 ERP29-NHSL1 1 5 chr12:112013609:+ chr6:138572061:- . NA TCGA-60-2706-01A-01R-0851-07 ZNF557-ZNF714 1000 1000 chr19:7076506:+ chr19:21083977:+ . NA TCGA-60-2708-01A-01R-0851-07 SLC20A2-ZMAT4 28 83 chr8:42501031:- chr8:40532238:- . NA TCGA-60-2708-01A-01R-0851-07 DERA-MGST1 6 3 chr12:15962947:+ chr12:16589528:+ . NA TCGA-60-2709-01A-21R-1820-07 SMC1A-UBQLN2 8 43 chrX:53404992:- chrX:56564789:+ . NA TCGA-60-2709-01A-21R-1820-07 FARP1-GPC6 2 2 chr13:98385814:+ chr13:93830154:+ FRAMESHIFT NA TCGA-60-2710-01A-01R-0851-07 ECT2-KALRN 8 23 chr3:172774022:+ chr3:124347143:+ INFRAME NA TCGA-60-2710-01A-01R-0851-07 OXSR1-SLC22A14 1 15 chr3:38165946:+ chr3:38306304:+ INFRAME NA TCGA-60-2710-01A-01R-0851-07 ME1-UBE3D 1 12 chr6:83346173:- chr6:82893042:- INFRAME NA TCGA-60-2711-01A-01R-0851-07 RABEP1-RPAIN 10 30 chr17:5308822:+ chr17:5421296:+ FRAMESHIFT NA TCGA-60-2711-01A-01R-0851-07 PPM1L-B3GNT5 3 15 chr3:160756707:+ chr3:183287605:+ . NA TCGA-60-2711-01A-01R-0851-07 DST-TRIM38 1 15 chr6:56843055:- chr6:25963049:+ . NA TCGA-60-2713-01A-01R-0851-07 OSCP1-SOX2-OT 19 130 chr1:36432422:- chr3:181715185:+ . NA TCGA-60-2713-01A-01R-0851-07 OSCP1-SOX2OT_exon4 19 44 chr1:36432422:- chr3:181715185:+ . NA TCGA-60-2713-01A-01R-0851-07 RNF41-ANKRD52 1 2 chr12:56213958:- chr12:56245596:- INFRAME NA TCGA-60-2714-01A-01R-0851-07 CREBBP-HCN1 4 64 chr16:3850297:- chr5:45645608:- FRAMESHIFT Likely Oncogenic NA TCGA-60-2714-01A-01R-0851-07 SLC20A2-FBXW7 1 14 chr8:42540915:- chr4:152326231:- . Likely Oncogenic NA TCGA-60-2714-01A-01R-0851-07 SEC31A-SCD5 2 2 chr4:82874611:- chr4:82705413:- FRAMESHIFT NA TCGA-60-2716-01A-01R-0851-07 NSD3-NUTM1 41 160 chr8:38326730:- chr15:34347969:+ INFRAME NA TCGA-60-2719-01A-01R-0851-07 PELP1-CHRNE 1 11 chr17:4676357:- chr17:4902763:- INFRAME NA TCGA-60-2720-01A-01R-0851-07 DNMBP-TPTE2 5 11 chr10:100009838:- chr13:19438153:- . NA TCGA-60-2721-01A-01R-0851-07 BSDC1-HDAC1 55 129 chr1:32368447:- chr1:32331474:+ FRAMESHIFT NA TCGA-60-2721-01A-01R-0851-07 PNRC2-BSDC1 5 66 chr1:23961134:+ chr1:32376741:- FRAMESHIFT NA TCGA-60-2721-01A-01R-0851-07 MBOAT7-TARM1 1 1 chr19:54178765:- chr19:54070160:- FRAMESHIFT NA TCGA-60-2722-01A-01R-0851-07 KIAA0100-ALKBH5 18 198 chr17:28643610:- chr17:18206815:+ INFRAME NA TCGA-60-2722-01A-01R-0851-07 ARL4D-DNAJC7 3 10 chr17:43399093:+ chr17:41983636:- . NA TCGA-60-2722-01A-01R-0851-07 KCNQ5-DST 2 6 chr6:72622587:+ chr6:56477488:- FRAMESHIFT NA TCGA-60-2722-01A-01R-0851-07 GNA13-CCDC171 2 4 chr17:65053502:- chr9:15846702:+ INFRAME NA TCGA-60-2722-01A-01R-0851-07 ITGB4-OTOP2 1 8 chr17:75721563:+ chr17:74930279:+ . NA TCGA-60-2723-01A-01R-0851-07 THTPA-IGHJ5 12 0 chr14:23556470:+ chr14:105863860:- . NA TCGA-60-2723-01A-01R-0851-07 PPM1H-TSPAN8 1 3 chr12:62934492:- chr12:71441587:- . NA TCGA-60-2724-01A-01R-0851-07 RABEP1-PIGL 4 8 chr17:5354490:+ chr17:16299888:+ FRAMESHIFT NA TCGA-60-2724-01A-01R-0851-07 TAOK3-VSIG10 4 8 chr12:118372648:- chr12:118082429:- . NA TCGA-60-2725-01A-01R-1201-07 WARS2-PHGDH 2 11 chr1:119076350:- chr1:119721170:+ INFRAME NA TCGA-60-2726-01A-01R-0851-07 REL-MAN1A2 2 9 chr2:60920642:+ chr1:117493147:+ INFRAME NA TCGA-63-5128-01A-01R-1443-07 RNASEH2A-BEST2 10 49 chr19:12807506:+ chr19:12757651:+ FRAMESHIFT NA TCGA-63-5131-01A-01R-1443-07 CSMD1-C15orf41 27 80 chr8:4994332:- chr15:36808324:+ FRAMESHIFT NA TCGA-63-5131-01A-01R-1443-07 SPSB1-RANBP1 7 27 chr1:9368196:+ chr22:20127156:+ . NA TCGA-63-5131-01A-01R-1443-07 OXCT1-TMEM17 2 6 chr5:41870281:- chr2:62502794:- FRAMESHIFT NA TCGA-63-5131-01A-01R-1443-07 UQCR10-KALRN 1 4 chr22:29767548:+ chr3:124413470:+ INFRAME NA TCGA-63-6202-01A-11R-1820-07 HECTD4-BRAP 12 54 chr12:112162283:- chr12:111642692:- . NA TCGA-63-6202-01A-11R-1820-07 ZBTB40-TCEA3 5 58 chr1:22452004:+ chr1:23397955:- . NA TCGA-63-6202-01A-11R-1820-07 BAZ1A-RNF115 7 30 chr14:34874492:- chr1:145788966:- FRAMESHIFT NA TCGA-63-7021-01A-11R-1949-07 EXOC6-FFAR4 2 36 chr10:92834824:+ chr10:93587220:+ FRAMESHIFT NA TCGA-63-7021-01A-11R-1949-07 KIF11-FFAR4 2 9 chr10:92639900:+ chr10:93587220:+ FRAMESHIFT NA TCGA-63-7021-01A-11R-1949-07 YES1-METTL4 1 2 chr18:751705:- chr18:2567654:- . NA TCGA-63-7022-01A-11R-1949-07 HGSNAT-GPAT4 3 10 chr8:43169242:+ chr8:41609416:+ INFRAME NA TCGA-63-7022-01A-11R-1949-07 ERG-MAPK11 3 3 chr21:38575662:- chr22:50267949:- FRAMESHIFT Likely Oncogenic NA TCGA-63-7023-01A-11R-1949-07 BCAS3-MARCH10 19 99 chr17:60947352:+ chr17:62760006:- INFRAME NA TCGA-63-7023-01A-11R-1949-07 PARK2-LANCL1 1 3 chr6:162727662:- chr2:210472076:- FRAMESHIFT NA TCGA-63-A5M9-01A-11R-A26W-07 CTTN-MRGPRF 11 63 chr11:70409960:+ chr11:69009957:- . NA TCGA-63-A5M9-01A-11R-A26W-07 ITGA2-CEACAM21 14 36 chr5:53083453:+ chr19:41577200:+ FRAMESHIFT NA TCGA-63-A5M9-01A-11R-A26W-07 PPFIA1-TESMIN 6 27 chr11:70362488:+ chr11:68738788:- INFRAME NA TCGA-63-A5M9-01A-11R-A26W-07 TPCN2-MRPL21 3 20 chr11:69073001:+ chr11:68900605:- FRAMESHIFT NA TCGA-63-A5M9-01A-11R-A26W-07 MED12L-GOLIM4 2 12 chr3:151193666:+ chr3:168025095:- INFRAME NA TCGA-63-A5M9-01A-11R-A26W-07 CPT1A-MRPL21 2 6 chr11:68781771:- chr11:68900605:- FRAMESHIFT NA TCGA-63-A5MB-01A-11R-A26W-07 SNHG3-ADAM23 3 11 chr1:28510104:+ chr2:206573121:+ . NA TCGA-63-A5MB-01A-11R-A26W-07 RCC1-ADAM23 3 7 chr1:28510104:+ chr2:206573121:+ . NA TCGA-63-A5MB-01A-11R-A26W-07 KCNQ3-LRRC6 1 5 chr8:132480147:- chr8:132583779:- INFRAME NA TCGA-63-A5MB-01A-11R-A26W-07 CCDC94-ANKRD24 1 3 chr19:4262114:+ chr19:4212475:+ INFRAME NA TCGA-63-A5MG-01A-12R-A27Q-07 LMTK2-IMMP2L 4 6 chr7:98171674:+ chr7:110963565:- INFRAME NA TCGA-63-A5MH-01A-12R-A27Q-07 PEX14-PRG4 5 31 chr1:10495321:+ chr1:186312769:+ FRAMESHIFT NA TCGA-63-A5MH-01A-12R-A27Q-07 ECHDC1-MYO6 3 22 chr6:127330910:- chr6:75890058:+ FRAMESHIFT NA TCGA-63-A5MH-01A-12R-A27Q-07 PDCD2L-KIAA0355 1 8 chr19:34404990:+ chr19:34352647:+ INFRAME NA TCGA-63-A5MI-01A-12R-A27Q-07 POLR3K-EMC10 2 9 chr16:53476:- chr19:50477929:+ INFRAME NA TCGA-63-A5MI-01A-12R-A27Q-07 GHR-C6 1 8 chr5:42424598:+ chr5:41203250:- . NA TCGA-63-A5MI-01A-12R-A27Q-07 TIMM8A-TRPC5 1000 1000 chrX:101348533:- chrX:111782138:- INFRAME NA TCGA-63-A5MJ-01A-11R-A27Q-07 PVT1-RGS20 90 535 chr8:127794734:+ chr8:53913497:+ . NA TCGA-63-A5MJ-01A-11R-A27Q-07 FAT1-IRF2 35 136 chr4:186609183:- chr4:184429070:- . Likely Oncogenic NA TCGA-63-A5MJ-01A-11R-A27Q-07 MIR1204-RGS20 9 47 chr8:127796008:+ chr8:53913497:+ . NA TCGA-63-A5MJ-01A-11R-A27Q-07 TIAM1-NRP2 3 3 chr21:31558927:- chr2:205683091:+ . NA TCGA-63-A5ML-01A-31R-A27Q-07 FKBP10-JUP 14 58 chr17:41820714:+ chr17:41754863:- . NA TCGA-63-A5ML-01A-31R-A27Q-07 EML1-ADAMDEC1 5 6 chr14:99793543:+ chr8:24384459:+ . NA TCGA-63-A5ML-01A-31R-A27Q-07 AP4S1-HEATR5A 1 3 chr14:31080644:+ chr14:31309182:- FRAMESHIFT NA TCGA-63-A5MM-01A-11R-A26W-07 DCTN3-LINGO2 5 30 chr9:34618676:- chr9:28670280:- . NA TCGA-63-A5MM-01A-11R-A26W-07 MTAP-EEF1A2 3 31 chr9:21802781:+ chr20:63496035:- INFRAME NA TCGA-63-A5MM-01A-11R-A26W-07 FOCAD-ELAVL2 2 14 chr9:20823115:+ chr9:23762249:- INFRAME NA TCGA-63-A5MN-01A-22R-A27Q-07 YWHAE-MYH3 8 25 chr17:1400047:- chr17:10630458:- FRAMESHIFT NA TCGA-63-A5MN-01A-22R-A27Q-07 SLC38A10-SEZ6 1 5 chr17:81270918:- chr17:28969952:- INFRAME NA TCGA-63-A5MP-01A-11R-A26W-07 THSD4-WARS 40 172 chr15:71547481:+ chr14:100337202:- INFRAME NA TCGA-63-A5MP-01A-11R-A26W-07 SMAD4-NRG1 7 18 chr18:51030623:+ chr8:32727949:+ . Likely Oncogenic NA TCGA-63-A5MP-01A-11R-A26W-07 LSG1-EIF2B5 4 29 chr3:194650890:- chr3:184144884:+ INFRAME NA TCGA-63-A5MP-01A-11R-A26W-07 DLGAP1-LRRC23 3 13 chr18:4455006:- chr12:6883704:+ . NA TCGA-63-A5MP-01A-11R-A26W-07 DLGAP1-RPL13P5 3 13 chr18:4455006:- chr12:6883704:+ . NA TCGA-63-A5MP-01A-11R-A26W-07 THAP7-NRG1 1 18 chr22:21000647:- chr8:32595828:+ FRAMESHIFT NA TCGA-63-A5MP-01A-11R-A26W-07 ARNTL2-STK38L 1 2 chr12:27333103:+ chr12:27297710:+ . NA TCGA-63-A5MR-01A-31R-A27Q-07 LYSMD2-SCG3 4 10 chr15:51737350:- chr15:51719408:+ FRAMESHIFT NA TCGA-63-A5MT-01A-21R-A26W-07 MSL2-OPRM1 1 8 chr3:136194972:- chr6:154089826:+ FRAMESHIFT NA TCGA-63-A5MT-01A-21R-A26W-07 ROCK1-CAMK2B 1 3 chr18:21039472:- chr7:44284225:- FRAMESHIFT NA TCGA-63-A5MV-01A-21R-A26W-07 FXR1-FGF10 24 36 chr3:180912736:+ chr5:44389056:- . NA TCGA-63-A5MV-01A-21R-A26W-07 ATP11B-TPRG1 8 20 chr3:182848557:+ chr3:189023750:+ . NA TCGA-63-A5MV-01A-21R-A26W-07 POMK-ST6GAL1 3 10 chr8:43103830:+ chr3:186963785:+ . NA TCGA-63-A5MV-01A-21R-A26W-07 OAZ2-FAM96A 3 3 chr15:64703029:- chr15:64073028:- FRAMESHIFT NA TCGA-63-A5MV-01A-21R-A26W-07 SMU1-AFAP1 1 7 chr9:33068824:- chr4:7872080:- . NA TCGA-63-A5MV-01A-21R-A26W-07 USP9X-NXF2 1 6 chrX:41086109:+ chrX:102307026:+ . NA TCGA-63-A5MW-01A-11R-A26W-07 BOC-SIDT1 10 83 chr3:113278783:+ chr3:113601588:+ INFRAME NA TCGA-63-A5MW-01A-11R-A26W-07 NIPBL-STK24 12 38 chr5:36877178:+ chr13:98519473:- . NA TCGA-63-A5MW-01A-11R-A26W-07 SLC44A1-FSD1L 7 29 chr9:105335699:+ chr9:105546358:+ FRAMESHIFT NA TCGA-63-A5MW-01A-11R-A26W-07 TSPAN9-TTC38 2 36 chr12:3083719:+ chr22:46292791:+ . NA TCGA-63-A5MW-01A-11R-A26W-07 EIF2S1-PLEKHH1 6 12 chr14:67376590:+ chr14:67559608:+ FRAMESHIFT NA TCGA-63-A5MW-01A-11R-A26W-07 RAB30-CCDC90B 4 8 chr11:83071691:- chr11:83265979:- . NA TCGA-63-A5MW-01A-11R-A26W-07 TMEM126A-EED 2 13 chr11:85648089:+ chr11:86250296:+ . NA TCGA-63-A5MW-01A-11R-A26W-07 ZNRF3-EWSR1 4 1 chr22:28884066:+ chr22:29278030:+ FRAMESHIFT Likely Oncogenic NA TCGA-63-A5MW-01A-11R-A26W-07 PHC3-IFT122 2 1 chr3:170145423:- chr3:129463560:+ INFRAME NA TCGA-63-A5MW-01A-11R-A26W-07 DISC1FP1-SPON1 1 2 chr11:90546895:+ chr11:13982847:+ . NA TCGA-63-A5MY-01A-11R-A26W-07 PDE4D-KHDRBS3 31 92 chr5:59180595:- chr8:135521237:+ INFRAME NA TCGA-63-A5MY-01A-11R-A26W-07 RNF180-GPX8 3 10 chr5:64217396:+ chr5:55164055:+ INFRAME NA TCGA-63-A5MY-01A-11R-A26W-07 TXN2-MYH9 3 6 chr22:36480575:- chr22:36349255:- . NA TCGA-66-2727-01A-01R-0980-07 CASP8-TTLL7 9 76 chr2:201234112:+ chr1:83870082:- . Likely Oncogenic NA TCGA-66-2727-01A-01R-0980-07 TCTA-DSCR3 4 6 chr3:49412640:+ chr21:37240639:- FRAMESHIFT NA TCGA-66-2727-01A-01R-0980-07 SAP30BP-TSEN54 1 13 chr17:75671863:+ chr17:75516746:+ FRAMESHIFT NA TCGA-66-2727-01A-01R-0980-07 GNB1L-CTSC 2 5 chr22:19802001:- chr11:88300645:- FRAMESHIFT NA TCGA-66-2727-01A-01R-0980-07 KPNA4-ATR 1 4 chr3:160565214:- chr3:142568154:- FRAMESHIFT Likely Oncogenic NA TCGA-66-2742-01A-01R-0980-07 PHLDB2-RIMS2 4 18 chr3:111732703:+ chr8:104148607:+ . NA TCGA-66-2742-01A-01R-0980-07 PLCXD2-RIMS2 4 18 chr3:111732703:+ chr8:104148607:+ . NA TCGA-66-2742-01A-01R-0980-07 ANKRD27-ZFP14 1 16 chr19:32643123:- chr19:36341590:- FRAMESHIFT NA TCGA-66-2744-01A-01R-0980-07 ZMYM2-DMRT2 2 12 chr13:20036909:+ chr9:1051570:+ . NA TCGA-66-2744-01A-01R-0980-07 SBF2-EIF4G2 2 5 chr11:10294015:- chr11:10807381:- . NA TCGA-66-2754-01A-01R-0980-07 NCALD-NSMCE2 27 97 chr8:101790862:- chr8:125357219:+ . NA TCGA-66-2754-01A-01R-0980-07 RAD51D-SLCO6A1 3 13 chr17:35106386:- chr5:102413143:- FRAMESHIFT Likely Oncogenic NA TCGA-66-2754-01A-01R-0980-07 RAD51L3-RFFL-SLCO6A1 3 7 chr17:35106386:- chr5:102413143:- FRAMESHIFT Likely Oncogenic NA TCGA-66-2754-01A-01R-0980-07 PIP5K1A-SLC20A2 1 6 chr1:151199081:+ chr8:42472654:- . NA TCGA-66-2754-01A-01R-0980-07 MBP-AEBP2 1 2 chr18:77066298:- chr12:19552853:+ FRAMESHIFT NA TCGA-66-2754-01A-01R-0980-07 CSTF3-HSP90AA1 1 1 chr11:33141667:- chr14:102081821:- FRAMESHIFT NA TCGA-66-2755-01A-01R-0851-07 ABL1-KYAT1 1 8 chr9:130714455:+ chr9:128845411:- FRAMESHIFT Likely Oncogenic NA TCGA-66-2756-01A-01R-0851-07 RPS20-LYN 221 900 chr8:56073178:- chr8:56013588:+ . NA TCGA-66-2756-01A-01R-0851-07 PIK3CB-BFSP2 66 172 chr3:138733361:- chr3:133466828:+ INFRAME Likely Oncogenic NA TCGA-66-2756-01A-01R-0851-07 ACYP2-PPP1CB 23 65 chr2:53973810:+ chr2:28781738:+ FRAMESHIFT NA TCGA-66-2756-01A-01R-0851-07 CCP110-GOLPH3L 10 62 chr16:19528022:+ chr1:150648748:- FRAMESHIFT NA TCGA-66-2756-01A-01R-0851-07 CDC25A-SPINK8 6 52 chr3:48164307:- chr3:48309946:- INFRAME NA TCGA-66-2756-01A-01R-0851-07 RTN4-MITD1 9 37 chr2:55049745:- chr2:99174016:- INFRAME NA TCGA-66-2756-01A-01R-0851-07 PAK2-ECE2 5 24 chr3:196740157:+ chr3:184257473:+ . NA TCGA-66-2756-01A-01R-0851-07 UBR1-TGM5 5 17 chr15:42983897:- chr15:43235837:- INFRAME NA TCGA-66-2756-01A-01R-0851-07 DISP2-PHGR1 4 16 chr15:40358440:+ chr15:40356073:+ FRAMESHIFT NA TCGA-66-2756-01A-01R-0851-07 THADA-EML4 1 23 chr2:43344122:- chr2:42328886:+ FRAMESHIFT NA TCGA-66-2756-01A-01R-0851-07 PDIA4-SCHIP1 5 5 chr7:149028321:- chr3:159866163:+ FRAMESHIFT NA TCGA-66-2756-01A-01R-0851-07 PLAA-RUSC2 2 17 chr9:26946897:- chr9:35546430:+ . NA TCGA-66-2756-01A-01R-0851-07 TANGO6-CLEC2L 5 2 chr16:69040421:+ chr7:139536274:+ FRAMESHIFT NA TCGA-66-2756-01A-01R-0851-07 ESYT3-RPN1 2 6 chr3:138435125:+ chr3:128644983:- INFRAME NA TCGA-66-2756-01A-01R-0851-07 PNMA5-BCAP31 2 6 chrX:152991916:- chrX:153700975:- . NA TCGA-66-2758-01A-02R-0851-07 AP2A2-PSMD13 62 593 chr11:977224:+ chr11:252505:+ INFRAME NA TCGA-66-2758-01A-02R-0851-07 BTBD1-MRPL46 43 253 chr15:83056389:- chr15:88465773:- INFRAME NA TCGA-66-2758-01A-02R-0851-07 SERINC2-ZCCHC17 10 232 chr1:31429538:+ chr1:31364032:+ INFRAME NA TCGA-66-2758-01A-02R-0851-07 ZNF664-DDX55 10 74 chr12:123988138:+ chr12:123619432:+ . NA TCGA-66-2758-01A-02R-0851-07 RFLNA-DDX55 7 46 chr12:123988138:+ chr12:123619432:+ . NA TCGA-66-2758-01A-02R-0851-07 KIAA0100-SEZ6 5 38 chr17:28618791:- chr17:28969952:- INFRAME NA TCGA-66-2758-01A-02R-0851-07 SMARCA4-ZNF791 8 18 chr19:10996544:+ chr19:12633591:+ . Likely Oncogenic NA TCGA-66-2758-01A-02R-0851-07 TMEM45A-CMSS1 1 26 chr3:100519608:+ chr3:100146973:+ FRAMESHIFT NA TCGA-66-2758-01A-02R-0851-07 SPIN1-FUT9 6 5 chr9:88388538:+ chr6:96114039:+ . NA TCGA-66-2758-01A-02R-0851-07 STX12-TMEM222 4 7 chr1:27789631:+ chr1:27330720:+ INFRAME NA TCGA-66-2758-01A-02R-0851-07 AKAP13-CHD2 1 12 chr15:85533880:+ chr15:93012345:+ FRAMESHIFT NA TCGA-66-2759-01A-01R-0851-07 LATS1-LACE1 18 112 chr6:149717849:- chr6:108401996:+ FRAMESHIFT Likely Oncogenic NA TCGA-66-2759-01A-01R-0851-07 EGLN2-PLD3 15 54 chr19:40801415:+ chr19:40371673:+ INFRAME NA TCGA-66-2759-01A-01R-0851-07 WASF2-FGR 3 70 chr1:27489986:- chr1:27625151:- . NA TCGA-66-2759-01A-01R-0851-07 MAP3K5-NKAIN2 4 23 chr6:136720450:- chr6:124791339:+ INFRAME NA TCGA-66-2759-01A-01R-0851-07 SYMPK-ZNF573 3 26 chr19:45827510:- chr19:37740194:- FRAMESHIFT NA TCGA-66-2759-01A-01R-0851-07 TMEM242-GTF2H5 3 10 chr6:157318782:- chr6:158170470:+ . NA TCGA-66-2759-01A-01R-0851-07 IFT74-WNK2 3 6 chr9:26962087:+ chr9:93317520:+ INFRAME NA TCGA-66-2759-01A-01R-0851-07 SESN1-EYS 2 8 chr6:109093795:- chr6:63788249:- INFRAME NA TCGA-66-2759-01A-01R-0851-07 AKR1C3-AKR1E2 1 4 chr10:5102650:+ chr10:4835675:+ INFRAME NA TCGA-66-2759-01A-01R-0851-07 NADSYN1-KRTAP5-10 1000 1000 chr11:71521204:+ chr11:71566120:+ . NA TCGA-66-2763-01A-01R-0851-07 DCAF5-ERH 3 26 chr14:69089948:- chr14:69394912:- . NA TCGA-66-2763-01A-01R-0851-07 EXOSC7-ZDHHC3 1 1 chr3:44976334:+ chr3:44933984:- FRAMESHIFT NA TCGA-66-2763-01A-01R-0851-07 NSD3-LSM1 1000 1000 chr8:38295796:- chr8:38169917:- FRAMESHIFT NA TCGA-66-2765-01A-01R-0851-07 WASF2-FAM65B 14 17 chr1:27428761:- chr6:24875817:- INFRAME NA TCGA-66-2766-01A-01R-0851-07 GMPS-PQLC2L 117 825 chr3:155870897:+ chr3:157553230:+ . NA TCGA-66-2766-01A-01R-0851-07 STK3-SULT1A3 17 29 chr8:98706467:- chr16:30202690:+ INFRAME NA TCGA-66-2766-01A-01R-0851-07 SFMBT2-AKR1C4 3 26 chr10:7367649:- chr10:5195465:+ . NA TCGA-66-2766-01A-01R-0851-07 HCK-CCM2L 1 18 chr20:32052486:+ chr20:32031001:+ FRAMESHIFT NA TCGA-66-2766-01A-01R-0851-07 STIM1-VHL 1 16 chr11:3856409:+ chr3:10149787:+ INFRAME Likely Oncogenic NA TCGA-66-2766-01A-01R-0851-07 NFATC3-SLC7A6 3 5 chr16:68183366:+ chr16:68294705:+ FRAMESHIFT NA TCGA-66-2766-01A-01R-0851-07 ESCO1-LAMA3 1 12 chr18:21560859:- chr18:23773497:+ INFRAME NA TCGA-66-2766-01A-01R-0851-07 ALDH3A1-ULK2 2 5 chr17:19739508:- chr17:19771067:- . NA TCGA-66-2766-01A-01R-0851-07 STK3-SULT1A4 1000 1000 chr8:98706467:- chr16:29463345:+ INFRAME NA TCGA-66-2767-01A-01R-0851-07 CTBP1-IGHJ6 14 0 chr4:1235595:- chr14:105863246:- . NA TCGA-66-2768-01A-01R-0851-07 TUBD1-PTRH2 4 20 chr17:59886083:- chr17:59697978:- FRAMESHIFT NA TCGA-66-2768-01A-01R-0851-07 DIAPH1-CYSTM1 5 12 chr5:141618798:- chr5:140243305:+ FRAMESHIFT NA TCGA-66-2769-01A-02R-0851-07 ABR-GAS7 11 15 chr17:1179667:- chr17:10019897:- FRAMESHIFT NA TCGA-66-2769-01A-02R-0851-07 SCRN1-WDR53 2 12 chr7:29989642:- chr3:196554807:- . NA TCGA-66-2770-01A-01R-0851-07 SUN1-ICA1 1 11 chr7:853618:+ chr7:8236005:- . NA TCGA-66-2771-01A-01R-0980-07 EFNA3-FLAD1 8 21 chr1:155079069:+ chr1:154992713:+ FRAMESHIFT NA TCGA-66-2771-01A-01R-0980-07 CLPTM1-CEACAM16 3 22 chr19:44963761:+ chr19:44710496:+ . NA TCGA-66-2771-01A-01R-0980-07 EFNA4-FLAD1 3 7 chr1:155067440:+ chr1:154992713:+ FRAMESHIFT NA TCGA-66-2771-01A-01R-0980-07 ATG13-AMBRA1 3 6 chr11:46650317:+ chr11:46548500:- . NA TCGA-66-2771-01A-01R-0980-07 ATP1B3-GRK7 1 9 chr3:141876910:+ chr3:141780374:+ FRAMESHIFT NA TCGA-66-2771-01A-01R-0980-07 SMARCA4-C19orf38 2 4 chr19:10991323:+ chr19:10869218:+ INFRAME Likely Oncogenic NA TCGA-66-2771-01A-01R-0980-07 CNOT9-WNT6 1 5 chr2:218587695:+ chr2:218871027:+ FRAMESHIFT NA TCGA-66-2773-01A-01R-1201-07 ZNF625-SCAMP4 2 23 chr19:12156556:- chr19:1914979:+ . NA TCGA-66-2781-01A-01R-0851-07 ALDH18A1-PDLIM1 19 108 chr10:95656597:- chr10:95271784:- . NA TCGA-66-2781-01A-01R-0851-07 ROBO1-MED12L 2 2 chr3:78938601:- chr3:151193490:+ FRAMESHIFT NA TCGA-66-2782-01A-01R-0851-07 CDC42EP4-SEPT10 10 44 chr17:73311893:- chr2:109593119:- . NA TCGA-66-2782-01A-01R-0851-07 CISD1-GABRA1 8 26 chr10:58269304:+ chr5:161895666:+ INFRAME NA TCGA-66-2783-01A-01R-1201-07 MSI2-ICAM2 135 364 chr17:57627303:+ chr17:64003964:- INFRAME NA TCGA-66-2783-01A-01R-1201-07 SYNGR2-MSI2 28 231 chr17:78171054:+ chr17:57401379:+ FRAMESHIFT NA TCGA-66-2783-01A-01R-1201-07 CSNK1D-SCPEP1 26 125 chr17:82273306:- chr17:56995507:+ FRAMESHIFT NA TCGA-66-2783-01A-01R-1201-07 VEZF1-DDX42 16 72 chr17:57988079:- chr17:63787034:+ . NA TCGA-66-2783-01A-01R-1201-07 SEC14L1-SPOP 1 16 chr17:77093347:+ chr17:49622876:- . Likely Oncogenic NA TCGA-66-2783-01A-01R-1201-07 SNHG20-SPOP 1 16 chr17:77093347:+ chr17:49622876:- . Likely Oncogenic NA TCGA-66-2783-01A-01R-1201-07 NFE2L1-LRRC46 1 11 chr17:48051628:+ chr17:47834425:+ FRAMESHIFT NA TCGA-66-2783-01A-01R-1201-07 GAPDH-ACTB 1 6 chr12:6534569:+ chr7:5529663:- . NA TCGA-66-2785-01A-01R-0851-07 MROH1-TCTEX1D2 18 49 chr8:144163848:+ chr3:196316231:- FRAMESHIFT NA TCGA-66-2785-01A-01R-0851-07 FRMD4B-PPP2R3A 1 7 chr3:69221858:- chr3:136145043:+ INFRAME NA TCGA-66-2786-01A-01R-0851-07 CHD8-TOX4 1 3 chr14:21399602:- chr14:21487451:+ INFRAME NA TCGA-66-2787-01A-01R-0980-07 SGCB-SPATA18 2 4 chr4:52033431:- chr4:52060419:+ INFRAME NA TCGA-66-2787-01A-01R-0980-07 LMAN2L-FER1L5 1 6 chr2:96733519:- chr2:96704468:+ INFRAME NA TCGA-66-2787-01A-01R-0980-07 TFG-CD46 1 1 chr3:100728858:+ chr1:207767779:+ INFRAME NA TCGA-66-2788-01A-01R-0980-07 BAP1-IGHJ3 37 0 chr3:52409937:- chr14:105864630:- . Likely Oncogenic NA TCGA-66-2788-01A-01R-0980-07 ATG5-SYNJ2 5 34 chr6:106316101:- chr6:158081109:+ INFRAME NA TCGA-66-2788-01A-01R-0980-07 RPTOR-STXBP4 3 7 chr17:80908929:+ chr17:55078078:+ INFRAME NA TCGA-66-2788-01A-01R-0980-07 EPB41L2-LAMA2 1 4 chr6:130926605:- chr6:129383122:+ INFRAME NA TCGA-66-2789-01A-01R-0980-07 TM9SF4-HM13 21 130 chr20:32160111:+ chr20:31566210:+ INFRAME NA TCGA-66-2789-01A-01R-0980-07 GPC1-ANKFN1 5 11 chr2:240436084:+ chr17:56350766:+ FRAMESHIFT NA TCGA-66-2789-01A-01R-0980-07 ITGB1BP1-COL5A1 1 10 chr2:9423373:- chr9:134767000:+ . NA TCGA-66-2789-01A-01R-0980-07 BAG4-LETM2 1 2 chr8:38192795:+ chr8:38400272:+ INFRAME NA TCGA-66-2791-01A-01R-0980-07 TCTN1-CCDC63 2 13 chr12:110619956:+ chr12:110858586:+ INFRAME NA TCGA-66-2792-01A-01R-0980-07 ATP1B3-GRK7 5 32 chr3:141876910:+ chr3:141807645:+ FRAMESHIFT NA TCGA-66-2793-01A-01R-1201-07 MED15-PI4KA 87 542 chr22:20500836:+ chr22:20749994:- . NA TCGA-66-2793-01A-01R-1201-07 PQBP1-ERAS 28 191 chrX:48898014:+ chrX:48829081:+ . NA TCGA-66-2793-01A-01R-1201-07 ZC3H3-PYCRL 8 31 chr8:143536257:- chr8:143608126:- INFRAME NA TCGA-66-2793-01A-01R-1201-07 KLHL22-ZNF74 2 29 chr22:20488985:- chr22:20400632:+ FRAMESHIFT NA TCGA-66-2793-01A-01R-1201-07 PTPN2-FTL 3 11 chr18:12859164:- chr19:48965350:+ . NA TCGA-66-2793-01A-01R-1201-07 RPN2-MYL9 3 6 chr20:37213865:+ chr20:36549077:+ FRAMESHIFT NA TCGA-66-2793-01A-01R-1201-07 JDP2-FLVCR2 3 4 chr14:75432336:+ chr14:75622079:+ FRAMESHIFT NA TCGA-66-2793-01A-01R-1201-07 RIMS2-PVT1 1 6 chr8:103501062:+ chr8:127855155:+ . NA TCGA-66-2795-01A-02R-0980-07 TAX1BP3-NCBP3 11 53 chr17:3668488:- chr17:3816270:- FRAMESHIFT NA TCGA-66-2795-01A-02R-0980-07 ARHGAP5-NUBPL 2 17 chr14:32117287:+ chr14:31673355:+ INFRAME NA TCGA-66-2795-01A-02R-0980-07 PEPD-NME7 2 10 chr19:33462995:- chr1:169324500:- FRAMESHIFT NA TCGA-66-2795-01A-02R-0980-07 CANX-CCT4 1 1 chr5:179709059:+ chr2:61872588:- INFRAME NA TCGA-66-2800-01A-01R-1201-07 NUB1-ABCB8 17 100 chr7:151345466:+ chr7:151045209:+ INFRAME NA TCGA-66-2800-01A-01R-1201-07 ARID1B-ENPP4 11 43 chr6:157084905:+ chr6:46139551:+ . Likely Oncogenic NA TCGA-66-2800-01A-01R-1201-07 C1QL1-SLC16A5 2 29 chr17:44967452:- chr17:75098038:+ FRAMESHIFT NA TCGA-66-2800-01A-01R-1201-07 TMEM98-GPATCH8 2 12 chr17:32934324:+ chr17:44406051:- INFRAME NA TCGA-66-2800-01A-01R-1201-07 IGF2R-SYTL3 2 7 chr6:159969395:+ chr6:158708322:+ INFRAME NA TCGA-66-2800-01A-01R-1201-07 EIF5A-MKS1 2 5 chr17:7309800:+ chr17:58208583:- FRAMESHIFT NA TCGA-66-2800-01A-01R-1201-07 NMD3-PRKRA 1 7 chr3:161225064:+ chr2:178443384:- INFRAME NA TCGA-66-2800-01A-01R-1201-07 CDR2L-KSR1 1 5 chr17:74988122:+ chr17:27483658:+ . NA TCGA-66-2800-01A-01R-1201-07 SLC16A5-DCAF7 1 2 chr17:75098181:+ chr17:63578470:+ FRAMESHIFT NA TCGA-68-7755-01A-11R-2125-07 OTUD7B-CTSS 99 322 chr1:149977426:- chr1:150733145:- FRAMESHIFT NA TCGA-68-7755-01A-11R-2125-07 NBEAL1-MLLT3 6 10 chr2:203202781:+ chr9:20365744:- INFRAME NA TCGA-68-7755-01A-11R-2125-07 OTUD7B-HORMAD1 4 13 chr1:149977426:- chr1:150719538:- . NA TCGA-68-7755-01A-11R-2125-07 WWTR1-SOX2-OT 1 10 chr3:149572864:- chr3:181563720:+ . NA TCGA-68-8250-01A-11R-2296-07 URB2-KB-1562D12.1 39 215 chr1:229627759:+ chr8:101461617:- . NA TCGA-68-8250-01A-11R-2296-07 LIFR-BCAS3 17 111 chr5:38496382:- chr17:61368327:+ INFRAME NA TCGA-68-8250-01A-11R-2296-07 AGAP3-RELN 5 19 chr7:151087072:+ chr7:103551296:- FRAMESHIFT NA TCGA-68-8250-01A-11R-2296-07 GIGYF2-ATG16L1 3 15 chr2:232697392:+ chr2:233256102:+ . NA TCGA-68-8250-01A-11R-2296-07 RELN-CHRM2 3 11 chr7:103551067:- chr7:136951003:+ . NA TCGA-68-8250-01A-11R-2296-07 TCF7L1-TMEM182 2 7 chr2:85283578:+ chr2:102932885:+ FRAMESHIFT NA TCGA-68-8250-01A-11R-2296-07 ZBTB20-CFAP44 2 5 chr3:115071219:- chr3:113304117:- . NA TCGA-68-8250-01A-11R-2296-07 SPAG1-STK3 1 4 chr8:100233537:+ chr8:98707311:- INFRAME NA TCGA-68-8251-01A-11R-2296-07 CSTF3-CCDC73 3 37 chr11:33161299:- chr11:32683574:- INFRAME NA TCGA-68-8251-01A-11R-2296-07 CTNND1-LARGE2 5 9 chr11:57804780:+ chr11:45922821:+ . NA TCGA-68-8251-01A-11R-2296-07 RHOT1-RHBDL3 1 17 chr17:32201056:+ chr17:32316232:+ INFRAME NA TCGA-68-8251-01A-11R-2296-07 OSBPL10-CNN3 2 4 chr3:31830040:- chr1:94903524:- INFRAME NA TCGA-68-8251-01A-11R-2296-07 RPL22-RER1 1 7 chr1:6197652:- chr1:2395784:+ . NA TCGA-68-8251-01A-11R-2296-07 PSMG2-PTPN2 1 4 chr18:12724619:+ chr18:12825944:- INFRAME NA TCGA-68-A59J-01A-21R-A26W-07 AKR1C3-AKR1E2 13 90 chr10:5097550:+ chr10:4830675:+ INFRAME NA TCGA-68-A59J-01A-21R-A26W-07 ANO1-SLC7A8 11 52 chr11:70171039:+ chr14:23166540:- INFRAME NA TCGA-68-A59J-01A-21R-A26W-07 RNF217-HDDC2 1 1 chr6:125058106:+ chr6:125277240:- INFRAME NA TCGA-6A-AB49-01A-12R-A405-07 ABCA5-C17orf67 8 60 chr17:69283953:- chr17:56795180:- FRAMESHIFT NA TCGA-6A-AB49-01A-12R-A405-07 NCOA3-GGT7 1 13 chr20:47502019:+ chr20:34863548:- . NA TCGA-6A-AB49-01A-12R-A405-07 TOP1-SLC2A10 1 10 chr20:41118296:+ chr20:46729353:+ FRAMESHIFT Likely Oncogenic NA TCGA-70-6722-01A-11R-1820-07 FAM177A1-AP4S1 4 30 chr14:35046628:+ chr14:31080573:+ INFRAME NA TCGA-70-6722-01A-11R-1820-07 PTPRG-MCM3AP 1 15 chr3:61748982:+ chr21:46280137:- INFRAME NA TCGA-70-6722-01A-11R-1820-07 NAALADL2-NCKAP5 1 11 chr3:175471758:+ chr2:132868974:- INFRAME NA TCGA-70-6722-01A-11R-1820-07 PARD3B-VWC2L 1 6 chr2:204965323:+ chr2:214575672:+ INFRAME NA TCGA-70-6723-01A-11R-1820-07 RNF121-PCDH9 10 44 chr11:71960891:+ chr13:66305028:- FRAMESHIFT NA TCGA-70-6723-01A-11R-1820-07 ACTG1-CCNC 5 25 chr17:81510686:- chr6:99568651:- . NA TCGA-70-6723-01A-11R-1820-07 ZNF98-CPAMD8 2 14 chr19:22532339:- chr19:16925372:- FRAMESHIFT NA TCGA-70-6723-01A-11R-1820-07 TCEA1-EGFR 1 2 chr8:54022063:- chr7:55142286:+ FRAMESHIFT Likely Oncogenic NA TCGA-77-6842-01A-11R-1949-07 VDAC3-DKK4 12 484 chr8:42395133:+ chr8:42377172:- . NA TCGA-77-6842-01A-11R-1949-07 ELMO1-SCIN 27 165 chr7:37096619:- chr7:12644584:+ INFRAME NA TCGA-77-6842-01A-11R-1949-07 PI4KA-PRODH 1 9 chr22:20858570:- chr22:18925722:- FRAMESHIFT NA TCGA-77-6842-01A-11R-1949-07 KAT6A-SLC20A2 1 6 chr8:42048378:- chr8:42535335:- . NA TCGA-77-6843-01A-11R-1949-07 MARCH8-MSMB 1 5 chr10:45489367:- chr10:46040091:- INFRAME NA TCGA-77-6845-01A-11R-1949-07 CRIPT-GAS5 3 16 chr2:46619681:+ chr1:173866567:- . NA TCGA-77-6845-01A-11R-1949-07 EEF2K-C10orf35 4 11 chr16:22206679:+ chr10:69631480:+ . NA TCGA-77-7139-01A-11R-2045-07 ARID1A-RPL4 45 318 chr1:26732792:+ chr15:66500347:- FRAMESHIFT Likely Oncogenic NA TCGA-77-7139-01A-11R-2045-07 MARK3-TDRD9 31 59 chr14:103492034:+ chr14:104040196:+ INFRAME NA TCGA-77-7140-01A-41R-2045-07 CYB561-AMZ2P1 23 181 chr17:63446245:- chr17:64968381:- . NA TCGA-77-7140-01A-41R-2045-07 ADNP-PCIF1 13 40 chr20:50928651:- chr20:45941053:+ . NA TCGA-77-7140-01A-41R-2045-07 ZNF519-C16orf97 10 46 chr18:14132275:- chr16:52005634:- . NA TCGA-77-7140-01A-41R-2045-07 HMG20A-RCN2 9 43 chr15:77421004:+ chr15:76932361:+ . NA TCGA-77-7140-01A-41R-2045-07 PARD3-NSUN6 13 27 chr10:34269657:- chr10:18616293:- INFRAME NA TCGA-77-7140-01A-41R-2045-07 RAB2A-PLEKHA6 4 33 chr8:60584815:+ chr1:204274809:- INFRAME NA TCGA-77-7140-01A-41R-2045-07 TMEM131-BAGE2 2 8 chr2:97888052:- chr21:10454134:+ . NA TCGA-77-7140-01A-41R-2045-07 FNBP1L-EFCAB8 2 5 chr1:93499583:+ chr20:32943636:+ FRAMESHIFT NA TCGA-77-7141-01A-11R-2045-07 ANKRD12-EPB41L3 4 7 chr18:9182519:+ chr18:5489161:- FRAMESHIFT NA TCGA-77-7142-01A-11R-2045-07 SERINC5-THBS4 42 163 chr5:80174954:- chr5:80076855:+ INFRAME NA TCGA-77-7142-01A-11R-2045-07 PDIA5-DIRC2 41 115 chr3:123124343:+ chr3:122879263:+ FRAMESHIFT NA TCGA-77-7142-01A-11R-2045-07 PDE4D-RAB3C 6 40 chr5:59768247:- chr5:58825038:+ INFRAME NA TCGA-77-7142-01A-11R-2045-07 HN1-NUP85 5 19 chr17:75154342:- chr17:75208527:+ FRAMESHIFT NA TCGA-77-7142-01A-11R-2045-07 RCOR1-LSAMP 4 5 chr14:102708583:+ chr3:115852617:- FRAMESHIFT NA TCGA-77-7142-01A-11R-2045-07 AHNAK-EEF1G 3 7 chr11:62533661:- chr11:62567528:- INFRAME NA TCGA-77-7142-01A-11R-2045-07 NUDT3-DNAH8 1 12 chr6:34392264:- chr6:38828184:+ INFRAME NA TCGA-77-7142-01A-11R-2045-07 CDKAL1-OR2H1 2 6 chr6:20781265:+ chr6:29458454:+ . NA TCGA-77-7337-01A-21R-2045-07 GART-TMEM50B 7 3 chr21:33542065:- chr21:33439297:- . NA TCGA-77-7337-01A-21R-2045-07 SPRR1A-SPRR2E 1000 1000 chr1:152985451:+ chr1:153093666:- FRAMESHIFT NA TCGA-77-7338-01A-11R-2045-07 ICAM1-HNRNPM 43 94 chr19:10275028:+ chr19:8485603:+ INFRAME NA TCGA-77-7338-01A-11R-2045-07 EIF3K-PPP2R2A 20 44 chr19:38626102:+ chr8:26370134:+ FRAMESHIFT NA TCGA-77-7338-01A-11R-2045-07 SERPINB13-SERPINB5 2 16 chr18:63595184:+ chr18:63503330:+ INFRAME NA TCGA-77-7338-01A-11R-2045-07 MICALL1-EIF3L 2 4 chr22:37927826:+ chr22:37870176:+ INFRAME NA TCGA-77-7338-01A-11R-2045-07 PDE7A-ARMC1 2 2 chr8:65779720:- chr8:65627433:- . NA TCGA-77-7338-01A-11R-2045-07 SLCO2A1-SLC25A36 2 1 chr3:133973663:- chr3:140970927:+ INFRAME NA TCGA-77-7463-01A-11R-2045-07 EMP2-TERF2 22 28 chr16:10543570:- chr16:69385486:- INFRAME NA TCGA-77-7465-01A-11R-2045-07 GLI3-CROT 7 28 chr7:42076752:- chr7:87346340:+ . NA TCGA-77-7465-01A-11R-2045-07 NINL-GINS1 5 30 chr20:25526408:- chr20:25417104:+ FRAMESHIFT NA TCGA-77-8007-01A-11R-2187-07 SLC11A2-ATP8B1 1 3 chr12:51026315:- chr18:57697867:- . NA TCGA-77-8008-01A-21R-2187-07 AXIN1-TMEM207 1 3 chr16:304304:- chr3:190447827:- INFRAME Likely Oncogenic NA TCGA-77-8009-01A-11R-2187-07 TPCN2-TMEM179B 21 47 chr11:69049106:+ chr11:62789023:+ FRAMESHIFT NA TCGA-77-8009-01A-11R-2187-07 RRM2B-ZNF704 16 38 chr8:102218814:- chr8:80643129:- INFRAME NA TCGA-77-8009-01A-11R-2187-07 TPD52-RALYL 14 20 chr8:80171425:- chr8:84873284:+ INFRAME NA TCGA-77-8009-01A-11R-2187-07 RAB40C-MYH11 5 5 chr16:618260:+ chr16:15823411:- INFRAME NA TCGA-77-8009-01A-11R-2187-07 RNF130-DNAJC19 4 4 chr5:180040453:- chr3:180988229:- FRAMESHIFT NA TCGA-77-8009-01A-11R-2187-07 DCAF10-PAX5 3 3 chr9:37801405:+ chr9:37020801:- FRAMESHIFT NA TCGA-77-8009-01A-11R-2187-07 C10orf76-MGEA5 1 4 chr10:101956597:- chr10:101804019:- INFRAME NA TCGA-77-8009-01A-11R-2187-07 REL-RAB1A 1 4 chr2:60901083:+ chr2:65104806:- FRAMESHIFT NA TCGA-77-8130-01A-11R-2247-07 XPO6-HIRIP3 1000 1000 chr16:28211366:- chr16:29995810:- . NA TCGA-77-8131-01A-11R-2247-07 MNAT1-SPSB1 2 15 chr14:60879835:+ chr1:9367448:+ FRAMESHIFT NA TCGA-77-8131-01A-11R-2247-07 ABL2-GPR161 1 5 chr1:179229241:- chr1:168114549:- . NA TCGA-77-8136-01A-11R-2247-07 GMDS-CASC15 5 40 chr6:1930103:- chr6:22173998:+ . NA TCGA-77-8136-01A-11R-2247-07 RBM10-SEC16B 1 23 chrX:47145516:+ chr1:177968039:- . Likely Oncogenic NA TCGA-77-8136-01A-11R-2247-07 DDX39B-NCR3 3 3 chr6:31535367:- chr6:31589899:- INFRAME NA TCGA-77-8139-01A-11R-2247-07 UAP1-NOS1AP 1 11 chr1:162566348:+ chr1:162287344:+ FRAMESHIFT NA TCGA-77-8139-01A-11R-2247-07 USP3-HERC1 1 11 chr15:63504830:+ chr15:63663204:- INFRAME NA TCGA-77-8140-01A-11R-2247-07 VRK3-PTOV1 35 102 chr19:49998677:- chr19:49857743:+ . NA TCGA-77-8140-01A-11R-2247-07 MGRN1-C16orf96 4 22 chr16:4625048:+ chr16:4571561:+ FRAMESHIFT NA TCGA-77-8140-01A-11R-2247-07 TMEM259-SBNO2 3 14 chr19:1020772:- chr19:1127765:- INFRAME NA TCGA-77-8140-01A-11R-2247-07 MYT1-TCEA2 2 11 chr20:64151910:+ chr20:64062430:+ . NA TCGA-77-8140-01A-11R-2247-07 INTS11-AURKAIP1 1 10 chr1:1324581:- chr1:1374445:- INFRAME NA TCGA-77-8143-01A-11R-2247-07 NSD3-TACC1 3 17 chr8:38318895:- chr8:38847955:+ FRAMESHIFT NA TCGA-77-8143-01A-11R-2247-07 ETNK1-CMAS 3 13 chr12:22659154:+ chr12:22055149:+ INFRAME NA TCGA-77-8144-01A-11R-2247-07 SLC25A13-MAGI2 7 9 chr7:96184927:- chr7:78369213:- INFRAME NA TCGA-77-8145-01A-11R-2247-07 C9orf3-WDR53 14 110 chr9:95005616:+ chr3:196554807:- INFRAME NA TCGA-77-8148-01A-11R-2247-07 STIP1-PC 1 19 chr11:64200293:+ chr11:66954436:- . NA TCGA-77-8148-01A-11R-2247-07 RLF-CAP1 1 4 chr1:40202614:+ chr1:40064227:+ INFRAME NA TCGA-77-8148-01A-11R-2247-07 RNF10-OASL 1000 1000 chr12:120552698:+ chr12:121020786:- INFRAME NA TCGA-77-8150-01A-11R-2247-07 RAB14-C5 6 33 chr9:121201639:- chr9:120991280:- . NA TCGA-77-8153-01A-11R-2403-07 INCENP-CCS 12 64 chr11:62141044:+ chr11:66605339:+ INFRAME NA TCGA-77-8153-01A-11R-2403-07 NIPBL-MAPRE1 10 50 chr5:36877178:+ chr20:32825925:+ . NA TCGA-77-8153-01A-11R-2403-07 NDUFS6-C7 3 12 chr5:1802374:+ chr5:40928580:+ INFRAME NA TCGA-77-8153-01A-11R-2403-07 KIF14-DDX59 1 16 chr1:200615355:- chr1:200644517:- FRAMESHIFT NA TCGA-77-8154-01A-11R-2247-07 ZNF768-LAT 7 32 chr16:30525005:- chr16:28989527:+ INFRAME NA TCGA-77-8154-01A-11R-2247-07 GNB1-NADK 8 5 chr1:1890820:- chr1:1765446:- . NA TCGA-77-8154-01A-11R-2247-07 TTC7B-RUNX1 3 3 chr14:90644048:- chr21:34892963:- FRAMESHIFT Likely Oncogenic NA TCGA-77-8156-01A-11R-2247-07 KCTD20-PNPLA1 4 26 chr6:36470257:+ chr6:36291320:+ INFRAME NA TCGA-77-A5FZ-01A-31R-A27Q-07 PANK3-IGHJ4 33 0 chr5:168552535:- chr14:105864251:- . NA TCGA-77-A5FZ-01A-31R-A27Q-07 SLC2A3P1-IGHJ4 33 0 chr5:168552535:- chr14:105864251:- . NA TCGA-77-A5G3-01A-31R-A27Q-07 KLF12-COMMD6 1 9 chr13:73845827:- chr13:75537675:- FRAMESHIFT NA TCGA-77-A5G3-01A-31R-A27Q-07 USP25-CAPN3 2 4 chr21:15831629:+ chr15:42384483:+ FRAMESHIFT NA TCGA-77-A5G3-01A-31R-A27Q-07 SHH-PLCB1 1 4 chr7:155811823:- chr20:8716264:+ FRAMESHIFT NA TCGA-77-A5G6-01A-11R-A27Q-07 ATG5-NTM 4 61 chr6:106248150:- chr11:131660929:+ . NA TCGA-77-A5G6-01A-11R-A27Q-07 EML1-TTLL5 12 13 chr14:99793543:+ chr14:75882685:+ FRAMESHIFT NA TCGA-77-A5G6-01A-11R-A27Q-07 RAD51B-MARK3 8 15 chr14:67887204:+ chr14:103480387:+ INFRAME NA TCGA-77-A5G6-01A-11R-A27Q-07 ARAP2-PDS5A 3 13 chr4:36091881:- chr4:39869462:- INFRAME NA TCGA-77-A5G6-01A-11R-A27Q-07 TTLL5-RGS6 3 11 chr14:75783530:+ chr14:72454528:+ INFRAME NA TCGA-77-A5G6-01A-11R-A27Q-07 RAB18-ZBTB20 1 8 chr10:27526889:+ chr3:114693575:- . NA TCGA-77-A5G6-01A-11R-A27Q-07 RTN4IP1-QRSL1 1 6 chr6:106628748:- chr6:106640349:+ FRAMESHIFT NA TCGA-77-A5G7-01B-11R-A27Q-07 CSNK1G1-PPIB 3 17 chr15:64300319:- chr15:64156909:- INFRAME NA TCGA-77-A5G7-01B-11R-A27Q-07 SEMA3D-KCNU1 1 5 chr7:85121741:- chr8:36864404:+ INFRAME NA TCGA-77-A5GB-01B-11R-A27Q-07 TIGAR-PRR4 12 68 chr12:4331317:+ chr12:10848407:- INFRAME NA TCGA-77-A5GB-01B-11R-A27Q-07 BICD1P1-IGHJ4 22 0 chr2:200844312:+ chr14:105864258:- . NA TCGA-77-A5GH-01A-11R-A27Q-07 PAPSS2-BID 10 16 chr10:87709313:+ chr22:17739488:- INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 MGAT3-SYNGR1 5 15 chr22:39457557:+ chr22:39374316:+ . NA TCGA-77-A5GH-01A-11R-A27Q-07 TRABD2A-CHMP3 5 9 chr2:84832055:- chr2:86507593:- FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 ATRX-LPAR4 2 17 chrX:77785982:- chrX:78751210:+ . Likely Oncogenic NA TCGA-77-A5GH-01A-11R-A27Q-07 NOL9-DNAJC11 3 7 chr1:6549571:- chr1:6654039:- INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 GOLT1B-IAPP 2 7 chr12:21508561:+ chr12:21373337:+ . NA TCGA-77-A5GH-01A-11R-A27Q-07 MAPK8IP3-TMEM204 1 11 chr16:1729578:+ chr16:1554782:+ FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 KANSL1-PARD3B 1 10 chr17:46082441:- chr2:205401013:+ FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 MBNL2-GLI3 2 6 chr13:97366553:+ chr7:42148468:- FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 SCYL3-KIFAP3 2 6 chr1:169873696:- chr1:169954110:- FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 POU2AF1-BTG4 2 5 chr11:111379162:- chr11:111498802:- . NA TCGA-77-A5GH-01A-11R-A27Q-07 SLCO2A1-RYK 2 5 chr3:134029707:- chr3:134188923:- FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 ARID4B-SOX5 1 7 chr1:235213769:- chr12:23896024:- INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 USP39-GGCX 1 4 chr2:85641118:+ chr2:85559075:- FRAMESHIFT NA TCGA-77-A5GH-01A-11R-A27Q-07 DESI2-C1orf101 1 3 chr1:244689342:+ chr1:244635489:+ INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 NOP58-KIAA2012 1 3 chr2:202291270:+ chr2:202193301:+ INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 E2F5-LRRCC1 1 2 chr8:85177654:+ chr8:85109595:+ INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 KIAA0355-C19orf47 1 2 chr19:34300968:+ chr19:40341890:- INFRAME NA TCGA-77-A5GH-01A-11R-A27Q-07 PRRX2-NTMT1 1 2 chr9:129666126:+ chr9:129632650:+ . NA TCGA-79-5596-01A-31R-1949-07 SREK1-ST6GAL1 5 16 chr5:66153596:+ chr3:187038742:+ . NA TCGA-79-5596-01A-31R-1949-07 OSBPL10-UBP1 1 13 chr3:31980899:- chr3:33425741:- INFRAME NA TCGA-79-5596-01A-31R-1949-07 PDIA6-FBRSL1 2 6 chr2:10793096:- chr12:132525734:+ INFRAME NA TCGA-85-6175-01A-11R-1820-07 DCTN2-DDX23 106 378 chr12:57546028:- chr12:48836266:- INFRAME NA TCGA-85-6175-01A-11R-1820-07 BORCS5-PTPRR 10 61 chr12:12361349:+ chr12:70701323:- FRAMESHIFT NA TCGA-85-6175-01A-11R-1820-07 SLC25A36-PEX5L 7 31 chr3:140942095:+ chr3:179816004:- FRAMESHIFT NA TCGA-85-6175-01A-11R-1820-07 TSC22D2-ADCY5 3 8 chr3:150411308:+ chr3:123352581:- INFRAME NA TCGA-85-6175-01A-11R-1820-07 P4HB-COL1A2 1 12 chr17:81845871:- chr7:94411056:+ FRAMESHIFT NA TCGA-85-6560-01A-11R-1820-07 TARS2-VPS45 25 129 chr1:150492489:+ chr1:150144709:+ INFRAME NA TCGA-85-6560-01A-11R-1820-07 ABHD12B-RNASE1 27 43 chr14:50881626:+ chr14:20803004:- . NA TCGA-85-6560-01A-11R-1820-07 GTF2H1-PSMA1 5 26 chr11:18339657:+ chr11:14505248:- FRAMESHIFT NA TCGA-85-6560-01A-11R-1820-07 MIR99AHG-MIR548XHG 1 12 chr21:16391685:+ chr21:18589620:- . NA TCGA-85-6561-01A-11R-1820-07 PIAS2-IGKJ1 135 0 chr18:46808092:- chr2:88861923:- . NA TCGA-85-6798-01A-11R-1949-07 MAP1B-PTCD2 2 9 chr5:72115799:+ chr5:72322172:+ INFRAME NA TCGA-85-6798-01A-11R-1949-07 CENPQ-MUT 2 6 chr6:49488684:+ chr6:49459505:- . NA TCGA-85-7696-01A-11R-2125-07 DNPEP-TNKS 8 40 chr2:219386286:- chr8:9734865:+ INFRAME NA TCGA-85-7696-01A-11R-2125-07 EIF3D-MYH9 4 40 chr22:36529076:- chr22:36286846:- . NA TCGA-85-7696-01A-11R-2125-07 NOMO1-CSNK1A1 4 10 chr16:14896114:+ chr5:149507133:- . NA TCGA-85-7696-01A-11R-2125-07 MTSS1-FBXO32 2 3 chr8:124699526:- chr8:123506574:- FRAMESHIFT NA TCGA-85-7696-01A-11R-2125-07 GIPC1-UBE2D2 1 1 chr19:14491656:- chr5:139600372:+ . NA TCGA-85-7697-01A-11R-2125-07 MAPK1-SSU72 9 31 chr22:21867322:- chr1:1545002:- INFRAME NA TCGA-85-7697-01A-11R-2125-07 ATP1A1-SORT1 5 14 chr1:116387491:+ chr1:109369589:- INFRAME NA TCGA-85-7698-01A-11R-2125-07 IGSF3-PARL 9 28 chr1:116579392:- chr3:183829709:- FRAMESHIFT NA TCGA-85-7699-01A-11R-2125-07 ANO1-FGF19 10 50 chr11:70180056:+ chr11:69703364:- FRAMESHIFT NA TCGA-85-7710-01A-11R-2125-07 KIRREL-CD1A 10 64 chr1:157993728:+ chr1:158255084:+ INFRAME NA TCGA-85-7710-01A-11R-2125-07 DENND1A-RRAGB 2 12 chr9:123878951:- chrX:55719314:+ FRAMESHIFT NA TCGA-85-7710-01A-11R-2125-07 RASA1-RGS18 1 2 chr5:87378538:+ chr1:192158631:+ . Likely Oncogenic NA TCGA-85-7843-01A-11R-2125-07 RASSF7-DEAF1 13 18 chr11:561033:+ chr11:654051:- . NA TCGA-85-7843-01A-11R-2125-07 MED29-ADAM18 4 39 chr19:39393637:+ chr8:39692600:+ INFRAME NA TCGA-85-7843-01A-11R-2125-07 DOCK11-IL13RA1 7 4 chrX:118496073:+ chrX:118741017:+ FRAMESHIFT NA TCGA-85-7843-01A-11R-2125-07 ASCC3-SIM1 1 6 chr6:100589634:- chr6:100453844:- FRAMESHIFT NA TCGA-85-7843-01A-11R-2125-07 TBC1D8-EPB41L5 2 2 chr2:101090254:- chr2:120127688:+ FRAMESHIFT NA TCGA-85-7844-01A-11R-2125-07 AHNAK2-CD244 10 4 chr14:104970456:- chr1:160841901:- . NA TCGA-85-7950-01A-11R-2187-07 RELT-PAAF1 12 42 chr11:73392468:+ chr11:73909399:+ INFRAME NA TCGA-85-7950-01A-11R-2187-07 TNPO2-HOOK2 2 2 chr19:12710621:- chr19:12766240:- FRAMESHIFT NA TCGA-85-7950-01A-11R-2187-07 SDC4-NRG1 1 4 chr20:45330366:- chr8:32727949:+ INFRAME NA TCGA-85-8048-01A-11R-2247-07 GZMM-HNRNPM 4 11 chr19:547436:+ chr19:8488691:+ FRAMESHIFT NA TCGA-85-8048-01A-11R-2247-07 ZMAT5-HIRA 2 7 chr22:29738330:- chr22:19331556:- FRAMESHIFT NA TCGA-85-8048-01A-11R-2247-07 NF2-MORC2 1 8 chr22:29604112:+ chr22:30950445:- FRAMESHIFT Likely Oncogenic NA TCGA-85-8048-01A-11R-2247-07 ROCK1-ABHD3 1 3 chr18:21110818:- chr18:21664230:- INFRAME NA TCGA-85-8052-01A-11R-2247-07 KHSRP-ZNF441 1 3 chr19:6421278:- chr19:11778330:+ FRAMESHIFT NA TCGA-85-8052-01A-11R-2247-07 USP39-GNLY 1000 1000 chr2:85641012:+ chr2:85683172:+ . NA TCGA-85-8070-01A-11R-2247-07 USP48-MAN1C1 133 943 chr1:21782824:- chr1:25783663:+ INFRAME NA TCGA-85-8070-01A-11R-2247-07 USP48-SELENON 10 77 chr1:21782824:- chr1:25805142:+ FRAMESHIFT NA TCGA-85-8070-01A-11R-2247-07 DDHD2-EIF4EBP1 4 36 chr8:38253718:+ chr8:38057081:+ FRAMESHIFT NA TCGA-85-8070-01A-11R-2247-07 DAPP1-SLC4A4 6 23 chr4:99853348:+ chr4:71534227:+ INFRAME NA TCGA-85-8070-01A-11R-2247-07 CCDC186-GFRA1 1 7 chr10:114134913:- chr10:116125557:- FRAMESHIFT NA TCGA-85-8071-01A-11R-2247-07 CHST9-DLGAP3 5 19 chr18:27024116:- chr1:34907437:- . NA TCGA-85-8071-01A-11R-2247-07 COL17A1-CFAP43 2 30 chr10:104043501:- chr10:104225557:- INFRAME NA TCGA-85-8071-01A-11R-2247-07 BTAF1-MARCH5 3 4 chr10:91924090:+ chr10:92311135:+ INFRAME NA TCGA-85-8072-01A-31R-2247-07 ATF2-CHRNA1 1 6 chr2:175080660:- chr2:174759633:- INFRAME NA TCGA-85-8072-01A-31R-2247-07 PNO1-SHROOM3 1 4 chr2:68158529:+ chr4:76555609:+ INFRAME NA TCGA-85-8276-01A-11R-2296-07 GPD1L-CMTM7 8 36 chr3:32146734:+ chr3:32441840:+ INFRAME NA TCGA-85-8276-01A-11R-2296-07 AHNAK-DPF2 4 20 chr11:62491732:- chr11:65348850:+ FRAMESHIFT NA TCGA-85-8276-01A-11R-2296-07 PACS1-CHKA 5 8 chr11:66070842:+ chr11:68054047:- FRAMESHIFT NA TCGA-85-8276-01A-11R-2296-07 IGHG3-COL1A1 1 17 chr14:105770293:- chr17:50190380:- FRAMESHIFT NA TCGA-85-8276-01A-11R-2296-07 PPP1R12A-TBC1D30 2 4 chr12:79934695:- chr12:64785881:+ FRAMESHIFT NA TCGA-85-8276-01A-11R-2296-07 PROSC-ZNF622 1 8 chr8:37766355:+ chr5:16463270:- INFRAME NA TCGA-85-8276-01A-11R-2296-07 GTPBP1-FAM227A 1 7 chr22:38730881:+ chr22:38638822:- . NA TCGA-85-8276-01A-11R-2296-07 LTV1-EPM2A 1 7 chr6:143846224:+ chr6:145502575:- FRAMESHIFT NA TCGA-85-8276-01A-11R-2296-07 FRMD8-PACS1 1 6 chr11:65399859:+ chr11:66210362:+ INFRAME NA TCGA-85-8276-01A-11R-2296-07 TENM4-NOX4 1 3 chr11:79215808:- chr11:89498187:- . NA TCGA-85-8277-01A-11R-2296-07 PHGDH-HMGCS2 54 279 chr1:119740518:+ chr1:119752674:- INFRAME NA TCGA-85-8277-01A-11R-2296-07 SIRT6-CREB3L3 6 71 chr19:4180782:- chr19:4156998:+ FRAMESHIFT NA TCGA-85-8277-01A-11R-2296-07 NOTCH2-SEC22B 1 41 chr1:119996997:- chr1:120157192:- INFRAME NA TCGA-85-8277-01A-11R-2296-07 RASA2-KALRN 2 14 chr3:141487216:+ chr3:124298791:+ FRAMESHIFT NA TCGA-85-8277-01A-11R-2296-07 ZNF335-NCOA5 3 4 chr20:45948903:- chr20:46065228:- . NA TCGA-85-8287-01A-11R-2296-07 KIT-SLC4A4 2 32 chr4:54733192:+ chr4:71236576:+ FRAMESHIFT NA TCGA-85-8350-01A-11R-2296-07 IGLV1-50-IGLC6 3 4 chr22:22327671:+ chr22:22919535:+ . NA TCGA-85-8351-01A-11R-2296-07 PATJ-ELDR 23 223 chr1:61742555:+ chr7:55238666:- . NA TCGA-85-8351-01A-11R-2296-07 CCNI-MRPL1 12 107 chr4:77075472:- chr4:77949797:+ INFRAME NA TCGA-85-8351-01A-11R-2296-07 FGGY-CASC11 2 15 chr1:59457076:+ chr8:127689423:- . NA TCGA-85-8352-01A-31R-2326-07 SRPK2-LRP5 25 80 chr7:105388648:- chr11:68446436:+ FRAMESHIFT NA TCGA-85-8352-01A-31R-2326-07 SHB-SLC22A20 12 46 chr9:37974622:- chr11:65241990:+ . NA TCGA-85-8352-01A-31R-2326-07 ZBTB20-SH3BGRL 2 4 chr3:114801101:- chrX:81276984:+ . NA TCGA-85-8353-01A-21R-2296-07 TYMS-YES1 28 147 chr18:662320:+ chr18:732965:- INFRAME NA TCGA-85-8353-01A-21R-2296-07 TJAP1-ABCC10 6 27 chr6:43478718:+ chr6:43441862:+ . NA TCGA-85-8354-01A-31R-2326-07 DHX30-RPLP1 30 72 chr3:47843255:+ chr15:69452831:+ . NA TCGA-85-8354-01A-31R-2326-07 KCNQ5-AMPH 7 37 chr6:73105367:+ chr7:38394214:- INFRAME NA TCGA-85-8354-01A-31R-2326-07 EXT2-PRMT9 6 17 chr11:44130138:+ chr4:147680471:- INFRAME NA TCGA-85-8354-01A-31R-2326-07 ZPBP-SUGCT 1 27 chr7:50081774:- chr7:40749434:+ FRAMESHIFT NA TCGA-85-8354-01A-31R-2326-07 GRIP1-XCL1 5 5 chr12:66539078:- chr1:168581052:+ FRAMESHIFT NA TCGA-85-8354-01A-31R-2326-07 PPFIBP1-ZNF329 1 10 chr12:27660945:+ chr19:58132676:- . NA TCGA-85-8355-01A-11R-2296-07 FAF1-OSBPL9 2 13 chr1:50959767:- chr1:51765822:+ INFRAME NA TCGA-85-8355-01A-11R-2296-07 NIN-STXBP6 2 2 chr14:50735516:- chr14:24857157:- FRAMESHIFT NA TCGA-85-8355-01A-11R-2296-07 SAV1-PELI2 1 4 chr14:50644744:- chr14:56178335:+ INFRAME NA TCGA-85-8355-01A-11R-2296-07 CHMP3-REEP1 1 3 chr2:86563304:- chr2:86232802:- INFRAME NA TCGA-85-8479-01A-11R-2326-07 SPPL3-ACADS 14 29 chr12:120903845:- chr12:120727026:+ FRAMESHIFT NA TCGA-85-8479-01A-11R-2326-07 MGA-SPTBN5 10 34 chr15:41760529:+ chr15:41857710:- INFRAME Likely Oncogenic NA TCGA-85-8479-01A-11R-2326-07 THRA-PSMD3 2 39 chr17:40084815:+ chr17:39986575:+ INFRAME NA TCGA-85-8479-01A-11R-2326-07 SPPL3-UNC119B 5 11 chr12:120903845:- chr12:120719920:+ FRAMESHIFT NA TCGA-85-8479-01A-11R-2326-07 UBQLN4-MEF2D 1 13 chr1:156053594:- chr1:156483430:- . NA TCGA-85-8479-01A-11R-2326-07 SPTBN5-MGA 1 3 chr15:41861419:- chr15:41761739:+ INFRAME Likely Oncogenic NA TCGA-85-8479-01A-11R-2326-07 NIPBL-KHDC1 1000 1000 chr5:37049301:+ chr6:73292040:- FRAMESHIFT NA TCGA-85-8479-01A-11R-2326-07 TMEM175-IDUA 1000 1000 chr4:932540:+ chr4:1000612:+ . NA TCGA-85-8481-01A-11R-2326-07 ANKRD6-CASP8AP2 1 8 chr6:89433375:+ chr6:89871289:+ . NA TCGA-85-8580-01A-31R-2403-07 FXR1-MCCC1 85 101 chr3:180912736:+ chr3:183072487:- INFRAME NA TCGA-85-8580-01A-31R-2403-07 RBM10-ERAS 5 38 chrX:47147498:+ chrX:48829081:+ . Likely Oncogenic NA TCGA-85-8582-01A-21R-2403-07 NPIPP1-GAREM1 10 7 chr16:15118926:- chr18:32393035:- . NA TCGA-85-8582-01A-21R-2403-07 PDXK-EYS 4 31 chr21:43756054:+ chr6:64307082:- INFRAME NA TCGA-85-8582-01A-21R-2403-07 KDM2A-TEKT4P2 2 9 chr11:67121358:+ chr21:9070444:- . NA TCGA-85-8582-01A-21R-2403-07 PIGK-TGFBR3 3 3 chr1:77122275:- chr1:91722144:- INFRAME NA TCGA-85-8582-01A-21R-2403-07 C11orf80-PPP6R3 1 3 chr11:66744919:+ chr11:68519501:+ . NA TCGA-85-8584-01A-11R-2403-07 KIAA1551-ITPR2 5 61 chr12:31960871:+ chr12:26387594:- . NA TCGA-85-8584-01A-11R-2403-07 SPSB2-DYRK4 8 18 chr12:6872275:- chr12:4562254:+ FRAMESHIFT NA TCGA-85-8584-01A-11R-2403-07 PC-KDM2A 4 31 chr11:66952430:- chr11:67245189:+ . NA TCGA-85-8584-01A-11R-2403-07 HIST4H4-CLEC1A 2 21 chr12:14770679:- chr12:10081413:- . NA TCGA-85-8584-01A-11R-2403-07 RAD51AP1-ATN1 2 9 chr12:4548836:+ chr12:6937845:+ FRAMESHIFT NA TCGA-85-8584-01A-11R-2403-07 LRRC23-LPCAT3 2 5 chr12:6906662:+ chr12:6983539:- INFRAME NA TCGA-85-8584-01A-11R-2403-07 IRAK2-GHRL 1000 1000 chr3:10219789:+ chr3:10290990:- . NA TCGA-85-8664-01A-11R-2403-07 RALGAPB-CTCFL 7 14 chr20:38539958:+ chr20:57519377:- FRAMESHIFT NA TCGA-85-8664-01A-11R-2403-07 SLC2A10-ACSS2 6 14 chr20:46709740:+ chr20:34913096:+ FRAMESHIFT NA TCGA-85-8664-01A-11R-2403-07 BMP7-PIGU 4 11 chr20:57265705:- chr20:34588607:- INFRAME NA TCGA-85-8664-01A-11R-2403-07 TMEM65-EXT1 4 5 chr8:124371854:- chr8:117837201:- FRAMESHIFT NA TCGA-85-8664-01A-11R-2403-07 MYEOV-IFITM9P 3 6 chr11:69294576:+ chr11:69303766:- . NA TCGA-85-8664-01A-11R-2403-07 PKM-CELF6 1 7 chr15:72231116:- chr15:72290255:- . NA TCGA-85-8664-01A-11R-2403-07 FYTTD1-RPL35A 1 3 chr3:197777001:+ chr3:197954003:+ INFRAME NA TCGA-85-A4CL-01A-41R-A26W-07 MLLT3-PLGRKT 4 2 chr9:20620654:- chr9:5361888:- FRAMESHIFT NA TCGA-85-A4CL-01A-41R-A26W-07 CASC15-CAP2 1 8 chr6:22020542:+ chr6:17462996:+ . NA TCGA-85-A4CN-01A-11R-A24H-07 CRK-STX8 5 14 chr17:1455877:- chr17:9250645:- INFRAME NA TCGA-85-A4CN-01A-11R-A24H-07 RBX1-EIF4A1 2 10 chr22:40967884:+ chr17:7578227:+ INFRAME NA TCGA-85-A4CN-01A-11R-A24H-07 CAMKK1-ITGAE 3 2 chr17:3892939:- chr17:3759553:- . NA TCGA-85-A4CN-01A-11R-A24H-07 FAM83B-COL21A1 1 4 chr6:54870690:+ chr6:56101525:- INFRAME NA TCGA-85-A4JB-01A-51R-A262-07 COG5-C7orf66 8 19 chr7:107298142:- chr7:108884584:- . NA TCGA-85-A4JB-01A-51R-A262-07 PPIG-FAM117B 3 20 chr2:169633247:+ chr2:202724917:+ INFRAME NA TCGA-85-A4JB-01A-51R-A262-07 BAZ2B-CYBRD1 1 14 chr2:159615394:- chr2:171541585:+ . NA TCGA-85-A4JB-01A-51R-A262-07 MAP3K5-PERP 1 1 chr6:136791710:- chr6:138096494:- INFRAME NA TCGA-85-A4JC-01A-11R-A24Z-07 NUFIP1-FAAH 9 23 chr13:44959381:- chr1:46413447:+ FRAMESHIFT NA TCGA-85-A4QQ-01A-41R-A262-07 PPFIA1-RBFOX2 14 121 chr11:70272436:+ chr22:35768349:- INFRAME NA TCGA-85-A4QQ-01A-41R-A262-07 PPFIA1-SHANK2 16 97 chr11:70339304:+ chr11:71110051:- . NA TCGA-85-A4QQ-01A-41R-A262-07 UBE2D2-ARHGAP26 3 21 chr5:139614966:+ chr5:143054439:+ INFRAME NA TCGA-85-A4QR-01A-11R-A24Z-07 TRAF7-LRRC1 33 181 chr16:2165936:+ chr6:53878993:+ INFRAME NA TCGA-85-A4QR-01A-11R-A24Z-07 ZFAS1-CNTNAP2 4 7 chr20:49280964:+ chr7:147485935:+ . NA TCGA-85-A4QR-01A-11R-A24Z-07 C19orf12-ZNF749 3 5 chr19:29701174:- chr19:57438374:+ . NA TCGA-85-A4QR-01A-11R-A24Z-07 ECD-PCDH15 2 4 chr10:73134603:- chr10:54236931:- INFRAME NA TCGA-85-A50M-01A-21R-A262-07 SIRT1-DNAJC12 31 204 chr10:67891554:+ chr10:67823392:- INFRAME NA TCGA-85-A50M-01A-21R-A262-07 G3BP1-PCDH9 22 106 chr5:151786715:+ chr13:66305028:- FRAMESHIFT NA TCGA-85-A50M-01A-21R-A262-07 NSD1-C11orf58 12 94 chr5:177239865:+ chr11:16744601:+ INFRAME Likely Oncogenic NA TCGA-85-A50M-01A-21R-A262-07 SDHAF2-FNBP4 15 39 chr11:61430182:+ chr11:47723316:- FRAMESHIFT NA TCGA-85-A50M-01A-21R-A262-07 TBC1D22A-FBLN1 7 31 chr22:46797620:+ chr22:45550492:+ INFRAME NA TCGA-85-A50M-01A-21R-A262-07 LDLRAD3-SNCB 4 31 chr11:36098461:+ chr5:176626761:- INFRAME NA TCGA-85-A50M-01A-21R-A262-07 LINGO2-TLN1 1 8 chr9:28475940:- chr9:35708484:- . NA TCGA-85-A50M-01A-21R-A262-07 PRMT3-TCN1 2 4 chr11:20464546:+ chr11:59861682:- FRAMESHIFT NA TCGA-85-A50M-01A-21R-A262-07 P4HA1-MSS51 1 3 chr10:73072029:- chr10:73428301:- . NA TCGA-85-A50Z-01A-21R-A262-07 ALDH2-LRBA 2 6 chr12:111800063:+ chr4:150872755:- INFRAME NA TCGA-85-A50Z-01A-21R-A262-07 EFNA3-CKS1B 1000 1000 chr1:155087469:+ chr1:154978797:+ . NA TCGA-85-A510-01A-11R-A26W-07 MAP3K10-C19orf47 72 217 chr19:40209219:+ chr19:40341890:- FRAMESHIFT NA TCGA-85-A510-01A-11R-A26W-07 C19orf47-MAP3K10 1 5 chr19:40322028:- chr19:40205911:+ FRAMESHIFT NA TCGA-85-A511-01A-21R-A262-07 TMEM87B-MERTK 7 26 chr2:112055756:+ chr2:111994251:+ INFRAME NA TCGA-85-A511-01A-21R-A262-07 RNF121-PPP6R3 3 8 chr11:71929124:+ chr11:68567014:+ INFRAME NA TCGA-85-A513-01A-12R-A26W-07 MON2-RCC1L 15 71 chr12:62501698:+ chr7:75057616:- INFRAME NA TCGA-85-A513-01A-12R-A26W-07 MGC27382-DAB1 3 23 chr1:78229729:+ chr1:57145429:- . NA TCGA-85-A53L-01A-21R-A26W-07 MARK3-EIF5 10 70 chr14:103405267:+ chr14:103335653:+ . NA TCGA-85-A53L-01A-21R-A26W-07 ELL-LDLRAD1 4 42 chr19:18461578:- chr1:54010410:- FRAMESHIFT NA TCGA-85-A53L-01A-21R-A26W-07 RBM6-IDH2 6 21 chr3:49940225:+ chr15:90091644:- . NA TCGA-85-A53L-01A-21R-A26W-07 GPHN-DCAF5 4 9 chr14:66681185:+ chr14:69091887:- INFRAME NA TCGA-85-A53L-01A-21R-A26W-07 CUX1-SH2B2 2 14 chr7:102195603:+ chr7:102314336:+ FRAMESHIFT NA TCGA-85-A53L-01A-21R-A26W-07 SMARCA4-CARM1 1 14 chr19:11013112:+ chr19:10904951:+ FRAMESHIFT Likely Oncogenic NA TCGA-85-A53L-01A-21R-A26W-07 LAMTOR4-AP4M1 1 11 chr7:100149565:+ chr7:100110191:+ FRAMESHIFT NA TCGA-85-A53L-01A-21R-A26W-07 LETM2-ERCC2 1 2 chr8:38404506:+ chr19:45369147:- INFRAME NA TCGA-90-7766-01A-21R-2125-07 KIF13B-ADAM3A 7 24 chr8:29245346:- chr8:39455504:- . NA TCGA-90-7766-01A-21R-2125-07 ATP5A1-PIEZO2 1 3 chr18:46097836:- chr18:10803994:- . NA TCGA-90-7767-01A-11R-2125-07 NCAPH-KCNIP3 10 9 chr2:96335848:+ chr2:95374296:+ INFRAME NA TCGA-90-7769-01A-11R-2125-07 ABCA13-BLVRA 8 18 chr7:48171552:+ chr7:43803676:+ FRAMESHIFT NA TCGA-90-7769-01A-11R-2125-07 AK1-ST6GALNAC4 6 10 chr9:127871823:- chr9:127912338:- INFRAME NA TCGA-90-7769-01A-11R-2125-07 ASXL2-MINPP1 1 15 chr2:25845481:- chr10:87513124:+ FRAMESHIFT Likely Oncogenic NA TCGA-90-7964-01A-21R-2187-07 NSMCE1-PEX11G 2 5 chr16:27268706:- chr19:7482211:- . NA TCGA-90-A4ED-01A-31R-A24Z-07 TRAF7-LRRC1 1 1 chr16:2165936:+ chr6:53878993:+ INFRAME NA TCGA-90-A59Q-01A-11R-A26W-07 RABGAP1-TTLL11 6 27 chr9:123020459:+ chr9:122039368:- INFRAME NA TCGA-92-7340-01A-21R-2045-07 NUP93-MT1H 2 9 chr16:56730211:+ chr16:56670506:+ . NA TCGA-92-7340-01A-21R-2045-07 RHCG-ANXA2 1 1 chr15:89496361:- chr15:60364523:- INFRAME NA TCGA-92-7341-01A-31R-2045-07 DCBLD2-ABI3BP 13 26 chr3:98901122:- chr3:100780209:- INFRAME NA TCGA-92-7341-01A-31R-2045-07 KIAA1958-HSDL2 5 29 chr9:112487118:+ chr9:112459449:+ . NA TCGA-92-7341-01A-31R-2045-07 LMTK2-BRI3 4 22 chr7:98159425:+ chr7:98282351:+ FRAMESHIFT NA TCGA-92-7341-01A-31R-2045-07 ADGRL3-BBS9 2 12 chr4:61497348:+ chr7:33604865:+ INFRAME NA TCGA-92-7341-01A-31R-2045-07 ALDH3B2-PLA2G16 1 10 chr11:67666906:- chr11:63590368:- FRAMESHIFT NA TCGA-92-7341-01A-31R-2045-07 SEC62-ATG3 2 5 chr3:169985865:+ chr3:112553329:- FRAMESHIFT NA TCGA-92-7341-01A-31R-2045-07 DLG1-PAK2 1 2 chr3:197282679:- chr3:196782626:+ . NA TCGA-92-7341-01A-31R-2045-07 THBS4-SCFD2 1 2 chr5:79991412:+ chr4:53145582:- . NA TCGA-92-8064-01A-11R-2247-07 ARL5B-NSUN6 3 26 chr10:18668677:+ chr10:18551971:- FRAMESHIFT NA TCGA-92-8065-01A-11R-2247-07 CSTA-CASR 46 183 chr3:122337648:+ chr3:122275812:+ INFRAME NA TCGA-92-8065-01A-11R-2247-07 LTBP3-TSPAN32 22 70 chr11:65538959:- chr11:2317399:+ . NA TCGA-92-8065-01A-11R-2247-07 PGLYRP4-S100A2 12 85 chr1:153337181:- chr1:153563887:- . NA TCGA-92-8065-01A-11R-2247-07 SLC1A3-MAPKAP1 3 6 chr5:36608604:+ chr9:125657799:- INFRAME NA TCGA-92-8065-01A-11R-2247-07 S100A7A-S100A9 1 9 chr1:153418223:+ chr1:153360644:+ INFRAME NA TCGA-94-7033-01A-11R-1949-07 SRPK1-CEP57L1 30 78 chr6:35842535:- chr6:109160572:+ FRAMESHIFT NA TCGA-94-7033-01A-11R-1949-07 CTTN-DSG1 14 61 chr11:70422995:+ chr18:31326581:+ INFRAME NA TCGA-94-7557-01A-11R-2125-07 SIK2-CARD17 30 76 chr11:111620402:+ chr11:105099421:- INFRAME NA TCGA-94-7557-01A-11R-2125-07 WWP2-TANGO6 11 53 chr16:69888249:+ chr16:68902328:+ INFRAME NA TCGA-94-7557-01A-11R-2125-07 MARK2-BUB1B 8 21 chr11:63839560:+ chr15:40176477:+ INFRAME NA TCGA-94-7557-01A-11R-2125-07 NFAT5-CDH3 6 27 chr16:69670288:+ chr16:68698191:+ INFRAME NA TCGA-94-7557-01A-11R-2125-07 STIP1-PAK1 4 5 chr11:64186270:+ chr11:77332867:- INFRAME NA TCGA-94-7557-01A-11R-2125-07 CCDC186-EMX2OS 2 10 chr10:114157554:- chr10:117492109:- . NA TCGA-94-7557-01A-11R-2125-07 GTF2H5-SNX9 2 4 chr6:158170538:+ chr6:157766385:+ . NA TCGA-94-7557-01A-11R-2125-07 C11orf84-BUB1B 1 3 chr11:63813813:+ chr15:40176477:+ FRAMESHIFT NA TCGA-94-7943-01A-11R-2187-07 OPA1-PPP2R3A 13 21 chr3:193667280:+ chr3:136145043:+ INFRAME NA TCGA-94-7943-01A-11R-2187-07 ERICH1-IYD 10 18 chr8:668598:- chr6:150389352:+ INFRAME NA TCGA-94-7943-01A-11R-2187-07 EHBP1L1-FRMD8 6 4 chr11:65585591:+ chr11:65411242:+ FRAMESHIFT NA TCGA-94-7943-01A-11R-2187-07 ARID2-SPSB2 3 6 chr12:45811551:+ chr12:6882287:- . Likely Oncogenic NA TCGA-94-7943-01A-11R-2187-07 GSR-OTOA 3 4 chr8:30692969:- chr16:21760470:+ FRAMESHIFT NA TCGA-94-7943-01A-11R-2187-07 CLPB-FCHSD2 1 11 chr11:72294620:- chr11:72902638:- INFRAME NA TCGA-94-7943-01A-11R-2187-07 ZNF653-CNN1 1 8 chr19:11505488:- chr19:11541076:+ INFRAME NA TCGA-94-7943-01A-11R-2187-07 RALGPS2-RASAL2 1 5 chr1:178725419:+ chr1:178420511:+ . NA TCGA-94-8035-01A-11R-2247-07 HNRNPR-E2F2 6 14 chr1:23333518:- chr1:23524488:- INFRAME NA TCGA-94-8035-01A-11R-2247-07 LPP-SEC62 1 5 chr3:188609844:+ chr3:169975608:+ INFRAME NA TCGA-94-8490-01A-11R-2326-07 IRF6-SRGAP2 3 13 chr1:209805947:- chr1:206436965:+ . NA TCGA-94-8490-01A-11R-2326-07 GCSH-PKD1L2 1 8 chr16:81096131:- chr16:81123784:- INFRAME NA TCGA-94-8491-01A-11R-2326-07 KIAA1191-NOP16 32 118 chr5:176350613:- chr5:176384374:- INFRAME NA TCGA-94-8491-01A-11R-2326-07 FAM157B-CCDC155 10 36 chr9:138231103:+ chr19:49394476:+ . NA TCGA-94-8491-01A-11R-2326-07 STIP1-MS4A18 8 34 chr11:64197974:+ chr11:60729304:+ . NA TCGA-94-8491-01A-11R-2326-07 PAXIP1-NCAPG2 7 26 chr7:154998650:- chr7:158631717:- FRAMESHIFT NA TCGA-94-8491-01A-11R-2326-07 MYO1C-SMG6 6 14 chr17:1474610:- chr17:2085901:- INFRAME NA TCGA-94-8491-01A-11R-2326-07 ARHGAP42-SBF2 2 9 chr11:100687832:+ chr11:9790683:- INFRAME NA TCGA-94-8491-01A-11R-2326-07 C2orf42-FAM136A 1 13 chr2:70248405:- chr2:70301603:- . NA TCGA-94-8491-01A-11R-2326-07 PTPN23-STAT4 1 13 chr3:47381180:+ chr2:191076325:- INFRAME NA TCGA-94-8491-01A-11R-2326-07 RPL28-GSE1 3 4 chr19:55386438:+ chr16:85357463:+ INFRAME NA TCGA-94-8491-01A-11R-2326-07 NEK7-RAB3GAP2 2 7 chr1:198157276:+ chr1:220213979:- . NA TCGA-94-8491-01A-11R-2326-07 PANK4-RGS6 1 7 chr1:2511338:- chr14:72352095:+ INFRAME NA TCGA-94-8491-01A-11R-2326-07 RAB3GAP2-NEK7 1 5 chr1:220232799:- chr1:198232553:+ . NA TCGA-94-A4VJ-01A-11R-A24Z-07 N4BP1-DDX19B 25 110 chr16:48609775:- chr16:70324585:+ INFRAME NA TCGA-94-A4VJ-01A-11R-A24Z-07 ERBB2-CTTN 4 22 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-94-A4VJ-01A-11R-A24Z-07 ZNF562-RFX2 2 10 chr19:9659379:- chr19:6047504:- . NA TCGA-94-A4VJ-01A-11R-A24Z-07 SLC25A16-NDUFA9 2 9 chr10:68487144:- chr12:4682205:+ INFRAME NA TCGA-94-A5I6-01A-21R-A27Q-07 CPT1A-LPXN 2 9 chr11:68799218:- chr11:58570713:- INFRAME NA TCGA-96-7544-01A-11R-2045-07 FNBP4-NECTIN1 48 128 chr11:47765270:- chr11:119677857:- INFRAME NA TCGA-96-7544-01A-11R-2045-07 RIC1-EPYC 14 50 chr9:5690038:+ chr12:90978262:- FRAMESHIFT NA TCGA-96-7544-01A-11R-2045-07 CCDC127-SDHA 5 13 chr5:218093:- chr5:223482:+ . NA TCGA-96-7544-01A-11R-2045-07 PPP2R5D-GLTSCR1L 2 9 chr6:42989688:+ chr6:42852092:+ INFRAME NA TCGA-96-8169-01A-11R-2296-07 PRRC2C-FMO1 26 88 chr1:171485735:+ chr1:171267543:+ . NA TCGA-96-8169-01A-11R-2296-07 NADSYN1-MYEOV 6 52 chr11:71464142:+ chr11:69341510:+ . NA TCGA-96-8170-01A-11R-2296-07 CCDC85C-IGHA1 24 0 chr14:99509323:- chr14:105708665:- . NA TCGA-96-A4JL-01A-11R-A24Z-07 EPG5-IGHJ1 7 0 chr18:45851700:- chr14:105865452:- . NA TCGA-96-A4JL-01A-11R-A24Z-07 ZFHX3-WWP2 1 13 chr16:73058530:- chr16:69840126:+ . NA TCGA-98-7454-01A-11R-2045-07 HTT-GRK4 8 72 chr4:3099394:+ chr4:3019641:+ INFRAME NA TCGA-98-8020-01A-11R-2247-07 METTL16-RFLNB 2 34 chr17:2441490:- chr17:443494:- FRAMESHIFT NA TCGA-98-8020-01A-11R-2247-07 NARS2-ALG8 2 15 chr11:78559539:- chr11:78114392:- INFRAME NA TCGA-98-8021-01A-11R-2247-07 BTBD3-MACF1 4 21 chr20:11890954:+ chr1:39250014:+ . NA TCGA-98-8021-01A-11R-2247-07 SLC24A3-MACROD2 2 6 chr20:19585544:+ chr20:15862745:+ INFRAME NA TCGA-98-8021-01A-11R-2247-07 IGF2BP2-ST6GAL1 2 4 chr3:185823153:- chr3:187072849:+ FRAMESHIFT NA TCGA-98-8021-01A-11R-2247-07 PITPNM2-KCTD3 1 3 chr12:123034513:- chr1:215618886:+ FRAMESHIFT NA TCGA-98-8022-01A-11R-2247-07 KDM4A-PTCH2 6 21 chr1:43671875:+ chr1:44820704:- FRAMESHIFT NA TCGA-98-8022-01A-11R-2247-07 ZYG11B-FGGY 2 14 chr1:52816629:+ chr1:59767190:+ . NA TCGA-98-8023-01A-11R-2247-07 ZHX2-LELP1 5 74 chr8:122781946:+ chr1:153204687:+ . NA TCGA-98-8023-01A-11R-2247-07 AFTPH-GLYATL3 10 43 chr2:64569679:+ chr6:49511952:+ . NA TCGA-98-A538-01A-11R-A262-07 EPB41L1-CNBD2 11 114 chr20:36212376:+ chr20:35995038:+ INFRAME NA TCGA-98-A539-01A-31R-A262-07 KIAA1429-FAM49B 1 3 chr8:94499374:- chr8:129970995:- . NA TCGA-98-A539-01A-31R-A262-07 ATXN10-WNT7B 1 1 chr22:45740538:+ chr22:45950146:- FRAMESHIFT NA TCGA-98-A53A-01A-11R-A262-07 FAM104A-CDC42EP4 7 81 chr17:73227165:- chr17:73286612:- . NA TCGA-98-A53A-01A-11R-A262-07 LUC7L-AXIN1 12 55 chr16:227242:- chr16:314683:- FRAMESHIFT Likely Oncogenic NA TCGA-98-A53A-01A-11R-A262-07 TMEM104-PCYT2 10 59 chr17:74785603:+ chr17:81909602:- INFRAME NA TCGA-98-A53A-01A-11R-A262-07 TAF12-TPRG1 12 35 chr1:28617953:- chr3:189310386:+ FRAMESHIFT NA TCGA-98-A53A-01A-11R-A262-07 NAPG-PIEZO2 7 25 chr18:10534496:+ chr18:10682292:- INFRAME NA TCGA-98-A53A-01A-11R-A262-07 SPPL2A-TNFAIP8L3 3 25 chr15:50736101:- chr15:51058443:- FRAMESHIFT NA TCGA-98-A53A-01A-11R-A262-07 TXNRD1-LAMTOR3 3 23 chr12:104313317:+ chr4:99882067:- INFRAME NA TCGA-98-A53A-01A-11R-A262-07 USP37-DIRC3 3 17 chr2:218529956:- chr2:217434116:- . NA TCGA-98-A53A-01A-11R-A262-07 CAMK2D-ANK2 4 9 chr4:113509638:- chr4:113381457:+ INFRAME NA TCGA-98-A53A-01A-11R-A262-07 NFE2L2-GPR37L1 1 4 chr2:177264532:- chr1:202127741:+ INFRAME NA TCGA-98-A53B-01A-11R-A262-07 ATG5-EPHA7 21 97 chr6:106308364:- chr6:93272422:- FRAMESHIFT NA TCGA-98-A53B-01A-11R-A262-07 PREP-POPDC3 9 34 chr6:105397853:- chr6:105162160:- . NA TCGA-98-A53B-01A-11R-A262-07 IL1RAP-COL6A5 4 22 chr3:190564353:+ chr3:130373611:+ . NA TCGA-98-A53B-01A-11R-A262-07 KAT6A-SMIM19 4 16 chr8:42048378:- chr8:42548656:+ FRAMESHIFT NA TCGA-98-A53B-01A-11R-A262-07 ATG7-RSPH3 2 9 chr3:11299416:+ chr6:158982688:- FRAMESHIFT NA TCGA-98-A53B-01A-11R-A262-07 SLC3A1-CAMKMT 1 6 chr2:44286157:+ chr2:44390241:+ FRAMESHIFT NA TCGA-98-A53C-01A-11R-A262-07 TMCO3-SPACA7 3 38 chr13:113510424:+ chr13:112393021:+ INFRAME NA TCGA-98-A53H-01A-12R-A262-07 DNAJB6-AGT 4 14 chr7:157385611:+ chr1:230706200:- INFRAME NA TCGA-98-A53I-01A-31R-A262-07 PRKACA-ASF1B 4 20 chr19:14093136:- chr19:14126238:- . NA TCGA-98-A53I-01A-31R-A262-07 SETMAR-EYS 1 5 chr3:4303526:+ chr6:65405367:- FRAMESHIFT NA TCGA-J1-A4AH-01A-31R-A24H-07 CEP192-AFG3L2 4 29 chr18:13001582:+ chr18:12329783:- FRAMESHIFT NA TCGA-J1-A4AH-01A-31R-A24H-07 NCKAP5-ARHGEF4 1 6 chr2:133517458:- chr2:131027945:+ INFRAME NA TCGA-L3-A524-01A-11R-A262-07 RBM38-FRMD4B 139 853 chr20:57393333:+ chr3:69218379:- INFRAME NA TCGA-L3-A524-01A-11R-A262-07 PLXNC1-CRADD 18 67 chr12:94265225:+ chr12:93849970:+ FRAMESHIFT NA TCGA-L3-A524-01A-11R-A262-07 F11R-PFDN2 5 113 chr1:160998827:- chr1:161102375:- . NA TCGA-L3-A524-01A-11R-A262-07 PITPNB-TANGO2 21 42 chr22:27858387:- chr22:20036760:+ . NA TCGA-L3-A524-01A-11R-A262-07 UBE2K-LIAS 10 54 chr4:39737511:+ chr4:39470017:+ . NA TCGA-L3-A524-01A-11R-A262-07 TMEM25-CD3G 10 50 chr11:118534129:+ chr11:118349743:+ INFRAME NA TCGA-L3-A524-01A-11R-A262-07 EPS8-MED21 9 51 chr12:15789161:- chr12:27046154:+ . NA TCGA-L3-A524-01A-11R-A262-07 DHRS4L2-OVAAL 7 49 chr14:23989075:+ chr1:180566178:+ . NA TCGA-L3-A524-01A-11R-A262-07 MSI2-SYNPO2 5 23 chr17:57401471:+ chr4:119023430:+ INFRAME NA TCGA-L3-A524-01A-11R-A262-07 RBM6-FAM212A 5 10 chr3:49940225:+ chr3:49804181:+ . NA TCGA-L3-A524-01A-11R-A262-07 ZBTB25-TPRG1 2 21 chr14:64503661:- chr3:189238733:+ . NA TCGA-L3-A524-01A-11R-A262-07 CASC3-ERBB2 4 12 chr17:40141607:+ chr17:39688696:+ . NA TCGA-L3-A524-01A-11R-A262-07 RALGPS1-LMX1B 2 9 chr9:126965951:+ chr9:126690836:+ FRAMESHIFT NA TCGA-L3-A524-01A-11R-A262-07 PIK3CA-YLPM1 3 1 chr3:179148603:+ chr14:74835265:+ . NA TCGA-L3-A524-01A-11R-A262-07 F11R-SPTA1 1 8 chr1:161021010:- chr1:158661409:- INFRAME NA TCGA-L3-A524-01A-11R-A262-07 NUMB-IFI16 1 5 chr14:73297211:- chr1:159045297:+ INFRAME NA TCGA-L3-A524-01A-11R-A262-07 ABI2-MAIP1 1 2 chr2:203367044:+ chr2:199955497:+ . NA TCGA-L3-A524-01A-11R-A262-07 ADPGK-BBS4 1 2 chr15:72760407:- chr15:72722794:+ FRAMESHIFT NA TCGA-L3-A524-01A-11R-A262-07 MFN1-KMT2C 1 1 chr3:179352035:+ chr7:152224179:- INFRAME Likely Oncogenic NA TCGA-LA-A446-01A-21R-A24Z-07 HCFC1-EPHA5 2 6 chrX:153970648:- chr4:65324219:- FRAMESHIFT NA TCGA-LA-A446-01A-21R-A24Z-07 GPC6-ITGBL1 1 2 chr13:93545421:+ chr13:101567699:+ INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 FAM98C-BLVRB 85 146 chr19:38403694:+ chr19:40458545:- INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 SLBP-LETM1 19 61 chr4:1711874:- chr4:1815802:- INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 ROCK1-CDH2 18 61 chr18:20991176:- chr18:27952359:- FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 PCNX3-PACS1 16 54 chr11:65623644:+ chr11:66238804:+ INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 ATP5L-UBE4A 14 59 chr11:118407097:+ chr11:118396314:+ FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 URM1-C9orf3 12 22 chr9:128371415:+ chr9:95060694:+ FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 BTBD10-PTH 7 41 chr11:13463092:- chr11:13496173:- . NA TCGA-LA-A7SW-01A-11R-A405-07 EIF2S2-ADRA1D 10 23 chr20:34090517:- chr20:4222130:- INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 CTCF-E2F4 6 19 chr16:67571264:+ chr16:67194686:+ . Likely Oncogenic NA TCGA-LA-A7SW-01A-11R-A405-07 MIGA1-IFI44L 2 35 chr1:77815231:+ chr1:78641021:+ INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 CERS5-LIMA1 4 19 chr12:50167101:- chr12:50182037:- FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 MAP4K5-ATP5S 1 28 chr14:50475077:- chr14:50321483:+ FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 MNAT1-AP5M1 4 13 chr14:60879835:+ chr14:57274244:+ INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 ST6GALNAC3-AK5 3 10 chr1:76074884:+ chr1:77483317:+ INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 KPNA6-ZCCHC17 3 9 chr1:32108134:+ chr1:31319109:+ FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 ALOX12P2-FBXO39 4 4 chr17:6899985:+ chr17:6786780:+ . NA TCGA-LA-A7SW-01A-11R-A405-07 LUC7L3-FLJ40194 3 7 chr17:50746702:+ chr17:49252246:+ . NA TCGA-LA-A7SW-01A-11R-A405-07 PHF21A-CKAP5 2 8 chr11:45965315:- chr11:46783368:- INFRAME NA TCGA-LA-A7SW-01A-11R-A405-07 YIF1A-CTSF 1 6 chr11:66287598:- chr11:66568082:- FRAMESHIFT NA TCGA-LA-A7SW-01A-11R-A405-07 ZNF652-PHB 1 6 chr17:49362413:- chr17:49413291:- . NA TCGA-LA-A7SW-01A-11R-A405-07 ODF2-URM1 1000 1000 chr9:128460554:+ chr9:128371319:+ . NA TCGA-LA-A7SW-01A-11R-A405-07 MARK3-EIF5 1000 1000 chr14:103386080:+ chr14:103335653:+ . NA TCGA-NC-A5HD-01A-11R-A26W-07 ARL13B-NSUN3 1 8 chr3:94003908:+ chr3:94126211:+ INFRAME NA TCGA-NC-A5HD-01A-11R-A26W-07 CHEK2-C22orf31 1 5 chr22:28734403:- chr22:29060843:- FRAMESHIFT NA TCGA-NC-A5HE-01A-11R-A26W-07 WDR18-HN1L 8 11 chr19:985975:+ chr16:1697834:+ FRAMESHIFT NA TCGA-NC-A5HE-01A-11R-A26W-07 HN1L-WDR18 3 21 chr16:1699047:+ chr19:989762:+ . NA TCGA-NC-A5HE-01A-11R-A26W-07 NAB1-GULP1 2 5 chr2:190673152:+ chr2:188584265:+ INFRAME NA TCGA-NC-A5HF-01A-11R-A26W-07 P4HB-L3MBTL4 7 74 chr17:81855142:- chr18:6093528:- FRAMESHIFT NA TCGA-NC-A5HG-01A-11R-A26W-07 EPAS1-CRIPT 5 7 chr2:46297937:+ chr2:46618773:+ FRAMESHIFT NA TCGA-NC-A5HH-01A-11R-A26W-07 AHNAK-NXF1 18 77 chr11:62533661:- chr11:62792701:- FRAMESHIFT NA TCGA-NC-A5HH-01A-11R-A26W-07 MED23-RNF217 6 11 chr6:131587709:- chr6:125045211:+ INFRAME NA TCGA-NC-A5HH-01A-11R-A26W-07 FLNA-MTCP1 2 25 chrX:154367397:- chrX:155064033:- . NA TCGA-NC-A5HH-01A-11R-A26W-07 FLNA-CMC4 2 16 chrX:154367397:- chrX:155064033:- . NA TCGA-NC-A5HH-01A-11R-A26W-07 SPATA2L-FANCA 2 13 chr16:89698195:- chr16:89745071:- INFRAME Likely Oncogenic NA TCGA-NC-A5HI-01A-11R-A26W-07 CDC42BPB-ZFYVE1 9 38 chr14:102986487:- chr14:72998315:- INFRAME NA TCGA-NC-A5HI-01A-11R-A26W-07 ITGA9-CTDSPL 1 8 chr3:37629336:+ chr3:37947057:+ FRAMESHIFT NA TCGA-NC-A5HI-01A-11R-A26W-07 FCF1-FOXN3 1 4 chr14:74713552:+ chr14:89350808:- FRAMESHIFT NA TCGA-NC-A5HJ-01A-11R-A26W-07 C6orf132-TRERF1 14 229 chr6:42101852:- chr6:42232892:- . NA TCGA-NC-A5HJ-01A-11R-A26W-07 CAPN13-GALNT14 31 105 chr2:30758046:- chr2:30924823:- INFRAME NA TCGA-NC-A5HJ-01A-11R-A26W-07 WSB1-TRIM80P 3 13 chr17:27304911:+ chr17:75074604:+ . NA TCGA-NC-A5HJ-01A-11R-A26W-07 SLC1A1-SMARCA2 2 15 chr9:4490770:+ chr9:2096657:+ FRAMESHIFT NA TCGA-NC-A5HJ-01A-11R-A26W-07 FADS1-TMEM138 1 17 chr11:61813243:- chr11:61367923:+ INFRAME NA TCGA-NC-A5HJ-01A-11R-A26W-07 GON4L-MEX3A 2 10 chr1:155853276:- chr1:156077682:- INFRAME NA TCGA-NC-A5HJ-01A-11R-A26W-07 NRF1-ADAD2 1 12 chr7:129611824:+ chr16:84194442:+ . NA TCGA-NC-A5HJ-01A-11R-A26W-07 YTHDF2-RAB42 4 0 chr1:28743986:+ chr1:28593694:+ FRAMESHIFT NA TCGA-NC-A5HJ-01A-11R-A26W-07 CCND3-TRERF1 1 11 chr6:42048501:- chr6:42300749:- . NA TCGA-NC-A5HJ-01A-11R-A26W-07 C12orf65-SLC11A2 2 2 chr12:123233531:+ chr12:51010766:- . NA TCGA-NC-A5HJ-01A-11R-A26W-07 PHF11-SETDB2 1 6 chr13:49524216:+ chr13:49480219:+ FRAMESHIFT NA TCGA-NC-A5HK-01A-11R-A26W-07 MLKL-TMEM231 7 47 chr16:74672268:- chr16:75539884:- . NA TCGA-NC-A5HK-01A-11R-A26W-07 CLCF1-PPP1CA 2 36 chr11:67373524:- chr11:67401199:- INFRAME NA TCGA-NC-A5HK-01A-11R-A26W-07 ABHD16A-LY6G6F 4 18 chr6:31700942:- chr6:31707458:+ INFRAME NA TCGA-NC-A5HK-01A-11R-A26W-07 PSD3-INTS10 1 12 chr8:18936034:- chr8:19819573:+ FRAMESHIFT NA TCGA-NC-A5HK-01A-11R-A26W-07 C2CD5-CMAS 1 2 chr12:22544061:- chr12:22055149:+ FRAMESHIFT NA TCGA-NC-A5HL-01A-11R-A26W-07 DGUOK-STAMBP 36 264 chr2:73946906:+ chr2:73870143:+ . NA TCGA-NC-A5HL-01A-11R-A26W-07 DPF2-CFL1 11 18 chr11:65333918:+ chr11:65826609:- . NA TCGA-NC-A5HL-01A-11R-A26W-07 TNS1-MIR6513 10 12 chr2:217907210:- chr2:218280126:- . NA TCGA-NC-A5HL-01A-11R-A26W-07 LRRC8D-TMEM9 5 21 chr1:89821291:+ chr1:201146848:- . NA TCGA-NC-A5HL-01A-11R-A26W-07 SIL1-SMC1B 3 7 chr5:139196441:- chr22:45383613:- . NA TCGA-NC-A5HL-01A-11R-A26W-07 METTL4-STXBP5L 2 4 chr18:2544195:- chr3:121223003:+ FRAMESHIFT NA TCGA-NC-A5HL-01A-11R-A26W-07 RASA2-SPSB4 1 5 chr3:141540609:+ chr3:141147142:+ FRAMESHIFT NA TCGA-NC-A5HM-01A-12R-A26W-07 COX7B2-PIP4K2A 2 3 chr4:46909160:- chr10:22609717:- . NA TCGA-NC-A5HM-01A-12R-A26W-07 SMARCA4-KDM4B 1 6 chr19:10989443:+ chr19:5071010:+ FRAMESHIFT Likely Oncogenic NA TCGA-NC-A5HM-01A-12R-A26W-07 PTPN4-GRID1 1 5 chr2:119809991:+ chr10:85729614:- INFRAME NA TCGA-NC-A5HN-01A-11R-A26W-07 GNB1-NADK 21 4 chr1:1890820:- chr1:1765446:- . NA TCGA-NC-A5HN-01A-11R-A26W-07 FBXO17-ACTN4 2 38 chr19:38975586:- chr19:38700600:+ . NA TCGA-NC-A5HN-01A-11R-A26W-07 RTKN-CTF1 2 21 chr2:74441706:- chr16:30899415:+ FRAMESHIFT NA TCGA-NC-A5HN-01A-11R-A26W-07 EHBP1-VAV2 3 12 chr2:62874532:+ chr9:133861432:- INFRAME NA TCGA-NC-A5HN-01A-11R-A26W-07 TMCC1-QSOX2 2 8 chr3:129827803:- chr9:136224909:- INFRAME NA TCGA-NC-A5HP-01A-11R-A26W-07 KIAA1217-LPP 1 7 chr10:24239337:+ chr3:188524665:+ . NA TCGA-NC-A5HP-01A-11R-A26W-07 FAM86JP-POPDC2 1 4 chr3:125920905:+ chr3:119654613:- . NA TCGA-NC-A5HQ-01A-11R-A26W-07 SARNP-VAMP8 30 99 chr12:55789075:- chr2:85579009:+ INFRAME NA TCGA-NC-A5HQ-01A-11R-A26W-07 ALDH3A1-ULK2 1 4 chr17:19748259:- chr17:19826186:- . NA TCGA-NC-A5HR-01A-21R-A26W-07 SLC35A3-C1orf194 1 37 chr1:99970162:+ chr1:109106659:- . NA TCGA-NC-A5HR-01A-21R-A26W-07 ZNF521-PVT1 1 9 chr18:25224345:- chr8:128096518:+ . NA TCGA-NC-A5HT-01A-11R-A26W-07 BMP2K-CDS1 6 5 chr4:78776721:+ chr4:84631819:+ INFRAME NA TCGA-NC-A5HT-01A-11R-A26W-07 SMO-TSPAN33 1 10 chr7:129189482:+ chr7:129161679:+ FRAMESHIFT NA TCGA-NC-A5HT-01A-11R-A26W-07 INPP4B-NAA15 1 6 chr4:142402938:- chr4:139334174:+ INFRAME Likely Oncogenic NA TCGA-NC-A5HT-01A-11R-A26W-07 WDHD1-GCH1 1 5 chr14:55026711:- chr14:54865436:- FRAMESHIFT NA TCGA-NK-A5CR-01A-11R-A26W-07 FGF12-ZNF595 4 3 chr3:192727181:- chr4:59430:+ FRAMESHIFT NA TCGA-NK-A5CR-01A-11R-A26W-07 MAP3K4-FRMD1 1 4 chr6:160992083:+ chr6:168079024:- FRAMESHIFT NA TCGA-NK-A5CR-01A-11R-A26W-07 TACC1-ADAM9 1 4 chr8:38788819:+ chr8:39041946:+ FRAMESHIFT NA TCGA-NK-A5CT-01A-31R-A26W-07 KAT2B-TACC1P1 1 5 chr3:20072459:+ chr10:37523011:+ . NA TCGA-NK-A5CX-01A-11R-A26W-07 KLHL22-DENND5A 1 8 chr22:20495760:- chr11:9207632:- . NA TCGA-NK-A7XE-01A-12R-A405-07 INTS5-C11orf98 8 78 chr11:62653170:- chr11:62663333:- INFRAME NA TCGA-NK-A7XE-01A-12R-A405-07 INTS5-LBHD1 8 78 chr11:62653170:- chr11:62663333:- FRAMESHIFT NA TCGA-O2-A52N-01A-11R-A26W-07 RBP1-NMNAT3 4 10 chr3:139518421:- chr3:139579055:- FRAMESHIFT NA TCGA-O2-A52N-01A-11R-A26W-07 HARS-TMCO6 4 6 chr5:140676654:- chr5:140639739:+ INFRAME NA TCGA-O2-A52N-01A-11R-A26W-07 URGCP-UPP1 2 13 chr7:43926132:- chr7:48094763:+ . NA TCGA-O2-A52N-01A-11R-A26W-07 LANCL2-CHODL 1 6 chr7:55366229:+ chr21:18256509:+ INFRAME NA TCGA-O2-A52N-01A-11R-A26W-07 EGFR-CHODL 1 5 chr7:55019365:+ chr21:18256509:+ INFRAME Likely Oncogenic NA TCGA-O2-A52Q-01A-11R-A26W-07 EIF3G-ZNF560 1 10 chr19:10116800:- chr19:9475369:- . NA TCGA-O2-A52S-01A-11R-A262-07 DUSP14-ATP6V0A1 20 298 chr17:37489952:+ chr17:42477638:+ . NA TCGA-O2-A52S-01A-11R-A262-07 PIK3AP1-TM9SF3 4 11 chr10:96709567:- chr10:96565426:- INFRAME NA TCGA-O2-A52S-01A-11R-A262-07 MAP3K3-FCHSD2 3 14 chr17:63632802:+ chr11:73015885:- INFRAME NA TCGA-O2-A52S-01A-11R-A262-07 TNRC6A-METTL9 1 20 chr16:24729846:+ chr16:21655227:+ FRAMESHIFT NA TCGA-O2-A52S-01A-11R-A262-07 PHLDB2-TAGLN3 1000 1000 chr3:111920419:+ chr3:112011763:+ FRAMESHIFT NA TCGA-O2-A52V-01A-31R-A262-07 ATP10D-GABRA2 20 79 chr4:47525642:+ chr4:46250604:- FRAMESHIFT NA TCGA-O2-A52V-01A-31R-A262-07 CUL3-SPAG16 12 72 chr2:224495832:- chr2:213310059:+ INFRAME NA TCGA-O2-A52V-01A-31R-A262-07 SPAG16-CUL3 7 59 chr2:213297357:+ chr2:224482078:- INFRAME NA TCGA-O2-A52V-01A-31R-A262-07 PRIM2-NKAIN2 3 24 chr6:57326045:+ chr6:124355267:+ INFRAME NA TCGA-O2-A52V-01A-31R-A262-07 ACIN1-SHTN1 4 17 chr14:23090522:- chr10:116940612:- FRAMESHIFT NA TCGA-O2-A5IB-01A-11R-A27Q-07 EXOSC7-ZDHHC3 26 70 chr3:44976334:+ chr3:44959460:- . NA TCGA-O2-A5IB-01A-11R-A27Q-07 ZNF75D-UBR2 7 65 chrX:135341768:- chr6:42659656:+ . NA TCGA-O2-A5IB-01A-11R-A27Q-07 BUB1B-PCM1 2 22 chr15:40176673:+ chr8:17985447:+ FRAMESHIFT NA TCGA-O2-A5IB-01A-11R-A27Q-07 UBAP1-UNC13B 2 16 chr9:34220948:+ chr9:35258993:+ INFRAME NA TCGA-O2-A5IB-01A-11R-A27Q-07 PPP6R3-MGAM 1 12 chr11:68519651:+ chr7:142005529:+ . NA TCGA-XC-AA0X-01A-32R-A405-07 UBA6-TMPRSS11D 2 5 chr4:67629071:- chr4:67859678:- FRAMESHIFT NA TCGA-XC-AA0X-01A-32R-A405-07 ZNF850-WTIP 1 7 chr19:36762305:- chr19:34490376:+ INFRAME NA TCGA-3H-AB3L-01A-11R-A40A-07 INO80C-POLA1 2 1 chr18:35497719:- chrX:24888006:+ INFRAME NA TCGA-3H-AB3M-01A-11R-A40A-07 SEPT9-COL7A1 36 166 chr17:77307197:+ chr3:48586689:- FRAMESHIFT NA TCGA-3H-AB3M-01A-11R-A40A-07 VCAN-GABRA5 18 108 chr5:83553522:+ chr15:26943215:+ INFRAME NA TCGA-3H-AB3M-01A-11R-A40A-07 MLXIP-APTR 13 48 chr12:122079266:+ chr7:77661333:- . NA TCGA-3H-AB3M-01A-11R-A40A-07 EPB42-RPUSD2 9 10 chr15:43203115:- chr15:40571604:+ INFRAME NA TCGA-3H-AB3M-01A-11R-A40A-07 MAPKBP1-EPB42 5 16 chr15:41775389:+ chr15:43203275:- FRAMESHIFT NA TCGA-3H-AB3M-01A-11R-A40A-07 ZCCHC8-PTPN12 4 7 chr12:122480190:- chr7:77632348:+ FRAMESHIFT NA TCGA-3H-AB3M-01A-11R-A40A-07 MAPKBP1-RPUSD2 3 10 chr15:41775389:+ chr15:40571604:+ INFRAME NA TCGA-3H-AB3M-01A-11R-A40A-07 PGM1-CHN1 1 6 chr1:63651852:+ chr2:174811588:- FRAMESHIFT NA TCGA-3H-AB3M-01A-11R-A40A-07 SKIV2L2-CKS1B 2 2 chr5:55340184:+ chr1:154977987:+ FRAMESHIFT NA TCGA-3H-AB3S-01A-21R-A40A-07 CEP63-AGPS 6 26 chr3:134552012:+ chr2:177538074:+ FRAMESHIFT NA TCGA-3H-AB3S-01A-21R-A40A-07 ARHGEF10-ADGB 4 10 chr8:1843436:+ chr6:146700941:+ FRAMESHIFT NA TCGA-3H-AB3S-01A-21R-A40A-07 MGA-WDR66 2 8 chr15:41757839:+ chr12:121942534:+ FRAMESHIFT Likely Oncogenic NA TCGA-3H-AB3U-01A-21R-A40A-07 MSL2-MECOM 1 6 chr3:136194972:- chr3:169149755:- . NA TCGA-3U-A98D-01A-12R-A40A-07 ATP11A-COL14A1 7 16 chr13:112690455:+ chr8:120147806:+ . NA TCGA-3U-A98D-01A-12R-A40A-07 UBAP2L-AQP10 1000 1000 chr1:154228725:+ chr1:154322982:+ FRAMESHIFT NA TCGA-3U-A98F-01A-11R-A40A-07 FAM19A4-COL8A1 2 2 chr3:68932240:- chr3:99744897:+ . NA TCGA-3U-A98H-01A-11R-A40A-07 RPAP1-IGKJ4 13 0 chr15:41522907:- chr2:88860920:- INFRAME NA TCGA-3U-A98H-01A-11R-A40A-07 ITGA9-NDUFA8 1 12 chr3:37732798:+ chr9:122144378:- INFRAME NA TCGA-3U-A98I-01A-11R-A40A-07 RAD51D-MAP2K4 4 1 chr17:35101201:- chr17:12081356:+ FRAMESHIFT Likely Oncogenic NA TCGA-3U-A98I-01A-11R-A40A-07 RAD51L3-RFFL-MAP2K4 4 1 chr17:35101201:- chr17:12081356:+ FRAMESHIFT Likely Oncogenic NA TCGA-3U-A98I-01A-11R-A40A-07 CACNA2D1-HGF 1 3 chr7:82005423:- chr7:81758804:- FRAMESHIFT NA TCGA-LK-A4NY-01A-11R-A34F-07 AKAP13-CASC4 13 19 chr15:85585823:+ chr15:44331988:+ FRAMESHIFT NA TCGA-LK-A4NY-01A-11R-A34F-07 CEL-IGHJ4 9 0 chr9:133071611:+ chr14:105864250:- FRAMESHIFT NA TCGA-LK-A4NY-01A-11R-A34F-07 ALPK1-GALNTL6 3 6 chr4:112297469:+ chr4:172882790:+ . NA TCGA-LK-A4NY-01A-11R-A34F-07 TENM2-RALGPS1 1 3 chr5:167993182:+ chr9:127210695:+ FRAMESHIFT NA TCGA-LK-A4O0-01A-11R-A34F-07 CRIM1-AFF3 1 7 chr2:36442735:+ chr2:99752301:- FRAMESHIFT NA TCGA-LK-A4O5-01A-11R-A34F-07 ACY1-BAP1 9 15 chr3:51987624:+ chr3:52407460:- INFRAME Likely Oncogenic NA TCGA-LK-A4O5-01A-11R-A34F-07 IFT74-HECTD4 7 6 chr9:26962087:+ chr12:112183266:- INFRAME NA TCGA-LK-A4O5-01A-11R-A34F-07 MTAP-LINGO2 1 18 chr9:21854870:+ chr9:28476025:- . NA TCGA-LK-A4O5-01A-11R-A34F-07 MLLT3-SYT10 1 17 chr9:20620654:- chr12:33407356:- FRAMESHIFT NA TCGA-LK-A4O5-01A-11R-A34F-07 PBX3-SH3GL2 2 13 chr9:125748623:+ chr9:17747066:+ FRAMESHIFT NA TCGA-LK-A4O7-01A-11R-A34F-07 NF2-PIAS1 2 12 chr22:29604112:+ chr15:68086306:+ INFRAME Likely Oncogenic NA TCGA-LK-A4O7-01A-11R-A34F-07 FRMD6-GNG2 1 6 chr14:51651996:+ chr14:51950650:+ . NA TCGA-LK-A4O7-01A-11R-A34F-07 GRAMD2-SENP8 1 2 chr15:72162273:- chr15:72139577:+ . NA TCGA-MQ-A4KX-01A-11R-A34F-07 MYO6-CRYL1 6 8 chr6:75749423:+ chr13:20413387:- . NA TCGA-MQ-A4LC-01A-31R-A34F-07 BAP1-TCEA3 5 55 chr3:52405765:- chr1:23419139:- FRAMESHIFT Likely Oncogenic NA TCGA-MQ-A4LC-01A-31R-A34F-07 PRR15L-CDK5RAP3 10 28 chr17:47957657:- chr17:47973519:+ . NA TCGA-MQ-A4LJ-01A-11R-A34F-07 CHD9-MMP2 5 20 chr16:53055077:+ chr16:55464552:+ . NA TCGA-MQ-A4LM-01A-11R-A34F-07 ZFP1-TERF2IP 4 17 chr16:75148643:+ chr16:75760050:+ . NA TCGA-MQ-A4LM-01A-11R-A34F-07 ZNF589-LRRFIP2 2 4 chr3:48260939:+ chr3:37149038:- . NA TCGA-MQ-A4LM-01A-11R-A34F-07 PBRM1-FBXW12 1 4 chr3:52558249:- chr3:48375354:+ INFRAME Likely Oncogenic NA TCGA-MQ-A4LM-01A-11R-A34F-07 C1orf112-OR5H14 1000 1000 chr1:169683625:+ chr3:98149368:+ . NA TCGA-MQ-A4LP-01A-11R-A34F-07 ATRX-ARHGEF9 16 74 chrX:77785982:- chrX:63655737:- FRAMESHIFT Likely Oncogenic NA TCGA-MQ-A4LP-01A-11R-A34F-07 C19orf25-PEPD 8 24 chr19:1478774:- chr19:33391479:- INFRAME NA TCGA-MQ-A4LP-01A-11R-A34F-07 ZNF780A-SAMD4B 3 4 chr19:40081819:- chr19:39369655:+ INFRAME NA TCGA-MQ-A4LV-01A-11R-A34F-07 ST5-HBG2 2 5 chr11:8910821:- chr11:5255165:- . NA TCGA-MQ-A6BR-01A-11R-A34F-07 RPL19-ITLN1 1 1 chr17:39201319:+ chr1:160876816:- FRAMESHIFT NA TCGA-NQ-A638-01A-11R-A34F-07 PTRF-TUBBP9 5 30 chr17:42422627:- chr6:39999492:+ . NA TCGA-SC-A6LM-01A-11R-A34F-07 PLEKHG1-GJA1 7 13 chr6:150768738:+ chr6:121446832:+ . NA TCGA-SC-A6LM-01A-11R-A34F-07 TASP1-TRDN 3 4 chr20:13629934:- chr6:123279082:- INFRAME NA TCGA-SC-A6LM-01A-11R-A34F-07 MAN1A1-MCM9 3 3 chr6:119179857:- chr6:118934990:- . NA TCGA-SC-A6LM-01A-11R-A34F-07 SETD2-MACROD2 2 5 chr3:47083720:- chr20:14085621:+ FRAMESHIFT Likely Oncogenic NA TCGA-SC-A6LM-01A-11R-A34F-07 PARK2-SMOX 1 5 chr6:161548854:- chr20:4175030:+ . NA TCGA-SC-A6LN-01A-11R-A34F-07 ETV6-CIDEA 70 171 chr12:11650160:+ chr18:12274093:+ INFRAME Likely Oncogenic NA TCGA-SC-A6LN-01A-11R-A34F-07 RTTN-DOK6 2 9 chr18:70166062:- chr18:69757756:+ INFRAME NA TCGA-SC-A6LQ-01A-11R-A34F-07 LRRC1-HSP90AB1 2 3 chr6:53795415:+ chr6:44248630:+ INFRAME NA TCGA-SC-A6LR-01A-11R-A34F-07 ITLN1-C3 1 42 chr1:160883428:- chr19:6702579:- INFRAME NA TCGA-SH-A7BC-01A-11R-A34F-07 VLDLR-SLC1A1 8 11 chr9:2622271:+ chr9:4544567:+ INFRAME NA TCGA-SH-A7BC-01A-11R-A34F-07 LRP12-SLC25A32 4 1 chr8:104588819:- chr8:103407784:- INFRAME NA TCGA-SH-A7BD-01A-11R-A34F-07 BAP1-RILP 98 197 chr3:52409554:- chr17:1648495:- FRAMESHIFT Likely Oncogenic NA TCGA-SH-A7BD-01A-11R-A34F-07 DCTN1-WDR54 12 11 chr2:74391794:- chr2:74422870:+ . NA TCGA-SH-A7BD-01A-11R-A34F-07 CDC123-HK1 7 7 chr10:12198776:+ chr10:69376934:+ INFRAME NA TCGA-SH-A7BD-01A-11R-A34F-07 TNXB-DDR1 3 21 chr6:32061397:- chr6:30897379:+ FRAMESHIFT NA TCGA-SH-A7BD-01A-11R-A34F-07 CATSPERG-RASSF1 2 9 chr19:38337504:+ chr3:50332154:- INFRAME NA TCGA-SH-A7BD-01A-11R-A34F-07 C4A-TNXB 1 6 chr6:31984408:+ chr6:32058390:- INFRAME NA TCGA-SH-A9CT-01A-11R-A40A-07 CFAP54-CCDC60 1 3 chr12:96522189:+ chr12:119488759:+ FRAMESHIFT NA TCGA-SH-A9CU-01A-11R-A40A-07 SIPA1L2-NTPCR 4 15 chr1:232493527:- chr1:232978163:+ INFRAME NA TCGA-SH-A9CU-01A-11R-A40A-07 TBCE-SIPA1L2 4 5 chr1:235367504:+ chr1:232493660:- . NA TCGA-SH-A9CU-01A-11R-A40A-07 RNF111-MAPKAP1 3 8 chr15:58988068:+ chr9:125585727:- . NA TCGA-TS-A7OY-01A-11R-A34F-07 LRRC40-MINOS1 2 33 chr1:70205390:- chr1:19623474:+ INFRAME NA TCGA-TS-A7OY-01A-11R-A34F-07 APBA2-OCA2 3 19 chr15:28921749:+ chr15:27851475:- . NA TCGA-TS-A7OY-01A-11R-A34F-07 PDE4D-PLK2 1 4 chr5:59038859:- chr5:58459092:- INFRAME NA TCGA-TS-A7OZ-01A-21R-A40A-07 NRIP1-IGSF8 6 15 chr21:15014344:- chr1:160092695:- . NA TCGA-TS-A7OZ-01A-21R-A40A-07 MAPKBP1-EHD4 5 13 chr15:41799914:+ chr15:41909863:- FRAMESHIFT NA TCGA-TS-A7OZ-01A-21R-A40A-07 STK33-CHRNB4 4 10 chr11:8440678:- chr15:78708105:- . NA TCGA-TS-A7OZ-01A-21R-A40A-07 EVA1C-TCP10L 2 7 chr21:32413013:+ chr21:32582415:- FRAMESHIFT NA TCGA-TS-A7OZ-01A-21R-A40A-07 MGA-PLA2G4D 2 3 chr15:41750615:+ chr15:42081133:- INFRAME Likely Oncogenic NA TCGA-TS-A7OZ-01A-21R-A40A-07 UNC5B-ADAP2 1 5 chr10:71287765:+ chr17:30944907:+ FRAMESHIFT NA TCGA-TS-A7P0-01A-11R-A34F-07 PRRC2A-FKBPL 3 72 chr6:31634557:+ chr6:32129854:- . NA TCGA-TS-A7P0-01A-11R-A34F-07 EML3-INTS5 6 8 chr11:62605113:- chr11:62649999:- INFRAME NA TCGA-TS-A7P0-01A-11R-A34F-07 SLC35A4-MTSS1 6 8 chr5:140565971:+ chr8:124591235:- FRAMESHIFT NA TCGA-TS-A7P0-01A-11R-A34F-07 RIOK3-C18orf8 1000 1000 chr18:23463079:+ chr18:23531625:+ FRAMESHIFT NA TCGA-TS-A7P1-01A-41R-A40A-07 SHB-CDKN2A 37 83 chr9:38067929:- chr9:21968242:- FRAMESHIFT Likely Oncogenic NA TCGA-TS-A7P1-01A-41R-A40A-07 ZDHHC14-FKBP5 4 9 chr6:157382266:+ chr6:35720548:- . NA TCGA-TS-A7P1-01A-41R-A40A-07 CDKN2A-FASTKD3 2 7 chr9:21994139:- chr5:7865983:- INFRAME Likely Oncogenic NA TCGA-TS-A7P1-01A-41R-A40A-07 PAPD7-MTRR 1 3 chr5:6714699:+ chr5:7889095:+ FRAMESHIFT NA TCGA-TS-A7P3-01A-12R-A34F-07 CLDND1-ARPP21 4 7 chr3:98522849:- chr3:35679787:+ . NA TCGA-TS-A7P6-01A-21R-A34F-07 PTBP1-SCGB1C1 1 10 chr19:799443:+ chr11:193712:+ FRAMESHIFT NA TCGA-TS-A7P6-01A-21R-A34F-07 C16orf70-SLC9A5 1 7 chr16:67145419:+ chr16:67262212:+ . NA TCGA-TS-A7P8-01A-11R-A34F-07 FOXP1-SRGAP3-AS4 6 26 chr3:71299820:- chr3:9256759:+ . Likely Oncogenic NA TCGA-TS-A7P8-01A-11R-A34F-07 ACOX3-STAT1 3 22 chr4:8440648:- chr2:190998308:- . NA TCGA-TS-A7P8-01A-11R-A34F-07 ANKRD44-ANKAR 1 5 chr2:197310578:- chr2:189706938:+ FRAMESHIFT NA TCGA-TS-A8AI-01A-11R-A40A-07 FRMD4A-FAM107B 7 22 chr10:14330058:- chr10:14530515:- FRAMESHIFT NA TCGA-TS-A8AI-01A-11R-A40A-07 NF2-CABP7 2 4 chr22:29604112:+ chr22:29727662:+ FRAMESHIFT Likely Oncogenic NA TCGA-TS-A8AV-01A-12R-A40A-07 ARPC2-RNASEH2B 6 21 chr2:218249921:+ chr13:50945427:+ FRAMESHIFT NA TCGA-TS-A8AV-01A-12R-A40A-07 FAM124A-SPRYD7 1 4 chr13:51222569:+ chr13:49928085:- FRAMESHIFT NA TCGA-TS-A8AY-01A-21R-A40A-07 ABO-HTR3B 15 89 chr9:133252478:- chr11:113931384:+ . NA TCGA-TS-A8AY-01A-21R-A40A-07 FAM216A-IGF1 12 66 chr12:110473118:+ chr12:102419690:- INFRAME NA TCGA-TS-A8AY-01A-21R-A40A-07 TAX1BP1-RABGEF1 9 40 chr7:27769834:+ chr7:66795511:+ . NA TCGA-TS-A8AY-01A-21R-A40A-07 HSDL2-TEX10 13 15 chr9:112380180:+ chr9:100349372:- . NA TCGA-TS-A8AY-01A-21R-A40A-07 TEX10-HSDL2 4 40 chr9:100352772:- chr9:112403995:+ . NA TCGA-TS-A8AY-01A-21R-A40A-07 HIPK3-DPAGT1 2 20 chr11:33257889:+ chr11:119100408:- . NA TCGA-TS-A8AY-01A-21R-A40A-07 GLT1D1-CTNNA2 2 7 chr12:128853649:+ chr2:80544982:+ FRAMESHIFT NA TCGA-TS-A8AY-01A-21R-A40A-07 JAZF1-GTF2IRD1P1 1 8 chr7:27991909:- chr7:66839934:- . NA TCGA-TS-A8AY-01A-21R-A40A-07 TAF1B-SGCZ 2 3 chr2:9845318:+ chr8:14554926:- INFRAME NA TCGA-TS-A8AY-01A-21R-A40A-07 RPL7L1-HIPK3 2 2 chr6:42880966:+ chr11:33347293:+ FRAMESHIFT NA TCGA-TS-A8AY-01A-21R-A40A-07 UBR2-MED20 1 5 chr6:42679832:+ chr6:41909522:- FRAMESHIFT NA TCGA-UD-AAC4-01A-11R-A40A-07 EXOSC4-NEIL2 11 55 chr8:144078900:+ chr8:11779599:+ . NA TCGA-UD-AAC4-01A-11R-A40A-07 NASP-EDN2 4 18 chr1:45615400:+ chr1:41483275:- . NA TCGA-UD-AAC5-01A-11R-A40A-07 DIAPH3-PCDH9 1 3 chr13:59774189:- chr13:66903605:- FRAMESHIFT NA TCGA-UD-AAC6-01A-11R-A40A-07 CARMIL1-DCDC2 3 6 chr6:25540078:+ chr6:24353623:- FRAMESHIFT NA TCGA-UD-AAC7-01A-11R-A40A-07 SPAG7-KIF1C 2 4 chr17:4967720:- chr17:5006915:+ INFRAME NA TCGA-UT-A88C-01B-11R-A40A-07 PRKAG2-WASL 11 57 chr7:151595345:- chr7:123709223:- INFRAME NA TCGA-UT-A88C-01B-11R-A40A-07 EOGT-SYNPR 1 8 chr3:68998011:- chr3:63480832:+ INFRAME NA TCGA-UT-A88D-01B-11R-A40A-07 STK39-SCN7A 1 6 chr2:168012634:- chr2:166477710:- . NA TCGA-UT-A88E-01B-11R-A40A-07 AKT3-HEATR1 36 113 chr1:243637611:- chr1:236550990:- FRAMESHIFT Likely Oncogenic NA TCGA-UT-A88E-01B-11R-A40A-07 ALG9-PDGFD 29 73 chr11:111836165:- chr11:103947724:- INFRAME NA TCGA-UT-A88E-01B-11R-A40A-07 CACNA2D3-SCAF11 4 7 chr3:54570104:+ chr12:45964188:- INFRAME NA TCGA-UT-A97Y-01A-21R-A40A-07 KANK1-KCNV2 2 2 chr9:504754:+ chr9:2729446:+ . NA TCGA-XT-AASU-01A-11R-A40A-07 MICA-NCR3 52 717 chr6:31400763:+ chr6:31589899:- . NA TCGA-XT-AASU-01A-11R-A40A-07 HCP5-NCR3 52 600 chr6:31400763:+ chr6:31589899:- . NA TCGA-XT-AASU-01A-11R-A40A-07 KPNA1-NCK1 30 97 chr3:122496437:- chr3:136927984:+ . NA TCGA-XT-AASU-01A-11R-A40A-07 NPTXR-CHEK2 4 9 chr22:38843235:- chr22:28734727:- INFRAME NA TCGA-XT-AASU-01A-11R-A40A-07 ZNF197-OSBPL10 2 11 chr3:44586213:+ chr3:32046603:- . NA TCGA-XT-AASU-01A-11R-A40A-07 ZNF660-OSBPL10 2 11 chr3:44586213:+ chr3:32046603:- . NA TCGA-XT-AASU-01A-11R-A40A-07 FXYD5-FXYD3 1 13 chr19:35154809:+ chr19:35119363:+ . NA TCGA-XT-AASU-01A-11R-A40A-07 CCDC50-TBC1D5 1 7 chr3:191370036:+ chr3:17623913:- . NA TCGA-YS-A95B-01A-11R-A40A-07 SPATS2L-SGO2 4 5 chr2:200389283:+ chr2:200526136:+ . NA TCGA-YS-A95C-01A-11R-A40A-07 CTNNB1-DOCK3 2 11 chr3:41239354:+ chr3:50890026:+ . NA TCGA-YS-AA4M-01A-11R-A40A-07 NFAT5-NUP93 9 24 chr16:69566374:+ chr16:56798476:+ FRAMESHIFT NA TCGA-YS-AA4M-01A-11R-A40A-07 TUBB3-RSPRY1 3 43 chr16:89923458:+ chr16:57204504:+ . NA TCGA-YS-AA4M-01A-11R-A40A-07 ZNF319-KCTD19 3 13 chr16:57997607:- chr16:67303339:- . NA TCGA-YS-AA4M-01A-11R-A40A-07 PIEZO1-KCTD19 1 3 chr16:88725416:- chr16:67303337:- INFRAME NA TCGA-ZN-A9VO-01A-11R-A40A-07 SETD2-NISCH 1 13 chr3:47083720:- chr3:52470859:+ INFRAME Likely Oncogenic NA TCGA-ZN-A9VO-01A-11R-A40A-07 IMPDH1-GRM8 1 4 chr7:128403706:- chr7:126904683:- FRAMESHIFT NA TCGA-ZN-A9VO-01A-11R-A40A-07 NFATC3-PRMT7 1 4 chr16:68191775:+ chr16:68352248:+ FRAMESHIFT NA TCGA-ZN-A9VP-01A-11R-A40A-07 CDCA7L-PASD1 153 416 chr7:21916754:- chrX:151659713:+ INFRAME NA TCGA-ZN-A9VP-01A-11R-A40A-07 NCK2-NUP93 23 126 chr2:105855289:+ chr16:56748234:+ . NA TCGA-ZN-A9VP-01A-11R-A40A-07 HNRNPUL1-DAB1 8 17 chr19:41262582:+ chr1:57970865:- . NA TCGA-ZN-A9VP-01A-11R-A40A-07 EPB41-PRAMEF12 3 8 chr1:28887210:+ chr1:12774867:+ . NA TCGA-ZN-A9VP-01A-11R-A40A-07 GFER-TRAF7 2 7 chr16:1984476:+ chr16:2168077:+ FRAMESHIFT NA TCGA-ZN-A9VP-01A-11R-A40A-07 EPB41-C1orf158 1000 1000 chr1:28887208:+ chr1:12746456:+ . NA TCGA-ZN-A9VU-01A-11R-A40A-07 SFMBT1-ZDHHC3 4 34 chr3:53045816:- chr3:44959460:- . NA TCGA-ZN-A9VW-01A-11R-A40A-07 SETD2-SPATA12 29 121 chr3:47113876:- chr3:57073366:+ . Likely Oncogenic NA TCGA-04-1348-01A-01R-1565-13 LDLR-LRPAP1 156 35 chr19:11089615:+ chr4:3513036:- FRAMESHIFT NA TCGA-04-1348-01A-01R-1565-13 DEPDC5-OSBP2 79 20 chr22:31768863:+ chr22:30905837:+ INFRAME NA TCGA-04-1348-01A-01R-1565-13 LIFR-TTC33 52 12 chr5:38523419:- chr5:40613381:- FRAMESHIFT NA TCGA-04-1348-01A-01R-1565-13 FBLN2-LMCD1 45 11 chr3:13549208:+ chr3:8532737:+ . NA TCGA-04-1348-01A-01R-1565-13 RYBP-ARL13B 30 12 chr3:72446496:- chr3:93995874:+ FRAMESHIFT Likely Oncogenic NA TCGA-04-1348-01A-01R-1565-13 RAB11B-HAUS3 15 4 chr19:8402565:+ chr4:2239043:- FRAMESHIFT NA TCGA-04-1357-01A-01R-1565-13 TCF3-REXO1 60 12 chr19:1619111:- chr19:1815486:- . NA TCGA-04-1362-01A-01R-1565-13 RAB3IL1-NRG1 73 31 chr11:61899314:- chr8:32727949:+ INFRAME NA TCGA-04-1362-01A-01R-1565-13 EEA1-MPG 35 23 chr12:92891629:- chr16:79425:+ INFRAME NA TCGA-04-1362-01A-01R-1565-13 NCOR2-CABLES2 28 17 chr12:124354093:- chr20:62396592:- FRAMESHIFT NA TCGA-04-1362-01A-01R-1565-13 LAMA5-NCOR2 27 19 chr20:62351704:- chr12:124356806:- FRAMESHIFT NA TCGA-04-1362-01A-01R-1565-13 INPP5A-FRMD4A 16 12 chr10:132538171:+ chr10:14330183:- . NA TCGA-04-1362-01A-01R-1565-13 FRMD4A-TMEM45B 12 8 chr10:14330058:- chr11:129852475:+ . NA TCGA-09-0364-01A-02R-1564-13 CDR2L-HID1 85 35 chr17:74988122:+ chr17:74964632:- FRAMESHIFT NA TCGA-09-0364-01A-02R-1564-13 MCF2L-GRK1 5 12 chr13:112902371:+ chr13:113732884:+ FRAMESHIFT NA TCGA-09-0369-01A-01R-1564-13 ERI2-CRYM 29 31 chr16:20896308:- chr16:21244068:- . NA TCGA-09-0369-01A-01R-1564-13 PPP4R2-AHRR 25 2 chr3:72998158:+ chr5:422729:+ FRAMESHIFT NA TCGA-09-0369-01A-01R-1564-13 PTPRS-RGS6 21 4 chr19:5286050:- chr14:72352095:+ FRAMESHIFT NA TCGA-09-0369-01A-01R-1564-13 RNF138-VWC2 14 9 chr18:32092235:+ chr7:49802711:+ . NA TCGA-09-0369-01A-01R-1564-13 DCUN1D3-CRYM 11 14 chr16:20896308:- chr16:21244068:- . NA TCGA-09-0369-01A-01R-1564-13 CSNK2A1-SNRPB 2 1 chr20:543672:- chr20:2467758:- . NA TCGA-09-1670-01A-01R-1566-13 MUC16-SBNO2 17 0 chr19:8858204:- chr19:1127765:- FRAMESHIFT NA TCGA-09-1673-01A-01R-1566-13 PCCA-MBNL2 36 21 chr13:100209463:+ chr13:97334276:+ INFRAME NA TCGA-09-1673-01A-01R-1566-13 ATP2A2-CASC18 22 18 chr12:110282795:+ chr12:105737256:+ . NA TCGA-09-1673-01A-01R-1566-13 RSBN1L-RHBDD2 21 20 chr7:77697055:+ chr7:75881829:+ INFRAME NA TCGA-09-1673-01A-01R-1566-13 PARD3-ARHGAP24 21 11 chr10:34516979:- chr4:85570522:+ . NA TCGA-09-1673-01A-01R-1566-13 RALBP1-RAB31 18 23 chr18:9475691:+ chr18:9775278:+ . NA TCGA-09-1673-01A-01R-1566-13 CHD6-NCOA5 22 5 chr20:41618340:- chr20:46062889:- . NA TCGA-09-1673-01A-01R-1566-13 CORO1C-ATXN2 19 12 chr12:108701124:- chr12:111488780:- INFRAME NA TCGA-09-1673-01A-01R-1566-13 KCTD21-NARS2 20 5 chr11:78188573:- chr11:78443758:- . NA TCGA-09-1673-01A-01R-1566-13 ZNF512-KCNK3 17 11 chr2:27617571:+ chr2:26727667:+ FRAMESHIFT NA TCGA-09-1673-01A-01R-1566-13 SPECC1L-TMEM62 14 16 chr22:24347176:+ chr15:43169593:+ FRAMESHIFT NA TCGA-09-1673-01A-01R-1566-13 CDK12-SMG6 12 16 chr17:39501439:+ chr17:2081956:- FRAMESHIFT Likely Oncogenic NA TCGA-09-1673-01A-01R-1566-13 UHRF1BP1-HCG22 12 14 chr6:34792294:+ chr6:31055710:+ . NA TCGA-09-1673-01A-01R-1566-13 ADD2-ANTXR1 13 6 chr2:70767886:- chr2:69102842:+ FRAMESHIFT NA TCGA-09-1673-01A-01R-1566-13 KLHL14-CCDC178 9 12 chr18:32680169:- chr18:32974681:- FRAMESHIFT NA TCGA-09-1673-01A-01R-1566-13 FARP1-IPO5 7 18 chr13:98368195:+ chr13:97969723:+ INFRAME NA TCGA-09-1673-01A-01R-1566-13 ECE1-SRSF10 8 9 chr1:21247221:- chr1:23978817:- INFRAME NA TCGA-09-1673-01A-01R-1566-13 HDAC1-PTPRU 7 6 chr1:32302733:+ chr1:29255275:+ FRAMESHIFT NA TCGA-09-1674-01A-01R-1566-13 ZNF428-ETHE1 51 7 chr19:43619558:- chr19:43511566:- . NA TCGA-09-1674-01A-01R-1566-13 PHACTR4-SCMH1 32 8 chr1:28369825:+ chr1:41075451:- . NA TCGA-09-1674-01A-01R-1566-13 ZNF420-SIPA1L3 14 2 chr19:37091121:+ chr19:38099962:+ FRAMESHIFT NA TCGA-09-1674-01A-01R-1566-13 CCT7-ALMS1 13 2 chr2:73234384:+ chr2:73489634:+ INFRAME NA TCGA-09-2044-01B-01R-1568-13 SPICE1-MORC1 65 13 chr3:113488945:- chr3:108971402:- INFRAME NA TCGA-09-2044-01B-01R-1568-13 KPNA6-TMEM39B 50 8 chr1:32108134:+ chr1:32074951:+ INFRAME NA TCGA-09-2044-01B-01R-1568-13 WNK1-EIF3G 20 11 chr12:830160:+ chr19:10119700:- FRAMESHIFT NA TCGA-09-2044-01B-01R-1568-13 SUMO3-FAM83E 20 3 chr21:44813976:- chr19:48603911:- FRAMESHIFT NA TCGA-09-2044-01B-01R-1568-13 THOC5-ASCC2 16 0 chr22:29543429:- chr22:29816073:- INFRAME NA TCGA-09-2044-01B-01R-1568-13 E2F6-STK36 10 7 chr2:11465772:- chr2:218680603:+ FRAMESHIFT NA TCGA-09-2051-01A-01R-1568-13 XPOT-C12orf56 66 10 chr12:64410095:+ chr12:64353056:- INFRAME NA TCGA-09-2051-01A-01R-1568-13 SPIDR-TGFB1 61 7 chr8:47294030:+ chr19:41332281:- FRAMESHIFT NA TCGA-09-2051-01A-01R-1568-13 CCDC85A-EYA2 20 0 chr2:56342955:+ chr20:47143059:+ INFRAME NA TCGA-09-2051-01A-01R-1568-13 DTX4-MS4A1 13 3 chr11:59182462:+ chr11:60462359:+ . NA TCGA-10-0928-01A-02R-1564-13 SPOP-SLC35B1 70 24 chr17:49677933:- chr17:49706334:- . Likely Oncogenic NA TCGA-10-0928-01A-02R-1564-13 PAX8-ZNF512 58 10 chr2:113278370:- chr2:27598067:+ FRAMESHIFT NA TCGA-10-0928-01A-02R-1564-13 PTPRJ-TAF3 14 5 chr11:48156119:+ chr10:7963920:+ FRAMESHIFT NA TCGA-10-0928-01A-02R-1564-13 LSM2-HSPA1L 12 8 chr6:31806075:- chr6:31811985:- . NA TCGA-10-0928-01A-02R-1564-13 MYRIP-S100A2 8 4 chr3:40044271:+ chr1:153563887:- . NA TCGA-10-0928-01A-02R-1564-13 SUCLA2-CTTNBP2NL 8 3 chr13:48001180:- chr1:112448942:+ INFRAME NA TCGA-10-0928-01A-02R-1564-13 CTTNBP2NL-SUCLA2 6 1 chr1:112416264:+ chr13:47997023:- INFRAME NA TCGA-13-0800-01A-01R-1564-13 FKBP8-DAND5 87 36 chr19:18543485:- chr19:12973390:+ . NA TCGA-13-0800-01A-01R-1564-13 ZNF227-PDCD5 44 0 chr19:44212585:+ chr19:32582195:+ . NA TCGA-13-0800-01A-01R-1564-13 TNPO2-ASNA1 31 19 chr19:12723249:- chr19:12747197:+ . NA TCGA-13-0800-01A-01R-1564-13 AK9-PDSS2 24 4 chr6:109690472:- chr6:107274227:- . NA TCGA-13-0890-01A-01R-1564-13 FOXJ3-SVBP 114 21 chr1:42335059:- chr1:42816580:- . NA TCGA-13-0890-01A-01R-1564-13 TMEM201-RBP7 12 6 chr1:9597053:+ chr1:10015782:+ INFRAME NA TCGA-13-0890-01A-01R-1564-13 CDK13-POU6F2 2 6 chr7:39951852:+ chr7:39433077:+ FRAMESHIFT NA TCGA-13-0893-01B-01R-1565-13 CDC20B-DHX29 86 40 chr5:55172588:- chr5:55256540:- FRAMESHIFT NA TCGA-13-0893-01B-01R-1565-13 TRAPPC10-GRID1 58 6 chr21:44012560:+ chr10:85869180:- FRAMESHIFT NA TCGA-13-0893-01B-01R-1565-13 PXK-RPP14 39 11 chr3:58333090:+ chr3:58310309:+ . NA TCGA-13-0893-01B-01R-1565-13 TTC39C-CABLES1 26 4 chr18:24015038:+ chr18:23257227:+ FRAMESHIFT NA TCGA-13-0893-01B-01R-1565-13 KMT2D-LMBR1L 24 5 chr12:49045920:- chr12:49107045:- FRAMESHIFT Likely Oncogenic NA TCGA-13-0893-01B-01R-1565-13 MOB3C-ATPAF1 15 11 chr1:46616711:- chr1:46665364:- . NA TCGA-13-0893-01B-01R-1565-13 SCAPER-LINGO1 15 7 chr15:76883812:- chr15:77615900:- INFRAME NA TCGA-13-0893-01B-01R-1565-13 UIMC1-LILRB1 15 4 chr5:176982469:- chr19:54631026:+ INFRAME NA TCGA-13-0893-01B-01R-1565-13 PSMB3-CISD3 12 4 chr17:38762505:+ chr17:38731320:+ FRAMESHIFT NA TCGA-13-0893-01B-01R-1565-13 ATF7IP2-IQCK 7 5 chr16:10440462:+ chr16:19763848:+ INFRAME NA TCGA-13-0893-01B-01R-1565-13 WASF2-FGR 2 1 chr1:27489986:- chr1:27625151:- . NA TCGA-13-0893-01B-01R-1565-13 BAZ1B-BCL7B 1 2 chr7:73459536:- chr7:73552242:- FRAMESHIFT NA TCGA-13-0897-01A-01R-1564-13 QKI-MRPL14 29 4 chr6:163478896:+ chr6:44116629:- . NA TCGA-13-0897-01A-01R-1564-13 AMPD2-STXBP3 10 2 chr1:109620278:+ chr1:108796234:+ FRAMESHIFT NA TCGA-13-0913-01A-01R-1564-13 KPNA6-C6orf48 62 18 chr1:32108134:+ chr6:31835411:+ . NA TCGA-13-0913-01A-01R-1564-13 PLEKHA3-OSBPL6 57 26 chr2:178480909:+ chr2:178372126:+ FRAMESHIFT NA TCGA-13-0913-01A-01R-1564-13 RABL6-TMEM141 38 23 chr9:136808326:+ chr9:136792251:+ INFRAME NA TCGA-13-0920-01A-01R-1564-13 TBL1XR1-DHX30 6 12 chr3:177197121:- chr3:47805326:+ . NA TCGA-13-0920-01A-01R-1564-13 DTD1-TTC29 7 2 chr20:18628233:+ chr4:146707551:- FRAMESHIFT NA TCGA-13-0920-01A-01R-1564-13 VPS37C-AHNAK 4 2 chr11:61161391:- chr11:62491831:- . NA TCGA-13-0920-01A-01R-1564-13 KIF15-BCL2L1 1 6 chr3:44761884:+ chr20:31666086:- FRAMESHIFT NA TCGA-13-1403-01A-01R-1565-13 DDX10-ATM 20 14 chr11:108852209:+ chr11:108365082:+ INFRAME Likely Oncogenic NA TCGA-13-1403-01A-01R-1565-13 PPP1R37-IGSF23 12 7 chr19:45093527:+ chr19:44623703:+ INFRAME NA TCGA-13-1403-01A-01R-1565-13 KIAA0100-FAM222B 8 4 chr17:28631479:- chr17:28766707:- . NA TCGA-13-1403-01A-01R-1565-13 LYAR-CORO1B 5 13 chr4:4290036:- chr11:67441514:- . NA TCGA-13-1403-01A-01R-1565-13 BAZ2B-PLA2R1 5 5 chr2:159428311:- chr2:159969359:- FRAMESHIFT NA TCGA-13-1405-01A-01R-1565-13 ZNF317-AP3D1 270 34 chr19:9140592:+ chr19:2115613:- . NA TCGA-13-1405-01A-01R-1565-13 GATAD2B-CRTC2 130 67 chr1:153922733:- chr1:153949384:- . NA TCGA-13-1405-01A-01R-1565-13 ETHE1-UPK3A 109 54 chr19:43526515:- chr22:45295560:+ FRAMESHIFT NA TCGA-13-1405-01A-01R-1565-13 FCHSD2-CHRM1 77 35 chr11:73140031:- chr11:62911178:- . NA TCGA-13-1405-01A-01R-1565-13 RALY-TMEM248 62 18 chr20:33994131:+ chr7:66941848:+ . NA TCGA-13-1405-01A-01R-1565-13 TMEM248-RALY 60 17 chr7:66921461:+ chr20:34031522:+ . NA TCGA-13-1405-01A-01R-1565-13 MUC16-THADA 51 46 chr19:8953894:- chr2:43505735:- FRAMESHIFT NA TCGA-13-1405-01A-01R-1565-13 RAB3IL1-AHNAK 42 28 chr11:61902442:- chr11:62436483:- . NA TCGA-13-1405-01A-01R-1565-13 POU2F1-MAEL 31 3 chr1:167220958:+ chr1:166991378:+ FRAMESHIFT NA TCGA-13-1405-01A-01R-1565-13 EPB41L1-HTR3C 11 36 chr20:36112480:+ chr3:184055312:+ . NA TCGA-13-1405-01A-01R-1565-13 TSHZ2-PIGU 16 8 chr20:53256444:+ chr20:34657244:- INFRAME NA TCGA-13-1405-01A-01R-1565-13 RNF115-HFE2 14 1 chr1:145784539:- chr1:146036745:- . NA TCGA-13-1405-01A-01R-1565-13 IFITM10-CFL1 12 4 chr11:1747667:- chr11:65826609:- . NA TCGA-13-1405-01A-01R-1565-13 AKAP13-NOX5 12 1 chr15:85380798:+ chr15:69026528:+ . NA TCGA-13-1405-01A-01R-1565-13 DNAJC17-INO80 10 2 chr15:40773727:- chr15:41005687:- INFRAME NA TCGA-13-1405-01A-01R-1565-13 TAB1-SMG9 9 3 chr22:39421971:+ chr19:43750747:- . NA TCGA-13-1405-01A-01R-1565-13 PPP1R15B-PIK3C2B 8 6 chr1:204409492:- chr1:204469886:- . NA TCGA-13-1405-01A-01R-1565-13 USP33-FUBP1 7 8 chr1:77759643:- chr1:77970015:- . Likely Oncogenic NA TCGA-13-1481-01A-01R-1565-13 FUS-KAT8 22 22 chr16:31180227:+ chr16:31127035:+ FRAMESHIFT NA TCGA-13-1481-01A-01R-1565-13 C6orf223-SCAND1 18 17 chr6:44000700:+ chr20:35954691:- . NA TCGA-13-1481-01A-01R-1565-13 SAE1-GRAP2 15 5 chr19:47131028:+ chr22:39955819:+ FRAMESHIFT NA TCGA-13-1481-01A-01R-1565-13 FAM198B-IGKJ1 14 0 chr4:158125635:- chr2:88861919:- . NA TCGA-13-1481-01A-01R-1565-13 SCRIB-EEF1D 8 14 chr8:143808609:- chr8:143590081:- INFRAME NA TCGA-13-1489-01A-01R-1565-13 SF1-CST6 89 52 chr11:64778362:- chr11:66012186:+ FRAMESHIFT NA TCGA-13-1489-01A-01R-1565-13 HEATR6-WFDC21P 26 3 chr17:60076130:- chr17:60088301:- . NA TCGA-13-1497-01A-01R-1565-13 LONRF1-TRDC 22 9 chr8:12740874:- chr14:22462932:+ FRAMESHIFT NA TCGA-13-1497-01A-01R-1565-13 PARD3-MTA1 17 12 chr10:34696318:- chr14:105463493:+ INFRAME NA TCGA-13-1497-01A-01R-1565-13 RAB33B-SEC24D 15 6 chr4:139454444:+ chr4:118745060:- INFRAME NA TCGA-13-1497-01A-01R-1565-13 DUXAP9-ST7L 12 3 chr14:19062466:+ chr1:112526111:- . NA TCGA-13-1497-01A-01R-1565-13 DCAF6-LETM1 11 4 chr1:167937008:+ chr4:1849209:- INFRAME NA TCGA-13-1497-01A-01R-1565-13 HNRNPC-ZBTB7C 9 12 chr14:21269298:- chr18:48185995:- . NA TCGA-13-1497-01A-01R-1565-13 SP3-NDUFB3 7 12 chr2:173954873:- chr2:201078881:+ . NA TCGA-13-1497-01A-01R-1565-13 FAF2-METTL2A 6 12 chr5:176448470:+ chr17:62444837:+ FRAMESHIFT NA TCGA-13-1497-01A-01R-1565-13 PRKAG2-NUB1 7 7 chr7:151632069:- chr7:151345348:+ INFRAME NA TCGA-13-1497-01A-01R-1565-13 SYNCRIP-SEMA3A 5 11 chr6:85636967:- chr7:84110589:- INFRAME NA TCGA-13-1497-01A-01R-1565-13 SUCO-DNM3 4 6 chr1:172570730:+ chr1:172379018:+ FRAMESHIFT NA TCGA-13-1498-01A-01R-1565-13 MGRN1-C16orf96 10 2 chr16:4652824:+ chr16:4593224:+ INFRAME NA TCGA-13-1498-01A-01R-1565-13 MGAT4B-MRNIP 8 9 chr5:179806487:- chr5:179835336:- . NA TCGA-13-1498-01A-01R-1565-13 GATAD2B-IGSF8 9 3 chr1:153922733:- chr1:160095246:- . NA TCGA-13-1505-01A-01R-1565-13 MYO9B-TECR 13 16 chr19:17075874:+ chr19:14562525:+ . NA TCGA-13-1505-01A-01R-1565-13 PEX6-PPP2R5D 9 5 chr6:42978269:- chr6:42989611:+ INFRAME NA TCGA-13-1505-01A-01R-1565-13 CCND3-PPP2R5D 9 4 chr6:42048501:- chr6:42989611:+ . NA TCGA-13-1505-01A-01R-1565-13 ADGRF1-TRERF1 7 6 chr6:47025854:- chr6:42236411:- INFRAME NA TCGA-13-1505-01A-01R-1565-13 TGFBRAP1-CNOT9 7 1 chr2:105296356:- chr2:218582971:+ INFRAME NA TCGA-13-1505-01A-01R-1565-13 NUP107-MDM2 5 3 chr12:68690746:+ chr12:68848676:+ . NA TCGA-13-1506-01A-01R-1565-13 TPM3-FAM193A 89 20 chr1:154182988:- chr4:2731775:+ FRAMESHIFT NA TCGA-13-1506-01A-01R-1565-13 PAIP1-DAB2 76 22 chr5:43555830:- chr5:39375084:- INFRAME NA TCGA-13-1506-01A-01R-1565-13 FLOT2-MYO18A 28 8 chr17:28897526:- chr17:29095059:- FRAMESHIFT NA TCGA-13-1506-01A-01R-1565-13 IFIT1-LIPA 14 51 chr10:89392717:+ chr10:89247649:- . NA TCGA-13-1506-01A-01R-1565-13 TRIM2-ARFIP1 19 10 chr4:153204560:+ chr4:152910064:+ INFRAME NA TCGA-13-1506-01A-01R-1565-13 CAPZB-TMCO4 16 9 chr1:19485436:- chr1:19683444:- INFRAME NA TCGA-13-1506-01A-01R-1565-13 CSNK1A1-PDE6A 13 6 chr5:149520290:- chr5:149863266:- INFRAME NA TCGA-13-1506-01A-01R-1565-13 ECE1-SLC48A1 13 5 chr1:21290070:- chr12:47772170:+ . NA TCGA-13-1507-01A-01R-1565-13 USP54-PCDH15 30 15 chr10:73571421:- chr10:55166651:- . NA TCGA-13-1507-01A-01R-1565-13 RNF144A-HDLBP 7 2 chr2:6917622:+ chr2:241268541:- . NA TCGA-13-1511-01A-01R-1565-13 SAC3D1-SNX15 184 46 chr11:65041866:+ chr11:65039686:+ INFRAME NA TCGA-13-1511-01A-01R-1565-13 MRPS18C-ENOPH1 75 22 chr4:83456958:+ chr4:82447920:+ INFRAME NA TCGA-13-1511-01A-01R-1565-13 LTBP1-BRE 51 9 chr2:32948945:+ chr2:28129271:+ FRAMESHIFT NA TCGA-13-1511-01A-01R-1565-13 TLN2-FOXB1 40 16 chr15:62657898:+ chr15:60036110:+ . NA TCGA-13-1511-01A-01R-1565-13 VPS26A-LRRTM3 22 13 chr10:69124280:+ chr10:67097587:+ INFRAME NA TCGA-13-1511-01A-01R-1565-13 PTPN9-SCAPER 22 4 chr15:75578714:- chr15:76434310:- INFRAME NA TCGA-13-1511-01A-01R-1565-13 USP6NL-FRMD4A 21 6 chr10:11597631:- chr10:13858912:- FRAMESHIFT NA TCGA-13-1511-01A-01R-1565-13 KRAS-LMNTD1 19 13 chr12:25245274:- chr12:25503800:- FRAMESHIFT NA TCGA-13-1511-01A-01R-1565-13 LUC7L-AXIN1 18 5 chr16:199062:- chr16:314683:- FRAMESHIFT Likely Oncogenic NA TCGA-13-1511-01A-01R-1565-13 TSPAN4-VPREB3 15 7 chr11:850367:+ chr22:23753198:- FRAMESHIFT NA TCGA-13-1511-01A-01R-1565-13 SLC26A2-ARHGEF37 15 3 chr5:149960979:+ chr5:149624012:+ . NA TCGA-13-1511-01A-01R-1565-13 HACD3-ANKDD1A 10 3 chr15:65530718:+ chr15:64930822:+ INFRAME NA TCGA-13-1511-01A-01R-1565-13 SGPL1-ADAMTS14 8 6 chr10:70816880:+ chr10:70757962:+ INFRAME NA TCGA-13-1512-01A-01R-1565-13 ARID4B-GNPAT 46 9 chr1:235326914:- chr1:231262723:+ INFRAME NA TCGA-13-1512-01A-01R-1565-13 MAN1A2-CD101 22 10 chr1:117502970:+ chr1:117033860:+ FRAMESHIFT NA TCGA-13-1512-01A-01R-1565-13 STK3-PAQR3 22 3 chr8:98526742:- chr4:78906161:- . NA TCGA-13-1512-01A-01R-1565-13 CACNA2D3-SRP68 3 7 chr3:54123594:+ chr17:76067330:- INFRAME NA TCGA-13-2060-01A-01R-1568-13 SLC38A1-HDAC7 23 2 chr12:46206080:- chr12:47802274:- INFRAME NA TCGA-13-A5FT-01A-11R-A406-31 MED16-POLR2E 192 137 chr19:879937:- chr19:1089551:- INFRAME NA TCGA-13-A5FT-01A-11R-A406-31 NCOR2-PIP4K2B 79 23 chr12:124567308:- chr17:38786920:- . NA TCGA-13-A5FT-01A-11R-A406-31 PRPF31-CACNG7 67 33 chr19:54118633:+ chr19:53942036:+ FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 CCT3-ARHGEF11 46 13 chr1:156334713:- chr1:156961775:- INFRAME NA TCGA-13-A5FT-01A-11R-A406-31 CRK-SLC43A2 36 23 chr17:1455877:- chr17:1593279:- FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 PDXDC2P-NOB1 28 15 chr16:70065756:- chr16:69754726:- . NA TCGA-13-A5FT-01A-11R-A406-31 UVRAG-SERPINH1 29 9 chr11:75912039:+ chr11:75566316:+ . NA TCGA-13-A5FT-01A-11R-A406-31 PPP1R37-NECTIN2 24 6 chr19:45147635:+ chr19:44873916:+ . NA TCGA-13-A5FT-01A-11R-A406-31 SP1-C12orf10 16 7 chr12:53411435:+ chr12:53305908:+ . NA TCGA-13-A5FT-01A-11R-A406-31 GRK6-ZNF346 14 8 chr5:177436530:+ chr5:177044389:+ INFRAME NA TCGA-13-A5FT-01A-11R-A406-31 XRCC6-L3MBTL2 14 7 chr22:41658352:+ chr22:41225794:+ FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 LRP4-CELF1 12 6 chr11:46883871:- chr11:47489024:- INFRAME NA TCGA-13-A5FT-01A-11R-A406-31 DSTYK-INTS3 10 5 chr1:205211271:- chr1:153757572:+ FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 EZH1-MAP3K14 10 4 chr17:42709849:- chr17:45290768:- . NA TCGA-13-A5FT-01A-11R-A406-31 EDC3-CYP11A1 9 4 chr15:74655733:- chr15:74348055:- FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 CTPS1-NFYC 8 7 chr1:40991845:+ chr1:40738836:+ . NA TCGA-13-A5FT-01A-11R-A406-31 RNF123-ARIH2 9 3 chr3:49706898:+ chr3:48973699:+ FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 DHX35-VSTM2L 8 4 chr20:39002868:+ chr20:37931635:+ FRAMESHIFT NA TCGA-13-A5FT-01A-11R-A406-31 EML4-HNRNPA1P57 7 5 chr2:42169636:+ chr2:41156597:+ . NA TCGA-20-1682-01A-01R-1564-13 ALDH7A1-PIP 29 16 chr5:126575420:- chr7:143135194:+ INFRAME NA TCGA-20-1682-01A-01R-1564-13 SIPA1L3-NF1P3 7 2 chr19:38088851:+ chr21:14000927:+ . NA TCGA-20-1682-01A-01R-1564-13 TBC1D8B-RNF128 5 7 chrX:106802805:+ chrX:106791066:+ . NA TCGA-20-1682-01A-01R-1564-13 TMEM135-ELOVL1 4 3 chr11:87236684:+ chr1:43365623:- . NA TCGA-20-1683-01A-01R-1566-13 IGKV2D-18-IGKJ5 366 0 chr2:90053363:+ chr2:88860599:- . NA TCGA-20-1683-01A-01R-1566-13 WTIP-SCGB2B2 25 20 chr19:34495771:+ chr19:34632640:- . NA TCGA-20-1683-01A-01R-1566-13 FCGRT-PRMT1 25 11 chr19:49514486:+ chr19:49680487:+ FRAMESHIFT NA TCGA-20-1683-01A-01R-1566-13 UBE3C-DNAJB6 18 4 chr7:157139338:+ chr7:157358547:+ . NA TCGA-20-1683-01A-01R-1566-13 SLX4IP-CEP89 14 3 chr20:10458231:+ chr19:32887841:- INFRAME NA TCGA-20-1683-01A-01R-1566-13 CREBBP-ZNF597 13 6 chr16:3850297:- chr16:3443206:- . Likely Oncogenic NA TCGA-20-1683-01A-01R-1566-13 BAG4-ZNF672 10 6 chr8:38192795:+ chr1:248844483:+ . NA TCGA-20-1683-01A-01R-1566-13 ATF6-SDHC 9 5 chr1:161853323:+ chr1:161362329:+ INFRAME NA TCGA-20-1684-01A-01R-1566-13 ITCH-CBFA2T2 75 38 chr20:34393881:+ chr20:33644347:+ FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 UBE2G1-PELP1 60 42 chr17:4366271:- chr17:4676812:- FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 ERGIC1-KCNIP1 52 62 chr5:172834433:+ chr5:170718758:+ FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 GLG1-CFDP1 46 22 chr16:74467756:- chr16:75305182:- FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 C9orf3-MFSD14B 27 21 chr9:95082719:+ chr9:94429189:+ . NA TCGA-20-1684-01A-01R-1566-13 CACNA2D3-DAP3 29 13 chr3:54642241:+ chr1:155738157:+ INFRAME NA TCGA-20-1684-01A-01R-1566-13 RSF1-KCTD21 28 12 chr11:77820528:- chr11:78174583:- . NA TCGA-20-1684-01A-01R-1566-13 ZNF276-JPH3 22 14 chr16:89723709:+ chr16:87696580:+ INFRAME NA TCGA-20-1684-01A-01R-1566-13 PSMF1-ABRA 17 9 chr20:1118902:+ chr8:106761514:- FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 PTPRK-TARID 13 16 chr6:128322039:- chr6:133845951:- . NA TCGA-20-1684-01A-01R-1566-13 JMJD1C-CTNNA3 15 5 chr10:63380318:- chr10:66775524:- INFRAME NA TCGA-20-1684-01A-01R-1566-13 DYNC2H1-YAP1 12 10 chr11:103283085:+ chr11:102162456:+ FRAMESHIFT Likely Oncogenic NA TCGA-20-1684-01A-01R-1566-13 FOXJ3-LRRC41 13 5 chr1:42227883:- chr1:46298370:- FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 CHIC2-SPINK2 9 12 chr4:54048955:- chr4:56820579:- FRAMESHIFT NA TCGA-20-1684-01A-01R-1566-13 NRG4-LINGO1 10 7 chr15:76009200:- chr15:77796053:- . NA TCGA-20-1684-01A-01R-1566-13 ATG4C-NFIA 10 6 chr1:62805255:+ chr1:61332512:+ INFRAME NA TCGA-20-1685-01A-01R-1566-13 HSP90B1-TEX261 113 6 chr12:103930564:+ chr2:70991983:- FRAMESHIFT NA TCGA-20-1685-01A-01R-1566-13 CDK2AP1-KCNQ1 35 8 chr12:123271564:- chr11:2768844:+ FRAMESHIFT NA TCGA-20-1685-01A-01R-1566-13 PML-AGBL3 34 4 chr15:73994941:+ chr7:135134841:+ FRAMESHIFT NA TCGA-20-1685-01A-01R-1566-13 MID1-SPAG17 21 4 chrX:10482480:- chr1:118055914:- INFRAME NA TCGA-20-1687-01A-01R-1566-13 SKAP1-NQO2 29 11 chr17:48345905:- chr6:2993931:+ . NA TCGA-20-1687-01A-01R-1566-13 TTYH2-APOO 21 2 chr17:74230999:+ chrX:23840377:- INFRAME NA TCGA-20-1687-01A-01R-1566-13 C19orf43-ASNA1 8 1 chr19:12734313:- chr19:12745377:+ INFRAME NA TCGA-23-1111-01A-01R-1567-13 PCBP2-TNFRSF1A 36 15 chr12:53465973:+ chr12:6334244:- INFRAME NA TCGA-23-1111-01A-01R-1567-13 PSMD3-ZPBP2 26 0 chr17:39986712:+ chr17:39870694:+ INFRAME NA TCGA-23-1111-01A-01R-1567-13 POC1A-TNNC1 24 2 chr3:52122379:- chr3:52452513:- INFRAME NA TCGA-23-1111-01A-01R-1567-13 SPECC1L-MKL1 21 6 chr22:24347176:+ chr22:40424381:- INFRAME NA TCGA-23-1114-01B-01R-1566-13 INTS6-DCBLD2 66 11 chr13:51451025:- chr3:98881767:- FRAMESHIFT NA TCGA-23-1114-01B-01R-1566-13 ORC2-CPEB1 13 0 chr2:200963490:- chr15:82571532:- . NA TCGA-23-1114-01B-01R-1566-13 RYBP-ROBO2 8 7 chr3:72446496:- chr3:77477414:+ INFRAME Likely Oncogenic NA TCGA-23-1122-01A-01R-1565-13 LGR6-RNPEP 42 19 chr1:202194201:+ chr1:201996147:+ INFRAME NA TCGA-23-1122-01A-01R-1565-13 PTPN14-ANKRD44 40 15 chr1:214364512:- chr2:196967446:- FRAMESHIFT NA TCGA-23-1122-01A-01R-1565-13 UTRN-TBC1D31 32 18 chr6:144840832:+ chr8:123150036:+ INFRAME NA TCGA-23-1122-01A-01R-1565-13 TMEM94-TTYH2 21 21 chr17:75456751:+ chr17:74230888:+ . NA TCGA-23-1122-01A-01R-1565-13 IKBIP-NR2C1 12 4 chr12:98634296:- chr12:95051943:- INFRAME NA TCGA-23-1122-01A-01R-1565-13 KDM3A-SUCLG2 9 7 chr2:86442233:+ chr3:67609596:- INFRAME NA TCGA-23-1122-01A-01R-1565-13 NSD1-PCDHB15 7 12 chr5:177239865:+ chr5:141245483:+ . Likely Oncogenic NA TCGA-23-1123-01A-01R-1565-13 LSM7-GNG7 113 135 chr19:2328387:- chr19:2520725:- . NA TCGA-23-1123-01A-01R-1565-13 SRGAP3-RAD18 45 12 chr3:9248885:- chr3:8941804:- FRAMESHIFT NA TCGA-23-1123-01A-01R-1565-13 PANK2-HSPA12B 34 17 chr20:3889728:+ chr20:3738658:+ . NA TCGA-23-1123-01A-01R-1565-13 NSD2-YIPF7 21 16 chr4:1961151:+ chr4:44650101:- FRAMESHIFT NA TCGA-23-1123-01A-01R-1565-13 SLC25A42-SUGP2 11 9 chr19:19064115:+ chr19:19008428:- . NA TCGA-23-1123-01A-01R-1565-13 NPLOC4-FASN 10 6 chr17:81597245:- chr17:82084953:- FRAMESHIFT NA TCGA-23-1809-01A-01R-1566-13 TANC1-PTP4A1P1 9 8 chr2:159227965:+ chr2:158065863:+ . NA TCGA-23-2077-01A-01R-1568-13 MTCH2-FHIT 422 80 chr11:47638699:- chr3:59752321:- INFRAME NA TCGA-23-2077-01A-01R-1568-13 USP9X-DDX3X 98 9 chrX:41086109:+ chrX:41364274:+ . NA TCGA-23-2077-01A-01R-1568-13 FAM160A2-APBB1 37 34 chr11:6234544:- chr11:6411361:- . NA TCGA-23-2077-01A-01R-1568-13 E2F3-WRNIP1 20 2 chr6:20403832:+ chr6:2779263:+ FRAMESHIFT NA TCGA-23-2077-01A-01R-1568-13 NR2F6-ABHD8 14 6 chr19:17244943:- chr19:17301624:- FRAMESHIFT NA TCGA-23-2077-01A-01R-1568-13 ANO2-DCP1B 9 0 chr12:5827769:- chr12:1967910:- INFRAME NA TCGA-23-2077-01A-01R-1568-13 ROCK2-BTNL2 9 0 chr2:11211681:- chr6:32401805:- INFRAME NA TCGA-23-2077-01A-01R-1568-13 GNG12-CYP4X1 7 2 chr1:67777458:- chr1:47029990:+ . NA TCGA-23-2081-01A-01R-1568-13 ATP5C1-TAF3 64 9 chr10:7788263:+ chr10:7963920:+ FRAMESHIFT NA TCGA-23-2084-01A-02R-1568-13 SPTAN1-SLC34A3 80 44 chr9:128627044:+ chr9:137236346:+ . NA TCGA-23-2084-01A-02R-1568-13 JADE1-C4orf33 16 7 chr4:128852268:+ chr4:129102602:+ . NA TCGA-23-2084-01A-02R-1568-13 CBFB-GSE1 16 3 chr16:67082308:+ chr16:85171589:+ INFRAME NA TCGA-23-2084-01A-02R-1568-13 DIXDC1-ARCN1 14 4 chr11:111937559:+ chr11:118592709:+ INFRAME NA TCGA-24-1103-01A-01R-1565-13 ZMYM4-AP2S1 44 14 chr1:35399576:+ chr19:46846142:- INFRAME NA TCGA-24-1103-01A-01R-1565-13 HRH1-SLC6A11 29 0 chr3:11154554:+ chr3:10912090:+ . NA TCGA-24-1103-01A-01R-1565-13 ARSG-AP2B1 13 2 chr17:68370524:+ chr17:35717195:+ INFRAME NA TCGA-24-1416-01A-01R-1565-13 RAB34-NUFIP2 10 3 chr17:28717213:- chr17:29267530:- INFRAME NA TCGA-24-1417-01A-01R-1565-13 CCDC148-GCG 16 9 chr2:158456415:- chr2:162149187:- . NA TCGA-24-1417-01A-01R-1565-13 KLHDC10-SND1 16 4 chr7:130129576:+ chr7:127807484:+ INFRAME NA TCGA-24-1417-01A-01R-1565-13 ZNF578-SIGLEC20P 10 24 chr19:52456958:+ chr19:51184963:+ . NA TCGA-24-1417-01A-01R-1565-13 NAP1L4-CFTR 8 10 chr11:2951259:- chr7:117587739:+ INFRAME NA TCGA-24-1417-01A-01R-1565-13 MFSD6-PMS1 5 5 chr2:190469855:+ chr2:189873496:+ INFRAME NA TCGA-24-1417-01A-01R-1565-13 SRGAP3-ATP2B2 5 5 chr3:9248885:- chr3:10534133:- . NA TCGA-24-1418-01A-01R-1565-13 WWC1-RARS 7 4 chr5:168292271:+ chr5:168500591:+ FRAMESHIFT NA TCGA-24-1423-01A-01R-1565-13 AAK1-C2orf42 335 134 chr2:69556860:- chr2:70150564:- FRAMESHIFT NA TCGA-24-1423-01A-01R-1565-13 MICU1-TSPAN15 24 10 chr10:72475100:- chr10:69483691:+ INFRAME NA TCGA-24-1423-01A-01R-1565-13 AMFR-BBS2 11 7 chr16:56401733:- chr16:56484867:- INFRAME NA TCGA-24-1424-01A-01R-1565-13 NUPL2-EPCAM 52 50 chr7:23182206:+ chr2:47377014:+ FRAMESHIFT NA TCGA-24-1424-01A-01R-1565-13 DNAH17-NCAN 37 32 chr17:78507278:- chr19:19216947:+ . NA TCGA-24-1424-01A-01R-1565-13 HELZ-RBFOX3 38 8 chr17:67215899:- chr17:79482598:- . NA TCGA-24-1424-01A-01R-1565-13 GPATCH8-MYO1D 35 18 chr17:44503326:- chr17:32494915:- FRAMESHIFT NA TCGA-24-1424-01A-01R-1565-13 AGRN-NDUFS5 35 16 chr1:1035324:+ chr1:39028723:+ . NA TCGA-24-1424-01A-01R-1565-13 MBOAT2-YWHAE 28 26 chr2:9003540:- chr17:1345499:- INFRAME NA TCGA-24-1424-01A-01R-1565-13 ZNF675-DNAH17 26 11 chr19:23687031:- chr17:78507805:- INFRAME NA TCGA-24-1424-01A-01R-1565-13 USP18-BAG6 22 15 chr22:18157820:+ chr6:31639226:- FRAMESHIFT NA TCGA-24-1424-01A-01R-1565-13 ZNF234-CEACAM20 19 8 chr19:44150505:+ chr19:44525244:- INFRAME NA TCGA-24-1424-01A-01R-1565-13 ZCCHC17-NDP 15 2 chr1:31348974:+ chrX:43958852:- . NA TCGA-24-1424-01A-01R-1565-13 ZMIZ1-C10orf107 13 8 chr10:79162133:+ chr10:61686041:+ . NA TCGA-24-1427-01A-01R-1565-13 PGS1-SYNGR2 12 9 chr17:78378808:+ chr17:78171739:+ INFRAME NA TCGA-24-1428-01A-01R-1564-13 NEO1-THSD4 161 31 chr15:73178427:+ chr15:71411687:+ INFRAME NA TCGA-24-1428-01A-01R-1564-13 ACAP2-DOCK8 37 6 chr3:195392090:- chr9:340159:+ FRAMESHIFT NA TCGA-24-1428-01A-01R-1564-13 TTC19-TMEM45A 34 10 chr17:16026702:+ chr3:100568822:+ FRAMESHIFT NA TCGA-24-1428-01A-01R-1564-13 TET3-C2orf78 22 2 chr2:74003166:+ chr2:73813477:+ FRAMESHIFT NA TCGA-24-1430-01A-01R-1566-13 FAM171A1-DCLRE1CP1 37 15 chr10:15370956:- chr10:15021863:- . NA TCGA-24-1430-01A-01R-1566-13 ZNF292-SLIRP 30 7 chr6:87155759:+ chr14:77710838:+ INFRAME NA TCGA-24-1430-01A-01R-1566-13 WFDC2-PIGT 17 6 chr20:45470532:+ chr20:45447635:+ . NA TCGA-24-1430-01A-01R-1566-13 OXR1-CLEC18C 7 3 chr8:106519139:+ chr16:70181850:+ FRAMESHIFT NA TCGA-24-1430-01A-01R-1566-13 AJUBA-SLC7A8 6 4 chr14:22974047:- chr14:23183038:- . NA TCGA-24-1430-01A-01R-1566-13 CUL7-USP10 1 9 chr6:43045986:- chr16:84775160:+ INFRAME NA TCGA-24-1436-01A-01R-1566-13 ZNF589-HMCES 14 22 chr3:48241214:+ chr3:129298354:+ FRAMESHIFT NA TCGA-24-1436-01A-01R-1566-13 BTBD2-SBNO2 9 13 chr19:2013547:- chr19:1127765:- . NA TCGA-24-1467-01A-01R-1566-13 SCAP-SLC25A20 21 7 chr3:47475799:- chr3:48892072:- . NA TCGA-24-1467-01A-01R-1566-13 SKAP1-ZNF74 19 6 chr17:48396680:- chr22:20400632:+ FRAMESHIFT NA TCGA-24-1467-01A-01R-1566-13 CCDC57-RAB40B 11 3 chr17:82188219:- chr17:82664556:- FRAMESHIFT NA TCGA-24-1467-01A-01R-1566-13 CCDC9-SAE1 11 3 chr19:47256609:+ chr19:47169818:+ . NA TCGA-24-1467-01A-01R-1566-13 TAF2-DEPTOR 6 8 chr8:119819346:- chr8:119928400:+ INFRAME NA TCGA-24-1467-01A-01R-1566-13 MAP4-CCDC85B 4 4 chr3:47998638:- chr11:65890857:+ INFRAME NA TCGA-24-1469-01A-01R-1566-13 SH3PXD2A-RB1 92 54 chr10:103611581:- chr13:48464998:+ INFRAME Likely Oncogenic NA TCGA-24-1469-01A-01R-1566-13 MCL1-CTSS 34 23 chr1:150578843:- chr1:150747879:- INFRAME NA TCGA-24-1469-01A-01R-1566-13 ACTN4-SUMO2P17 33 11 chr19:38647907:+ chr17:48879345:- . NA TCGA-24-1469-01A-01R-1566-13 INTS4-LGALS3BP 26 33 chr11:77994590:- chr17:78972704:- FRAMESHIFT NA TCGA-24-1469-01A-01R-1566-13 MOB3B-CAAP1 23 4 chr9:27529555:- chr9:26861139:- . NA TCGA-24-1469-01A-01R-1566-13 GTF2I-POM121 16 1 chr7:74700634:+ chr7:72948918:+ . NA TCGA-24-1469-01A-01R-1566-13 MECOM-LRRC31 15 3 chr3:169663336:- chr3:169869872:- . NA TCGA-24-1469-01A-01R-1566-13 DAG1-MAP4 10 10 chr3:49533680:+ chr3:47877523:- . NA TCGA-24-1469-01A-01R-1566-13 ADGRB2-PTP4A2 9 6 chr1:31755999:- chr1:31919658:- . NA TCGA-24-1469-01A-01R-1566-13 BMP1-FAM160B2 10 1 chr8:22180483:+ chr8:22094440:+ INFRAME NA TCGA-24-1469-01A-01R-1566-13 HSDL1-CORO1A 5 6 chr16:84145080:- chr16:30185209:+ . NA TCGA-24-1469-01A-01R-1566-13 SRPK2-PUS7 3 2 chr7:105268806:- chr7:105482440:- INFRAME NA TCGA-24-1474-01A-01R-1566-13 NOTCH2-MNDA 432 201 chr1:119935472:- chr1:158845587:+ FRAMESHIFT NA TCGA-24-1474-01A-01R-1566-13 ATP5I-NSD2 151 234 chr4:673912:- chr4:1935144:+ INFRAME NA TCGA-24-1474-01A-01R-1566-13 NAA25-ATXN2 64 40 chr12:112060270:- chr12:111453845:- FRAMESHIFT NA TCGA-24-1474-01A-01R-1566-13 HCP5-LY6G6C 55 5 chr6:31400763:+ chr6:31719310:- . NA TCGA-24-1474-01A-01R-1566-13 MICA-LY6G6C 55 5 chr6:31400763:+ chr6:31719310:- . NA TCGA-24-1474-01A-01R-1566-13 ZNF93-CYP4F22 46 21 chr19:19901091:+ chr19:15523693:+ . NA TCGA-24-1474-01A-01R-1566-13 TP53-SLC6A4 28 81 chr17:7687377:- chr17:30222915:- . Likely Oncogenic NA TCGA-24-1474-01A-01R-1566-13 EPS15L1-CIB3 37 3 chr19:16471913:- chr19:16169722:- INFRAME NA TCGA-24-1474-01A-01R-1566-13 UBE4B-OR4G4P 16 4 chr1:10072214:+ chr1:53282:+ . NA TCGA-24-1474-01A-01R-1566-13 ST3GAL1-GPR39 14 9 chr8:133571693:- chr2:132645101:+ . NA TCGA-24-1474-01A-01R-1566-13 C1orf21-PCAT1 12 6 chr1:184387368:+ chr8:126877672:+ . NA TCGA-24-1474-01A-01R-1566-13 APBB2-ZFYVE28 9 9 chr4:41214405:- chr4:2354073:- . NA TCGA-24-1474-01A-01R-1566-13 ZNF587B-LHFPL4 8 3 chr19:57839149:+ chr3:9506203:- INFRAME NA TCGA-24-1474-01A-01R-1566-13 SLC7A2-DHTKD1 8 2 chr8:17502302:+ chr10:12112900:+ . NA TCGA-24-1474-01A-01R-1566-13 MARK3-KIF26A 6 8 chr14:103457212:+ chr14:104166859:+ FRAMESHIFT NA TCGA-24-1474-01A-01R-1566-13 ARHGEF18-INSR 1 1 chr19:7395247:+ chr19:7267896:- . NA TCGA-24-1550-01A-01R-1566-13 NFYC-CAP1 69 41 chr1:40691867:+ chr1:40059337:+ . NA TCGA-24-1550-01A-01R-1566-13 CLSTN1-SPA17 53 28 chr1:9823643:- chr11:124691696:+ FRAMESHIFT NA TCGA-24-1550-01A-01R-1566-13 RCC1-CHEK2P5 15 0 chr1:28508160:+ chr10:38713197:+ . NA TCGA-24-1550-01A-01R-1566-13 SNHG3-CHEK2P5 15 0 chr1:28508160:+ chr10:38713197:+ . NA TCGA-24-1550-01A-01R-1566-13 ATP8A2-CRYL1 12 5 chr13:25862408:+ chr13:20413387:- INFRAME NA TCGA-24-1551-01A-01R-1566-13 ZNF805-ETFB 148 32 chr19:57240921:+ chr19:51354308:- INFRAME NA TCGA-24-1551-01A-01R-1566-13 ZDHHC5-SMTNL1 134 33 chr11:57668187:+ chr11:57545881:+ . NA TCGA-24-1551-01A-01R-1566-13 TRAPPC10-RRP1 66 4 chr21:44012560:+ chr21:43791350:+ INFRAME NA TCGA-24-1551-01A-01R-1566-13 CTCFL-POLR3H 28 4 chr20:57524203:- chr22:41528826:- . NA TCGA-24-1551-01A-01R-1566-13 DNAJC2-SLC26A5 25 10 chr7:103341764:- chr7:103352926:- FRAMESHIFT NA TCGA-24-1551-01A-01R-1566-13 PTK2-TSTA3 10 6 chr8:140674298:- chr8:143616723:- . NA TCGA-24-1551-01A-01R-1566-13 SGPL1-ADAMTS14 8 2 chr10:70816880:+ chr10:70732254:+ FRAMESHIFT NA TCGA-24-1551-01A-01R-1566-13 SET-GLE1 8 1 chr9:128684007:+ chr9:128522668:+ FRAMESHIFT NA TCGA-24-1551-01A-01R-1566-13 NEDD4L-TBC1D17 7 2 chr18:58252054:+ chr19:49878498:+ INFRAME NA TCGA-24-1551-01A-01R-1566-13 NAB1-MFSD6 6 3 chr2:190673152:+ chr2:190488657:+ FRAMESHIFT NA TCGA-24-1551-01A-01R-1566-13 C7orf49-C7orf73 6 2 chr7:135167732:- chr7:135688904:+ INFRAME NA TCGA-24-1552-01A-01R-1566-13 NUDT19-SLC7A9 56 26 chr19:32692674:+ chr19:32833323:- INFRAME NA TCGA-24-1552-01A-01R-1566-13 NNT-NIM1K 21 13 chr5:43628387:+ chr5:43277057:+ INFRAME NA TCGA-24-1552-01A-01R-1566-13 FBXO36-ALCAM 11 5 chr2:229922606:+ chr3:105571849:+ . NA TCGA-24-1562-01A-01R-1566-13 AFAP1-KCNIP4 57 20 chr4:7786194:- chr4:20730129:- INFRAME NA TCGA-24-1562-01A-01R-1566-13 CREBBP-SRL 34 1 chr16:3744894:- chr16:4204634:- INFRAME Likely Oncogenic NA TCGA-24-1562-01A-01R-1566-13 STT3A-MIR4300HG 12 1 chr11:125597119:+ chr11:82356628:- . NA TCGA-24-1564-01A-01R-1566-13 KIAA0753-PER1 29 21 chr17:6635011:- chr17:8150845:- . NA TCGA-24-1603-01A-01R-1566-13 LACE1-SNX3 16 5 chr6:108295218:+ chr6:108223045:- FRAMESHIFT NA TCGA-24-1603-01A-01R-1566-13 CACNA1D-DNAH1 15 5 chr3:53501720:+ chr3:52357614:+ INFRAME NA TCGA-24-1603-01A-01R-1566-13 DNAH1-PRKCD 13 8 chr3:52357735:+ chr3:53187340:+ INFRAME NA TCGA-24-1603-01A-01R-1566-13 TRAPPC2B-ZNF550 9 4 chr19:57363943:+ chr19:57535270:- . NA TCGA-24-1616-01A-01R-1566-13 ADIPOR2-NINJ2 192 87 chr12:1691213:+ chr12:566178:- . NA TCGA-24-1616-01A-01R-1566-13 PKN1-ADGRE3 134 53 chr19:14433542:+ chr19:14638340:- INFRAME NA TCGA-24-1616-01A-01R-1566-13 SHROOM3-MTHFD2L 33 19 chr4:76586469:+ chr4:74199794:+ . NA TCGA-24-1842-01A-01R-1567-13 ZNF195-FAM160A2 113 32 chr11:3379038:- chr11:6219050:- INFRAME NA TCGA-24-1842-01A-01R-1567-13 MARK3-BCAS3 77 12 chr14:103386080:+ chr17:61368327:+ FRAMESHIFT NA TCGA-24-1842-01A-01R-1567-13 POLE2-RPS29 75 11 chr14:49688136:- chr14:49586049:- INFRAME NA TCGA-24-1842-01A-01R-1567-13 SSBP3-DHCR24 66 19 chr1:54401861:- chr1:54876047:- INFRAME NA TCGA-24-1842-01A-01R-1567-13 MECOM-LRRC31 55 3 chr3:169663336:- chr3:169869872:- . NA TCGA-24-1842-01A-01R-1567-13 CRK-SMG6 36 5 chr17:1455877:- chr17:2061622:- INFRAME NA TCGA-24-1842-01A-01R-1567-13 EXT2-TTC17 33 9 chr11:44130138:+ chr11:43414590:+ INFRAME NA TCGA-24-1842-01A-01R-1567-13 MYBBP1A-CAMTA2 21 5 chr17:4548524:- chr17:4983043:- FRAMESHIFT NA TCGA-24-1842-01A-01R-1567-13 LAMC2-RABGAP1L 19 3 chr1:183236604:+ chr1:174637375:+ INFRAME NA TCGA-24-1842-01A-01R-1567-13 PEX6-MBD3L1 14 3 chr6:42965681:- chr19:8840912:+ . NA TCGA-24-1842-01A-01R-1567-13 CAPZA1-CTTNBP2NL 12 0 chr1:112659779:+ chr1:112448942:+ INFRAME NA TCGA-24-1842-01A-01R-1567-13 PEPD-ZNF829 10 6 chr19:33512593:- chr19:36892471:- FRAMESHIFT NA TCGA-24-1842-01A-01R-1567-13 WWOX-NUDT7 11 2 chr16:78115154:+ chr16:77741582:+ INFRAME NA TCGA-24-1842-01A-01R-1567-13 MKL2-RBFOX1 8 3 chr16:14140760:+ chr16:7518147:+ FRAMESHIFT NA TCGA-24-1843-01A-01R-1567-13 CCDC6-RCC1 64 3 chr10:59906122:- chr1:28529858:+ INFRAME NA TCGA-24-1843-01A-01R-1567-13 ITGB5-PDLIM5 24 4 chr3:124859242:- chr4:94586408:+ INFRAME NA TCGA-24-1843-01A-01R-1567-13 ACTN4-CIB3 16 7 chr19:38647907:+ chr19:16164913:- INFRAME NA TCGA-24-1846-01A-01R-1567-13 EDC3-SCAMP2 73 5 chr15:74695880:- chr15:74848701:- . NA TCGA-24-1846-01A-01R-1567-13 MPHOSPH10-ATP6V1B1 20 4 chr2:71134797:+ chr2:70958046:+ INFRAME NA TCGA-24-1847-01A-01R-1566-13 PIGS-SPAG5 43 12 chr17:28560049:- chr17:28586499:- INFRAME NA TCGA-24-1847-01A-01R-1566-13 PHF12-TIAF1 21 21 chr17:28921688:- chr17:29074914:- . NA TCGA-24-1847-01A-01R-1566-13 PRKAR1B-GNA12 8 3 chr7:606193:- chr7:2733501:- INFRAME NA TCGA-24-1850-01A-01R-1567-13 TEKT4P2-ERAS 40 1 chr21:9127489:- chrX:48829081:+ . NA TCGA-24-1850-01A-01R-1567-13 PLD3-RPS9 24 8 chr19:40348768:+ chr19:54231741:+ . NA TCGA-24-1850-01A-01R-1567-13 KIRREL-HMMR 17 1 chr1:157993728:+ chr5:163463856:+ INFRAME NA TCGA-24-2019-01A-02R-1568-13 GNAZ-MIF 129 14 chr22:23070570:+ chr22:23894772:+ . NA TCGA-24-2019-01A-02R-1568-13 LPIN2-RFPL1 63 36 chr18:3003431:- chr22:29438945:+ . NA TCGA-24-2019-01A-02R-1568-13 ST3GAL2-CATSPERB 65 16 chr16:70438949:- chr14:91581107:- . NA TCGA-24-2019-01A-02R-1568-13 ZDHHC21-PSIP1 40 8 chr9:14680033:- chr9:15472750:- . NA TCGA-24-2019-01A-02R-1568-13 MOB2-PRR33 39 9 chr11:1471295:- chr11:1890593:- . NA TCGA-24-2019-01A-02R-1568-13 CTDSPL2-CASC4 33 5 chr15:44459200:+ chr15:44379690:+ FRAMESHIFT NA TCGA-24-2019-01A-02R-1568-13 NXN-WWOX 19 4 chr17:979319:- chr16:79211608:+ INFRAME NA TCGA-24-2019-01A-02R-1568-13 CNOT3-KMT2B 14 5 chr19:54141479:+ chr19:35723141:+ . Inconclusive NA TCGA-24-2024-01A-02R-1568-13 PIAS3-REN 96 19 chr1:145859665:- chr1:204162163:- . NA TCGA-24-2024-01A-02R-1568-13 COL23A1-FAM193B 65 13 chr5:178560682:- chr5:177520181:- . NA TCGA-24-2033-01A-01R-1568-13 PAK1-NARS2 64 9 chr11:77473552:- chr11:78478683:- . NA TCGA-24-2033-01A-01R-1568-13 GADD45GIP1-DAND5 26 1 chr19:12956863:- chr19:12973389:+ FRAMESHIFT NA TCGA-24-2033-01A-01R-1568-13 DDX39A-ADGRE3 23 4 chr19:14413013:- chr19:14651204:- INFRAME NA TCGA-24-2033-01A-01R-1568-13 KLHL14-CCDC178 23 3 chr18:32769645:- chr18:32938091:- FRAMESHIFT NA TCGA-24-2033-01A-01R-1568-13 TMPRSS13-NIPAL2 14 1 chr11:117929287:- chr8:98236214:- FRAMESHIFT NA TCGA-24-2033-01A-01R-1568-13 USP53-SYNPO2 7 1 chr4:119217673:+ chr4:119023430:+ . NA TCGA-24-2033-01A-01R-1568-13 ERBB2-PPP1R1B 2 0 chr17:39700311:+ chr17:39629170:+ FRAMESHIFT NA TCGA-24-2035-01A-01R-1568-13 DPY19L4-SNTG1 17 3 chr8:94726441:+ chr8:50792671:+ FRAMESHIFT NA TCGA-24-2035-01A-01R-1568-13 DLD-BCAP29 16 2 chr7:107906368:+ chr7:107600397:+ INFRAME NA TCGA-24-2261-01A-01R-1568-13 TBC1D9-PAPSS1 27 2 chr4:140755916:- chr4:107614387:- FRAMESHIFT NA TCGA-24-2262-01A-01R-1568-13 ACAP2-APOD 323 36 chr3:195381009:- chr3:195573971:- INFRAME NA TCGA-24-2262-01A-01R-1568-13 SDHAF2-CD5 78 2 chr11:61430182:+ chr11:61123884:+ FRAMESHIFT NA TCGA-24-2262-01A-01R-1568-13 UBE2O-RHBDF2 57 4 chr17:76452725:- chr17:76481545:- . NA TCGA-24-2262-01A-01R-1568-13 VTI1A-GTF2H5 28 2 chr10:112538330:+ chr6:158191977:+ FRAMESHIFT NA TCGA-24-2262-01A-01R-1568-13 USP54-CASC2 28 1 chr10:73536269:- chr10:118098196:+ . NA TCGA-24-2262-01A-01R-1568-13 MARK2-C11orf84 17 9 chr11:63905043:+ chr11:63826928:+ FRAMESHIFT NA TCGA-24-2262-01A-01R-1568-13 TRADD-GFOD2 11 1 chr16:67159838:- chr16:67685802:- . NA TCGA-24-2262-01A-01R-1568-13 ASH1L-C1orf61 10 3 chr1:155521100:- chr1:156430119:- . NA TCGA-24-2262-01A-01R-1568-13 RANBP2-SULT1C3 9 0 chr2:108758548:+ chr2:108253345:+ INFRAME NA TCGA-24-2262-01A-01R-1568-13 DVL2-CST6 8 3 chr17:7230728:- chr11:66012186:+ INFRAME NA TCGA-24-2262-01A-01R-1568-13 ADAM10-MYO1E 7 2 chr15:58717577:- chr15:59188216:- INFRAME NA TCGA-24-2262-01A-01R-1568-13 POLR2C-HS3ST4 7 2 chr16:57463078:+ chr16:26135612:+ FRAMESHIFT NA TCGA-24-2262-01A-01R-1568-13 USB1-MAPKAPK5 6 2 chr16:58017439:+ chr12:111871085:+ INFRAME NA TCGA-24-2262-01A-01R-1568-13 APAF1-TMPO 5 4 chr12:98662806:+ chr12:98537475:+ INFRAME NA TCGA-24-2262-01A-01R-1568-13 RNF19A-KHDRBS2 5 3 chr8:100309867:- chr6:62177312:- . NA TCGA-24-2267-01A-01R-1568-13 MAP2K2-PSMA1 127 3 chr19:4110509:- chr11:14505248:- INFRAME NA TCGA-24-2267-01A-01R-1568-13 C1orf186-SRGAP2 79 13 chr1:206060449:+ chr1:206430162:+ . NA TCGA-24-2267-01A-01R-1568-13 WDR74-SNHG1 21 1 chr11:62839114:- chr11:62854064:- . NA TCGA-24-2267-01A-01R-1568-13 USP40-PMVK 17 2 chr2:233540662:- chr1:154926483:- INFRAME NA TCGA-24-2267-01A-01R-1568-13 DYNLRB1-ITCH 17 0 chr20:34516461:+ chr20:34504331:+ FRAMESHIFT NA TCGA-24-2267-01A-01R-1568-13 MAP2-DEPTOR 13 4 chr2:209424276:+ chr8:120049576:+ . NA TCGA-24-2267-01A-01R-1568-13 DHX16-MDC1 12 2 chr6:30659472:- chr6:30706098:- INFRAME NA TCGA-24-2267-01A-01R-1568-13 SETD5-GXYLT2 9 2 chr3:9397977:+ chr3:72922204:+ . NA TCGA-24-2267-01A-01R-1568-13 ME3-SYTL2 7 0 chr11:86671762:- chr11:85700593:- INFRAME NA TCGA-24-2271-01A-01R-1568-13 FAM91A1-TRMT12 6 1 chr8:123780542:+ chr8:124462027:+ . NA TCGA-24-2271-01A-01R-1568-13 MECOM-LRRC31 6 0 chr3:169663336:- chr3:169856872:- INFRAME NA TCGA-24-2271-01A-01R-1568-13 ARHGEF3-LINGO3 5 2 chr3:57035088:- chr19:2291822:- . NA TCGA-24-2271-01A-01R-1568-13 MAP4-DNAH12 3 4 chr3:48088773:- chr3:57357348:- . NA TCGA-24-2281-01A-01R-1568-13 ACVR1-NFATC1 310 31 chr2:157818385:- chr18:79486248:+ . NA TCGA-24-2281-01A-01R-1568-13 HNRNPL-RPS19BP1 46 9 chr19:38843842:- chr22:39529917:- INFRAME NA TCGA-24-2281-01A-01R-1568-13 HIBCH-DLX1 33 3 chr2:190294546:- chr2:172088003:+ INFRAME NA TCGA-24-2281-01A-01R-1568-13 TARDBP-ATAD3A 7 24 chr1:11012743:+ chr1:1533926:+ . NA TCGA-24-2281-01A-01R-1568-13 ARHGAP42-HIBCH 10 0 chr11:100795166:+ chr2:190213075:- INFRAME NA TCGA-24-2288-01A-01R-1568-13 BMP7-RBM38 414 55 chr20:57174931:- chr20:57407543:+ FRAMESHIFT NA TCGA-24-2288-01A-01R-1568-13 SPON1-STXBP6 188 14 chr11:13963142:+ chr14:24857157:- INFRAME NA TCGA-24-2288-01A-01R-1568-13 TOR1AIP2-ACBD6 71 6 chr1:179877239:- chr1:180314722:- . NA TCGA-24-2288-01A-01R-1568-13 SETD5-CIDEC 55 10 chr3:9424526:+ chr3:9878511:- . NA TCGA-24-2288-01A-01R-1568-13 TNS3-SUN3 29 2 chr7:47582427:- chr7:47996146:- FRAMESHIFT NA TCGA-24-2288-01A-01R-1568-13 PPP2R2A-DHTKD1 15 0 chr8:26293740:+ chr10:12081472:+ INFRAME NA TCGA-24-2288-01A-01R-1568-13 NCOA3-LRRC49 11 0 chr20:47502019:+ chr15:71009807:+ . NA TCGA-24-2288-01A-01R-1568-13 C10orf11-MYO1D 10 2 chr10:76058783:+ chr17:32494915:- FRAMESHIFT NA TCGA-24-2288-01A-01R-1568-13 PHF20-EPB41L1 9 0 chr20:35801605:+ chr20:36197859:+ FRAMESHIFT NA TCGA-24-2288-01A-01R-1568-13 CAMK1D-BNIP3L 8 1 chr10:12349910:+ chr8:26391243:+ FRAMESHIFT NA TCGA-24-2288-01A-01R-1568-13 GTF2IP4-TYW1B 7 0 chr7:73155343:+ chr7:72744601:- . NA TCGA-24-2288-01A-01R-1568-13 ERP27-IGF2 3 5 chr12:14914623:- chr11:2131861:- . NA TCGA-24-2290-01A-01R-1568-13 EIF2A-ANKUB1 75 19 chr3:150552425:+ chr3:149761613:- INFRAME NA TCGA-24-2290-01A-01R-1568-13 FNIP1-MEIKIN 59 8 chr5:131796830:- chr5:131818863:- FRAMESHIFT NA TCGA-24-2290-01A-01R-1568-13 GANAB-SSRP1 48 0 chr11:62646562:- chr11:57335240:- . NA TCGA-24-2290-01A-01R-1568-13 NUP160-AGBL2 13 5 chr11:47847848:- chr11:47704728:- FRAMESHIFT NA TCGA-24-2298-01A-01R-1569-13 UCP2-AHNAK 135 6 chr11:73982721:- chr11:62433891:- . NA TCGA-24-2298-01A-01R-1569-13 HOMER2-BTBD1 87 8 chr15:82952531:- chr15:83018225:- FRAMESHIFT NA TCGA-24-2298-01A-01R-1569-13 MBOAT1-C1orf210 39 4 chr6:20212136:- chr1:43283368:- . NA TCGA-24-2298-01A-01R-1569-13 TAOK1-SARM1 24 2 chr17:29391024:+ chr17:28395905:+ . NA TCGA-24-2298-01A-01R-1569-13 AGAP1-IFIH1 15 2 chr2:235494849:+ chr2:162310933:- FRAMESHIFT NA TCGA-24-2298-01A-01R-1569-13 GRAMD4-RIBC2 14 0 chr22:46577290:+ chr22:45430900:+ . NA TCGA-25-1312-01A-01R-1565-13 ENOX1-RAD51B 11 5 chr13:43786652:- chr14:68468172:+ . NA TCGA-25-1312-01A-01R-1565-13 MAST1-TNFRSF19 11 2 chr19:12841066:+ chr13:23615867:+ FRAMESHIFT NA TCGA-25-1312-01A-01R-1565-13 NRIP1-SH3BGR 9 1 chr21:15014344:- chr21:39462375:+ . NA TCGA-25-1313-01A-01R-1565-13 DIDO1-LRRC4B 26 9 chr20:62911190:- chr19:50519415:- INFRAME NA TCGA-25-1313-01A-01R-1565-13 ZNF433-DNAH17 22 19 chr19:12035537:- chr17:78551638:- FRAMESHIFT NA TCGA-25-1313-01A-01R-1565-13 TTLL11-VWCE 18 4 chr9:122039272:- chr11:61282905:- INFRAME NA TCGA-25-1313-01A-01R-1565-13 LPIN2-TRAT1 17 5 chr18:3013087:- chr3:108847068:+ . NA TCGA-25-1314-01A-01R-1565-13 MAPK9-UBL7 118 29 chr5:180291848:- chr15:74456671:- . NA TCGA-25-1314-01A-01R-1565-13 STK26-SAGE3P 41 9 chrX:132023659:+ chrX:135642375:- . NA TCGA-25-1314-01A-01R-1565-13 STRBP-SLC35D2 20 3 chr9:123268436:- chr9:96368305:- . NA TCGA-25-1314-01A-01R-1565-13 UBL7-MAPK9 15 4 chr15:74458684:- chr5:180280608:- . NA TCGA-25-1315-01A-01R-1565-13 JUP-SCGB2B2 73 35 chr17:41768969:- chr19:34632640:- . NA TCGA-25-1315-01A-01R-1565-13 UCK2-PBX1 36 32 chr1:165827932:+ chr1:164792494:+ FRAMESHIFT NA TCGA-25-1315-01A-01R-1565-13 HNRNPC-CHD8 36 7 chr14:21269298:- chr14:21431858:- . NA TCGA-25-1315-01A-01R-1565-13 ANKRD13C-OR5V1 19 12 chr1:70300764:- chr6:29356277:- . NA TCGA-25-1315-01A-01R-1565-13 LTBP2-NEK9 12 1 chr14:74532426:- chr14:75091478:- INFRAME NA TCGA-25-1319-01A-01R-1565-13 ASNA1-RLN3 153 72 chr19:12738658:+ chr19:14030710:+ FRAMESHIFT NA TCGA-25-1319-01A-01R-1565-13 ZNF791-RNASEH2A 97 42 chr19:12611082:+ chr19:12807008:+ FRAMESHIFT NA TCGA-25-1319-01A-01R-1565-13 ZNF443-MYO9B 40 35 chr19:12440912:- chr19:17192746:+ INFRAME NA TCGA-25-1319-01A-01R-1565-13 PAK1-POU5F1B 20 14 chr11:77473552:- chr8:127414888:+ . NA TCGA-25-1319-01A-01R-1565-13 RBBP4-HIVEP3 19 6 chr1:32672901:+ chr1:41628947:- . NA TCGA-25-1319-01A-01R-1565-13 HOOK2-ZC3H8 15 4 chr19:12763127:- chr2:112214711:- . NA TCGA-25-1319-01A-01R-1565-13 ZNF684-CPA6 12 8 chr1:40533181:+ chr8:67624251:- FRAMESHIFT NA TCGA-25-1319-01A-01R-1565-13 DNAJB1-MED26 10 11 chr19:14516466:- chr19:16578409:- INFRAME NA TCGA-25-1319-01A-01R-1565-13 ILVBL-TECR 6 5 chr19:15115850:- chr19:14562525:+ INFRAME NA TCGA-25-1319-01A-01R-1565-13 FCHSD2-ZNF564 5 6 chr11:72867865:- chr19:12528696:- INFRAME NA TCGA-25-1319-01A-01R-1565-13 TECR-ILVBL 4 7 chr19:14529711:+ chr19:15116522:- FRAMESHIFT NA TCGA-25-1323-01A-01R-1565-13 NOTCH2NL-UBE2H 58 3 chr1:146228709:- chr7:129858941:- . NA TCGA-25-1323-01A-01R-1565-13 USP6NL-RNF216 29 12 chr10:11597631:- chr7:5624125:- FRAMESHIFT NA TCGA-25-1323-01A-01R-1565-13 AGAP3-SPP2 27 4 chr7:151128684:+ chr2:234069928:+ FRAMESHIFT NA TCGA-25-1323-01A-01R-1565-13 BCL2L11-CCDC170 22 2 chr2:111150147:+ chr6:151573174:+ INFRAME Likely Oncogenic NA TCGA-25-1323-01A-01R-1565-13 NFE2L1-SP2 18 4 chr17:48057502:+ chr17:47922962:+ INFRAME NA TCGA-25-1323-01A-01R-1565-13 GATAD2B-S100A8 12 13 chr1:153922733:- chr1:153390557:- . NA TCGA-25-1323-01A-01R-1565-13 OVOL2-DZANK1 10 1 chr20:18056657:- chr20:18390459:- INFRAME NA TCGA-25-1323-01A-01R-1565-13 SFXN2-SUFU 8 6 chr10:102714681:+ chr10:102592582:+ . NA TCGA-25-1323-01A-01R-1565-13 KNSTRN-BUB1B 7 5 chr15:40392023:+ chr15:40206184:+ INFRAME NA TCGA-25-1323-01A-01R-1565-13 ZNF786-ABCF2 5 5 chr7:149090623:- chr7:151216029:- INFRAME NA TCGA-25-1329-01A-01R-1565-13 MCM5-LYN 69 19 chr22:35403542:+ chr8:55998346:+ INFRAME NA TCGA-25-1329-01A-01R-1565-13 SPTLC3-PLPP1 38 13 chr20:13110217:+ chr5:55441908:- INFRAME NA TCGA-25-1329-01A-01R-1565-13 ITPR2-MRPS35 36 8 chr12:26621123:- chr12:27735447:+ INFRAME NA TCGA-25-1329-01A-01R-1565-13 ARRDC2-KCNN1 25 5 chr19:18001573:+ chr19:17973808:+ FRAMESHIFT NA TCGA-25-1329-01A-01R-1565-13 CBX5-GTSF1 13 17 chr12:54252041:- chr12:54471277:- . NA TCGA-25-1329-01A-01R-1565-13 KCNN1-SLC27A1 8 8 chr19:17989818:+ chr19:17483882:+ . NA TCGA-25-2391-01A-01R-1569-13 LYAR-CTBP1 63 2 chr4:4283621:- chr4:1228343:- FRAMESHIFT NA TCGA-25-2392-01A-01R-1569-13 NUP35-KCNH7 32 1 chr2:183151649:+ chr2:162435597:- FRAMESHIFT NA TCGA-25-2392-01A-01R-1569-13 MYO3B-TSHZ2 31 4 chr2:170236136:+ chr20:53487144:+ . NA TCGA-25-2392-01A-01R-1569-13 KTN1-LGALS3 24 9 chr14:55580354:+ chr14:55137370:+ . NA TCGA-25-2392-01A-01R-1569-13 EEF1D-PUF60 13 1 chr8:143597348:- chr8:143821913:- . NA TCGA-25-2392-01A-01R-1569-13 SPECC1L-BCRP3 12 2 chr22:24276803:+ chr22:24644740:+ . NA TCGA-25-2393-01A-01R-1569-13 SS18-UBE2I 477 89 chr18:26052624:- chr16:1326832:+ . NA TCGA-25-2393-01A-01R-1569-13 BEND7-PHYH 131 14 chr10:13526138:- chr10:13281110:- . NA TCGA-25-2393-01A-01R-1569-13 HMGA2-HNRNPM 14 0 chr12:65828087:+ chr19:8455405:+ FRAMESHIFT NA TCGA-25-2396-01A-01R-1569-13 GNB1-NADK 31 1 chr1:1890820:- chr1:1765446:- . NA TCGA-25-2396-01A-01R-1569-13 BRD4-CYP4F22 19 3 chr19:15332290:- chr19:15523693:+ . Oncogenic NA TCGA-25-2396-01A-01R-1569-13 SMAP2-CAP1 10 1 chr1:40374223:+ chr1:40059337:+ . NA TCGA-25-2397-01A-01R-1569-13 AHNAK-MACROD1 263 65 chr11:62518965:- chr11:64000295:- FRAMESHIFT NA TCGA-25-2397-01A-01R-1569-13 PRRC2B-NUP155 249 38 chr9:131394263:+ chr5:37292985:- . NA TCGA-25-2397-01A-01R-1569-13 PLXNB1-COL7A1 54 30 chr3:48413197:- chr3:48587932:- . NA TCGA-25-2397-01A-01R-1569-13 PPP1CB-SSPN 30 17 chr2:28779039:+ chr12:26179996:+ . NA TCGA-25-2397-01A-01R-1569-13 PRC1-VPS33B 17 5 chr15:90984693:- chr15:91017885:- INFRAME NA TCGA-25-2399-01A-01R-1569-13 DNM2-PRKCSH 112 16 chr19:10718403:+ chr19:11436041:+ . NA TCGA-25-2399-01A-01R-1569-13 ZNF826P-NUMBL 73 10 chr19:20408950:- chr19:40677421:- . NA TCGA-25-2399-01A-01R-1569-13 ARHGEF18-INSR 23 4 chr19:7395247:+ chr19:7267896:- . NA TCGA-25-2400-01A-01R-1569-13 SCMH1-TRAPPC3 245 29 chr1:41242059:- chr1:36140166:- . NA TCGA-25-2400-01A-01R-1569-13 NECAP2-EPHA2 44 14 chr1:16449201:+ chr1:16130419:- INFRAME NA TCGA-25-2400-01A-01R-1569-13 USP34-FAM178B 43 6 chr2:61470650:- chr2:96947902:- INFRAME NA TCGA-25-2400-01A-01R-1569-13 CDH6-SKP2 31 4 chr5:31193886:+ chr5:36152771:+ . NA TCGA-25-2400-01A-01R-1569-13 TULP4-SYTL3 22 12 chr6:158232303:+ chr6:158745480:+ . NA TCGA-25-2400-01A-01R-1569-13 PRPF40B-EGFLAM-AS2 20 6 chr12:49632880:+ chr5:38401221:- . NA TCGA-25-2400-01A-01R-1569-13 ERGIC1-RANBP17 13 1 chr5:172924109:+ chr5:171161407:+ . NA TCGA-25-2400-01A-01R-1569-13 PLCB1-WDFY3-AS2 10 0 chr20:8150371:+ chr4:85004230:+ . NA TCGA-25-2404-01A-01R-1569-13 BCAT1-AKT2 17 2 chr12:24894275:- chr19:40265351:- . Likely Oncogenic NA TCGA-29-1688-01A-01R-1566-13 EIF3L-CDC42EP1 12 2 chr22:37878171:+ chr22:37566072:+ . NA TCGA-29-1688-01A-01R-1566-13 COA1-POLR2J4 10 1 chr7:43729429:- chr7:43973323:- . NA TCGA-29-1688-01A-01R-1566-13 SNAPC1-PRKCH 4 3 chr14:61778910:+ chr14:61391225:+ INFRAME NA TCGA-29-1691-01A-01R-1566-13 ANKRD17-AK2 65 29 chr4:73258274:- chr1:33014592:- . NA TCGA-29-1691-01A-01R-1566-13 ROCK2-MEIS1 28 6 chr2:11343996:- chr2:66547943:+ INFRAME NA TCGA-29-1691-01A-01R-1566-13 IPPK-IARS 27 7 chr9:92634386:- chr9:92210889:- FRAMESHIFT NA TCGA-29-1691-01A-01R-1566-13 NIPAL2-EBAG9 24 6 chr8:98294003:- chr8:109564439:+ FRAMESHIFT NA TCGA-29-1691-01A-01R-1566-13 NUP133-PARPBP 22 3 chr1:229498136:- chr12:102195951:+ INFRAME NA TCGA-29-1691-01A-01R-1566-13 DSP-FARS2 17 7 chr6:7542085:+ chr6:5545180:+ FRAMESHIFT NA TCGA-29-1691-01A-01R-1566-13 GRK3-NBPF14 14 0 chr22:25604453:+ chr1:148640097:- . NA TCGA-29-1691-01A-01R-1566-13 DDAH2-MSH5 8 3 chr6:31730051:- chr6:31758165:+ . NA TCGA-29-1693-01A-01R-1567-13 SIL1-ECSCR 56 24 chr5:139121035:- chr5:139454923:- INFRAME NA TCGA-29-1693-01A-01R-1567-13 SYNE4-THAP8 32 6 chr19:36006523:- chr19:36039564:- FRAMESHIFT NA TCGA-29-1693-01A-01R-1567-13 NUAK2-LEMD1 2 0 chr1:205311705:- chr1:205381856:- INFRAME NA TCGA-29-1694-01A-01R-1567-13 UBN1-SRRM2 136 11 chr16:4847339:+ chr16:2769932:+ . NA TCGA-29-1694-01A-01R-1567-13 HSP90AB1-CAPN11 14 2 chr6:44247195:+ chr6:44166758:+ . NA TCGA-29-1694-01A-01R-1567-13 PTK7-KLHDC3 11 5 chr6:43076567:+ chr6:43017134:+ . NA TCGA-29-1694-01A-01R-1567-13 SWI5-DNM1 10 2 chr9:128286033:+ chr9:128218231:+ FRAMESHIFT NA TCGA-29-1695-01A-01R-1567-13 CSF1-GSTM5 70 7 chr1:109925202:+ chr1:109775072:+ . NA TCGA-29-1695-01A-01R-1567-13 LRIG1-PPM1L 14 4 chr3:66500190:- chr3:160961736:+ FRAMESHIFT NA TCGA-29-1697-01A-01R-1567-13 PPIA-OGDH 79 16 chr7:44799874:+ chr7:44693825:+ FRAMESHIFT NA TCGA-29-1697-01A-01R-1567-13 MIER2-RPL26 45 1 chr19:325635:- chr17:8382315:- . NA TCGA-29-1697-01A-01R-1567-13 CBFB-CES4A 34 7 chr16:67036755:+ chr16:66995628:+ FRAMESHIFT NA TCGA-29-1697-01A-01R-1567-13 CBX1-SKAP1 24 4 chr17:48076865:- chr17:48137337:- FRAMESHIFT NA TCGA-29-1697-01A-01R-1567-13 MX2-FAM3B 22 10 chr21:41380151:+ chr21:41344476:+ FRAMESHIFT NA TCGA-29-1697-01A-01R-1567-13 MAP3K12-ATF7 16 5 chr12:53483101:- chr12:53514201:- . NA TCGA-29-1697-01A-01R-1567-13 RFX5-POGZ 13 4 chr1:151344197:- chr1:151442205:- . NA TCGA-29-1697-01A-01R-1567-13 MALAT1-DPF2 11 3 chr11:65503569:+ chr11:65345642:+ . NA TCGA-29-1699-01A-01R-1567-13 KIF3C-RBKS 87 29 chr2:25980373:- chr2:27781788:- INFRAME NA TCGA-29-1699-01A-01R-1567-13 GYS1-HOMER3 63 25 chr19:48991302:- chr19:18934410:- INFRAME NA TCGA-29-1701-01A-01R-1567-13 BAZ2A-ATP5B 29 1 chr12:56630776:- chr12:56638423:- . NA TCGA-29-1701-01A-01R-1567-13 ZNF850-COX6B1 11 2 chr19:36761643:- chr19:35658594:+ INFRAME NA TCGA-29-1701-01A-01R-1567-13 ZNF136-CALR 8 3 chr19:12163206:+ chr19:12939134:+ FRAMESHIFT NA TCGA-29-1702-01A-01R-1567-13 NSD3-MUCL1 169 75 chr8:38381799:- chr12:54855116:+ . NA TCGA-29-1702-01A-01R-1567-13 ZDHHC17-ANO4 119 20 chr12:76764329:+ chr12:100901646:+ . NA TCGA-29-1702-01A-01R-1567-13 PAFAH1B1-SMYD4 82 21 chr17:2594006:+ chr17:1828006:- . NA TCGA-29-1702-01A-01R-1567-13 KIAA0319L-CASC18 77 18 chr1:35554350:- chr12:105737256:+ . NA TCGA-29-1702-01A-01R-1567-13 CHP1-SMAD3 67 5 chr15:41262883:+ chr15:67190413:+ FRAMESHIFT Likely Oncogenic NA TCGA-29-1702-01A-01R-1567-13 AGO4-CASC18 45 7 chr1:35826835:+ chr12:105737256:+ . NA TCGA-29-1702-01A-01R-1567-13 PPTC7-IGF1 44 8 chr12:110582809:- chr12:102475799:- FRAMESHIFT NA TCGA-29-1702-01A-01R-1567-13 STAU2-PAWR 41 11 chr8:73738284:- chr12:79621207:- INFRAME NA TCGA-29-1702-01A-01R-1567-13 RAP1GAP2-TEKT1 30 4 chr17:2800550:+ chr17:6815962:- INFRAME NA TCGA-29-1702-01A-01R-1567-13 INO80-THSD4 28 8 chr15:41020900:- chr15:71728549:+ INFRAME NA TCGA-29-1702-01A-01R-1567-13 SH2B3-FBXO21 27 1 chr12:111406277:+ chr12:117146277:- . NA TCGA-29-1702-01A-01R-1567-13 VPS53-RTN4RL1 18 3 chr17:601795:- chr17:1937808:- FRAMESHIFT NA TCGA-29-1702-01A-01R-1567-13 MCTP2-CPEB1 15 4 chr15:94370180:+ chr15:82627367:- FRAMESHIFT NA TCGA-29-1702-01A-01R-1567-13 TTBK2-EMC7 14 6 chr15:42920438:- chr15:34096014:- . NA TCGA-29-1702-01A-01R-1567-13 CRY1-SVOP 12 3 chr12:107092804:- chr12:108983761:- INFRAME NA TCGA-29-1703-01A-01R-1567-13 ARID4A-KIAA0586 76 6 chr14:58298700:+ chr14:58540071:+ . NA TCGA-29-1703-01A-01R-1567-13 MYO19-SLC11A1 21 6 chr17:36498266:- chr2:218394925:+ INFRAME NA TCGA-29-1703-01A-01R-1567-13 ZNF626-RERG 13 9 chr19:20645684:- chr12:15337470:- . NA TCGA-29-1703-01A-01R-1567-13 BCAT1-VPS72 3 7 chr12:24878530:- chr1:151178145:- FRAMESHIFT NA TCGA-29-1710-01A-02R-1567-13 RFX1-CEACAMP3 51 9 chr19:13972743:- chr19:41604841:+ . NA TCGA-29-1710-01A-02R-1567-13 ZFP28-SLC35E1 32 4 chr19:56539716:+ chr19:16568169:- INFRAME NA TCGA-29-1710-01A-02R-1567-13 UBE2G1-PELP1 13 4 chr17:4366271:- chr17:4682952:- FRAMESHIFT NA TCGA-29-1710-01A-02R-1567-13 KLHL14-CCDC178 13 2 chr18:32741928:- chr18:32974681:- FRAMESHIFT NA TCGA-29-1711-01A-01R-1567-13 MSLN-MCRIP2 125 36 chr16:761174:+ chr16:647417:+ . NA TCGA-29-1711-01A-01R-1567-13 NSRP1-SLC6A13 46 7 chr17:30116863:+ chr12:238010:- FRAMESHIFT NA TCGA-29-1711-01A-01R-1567-13 CUL5-ELMOD1 19 4 chr11:108054955:+ chr11:107647468:+ INFRAME NA TCGA-29-1711-01A-01R-1567-13 TMEM79-SMG5 19 0 chr1:156285755:+ chr1:156249279:- . NA TCGA-29-1711-01A-01R-1567-13 PRPF6-DCAF5 11 5 chr20:63985025:+ chr14:69062511:- FRAMESHIFT NA TCGA-29-1711-01A-01R-1567-13 TANC1-RINL 10 2 chr2:159097834:+ chr19:38871870:- INFRAME NA TCGA-29-1711-01A-01R-1567-13 SMG1-LRRK1 6 1 chr16:18896052:- chr15:100988634:+ INFRAME NA TCGA-29-1711-01A-01R-1567-13 GPRIN2-TIMM23 5 2 chr10:46554585:- chr10:45988737:+ . NA TCGA-29-1761-01A-01R-1567-13 OTUD5-PCSK1N 44 0 chrX:48934464:- chrX:48832341:- INFRAME NA TCGA-29-1761-01A-01R-1567-13 SGPL1-COL13A1 24 0 chr10:70857690:+ chr10:69895550:+ INFRAME NA TCGA-29-1761-01A-01R-1567-13 LVCAT5-EPG5 16 0 chr7:119782284:- chr18:45952643:- . NA TCGA-29-1761-01A-01R-1567-13 AP1M2-TMED1 15 0 chr19:10587190:- chr19:10833213:- INFRAME NA TCGA-29-1762-01A-01R-1567-13 SPTBN4-TDP1 284 25 chr19:40534343:+ chr14:90019316:+ FRAMESHIFT NA TCGA-29-1763-01A-02R-1567-13 PI4KB-SELENBP1 3 0 chr1:151310211:- chr1:151369769:- FRAMESHIFT NA TCGA-29-1770-01A-01R-1567-13 SLC25A32-SMYD3 15 7 chr8:103407634:- chr1:246355094:- INFRAME NA TCGA-29-1776-01A-01R-1567-13 NT5C-HN1 8 3 chr17:75131181:- chr17:75136250:- INFRAME NA TCGA-29-1778-01A-01R-1567-13 EPG5-RAB38 28 4 chr18:45887751:- chr11:88114140:- INFRAME NA TCGA-29-1778-01A-01R-1567-13 USP6NL-AHCY 23 3 chr10:11597631:- chr20:34295585:- INFRAME NA TCGA-29-1778-01A-01R-1567-13 GTPBP2-VEGFA 22 1 chr6:43624510:- chr6:43784541:+ INFRAME NA TCGA-29-1778-01A-01R-1567-13 ZBTB20-RERE 16 3 chr3:114900304:- chr1:8614686:- . NA TCGA-29-1778-01A-01R-1567-13 TMEM165-DACH1 16 0 chr4:55424643:+ chr13:71489148:- INFRAME NA TCGA-29-1778-01A-01R-1567-13 CAP1-NARS2 11 0 chr1:40060170:+ chr11:78443758:- INFRAME NA TCGA-29-1778-01A-01R-1567-13 MACF1-LSAMP 11 0 chr1:39382152:+ chr3:116444955:- FRAMESHIFT NA TCGA-29-1781-01A-01R-1567-13 DOK5-SLC2A1 41 1 chr20:54476012:+ chr1:42943321:- INFRAME NA TCGA-29-1781-01A-01R-1567-13 UBA3-LMOD3 33 3 chr3:69071535:- chr3:69109121:- FRAMESHIFT NA TCGA-29-1781-01A-01R-1567-13 TPD52L1-NKAIN2 27 2 chr6:125220193:+ chr6:124791339:+ INFRAME NA TCGA-29-1781-01A-01R-1567-13 TEX2-POLG2 22 1 chr17:64212574:- chr17:64485868:- INFRAME NA TCGA-29-1781-01A-01R-1567-13 MECOM-LRRC31 16 0 chr3:169663336:- chr3:169869872:- . NA TCGA-29-1783-01A-01R-1567-13 R3HDM4-PLEKHA4 97 103 chr19:913087:- chr19:48841310:- FRAMESHIFT NA TCGA-29-1783-01A-01R-1567-13 ADNP-KCNG1 52 38 chr20:50930826:- chr20:51012416:- . NA TCGA-29-1783-01A-01R-1567-13 HSD17B14-SAFB 17 4 chr19:48834276:- chr19:5661558:+ INFRAME NA TCGA-29-1783-01A-01R-1567-13 UBXN6-GRM4 9 4 chr19:4452364:- chr6:34040748:- FRAMESHIFT NA TCGA-29-1783-01A-01R-1567-13 SMYD2-KCNK2 7 7 chr1:214281427:+ chr1:215086368:+ FRAMESHIFT NA TCGA-29-1784-01A-02R-1567-13 FLOT2-SUPT6H 37 4 chr17:28897526:- chr17:28686339:+ FRAMESHIFT NA TCGA-29-1784-01A-02R-1567-13 NSD1-NCKIPSD 11 2 chr5:177136030:+ chr3:48680229:- INFRAME Likely Oncogenic NA TCGA-29-1785-01A-01R-1567-13 VTCN1-PTGFRN 105 24 chr1:117210824:- chr1:116941715:+ FRAMESHIFT NA TCGA-29-1785-01A-01R-1567-13 SPG20-SOHLH2 39 14 chr13:36346225:- chr13:36202093:- . NA TCGA-29-1785-01A-01R-1567-13 TULP3-ITFG2 27 3 chr12:2877282:+ chr12:2822794:+ . NA TCGA-29-1785-01A-01R-1567-13 EFTUD2-PLCD3 23 7 chr17:44852409:- chr17:45120414:- INFRAME NA TCGA-29-1785-01A-01R-1567-13 EPB41L1-DEFB123 10 2 chr20:36222394:+ chr20:31450029:+ FRAMESHIFT NA TCGA-29-2427-01A-01R-1569-13 PCMTD1-KLHDC8A 51 14 chr8:51898930:- chr1:205343793:- . NA TCGA-29-2427-01A-01R-1569-13 COASY-HSD17B1 12 0 chr17:42562288:+ chr17:42552883:+ . NA TCGA-29-A5NZ-01A-11R-A406-31 PHACTR4-LRRC42 54 25 chr1:28407463:+ chr1:53960356:+ FRAMESHIFT NA TCGA-29-A5NZ-01A-11R-A406-31 DCAF5-RAD51B 52 12 chr14:69091674:- chr14:68468172:+ INFRAME NA TCGA-29-A5NZ-01A-11R-A406-31 FRAS1-MGST2 49 15 chr4:78400887:+ chr4:139695197:+ FRAMESHIFT NA TCGA-29-A5NZ-01A-11R-A406-31 CLN3-SIVA1 22 13 chr16:28486347:- chr14:104759219:+ . NA TCGA-29-A5NZ-01A-11R-A406-31 PIK3C2B-C1orf116 25 1 chr1:204464012:- chr1:207027679:- . NA TCGA-29-A5NZ-01A-11R-A406-31 HNRNPF-ZNF33B 19 8 chr10:43396456:- chr10:42632439:- . NA TCGA-29-A5NZ-01A-11R-A406-31 ELMSAN1-VSX2 16 7 chr14:73787102:- chr14:74241182:+ . NA TCGA-29-A5NZ-01A-11R-A406-31 SPECC1L-XPNPEP3 15 8 chr22:24313466:+ chr22:40922333:+ FRAMESHIFT NA TCGA-29-A5NZ-01A-11R-A406-31 SIVA1-PTBP1P 15 7 chr14:104753319:+ chr14:65279347:+ . NA TCGA-29-A5NZ-01A-11R-A406-31 JDP2-PLEKHH1 14 5 chr14:75438121:+ chr14:67541834:+ . NA TCGA-29-A5NZ-01A-11R-A406-31 DCAF4-IFT140 11 4 chr14:72938066:+ chr16:1526800:- . NA TCGA-29-A5NZ-01A-11R-A406-31 MOCS1-LEMD3 11 3 chr6:39925678:- chr12:65238502:+ FRAMESHIFT NA TCGA-29-A5NZ-01A-11R-A406-31 EPHB2-MAST2 10 6 chr1:22711043:+ chr1:46002805:+ FRAMESHIFT NA TCGA-30-1718-01A-01R-1567-13 FAM32A-TPM4 118 34 chr19:16185765:+ chr19:16076047:+ INFRAME NA TCGA-30-1718-01A-01R-1567-13 UBE2K-ENOPH1 113 15 chr4:39755739:+ chr4:82454722:+ INFRAME NA TCGA-30-1718-01A-01R-1567-13 USP6NL-SVBP 25 1 chr10:11597631:- chr1:42816580:- . NA TCGA-30-1718-01A-01R-1567-13 HDAC1-LCK 24 1 chr1:32316782:+ chr1:32274325:+ INFRAME NA TCGA-30-1718-01A-01R-1567-13 VAPA-SLC28A3 12 3 chr18:9914335:+ chr9:84313454:- FRAMESHIFT NA TCGA-30-1718-01A-01R-1567-13 ANXA11-MAT1A 12 0 chr10:80205343:- chr10:80289678:- . NA TCGA-30-1718-01A-01R-1567-13 GTF2I-EIF4H 11 3 chr7:74716950:+ chr7:74189673:+ INFRAME NA TCGA-30-1718-01A-01R-1567-13 CLIC4-UBAP2L 11 0 chr1:24745625:+ chr1:154254836:+ INFRAME NA TCGA-30-1718-01A-01R-1567-13 MUC16-ZSWIM4 6 5 chr19:8902098:- chr19:13825550:+ FRAMESHIFT NA TCGA-30-1855-01A-01R-1567-13 GGA3-NUP85 34 4 chr17:75261548:- chr17:75234637:+ INFRAME NA TCGA-30-1862-01A-02R-1568-13 TGFA-FAM136A 7 2 chr2:70514859:- chr2:70300980:- INFRAME NA TCGA-30-1862-01A-02R-1568-13 ARID1A-FAM76A 6 3 chr1:26697540:+ chr1:27727472:+ INFRAME Likely Oncogenic NA TCGA-30-1891-01A-01R-1568-13 FOXJ3-PGM1 50 3 chr1:42199102:- chr1:63629425:+ INFRAME NA TCGA-31-1953-01A-01R-1568-13 RAB7A-CHCHD6 76 11 chr3:128726359:+ chr3:126852647:+ . NA TCGA-31-1953-01A-01R-1568-13 ASXL1-HCK 27 9 chr20:32358832:+ chr20:32071662:+ INFRAME Likely Oncogenic NA TCGA-31-1953-01A-01R-1568-13 DVL1-ITPA 16 13 chr1:1337977:- chr20:3221841:+ FRAMESHIFT NA TCGA-31-1953-01A-01R-1568-13 LTBR-ITFG2 12 3 chr12:6385379:+ chr12:2817223:+ FRAMESHIFT NA TCGA-31-1953-01A-01R-1568-13 STAMBP-SPR 8 3 chr2:73831059:+ chr2:72888314:+ FRAMESHIFT NA TCGA-31-1953-01A-01R-1568-13 SRPK2-PUS7 2 0 chr7:105388648:- chr7:105459259:- INFRAME NA TCGA-3P-A9WA-01A-11R-A406-31 RARA-CDK12 48 24 chr17:40348464:+ chr17:39530604:+ FRAMESHIFT Likely Oncogenic NA TCGA-3P-A9WA-01A-11R-A406-31 KIAA0232-MAN2B2 41 11 chr4:6876757:+ chr4:6609107:+ FRAMESHIFT NA TCGA-3P-A9WA-01A-11R-A406-31 STX18-LYAR 25 6 chr4:4438394:- chr4:4286572:- . NA TCGA-3P-A9WA-01A-11R-A406-31 WIPF2-CDK12 14 2 chr17:40265146:+ chr17:39564760:+ . Likely Oncogenic NA TCGA-57-1993-01A-01R-1568-13 SPTAN1-TBC1D13 75 23 chr9:128568897:+ chr9:128803250:+ INFRAME NA TCGA-57-1993-01A-01R-1568-13 FASTKD5-LZTS3 35 45 chr20:3159766:- chr20:3167961:- . NA TCGA-57-1993-01A-01R-1568-13 UBOX5-LZTS3 35 45 chr20:3159766:- chr20:3167961:- . NA TCGA-57-1993-01A-01R-1568-13 EIF3M-CSTF3 15 26 chr11:32583929:+ chr11:33141986:- INFRAME NA TCGA-57-1993-01A-01R-1568-13 CPNE2-YWHAEP7 18 7 chr16:57127903:+ chr17:37828964:- . NA TCGA-57-1993-01A-01R-1568-13 INTS4-NARS2 15 4 chr11:77955942:- chr11:78466013:- INFRAME NA TCGA-57-1993-01A-01R-1568-13 KIAA0753-HSBP1L1 11 3 chr17:6640637:- chr18:79970440:+ . NA TCGA-57-1993-01A-01R-1568-13 RASSF8-LRMP 9 5 chr12:25995130:+ chr12:25011371:+ . NA TCGA-57-1993-01A-01R-1568-13 MYL12A-MYOM1 9 1 chr18:3254050:+ chr18:3219878:- . NA TCGA-57-1993-01A-01R-1568-13 LPIN2-COPS3 3 5 chr18:3013087:- chr17:17249039:- . NA TCGA-57-1994-01A-01R-1568-13 DVL3-ECE2 38 9 chr3:184168065:+ chr3:184292062:+ FRAMESHIFT NA TCGA-57-1994-01A-01R-1568-13 NOTCH3-HOXD11 11 10 chr19:15192048:- chr2:176104557:+ . NA TCGA-57-1994-01A-01R-1568-13 NOTCH3-HOXD10 9 3 chr19:15197500:- chr2:176108907:+ . NA TCGA-57-1994-01A-01R-1568-13 SPINT2-TYROBP 4 7 chr19:38264998:+ chr19:35907580:- INFRAME NA TCGA-59-2348-01A-01R-1569-13 ZNF83-TARM1 254 38 chr19:52655561:- chr19:54070160:- . NA TCGA-59-2348-01A-01R-1569-13 SLC48A1-HECA 30 4 chr12:47773440:+ chr6:139166284:+ INFRAME NA TCGA-59-2348-01A-01R-1569-13 FAM118A-NUP50 17 3 chr22:45310183:+ chr22:45181286:+ . NA TCGA-59-2348-01A-01R-1569-13 PTPN2-FOXA1 17 3 chr18:12884073:- chr14:37592711:- INFRAME NA TCGA-59-2348-01A-01R-1569-13 ANKRD28-TBC1D5 14 3 chr3:15677517:- chr3:17160486:- . NA TCGA-59-2348-01A-01R-1569-13 RRP36-PPP2R5D 12 1 chr6:43021784:+ chr6:43006463:+ FRAMESHIFT NA TCGA-59-2348-01A-01R-1569-13 PFKFB2-GDAP1L1 12 0 chr1:207065160:+ chr20:44263230:+ FRAMESHIFT NA TCGA-59-2348-01A-01R-1569-13 SLC38A2-C12orf4 10 5 chr12:46364389:- chr12:4525583:- FRAMESHIFT NA TCGA-59-2348-01A-01R-1569-13 POR-MDH2 11 0 chr7:75915179:+ chr7:76054830:+ . NA TCGA-59-2351-01A-01R-1569-13 SMAD3-MAP2K1 21 9 chr15:67066360:+ chr15:66435027:+ INFRAME Likely Oncogenic NA TCGA-59-2352-01A-01R-1569-13 SEC31A-SCD5 69 4 chr4:82891088:- chr4:82636823:- FRAMESHIFT NA TCGA-59-2352-01A-01R-1569-13 PAFAH1B1-NTN1 16 4 chr17:2594006:+ chr17:9162813:+ . NA TCGA-59-2352-01A-01R-1569-13 UBE2G1-MFSD1P1 9 1 chr17:4296717:- chr17:4302202:+ . NA TCGA-59-2355-01A-01R-1569-13 PSMB2-C1orf94 549 70 chr1:35631274:- chr1:34208157:+ INFRAME NA TCGA-59-2363-01A-01R-1569-13 HOMER2-TM6SF1 42 10 chr15:82952531:- chr15:83112797:+ INFRAME NA TCGA-59-2363-01A-01R-1569-13 SPAG1-POLR2K 22 5 chr8:100158118:+ chr8:100151347:+ . NA TCGA-59-2363-01A-01R-1569-13 MAST4-PPWD1 22 1 chr5:67090231:+ chr5:65567513:+ FRAMESHIFT NA TCGA-59-2363-01A-01R-1569-13 ALDOA-PANK2 9 0 chr16:30068536:+ chr20:3929347:+ . NA TCGA-59-2363-01A-01R-1569-13 AHNAK-EEF1G 7 2 chr11:62533661:- chr11:62560454:- FRAMESHIFT NA TCGA-59-2363-01A-01R-1569-13 EXT1-PTK2 6 2 chr8:117804722:- chr8:140764290:- FRAMESHIFT NA TCGA-59-A5PD-01A-11R-A406-31 SEL1L-MIOS 92 14 chr14:81533675:- chr7:7585636:+ INFRAME NA TCGA-59-A5PD-01A-11R-A406-31 TBC1D1-NMU 37 6 chr4:38054338:+ chr4:55600575:- FRAMESHIFT NA TCGA-59-A5PD-01A-11R-A406-31 TLK1-ADK 18 18 chr2:171082781:- chr10:74670183:+ FRAMESHIFT NA TCGA-59-A5PD-01A-11R-A406-31 KIF3C-ADCY3 14 13 chr2:25980373:- chr2:24872719:- INFRAME NA TCGA-5X-AA5U-01A-11R-A406-31 BCAT1-SLCO1A2 37 10 chr12:24829823:- chr12:21334704:- . NA TCGA-5X-AA5U-01A-11R-A406-31 SIPA1L3-ERC1 26 4 chr19:38088851:+ chr12:1083164:+ INFRAME NA TCGA-5X-AA5U-01A-11R-A406-31 PIGN-TMEM241 19 6 chr18:62161133:- chr18:23421444:- INFRAME NA TCGA-5X-AA5U-01A-11R-A406-31 BICD1-CYP2F2P 18 0 chr12:32107544:+ chr19:40818899:- . NA TCGA-5X-AA5U-01A-11R-A406-31 SARS2-SIPA1L3 13 6 chr19:38926205:- chr19:38029089:+ . NA TCGA-61-1725-01A-01R-1567-13 TMEM87B-MERTK 22 0 chr2:112064253:+ chr2:112019413:+ INFRAME NA TCGA-61-1728-01A-01R-1568-13 CPNE2-FAM192A 111 5 chr16:57092790:+ chr16:57164065:- . NA TCGA-61-1728-01A-01R-1568-13 DAB2IP-SLC44A4 94 16 chr9:121770724:+ chr6:31869637:- INFRAME NA TCGA-61-1728-01A-01R-1568-13 MYO9B-ZNF430 64 11 chr19:17075874:+ chr19:21056631:+ . NA TCGA-61-1728-01A-01R-1568-13 MED26-SLC1A6 48 8 chr19:16627872:- chr19:14972917:- INFRAME NA TCGA-61-1728-01A-01R-1568-13 AURKA-SOGA1 45 5 chr20:56381433:- chr20:36817469:- INFRAME NA TCGA-61-1728-01A-01R-1568-13 CYSTM1-MATR3 20 13 chr5:140175285:+ chr5:139318908:+ . NA TCGA-61-1728-01A-01R-1568-13 TRIM29-CBL 17 9 chr11:120118223:- chr11:119313418:+ INFRAME Likely Oncogenic NA TCGA-61-1728-01A-01R-1568-13 ZFHX3-DLG2 15 3 chr16:73058530:- chr11:84534731:- . NA TCGA-61-1733-01A-01R-1567-13 EHMT1-ATP13A1 18 1 chr9:137717182:+ chr19:19659987:- INFRAME NA TCGA-61-1733-01A-01R-1567-13 PELP1-CAMTA2 17 0 chr17:4674510:- chr17:4974500:- INFRAME NA TCGA-61-1733-01A-01R-1567-13 C10orf11-PLEKHG6 13 0 chr10:75438494:+ chr12:6312159:+ . NA TCGA-61-1736-01B-01R-1568-13 SSX2IP-LPAR3 93 34 chr1:84690154:- chr1:84814171:- . NA TCGA-61-1736-01B-01R-1568-13 ZMPSTE24-CAP1 89 12 chr1:40272035:+ chr1:40069690:+ INFRAME NA TCGA-61-1736-01B-01R-1568-13 YY1AP1-ARHGEF2 15 5 chr1:155668627:- chr1:155969300:- INFRAME NA TCGA-61-1736-01B-01R-1568-13 GRB7-CDK12 10 1 chr17:39738133:+ chr17:39564760:+ . Likely Oncogenic NA TCGA-61-1738-01A-01R-1567-13 UBE2D2-PAIP2 538 69 chr5:139526612:+ chr5:139363759:+ . NA TCGA-61-1738-01A-01R-1567-13 GDF15-MAST3 95 16 chr19:18386466:+ chr19:18149191:+ INFRAME NA TCGA-61-1738-01A-01R-1567-13 NCOA6-SLC10A1 75 14 chr20:34825472:- chr14:69786307:- . NA TCGA-61-1738-01A-01R-1567-13 SUMO2-POLR2K 25 6 chr17:75182814:- chr8:100151347:+ . NA TCGA-61-1738-01A-01R-1567-13 AHDC1-IFI6 25 0 chr1:27547261:- chr1:27666475:- . NA TCGA-61-1738-01A-01R-1567-13 ISM2-SPTLC2 18 6 chr14:77498653:- chr14:77597380:- INFRAME NA TCGA-61-1738-01A-01R-1567-13 GATSL2-GTF2IRD1 16 2 chr7:75020149:+ chr7:74555174:+ INFRAME NA TCGA-61-1738-01A-01R-1567-13 DNM2-PDE4A 13 3 chr19:10718403:+ chr19:10446218:+ INFRAME NA TCGA-61-1738-01A-01R-1567-13 FOSL2-SNX17 13 3 chr2:28393822:+ chr2:27371269:+ INFRAME NA TCGA-61-1738-01A-01R-1567-13 CCSER2-GHITM 10 2 chr10:84328808:+ chr10:84150709:+ . NA TCGA-61-1738-01A-01R-1567-13 FHOD1-PIK3CD-AS2 9 6 chr16:67239348:- chr1:9681135:- . NA TCGA-61-1738-01A-01R-1567-13 CTCF-SPSB1 9 5 chr16:67621591:+ chr1:9355743:+ . Likely Oncogenic NA TCGA-61-1738-01A-01R-1567-13 EXOC7-ACHE 6 2 chr17:76087654:- chr7:100894255:- . NA TCGA-61-1738-01A-01R-1567-13 ABCC3-KAT7 4 4 chr17:50634981:+ chr17:49815803:+ INFRAME NA TCGA-61-1740-01A-01R-1567-13 XPR1-AHNAK 492 107 chr1:180632270:+ chr11:62491831:- INFRAME NA TCGA-61-1740-01A-01R-1567-13 FDXACB1-CRYAB 89 35 chr11:111878961:- chr11:111911922:- . NA TCGA-61-1740-01A-01R-1567-13 C11orf52-C11orf1 50 7 chr11:111919004:+ chr11:111882368:+ FRAMESHIFT NA TCGA-61-1740-01A-01R-1567-13 YME1L1-ZNF438 31 16 chr10:27148906:- chr10:30909015:- . NA TCGA-61-1740-01A-01R-1567-13 SFXN5-M1AP 27 7 chr2:72998949:- chr2:74562423:- INFRAME NA TCGA-61-1740-01A-01R-1567-13 PRKD2-HPSE2 22 6 chr19:46678396:- chr10:98490196:- FRAMESHIFT NA TCGA-61-1740-01A-01R-1567-13 EML2-FBXO46 15 7 chr19:45617630:- chr19:45713573:- . NA TCGA-61-1740-01A-01R-1567-13 EP300-CARD8 12 5 chr22:41093098:+ chr19:48215384:- INFRAME Likely Oncogenic NA TCGA-61-1740-01A-01R-1567-13 MPP5-SRGAP2 10 8 chr14:67241533:+ chr1:206450386:+ . NA TCGA-61-1740-01A-01R-1567-13 SRPK2-PUS7 7 1 chr7:105388648:- chr7:105462750:- FRAMESHIFT NA TCGA-61-1741-01A-02R-1567-13 USF2-P3H2 12 2 chr19:35271141:+ chr3:189995442:- FRAMESHIFT NA TCGA-61-1741-01A-02R-1567-13 UQCC1-MMP24 9 3 chr20:35306666:- chr20:35246840:+ INFRAME NA TCGA-61-1907-01A-01R-1567-13 NMRAL1-PRKCB 16 6 chr16:4466153:- chr16:24219961:+ FRAMESHIFT NA TCGA-61-1910-01A-01R-1567-13 DNAJC7-GHDC 44 2 chr17:42017340:- chr17:42193850:- . NA TCGA-61-1910-01A-01R-1567-13 KCNC3-NAPSA 23 3 chr19:50328213:- chr19:50362313:- FRAMESHIFT NA TCGA-61-1910-01A-01R-1567-13 CTDSPL2-CASC4 22 1 chr15:44459200:+ chr15:44413336:+ FRAMESHIFT NA TCGA-61-1910-01A-01R-1567-13 ATAT1-HCG20 11 0 chr6:30628430:+ chr6:30788691:+ . NA TCGA-61-1910-01A-01R-1567-13 CIITA-FCHSD2 7 2 chr16:10902801:+ chr11:72921950:- FRAMESHIFT NA TCGA-61-1910-01A-01R-1567-13 MROH1-PPM1E 6 1 chr8:144168440:+ chr17:58955649:+ FRAMESHIFT NA TCGA-61-1910-01A-01R-1567-13 ENDOV-RNF213 5 0 chr17:80429831:+ chr17:80388612:+ FRAMESHIFT NA TCGA-61-1910-01A-01R-1567-13 DHRS13-PHF12 3 2 chr17:28902583:- chr17:28914037:- INFRAME NA TCGA-61-1914-01A-01R-1567-13 MAP2K4-MYH3 69 13 chr17:12021001:+ chr17:10635853:- INFRAME Likely Oncogenic NA TCGA-61-1919-01A-01R-1568-13 MARK3-GLIS3 18 0 chr14:103428440:+ chr9:3856184:- FRAMESHIFT NA TCGA-61-1919-01A-01R-1568-13 ZC3H12C-VPS52 6 1 chr11:110137414:+ chr6:33264900:- FRAMESHIFT NA TCGA-61-1998-01A-01R-1568-13 CARD19-TMOD1 14 2 chr9:93107827:+ chr9:97524141:+ . NA TCGA-61-1998-01A-01R-1568-13 WNK2-SH2B2 11 1 chr9:93247834:+ chr7:102314336:+ FRAMESHIFT NA TCGA-61-1998-01A-01R-1568-13 JKAMP-DAAM1 10 1 chr14:59486804:+ chr14:59340074:+ INFRAME NA TCGA-61-1998-01A-01R-1568-13 SLC1A3-FYB 8 0 chr5:36608604:+ chr5:39110389:- INFRAME NA TCGA-61-2000-01A-01R-1568-13 PLEKHA7-SERGEF 62 9 chr11:17013989:- chr11:17788413:- FRAMESHIFT NA TCGA-61-2000-01A-01R-1568-13 FKBP8-MEF2B 38 4 chr19:18538216:- chr19:19147832:- FRAMESHIFT NA TCGA-61-2000-01A-01R-1568-13 EXO1-WDR64 32 0 chr1:241850586:+ chr1:241787849:+ INFRAME NA TCGA-61-2000-01A-01R-1568-13 RNF135-RAB11FIP4 27 3 chr17:30971445:+ chr17:31517651:+ INFRAME NA TCGA-61-2000-01A-01R-1568-13 BIRC6-BRE 17 3 chr2:32357486:+ chr2:28129271:+ FRAMESHIFT NA TCGA-61-2000-01A-01R-1568-13 HBP1-LHFPL3 10 1 chr7:107169027:+ chr7:104736675:+ . NA TCGA-61-2009-01A-01R-1568-13 GORASP2-GAD1 102 8 chr2:170948430:+ chr2:170847676:+ INFRAME NA TCGA-61-2012-01A-01R-1568-13 UBA2-ZNF536 24 7 chr19:34450364:+ chr19:30710757:+ INFRAME NA TCGA-61-2012-01A-01R-1568-13 PUM1-ADGRB2 11 2 chr1:31059204:- chr1:31756815:- INFRAME NA TCGA-61-2012-01A-01R-1568-13 PAFAH1B1-VPS53 8 1 chr17:2638320:+ chr17:601896:- FRAMESHIFT NA TCGA-61-2012-01A-01R-1568-13 PRMT1-CCDC155 8 0 chr19:49682259:+ chr19:49406886:+ FRAMESHIFT NA TCGA-61-2012-01A-01R-1568-13 PAK1-ZNF595 6 3 chr11:77473552:- chr4:59430:+ . NA TCGA-61-2016-01A-01R-1568-13 FXR1-ST6GAL1 32 0 chr3:180912736:+ chr3:187038742:+ . NA TCGA-61-2088-01A-01R-1568-13 BTBD9-SUPT3H 27 2 chr6:38577600:- chr6:44829857:- FRAMESHIFT NA TCGA-61-2088-01A-01R-1568-13 NUDT3-MOCS1 24 3 chr6:34341862:- chr6:39916232:- FRAMESHIFT NA TCGA-61-2088-01A-01R-1568-13 SLX4IP-DEFB126 20 6 chr20:10458231:+ chr20:145415:+ FRAMESHIFT NA TCGA-61-2088-01A-01R-1568-13 DNASE2-GADD45GIP1 12 0 chr19:12878382:- chr19:12954526:- FRAMESHIFT NA TCGA-61-2092-01A-01R-1568-13 MED24-TMED10 97 35 chr17:40053298:- chr14:75135886:- INFRAME NA TCGA-61-2092-01A-01R-1568-13 RC3H2-NRF1 93 22 chr9:122892909:- chr7:129630078:+ . NA TCGA-61-2092-01A-01R-1568-13 DCAF5-NOXRED1 67 27 chr14:69062384:- chr14:77394805:- FRAMESHIFT NA TCGA-61-2092-01A-01R-1568-13 NDUFA13-NCAN 16 3 chr19:19526260:+ chr19:19226486:+ FRAMESHIFT NA TCGA-61-2092-01A-01R-1568-13 DNM2-SBNO2 16 2 chr19:10759811:+ chr19:1149442:- FRAMESHIFT NA TCGA-61-2092-01A-01R-1568-13 CYTH3-ATP8B3 11 2 chr7:6272474:- chr19:1802645:- INFRAME NA TCGA-61-2092-01A-01R-1568-13 RBFOX2-TEX33 11 1 chr22:35809780:- chr22:37004025:- . NA TCGA-61-2092-01A-01R-1568-13 ERC2-ARHGEF3 9 2 chr3:56468248:- chr3:56958889:- . NA TCGA-61-2092-01A-01R-1568-13 TP53BP2-GRHL2 9 2 chr1:223814240:- chr8:101619539:+ INFRAME NA TCGA-61-2092-01A-01R-1568-13 CLPX-PARP16 8 1 chr15:65148548:- chr15:65259397:- . NA TCGA-61-2092-01A-01R-1568-13 RBMS2-ERBB3 7 4 chr12:56522089:+ chr12:56083751:+ FRAMESHIFT NA TCGA-61-2092-01A-01R-1568-13 FBXL20-IKZF3 7 1 chr17:39343180:- chr17:39788374:- FRAMESHIFT NA TCGA-61-2094-01A-01R-1568-13 SORL1-TBCEL 66 14 chr11:121478243:+ chr11:121086778:+ FRAMESHIFT NA TCGA-61-2094-01A-01R-1568-13 FAM98C-SPINT2 18 5 chr19:38403694:+ chr19:38283627:+ INFRAME NA TCGA-61-2102-01A-01R-1568-13 EPS8-PLEKHA5 217 59 chr12:15789161:- chr12:19336515:+ . NA TCGA-61-2102-01A-01R-1568-13 MYO9B-ATP13A1 20 18 chr19:17102557:+ chr19:19647528:- INFRAME NA TCGA-61-2102-01A-01R-1568-13 FBRSL1-GALNT9 12 6 chr12:132490861:+ chr12:132286430:- FRAMESHIFT NA TCGA-61-2102-01A-01R-1568-13 FAM135A-LMO3 11 5 chr6:70502791:+ chr12:16560538:- INFRAME NA TCGA-61-2102-01A-01R-1568-13 VPS41-VOPP1 10 4 chr7:38862545:- chr7:55497690:- FRAMESHIFT NA TCGA-61-2102-01A-01R-1568-13 PLEKHA5-SLCO1B1 5 5 chr12:19132450:+ chr12:21172650:+ FRAMESHIFT NA TCGA-61-2102-01A-01R-1568-13 HOOK1-FGGY 5 1 chr1:59835412:+ chr1:59607803:+ INFRAME NA TCGA-61-2104-01A-01R-1568-13 SPEN-TMEM51 20 16 chr1:15876678:+ chr1:15210490:+ . Likely Oncogenic NA TCGA-61-2104-01A-01R-1568-13 THRAP3-INSL5 17 5 chr1:36224505:+ chr1:66801166:- . NA TCGA-61-2104-01A-01R-1568-13 MACROD1-TBC1D22A 14 3 chr11:64151239:- chr22:46878653:+ INFRAME NA TCGA-61-2104-01A-01R-1568-13 TBCD-FN3K 11 2 chr17:82752328:+ chr17:82740842:+ INFRAME NA TCGA-61-2104-01A-01R-1568-13 FBXO31-TTC28 9 4 chr16:87360295:- chr22:28163599:- FRAMESHIFT NA TCGA-61-2104-01A-01R-1568-13 SGSM3-PLAUR 10 0 chr22:40370688:+ chr19:43656640:- . NA TCGA-61-2104-01A-01R-1568-13 FAM69A-TGFBR3 9 1 chr1:92961376:- chr1:91899697:- . NA TCGA-61-2109-01A-01R-1568-13 UBAP2-C15orf41 18 8 chr9:33923186:- chr15:36808324:+ FRAMESHIFT NA TCGA-61-2109-01A-01R-1568-13 TOP3B-MAPK1 13 3 chr22:21974357:- chr22:21807846:- FRAMESHIFT NA TCGA-61-2109-01A-01R-1568-13 AXIN1-BBX 11 6 chr16:346148:- chr3:107747965:+ FRAMESHIFT Likely Oncogenic NA TCGA-61-2109-01A-01R-1568-13 VPS13C-ENKD1 6 5 chr15:61929501:- chr16:67664062:- FRAMESHIFT NA TCGA-61-2110-01A-01R-1568-13 STAG1-ZNF148 14 0 chr3:136752195:- chr3:125234329:- . NA TCGA-61-2111-01A-01R-1568-13 CPD-MYL4 40 9 chr17:30385236:+ chr17:47209389:+ . NA TCGA-61-2111-01A-01R-1568-13 ZC3H7B-SLC9A8 38 10 chr22:41346208:+ chr20:49887829:+ INFRAME NA TCGA-61-2111-01A-01R-1568-13 ADSL-PVALB 35 9 chr22:40346711:+ chr22:36800918:- FRAMESHIFT NA TCGA-61-2111-01A-01R-1568-13 PTPRF-PHF20 19 7 chr1:43578920:+ chr20:35899370:+ INFRAME NA TCGA-61-2111-01A-01R-1568-13 AMDHD2-COG7 10 3 chr16:2521123:+ chr16:23398129:- INFRAME NA TCGA-61-2111-01A-01R-1568-13 TMEM170B-ADTRP 10 2 chr6:11538374:+ chr6:11723500:- FRAMESHIFT NA TCGA-61-2111-01A-01R-1568-13 RBL1-CSTA 10 0 chr20:37088989:- chr3:122337547:+ FRAMESHIFT NA TCGA-61-2111-01A-01R-1568-13 SSBP3-TOX2 8 3 chr1:54401861:- chr20:44051306:+ INFRAME NA TCGA-61-2111-01A-01R-1568-13 SNN-LITAF 7 6 chr16:11668540:+ chr16:11556735:- . NA TCGA-61-2111-01A-01R-1568-13 IGF2BP3-P2RY14 6 1 chr7:23317639:- chr3:151219642:- . NA TCGA-61-2111-01A-01R-1568-13 PKDCC-CXXC5 5 4 chr2:42057397:+ chr5:139682880:+ . NA TCGA-61-2111-01A-01R-1568-13 ACTR3-POLR1B 5 3 chr2:113890323:+ chr2:112559293:+ FRAMESHIFT NA TCGA-61-2111-01A-01R-1568-13 FARP1-ABCC2 5 2 chr13:98143492:+ chr10:99807384:+ . NA TCGA-61-2111-01A-01R-1568-13 GRHL2-FLJ42969 4 6 chr8:101649499:+ chr8:101054498:+ . NA TCGA-61-2111-01A-01R-1568-13 CBWD1-INSL6 5 1 chr9:175698:- chr9:5164265:- INFRAME NA TCGA-61-2111-01A-01R-1568-13 TRA2B-NMRAL2P 5 1 chr3:185937825:- chr3:185971615:+ . NA TCGA-61-2111-01A-01R-1568-13 HECTD4-ZRSR1 4 2 chr12:112265175:- chr5:112891603:+ . NA TCGA-61-2113-01A-01R-1568-13 TNRC6B-MKL1 9 4 chr22:40178140:+ chr22:40594735:- . NA TCGA-61-2113-01A-01R-1568-13 NPAS3-ARHGAP5 7 5 chr14:32935003:+ chr14:32117143:+ FRAMESHIFT NA TCGA-OY-A56P-01A-12R-A406-31 SAFB-RFX2 39 11 chr19:5626489:+ chr19:6047504:- . NA TCGA-OY-A56P-01A-12R-A406-31 ETNK1-MYO9B 35 18 chr12:22625586:+ chr19:17187935:+ INFRAME NA TCGA-OY-A56P-01A-12R-A406-31 ANO6-PKP2 14 4 chr12:45378113:+ chr12:32802556:- FRAMESHIFT NA TCGA-OY-A56P-01A-12R-A406-31 SOGA1-GPI 14 2 chr20:36793249:- chr19:34393248:+ INFRAME NA TCGA-OY-A56P-01A-12R-A406-31 HECTD4-HSPB8 9 8 chr12:112190786:- chr12:119187025:+ INFRAME NA TCGA-OY-A56P-01A-12R-A406-31 SBNO1-DDX55 8 7 chr12:123304582:- chr12:123615185:+ FRAMESHIFT NA TCGA-OY-A56Q-01A-11R-A406-31 PPP1R37-CEACAM19 283 129 chr19:45093527:+ chr19:44682567:+ FRAMESHIFT NA TCGA-OY-A56Q-01A-11R-A406-31 PPP6R3-RACK1 55 14 chr11:68519651:+ chr5:181238239:- . NA TCGA-WR-A838-01A-12R-A406-31 CIAO1-TMEM127 114 27 chr2:96266489:+ chr2:96254997:- INFRAME NA TCGA-WR-A838-01A-12R-A406-31 POLB-ASH2L 12 1 chr8:42369988:+ chr8:38119270:+ INFRAME NA TCGA-2J-AAB4-01A-12R-A41B-07 ROCK1-CHST9 3 5 chr18:20959840:- chr18:27142905:- . NA TCGA-2J-AAB4-01A-12R-A41B-07 KMT2D-PTPRR 2 5 chr12:49059613:- chr12:70764778:- . Likely Oncogenic NA TCGA-2J-AABF-01A-31R-A41B-07 GNG12-SPATA6 2 12 chr1:67777458:- chr1:48385349:- . NA TCGA-2J-AABH-01A-21R-A41B-07 TRAPPC9-MROH5 2 15 chr8:140221459:- chr8:141495483:- FRAMESHIFT NA TCGA-2J-AABK-01A-31R-A41B-07 ADAM15-CHD1L 15 17 chr1:155059974:+ chr1:147267426:+ INFRAME NA TCGA-2J-AABO-01A-21R-A41B-07 NUBPL-PSMA6 1 3 chr14:31599379:+ chr14:35312881:+ INFRAME NA TCGA-2J-AABO-01A-21R-A41B-07 SIPA1L3-CCDC58 1 3 chr19:38029156:+ chr3:122371800:- . NA TCGA-2J-AABP-01A-11R-A41B-07 TGFB1-TRPC6 10 21 chr19:41332128:- chr11:101872382:- . NA TCGA-2J-AABP-01A-11R-A41B-07 TRIM44-CCDC86 8 17 chr11:35685336:+ chr11:60849940:+ INFRAME NA TCGA-2J-AABP-01A-11R-A41B-07 HSPBP1-ZNF418 5 10 chr19:55277642:- chr19:57922629:- FRAMESHIFT NA TCGA-2J-AABP-01A-11R-A41B-07 COL4A1-ZNF675 1 8 chr13:110306944:- chr19:23663158:- INFRAME NA TCGA-2J-AABP-01A-11R-A41B-07 IKZF3-PNMT 2 3 chr17:39864120:- chr17:39669629:+ INFRAME NA TCGA-2J-AABP-01A-11R-A41B-07 ZNF670-CNIH3 1 5 chr1:247078594:- chr1:224680958:+ INFRAME NA TCGA-2J-AABR-01A-11R-A41B-07 ANKMY1-GPR35 2 4 chr2:240552914:- chr2:240629949:+ FRAMESHIFT NA TCGA-2J-AABT-01A-11R-A41B-07 SREBF2-C22orf42 7 15 chr22:41833358:+ chr22:32159222:- . NA TCGA-2J-AABU-01A-11R-A41B-07 UBAP2-HMGB3P23 14 11 chr9:33973183:- chr9:31645051:- . NA TCGA-2J-AABU-01A-11R-A41B-07 WBP1L-SFXN2 1 3 chr10:102810054:+ chr10:102726612:+ FRAMESHIFT NA TCGA-2J-AABV-01A-12R-A41B-07 CTRC-PRSS2 3 44 chr1:15443534:+ chr7:142773490:+ INFRAME NA TCGA-2J-AABV-01A-12R-A41B-07 PNLIP-CELA2A 1 23 chr10:116551232:+ chr1:15471990:+ INFRAME NA TCGA-2J-AABV-01A-12R-A41B-07 LINC-PINT-MNX1-AS2 1 5 chr7:130984053:- chr7:157006877:+ . NA TCGA-2J-AABV-01A-12R-A41B-07 P4HB-CELA3A 1 5 chr17:81855142:- chr1:22012450:+ INFRAME NA TCGA-2L-AAQE-01A-11R-A39D-07 DSTN-KIZ 16 31 chr20:17601045:+ chr20:21229011:+ FRAMESHIFT NA TCGA-2L-AAQE-01A-11R-A39D-07 UNC13B-FAM201A 3 12 chr9:35259050:+ chr9:38621832:+ . NA TCGA-2L-AAQE-01A-11R-A39D-07 NME2-TEX14 2 9 chr17:51170049:+ chr17:58652002:- . NA TCGA-2L-AAQE-01A-11R-A39D-07 SOCS7-PLXDC1 1 8 chr17:38377842:+ chr17:39109391:- INFRAME NA TCGA-2L-AAQI-01A-12R-A39D-07 TUSC2-RASSF1 6 19 chr3:50327954:- chr3:50332154:- FRAMESHIFT NA TCGA-2L-AAQI-01A-12R-A39D-07 TUSC3-ASAH1 1 3 chr8:15748465:+ chr8:18075587:- INFRAME NA TCGA-2L-AAQJ-01A-12R-A39D-07 MATN3-PUM2 2 4 chr2:19997134:- chr2:20263460:- INFRAME NA TCGA-3A-A9I5-01A-11R-A38C-07 ATP1B1-NRG1 31 78 chr1:169111498:+ chr8:32595828:+ INFRAME NA TCGA-3A-A9I9-01A-11R-A38C-07 STYK1-GPR162 6 11 chr12:10621876:- chr12:6825484:+ FRAMESHIFT NA TCGA-3A-A9IB-01A-21R-A39D-07 TANGO6-WWP2 1 3 chr16:68974168:+ chr16:69871804:+ FRAMESHIFT NA TCGA-3A-A9IH-01A-12R-A39D-07 SELENON-TMEM59 38 101 chr1:25812792:+ chr1:54040837:- . NA TCGA-3A-A9IH-01A-12R-A39D-07 NF2-ZMAT5 3 5 chr22:29678323:+ chr22:29742480:- FRAMESHIFT Likely Oncogenic NA TCGA-3A-A9IH-01A-12R-A39D-07 MRC2-VEZF1 1 4 chr17:62627920:+ chr17:57983393:- FRAMESHIFT NA TCGA-3A-A9IU-01A-11R-A39D-07 CCDC9-NECTIN2 1000 1000 chr19:47260839:+ chr19:44865271:+ FRAMESHIFT NA TCGA-3A-A9J0-01A-11R-A41B-07 CASZ1-SLC9A1 1 55 chr1:10693874:- chr1:27109777:- FRAMESHIFT NA TCGA-3A-A9J0-01A-11R-A41B-07 RAB2A-STMN2 5 35 chr8:60517253:+ chr8:79636802:+ INFRAME NA TCGA-3A-A9J0-01A-11R-A41B-07 STX8-RTN1 5 20 chr17:9378552:- chr14:59607492:- INFRAME NA TCGA-3A-A9J0-01A-11R-A41B-07 CDKN2A-IFNA22P 3 4 chr9:21994139:- chr9:21278427:- . Likely Oncogenic NA TCGA-3A-A9J0-01A-11R-A41B-07 ERBB2-CTTN 1 3 chr17:39715939:+ chr11:70422940:+ INFRAME NA TCGA-3E-AAAY-01A-11R-A38C-07 UBE2G2-ABCG1 12 45 chr21:44787920:- chr21:42284560:+ INFRAME NA TCGA-3E-AAAY-01A-11R-A38C-07 WRB-ERG 5 15 chr21:39380486:+ chr21:38445621:- INFRAME Likely Oncogenic NA TCGA-3E-AAAY-01A-11R-A38C-07 ABCG1-BTG3 1 7 chr21:42225914:+ chr21:17609152:- . NA TCGA-3E-AAAY-01A-11R-A38C-07 BRWD1-WRB 1 5 chr21:39200219:- chr21:39390698:+ FRAMESHIFT NA TCGA-F2-6879-01A-11R-2156-07 LRP6-PTPRO 11 62 chr12:12179810:- chr12:15580697:+ INFRAME NA TCGA-F2-6879-01A-11R-2156-07 TANK-MARCH7 2 14 chr2:161204793:+ chr2:159767284:+ INFRAME NA TCGA-F2-6879-01A-11R-2156-07 HIST4H4-RERG 1 10 chr12:14768939:- chr12:15121119:- . NA TCGA-F2-6879-01A-11R-2156-07 TRPM7-TNFAIP8L3 1 3 chr15:50657781:- chr15:51058443:- FRAMESHIFT NA TCGA-F2-A7TX-01A-33R-A38C-07 DHRSX-RPS4Y1 5 21 chrY:2291502:- chrY:2865088:+ INFRAME NA TCGA-F2-A7TX-01A-33R-A38C-07 TMEM63A-LEFTY1 2 8 chr1:225865897:- chr1:225888032:- FRAMESHIFT NA TCGA-FB-A7DR-01A-21R-A33R-07 CPSF6-DCN 2 1 chr12:69262562:+ chr12:91146252:- FRAMESHIFT NA TCGA-FB-AAPZ-01A-11R-A41B-07 ORAI2-SLC47A2 7 17 chr7:102439181:+ chr17:19681670:- INFRAME NA TCGA-FB-AAPZ-01A-11R-A41B-07 COPS7B-PTMA 2 5 chr2:231781883:+ chr2:231711348:+ INFRAME NA TCGA-FB-AAQ1-01A-12R-A41B-07 IGSF11-UPK1B 2 3 chr3:119034531:- chr3:119186714:+ . NA TCGA-FB-AAQ2-01A-31R-A41B-07 NSMCE2-TBC1D31 1 14 chr8:125182256:+ chr8:123140761:+ FRAMESHIFT NA TCGA-FB-AAQ2-01A-31R-A41B-07 CIRBP-APC2 1 8 chr19:1272051:+ chr19:1465155:+ FRAMESHIFT NA TCGA-FB-AAQ3-01A-11R-A41B-07 LASP1-RBX1 6 2 chr17:38890504:+ chr22:40953555:+ INFRAME NA TCGA-H6-8124-01A-11R-2404-07 GTF2IRD1-CCDC146 3 10 chr7:74454176:+ chr7:77167658:+ . NA TCGA-HV-A5A3-01A-11R-A26U-07 ZFC3H1-PTPRR 4 17 chr12:71623360:- chr12:70746086:- FRAMESHIFT NA TCGA-HV-A5A3-01A-11R-A26U-07 TSHZ3-CDH2 2 7 chr19:31349180:- chr18:28013909:- INFRAME NA TCGA-HV-A5A5-01A-11R-A26U-07 ARF3-WNT10B 3 19 chr12:48957310:- chr12:48970569:- . NA TCGA-HV-A5A5-01A-11R-A26U-07 SIPA1L3-CATSPERG 1 11 chr19:37932692:+ chr19:38370159:+ . NA TCGA-HV-A5A6-01A-11R-A26U-07 SBF1-MLC1 12 15 chr22:50474786:- chr22:50068555:- FRAMESHIFT NA TCGA-HV-AA8X-01A-11R-A39D-07 OSBPL1A-ZNF521 10 30 chr18:24225042:- chr18:25062741:- FRAMESHIFT NA TCGA-HZ-7289-01A-11R-2156-07 CRYL1-GJB6 19 48 chr13:20489370:- chr13:20223495:- . NA TCGA-HZ-7922-01A-11R-2156-07 CERS5-MYRFL 2 5 chr12:50167101:- chr12:69855280:+ FRAMESHIFT NA TCGA-HZ-7925-01A-11R-2156-07 HADH-ZP2 7 9 chr4:107990064:+ chr16:21203251:- INFRAME NA TCGA-HZ-7926-01A-11R-2156-07 TYK2-CDC37 5 37 chr19:10378214:- chr19:10393441:- FRAMESHIFT NA TCGA-HZ-7926-01A-11R-2156-07 ZNF292-DLGAP1 2 3 chr6:87218731:+ chr18:4151287:- . NA TCGA-HZ-8002-01A-11R-2204-07 PLEKHA5-ACRBP 1 3 chr12:19132450:+ chr12:6646577:- FRAMESHIFT NA TCGA-HZ-8003-01A-21R-2204-07 REG3G-PRSS1 1000 1000 chr2:79027909:+ chr7:142751964:+ FRAMESHIFT NA TCGA-HZ-8003-01A-21R-2204-07 EFHD2-CTRB2 1000 1000 chr1:15429395:+ chr16:75206111:- . NA TCGA-HZ-8003-01A-21R-2204-07 REG3G-CPA1 1000 1000 chr2:79028428:+ chr7:130382113:+ . NA TCGA-HZ-8005-01A-11R-2204-07 CASC21-CASC11 3 15 chr8:127339435:+ chr8:127733959:- . NA TCGA-HZ-8005-01A-11R-2204-07 CCDC57-SECTM1 1 1 chr17:82212785:- chr17:82327292:- . NA TCGA-HZ-8005-01A-11R-2204-07 CSNK1E-MB 1000 1000 chr22:38398438:- chr22:35637208:- . NA TCGA-HZ-8315-01A-11R-2404-07 PPP1R13L-CCDC9 38 154 chr19:45404999:- chr19:47266611:+ . NA TCGA-HZ-8317-01A-11R-2404-07 FAM49B-CASC8 5 23 chr8:129903312:- chr8:127420963:- . NA TCGA-HZ-8317-01A-11R-2404-07 CHST6-FA2H 4 10 chr16:75481817:- chr16:74740115:- . NA TCGA-HZ-8636-01A-21R-2404-07 FRMD4B-OXCT1 6 21 chr3:69218322:- chr5:41801070:- INFRAME NA TCGA-HZ-8636-01A-21R-2404-07 CABLES1-MYO5B 1 3 chr18:23194540:+ chr18:50055378:- FRAMESHIFT NA TCGA-HZ-8637-01A-11R-2404-07 ZC3H7B-RBX1 5 33 chr22:41356808:+ chr22:40972476:+ INFRAME NA TCGA-HZ-8637-01A-11R-2404-07 REV1-AFF3 6 10 chr2:99449336:- chr2:99568915:- INFRAME NA TCGA-HZ-A49G-01A-11R-A26U-07 TACC2-MAP3K5 2 7 chr10:122019881:+ chr6:136611387:- . NA TCGA-HZ-A49I-01A-12R-A26U-07 LRIG3-ATF7 31 116 chr12:58913982:- chr12:53601021:- . NA TCGA-HZ-A49I-01A-12R-A26U-07 AXL-CDRT1 21 23 chr19:41231298:+ chr17:15566353:- . NA TCGA-HZ-A49I-01A-12R-A26U-07 PPHLN1-TIMELESS 6 34 chr12:42393689:+ chr12:56425152:- INFRAME NA TCGA-HZ-A49I-01A-12R-A26U-07 SEL1L3-HSD17B13 1 25 chr4:25833448:- chr4:87318436:- FRAMESHIFT NA TCGA-HZ-A49I-01A-12R-A26U-07 FRS2-MMP19 1 11 chr12:69470530:+ chr12:55842438:- . NA TCGA-HZ-A49I-01A-12R-A26U-07 C2CD5-BCAT1 1 7 chr12:22474751:- chr12:24849949:- INFRAME NA TCGA-HZ-A49I-01A-12R-A26U-07 PPM1H-DYRK2 1 3 chr12:62788226:- chr12:67657106:+ FRAMESHIFT NA TCGA-HZ-A4BH-01A-11R-A26U-07 PPAT-IGFBP7 1 25 chr4:56401330:- chr4:57040933:- INFRAME NA TCGA-HZ-A4BH-01A-11R-A26U-07 YPEL2-BPTF 1 13 chr17:59353526:+ chr17:67853940:+ FRAMESHIFT NA TCGA-HZ-A4BH-01A-11R-A26U-07 ACTN4-NOVA2 1 8 chr19:38647907:+ chr19:45961153:- INFRAME NA TCGA-HZ-A4BK-01A-11R-A26U-07 DHX8-MSI2 5 9 chr17:43490463:+ chr17:57596868:+ INFRAME NA TCGA-HZ-A4BK-01A-11R-A26U-07 LRIG3-ATF7 1 1 chr12:58913982:- chr12:53601021:- . NA TCGA-HZ-A77P-01A-11R-A33R-07 TDP2-DCDC2 9 22 chr6:24652983:- chr6:24302044:- INFRAME NA TCGA-HZ-A77P-01A-11R-A33R-07 IKBKB-LETM2 5 18 chr8:42272205:+ chr8:38400272:+ INFRAME NA TCGA-HZ-A77P-01A-11R-A33R-07 PCMTD1-MRPL15 6 5 chr8:51898930:- chr8:54136511:+ FRAMESHIFT NA TCGA-HZ-A77P-01A-11R-A33R-07 STEAP2-GTPBP10 1 3 chr7:90227498:+ chr7:90372155:+ FRAMESHIFT NA TCGA-HZ-A77P-01A-11R-A33R-07 ITPR3-CARMIL1 1 1 chr6:33674265:+ chr6:25619447:+ FRAMESHIFT NA TCGA-IB-7646-01A-11R-2156-07 ARHGAP5-L2HGDH 4 12 chr14:32094386:+ chr14:50294246:- INFRAME NA TCGA-IB-7646-01A-11R-2156-07 UBXN8-NRG1 2 9 chr8:30756887:+ chr8:32287101:+ . NA TCGA-IB-7646-01A-11R-2156-07 MSI2-HEATR6 1 6 chr17:57529724:+ chr17:60070807:- FRAMESHIFT NA TCGA-IB-7647-01A-11R-2156-07 GMDS-VAPB 118 310 chr6:1930103:- chr20:58444077:+ INFRAME NA TCGA-IB-7647-01A-11R-2156-07 PPIL2-TBX1 1 10 chr22:21675115:+ chr22:19779220:+ INFRAME NA TCGA-IB-7647-01A-11R-2156-07 B3GNT4-BCL7A 1 9 chr12:122203801:+ chr12:122030700:+ . NA TCGA-IB-7652-01A-11R-2156-07 GOLPH3L-HORMAD1 11 76 chr1:150694656:- chr1:150703393:- INFRAME NA TCGA-IB-7652-01A-11R-2156-07 ABCF1-PRR3 5 29 chr6:30571560:+ chr6:30561834:+ INFRAME NA TCGA-IB-7652-01A-11R-2156-07 PDSS2-CCDC178 3 27 chr6:107334198:- chr18:32974681:- FRAMESHIFT NA TCGA-IB-7652-01A-11R-2156-07 ZDHHC20-GJB6 1 9 chr13:21459054:- chr13:20223495:- . NA TCGA-IB-7652-01A-11R-2156-07 CEL-CPA1 1 6 chr9:133064762:+ chr7:130385146:+ INFRAME NA TCGA-IB-7652-01A-11R-2156-07 SLC35F2-AMPD3 1 4 chr11:107803001:- chr11:10461515:+ FRAMESHIFT NA TCGA-IB-7885-01A-11R-2156-07 CENPBD1P1-RPS5 3 23 chr19:58575588:+ chr19:58392976:+ . NA TCGA-IB-7890-01A-12R-2204-07 DENND4C-ANP32B 1 34 chr9:19230833:+ chr9:98011271:+ . NA TCGA-IB-7890-01A-12R-2204-07 PPFIBP1-TSPAN11 2 4 chr12:27524365:+ chr12:30953981:+ . NA TCGA-IB-7893-01A-11R-2204-07 ARID1A-WDTC1 13 71 chr1:26775707:+ chr1:27282239:+ INFRAME Likely Oncogenic NA TCGA-IB-7893-01A-11R-2204-07 LAMA4-PSAP 2 1 chr6:112172611:- chr10:71822007:- INFRAME NA TCGA-IB-7893-01A-11R-2204-07 STARD4-ASTN2 1 2 chr5:111501002:- chr9:117008259:- INFRAME NA TCGA-IB-A5SQ-01A-11R-A32O-07 MIB1-GREB1L 1 3 chr18:21741812:+ chr18:21505412:+ INFRAME NA TCGA-IB-A5SS-01A-11R-A32O-07 SERPINE1-COL1A2 2 1 chr7:101128664:+ chr7:94430247:+ FRAMESHIFT NA TCGA-IB-A5ST-01A-11R-A32O-07 CREB3-TMEM8B 53 164 chr9:35733485:+ chr9:35845975:+ INFRAME NA TCGA-IB-A6UF-01A-23R-A33R-07 AGO2-CHRAC1 4 28 chr8:140635485:- chr8:140514369:+ FRAMESHIFT NA TCGA-IB-A6UF-01A-23R-A33R-07 DIS3L2-EFHD1 2 16 chr2:232163632:+ chr2:232662802:+ INFRAME NA TCGA-IB-A6UF-01A-23R-A33R-07 PKP2-MRPS35 2 10 chr12:32796109:- chr12:27735447:+ FRAMESHIFT NA TCGA-IB-A6UF-01A-23R-A33R-07 KCTD5-CCNF 2 4 chr16:2696043:+ chr16:2443649:+ FRAMESHIFT NA TCGA-IB-A6UG-01A-32R-A33R-07 MKL1-ENTHD1 4 13 chr22:40552106:- chr22:39765609:- . NA TCGA-IB-A6UG-01A-32R-A33R-07 PRSS2-CELA3A 1 23 chr7:142774055:+ chr1:22009705:+ INFRAME NA TCGA-IB-A6UG-01A-32R-A33R-07 REG3A-CTRB2 1 4 chr2:79157572:- chr16:75204322:- INFRAME NA TCGA-IB-A7LX-01A-12R-A36G-07 SUPT5H-SAMD4B 18 126 chr19:39459960:+ chr19:39380990:+ INFRAME NA TCGA-IB-A7LX-01A-12R-A36G-07 AHI1-HBS1L 3 15 chr6:135394776:- chr6:134966473:- FRAMESHIFT NA TCGA-IB-A7M4-01A-11R-A36G-07 SEH1L-IMPA2 17 53 chr18:12951905:+ chr18:11999054:+ INFRAME NA TCGA-IB-A7M4-01A-11R-A36G-07 ROCK1-ANKRD29 2 3 chr18:21015431:- chr18:23601309:- INFRAME NA TCGA-IB-AAUM-01A-11R-A37L-07 CELA3A-PRSS2 5 96 chr1:22006993:+ chr7:142773490:+ INFRAME NA TCGA-IB-AAUM-01A-11R-A37L-07 PRSS1-PNLIP 1 93 chr7:142749524:+ chr10:116555178:+ INFRAME NA TCGA-IB-AAUM-01A-11R-A37L-07 PNLIP-PLA2G1B 1 8 chr10:116556118:+ chr12:120322317:- FRAMESHIFT NA TCGA-IB-AAUN-01A-12R-A38C-07 NUP153-C6orf10 2 11 chr6:17706277:- chr6:32369983:- FRAMESHIFT NA TCGA-IB-AAUN-01A-12R-A38C-07 SYNGAP1-COL11A2 3 4 chr6:33425903:+ chr6:33166206:- FRAMESHIFT NA TCGA-IB-AAUP-01A-11R-A37L-07 AXIN2-VWA3B 6 21 chr17:65557806:- chr2:98256124:+ INFRAME Likely Oncogenic NA TCGA-IB-AAUQ-01A-22R-A41I-07 ACAP3-SCNN1D 4 6 chr1:1294529:- chr1:1280625:+ . NA TCGA-IB-AAUQ-01A-22R-A41I-07 MUC4-PCYT1A 3 4 chr3:195811736:- chr3:196214373:- FRAMESHIFT NA TCGA-IB-AAUQ-01A-22R-A41I-07 ATG5-RTN4IP1 2 4 chr6:106201972:- chr6:106592300:- FRAMESHIFT NA TCGA-IB-AAUR-01A-21R-A38C-07 RNPEP-TIMM17A 2 3 chr1:201983113:+ chr1:201957511:+ INFRAME NA TCGA-IB-AAUS-01A-12R-A38C-07 CNTNAP3B-SHB 4 11 chr9:42076869:- chr9:38016131:- INFRAME NA TCGA-IB-AAUS-01A-12R-A38C-07 ANKIB1-CYP3A4 1 8 chr7:92392292:+ chr7:99762267:- INFRAME NA TCGA-IB-AAUU-01A-11R-A37L-07 SNCAIP-CSNK1G3 3 8 chr5:122403865:+ chr5:123545417:+ . NA TCGA-LB-A7SX-01A-11R-A33R-07 KIF26B-C1orf101 16 28 chr1:245367367:+ chr1:244610240:+ INFRAME NA TCGA-LB-A7SX-01A-11R-A33R-07 TMEM170B-SMIM13 3 13 chr6:11538374:+ chr6:11134403:+ INFRAME NA TCGA-LB-A7SX-01A-11R-A33R-07 ERBB2-PPP1R1B 3 8 chr17:39727547:+ chr17:39635607:+ INFRAME NA TCGA-LB-A7SX-01A-11R-A33R-07 NEMF-L2HGDH 4 3 chr14:49825867:- chr14:50237725:- INFRAME NA TCGA-LB-A7SX-01A-11R-A33R-07 ICAM3-TYK2 3 3 chr19:10334528:- chr19:10358138:- FRAMESHIFT NA TCGA-LB-A8F3-01A-11R-A36G-07 CTRB2-IGF2 1000 1000 chr16:75205773:- chr11:2130750:- . NA TCGA-LB-A8F3-01A-11R-A36G-07 REG1B-IGF2 1000 1000 chr2:79085050:- chr11:2131667:- . NA TCGA-Q3-AA2A-01A-11R-A37L-07 TAF12-ATAD3C 3 25 chr1:28642992:- chr1:1468384:+ . NA TCGA-RB-AA9M-01A-11R-A39D-07 AKT2-NSMAF 1 7 chr19:40235890:- chr8:58595659:- INFRAME Likely Oncogenic NA TCGA-RB-AA9M-01A-11R-A39D-07 SLC52A2-HSF1 1 3 chr8:144359423:+ chr8:144311505:+ FRAMESHIFT NA TCGA-S4-A8RO-01A-12R-A37L-07 TTC17-CNTN5 1 2 chr11:43379322:+ chr11:99556145:+ . NA TCGA-S4-A8RP-01A-11R-A36G-07 RAB9A-EGFL6 13 35 chrX:13689288:+ chrX:13589556:+ . NA TCGA-S4-A8RP-01A-11R-A36G-07 TNRC6B-CBY1 2 5 chr22:40156182:+ chr22:38665546:+ . NA TCGA-US-A776-01A-13R-A33R-07 ZNF493-RPL13A 3 3 chr19:21397267:+ chr19:49489850:+ INFRAME NA TCGA-US-A779-01A-11R-A32O-07 MTAP-PTPRD 24 34 chr9:21838010:+ chr9:9766851:- . Likely Oncogenic NA TCGA-US-A779-01A-11R-A32O-07 AGO2-PCAT1 11 27 chr8:140535468:- chr8:127006555:+ . NA TCGA-US-A779-01A-11R-A32O-07 ATAD2-TATDN1 6 11 chr8:123396187:- chr8:124495542:- FRAMESHIFT NA TCGA-XD-AAUI-01A-42R-A41B-07 ANKRD11-DYNLRB2 15 4 chr16:89490245:- chr16:80549484:+ . NA TCGA-XD-AAUI-01A-42R-A41B-07 DDX52-STAT5B 2 8 chr17:37628561:- chr17:42202808:- INFRAME NA TCGA-XD-AAUI-01A-42R-A41B-07 NFRKB-CRTAM 1 3 chr11:129876721:- chr11:122850068:+ INFRAME NA TCGA-XD-AAUI-01A-42R-A41B-07 SPOP-CDK12 1 2 chr17:49677933:- chr17:39490557:+ . Likely Oncogenic NA TCGA-XN-A8T3-01A-11R-A36G-07 SS18-NPC1 8 20 chr18:26078076:- chr18:23506642:- FRAMESHIFT NA TCGA-XN-A8T3-01A-11R-A36G-07 UHRF1BP1-DAXX 5 6 chr6:34859571:+ chr6:33324030:- . NA TCGA-XN-A8T3-01A-11R-A36G-07 ROCK1-OSBPL1A 1 7 chr18:21023620:- chr18:24303718:- INFRAME NA TCGA-XN-A8T5-01A-12R-A36G-07 RNF8-HIST1H2AC 2 21 chr6:37360574:+ chr6:26138054:+ . NA TCGA-XN-A8T5-01A-12R-A36G-07 DDX39B-ETV7 4 12 chr6:31535367:- chr6:36385669:- INFRAME NA TCGA-XN-A8T5-01A-12R-A36G-07 KCTD20-ZNF311 1 4 chr6:36470257:+ chr6:29004214:- . NA TCGA-XN-A8T5-01A-12R-A36G-07 ROCK1-THNSL1 1 4 chr18:21110818:- chr10:25021742:+ . NA TCGA-P8-A5KC-01A-11R-A35K-07 IGF2-ASCL2 240 487 chr11:2130225:- chr11:2270589:- . NA TCGA-P8-A5KC-01A-11R-A35K-07 ADCYAP1R1-GHRHR 5 25 chr7:31100210:+ chr7:30974971:+ INFRAME NA TCGA-P8-A5KC-01A-11R-A35K-07 UBTF-MAML3 4 17 chr17:44210124:- chr4:139890967:- INFRAME NA TCGA-P8-A5KC-01A-11R-A35K-07 MAML3-SLC25A39 1 3 chr4:139889357:- chr17:44323343:- FRAMESHIFT NA TCGA-PR-A5PF-01A-11R-A35K-07 CCT2-CPM 8 33 chr12:69585524:+ chr12:68859071:- FRAMESHIFT NA TCGA-PR-A5PF-01A-11R-A35K-07 UBTF-MAML3 1 15 chr17:44209352:- chr4:139890967:- INFRAME NA TCGA-PR-A5PG-01A-11R-A35K-07 UNC5B-IGF2 1000 1000 chr10:71300746:+ chr11:2132146:- . NA TCGA-PR-A5PH-01A-11R-A35K-07 UBTF-MAML3 8 21 chr17:44209352:- chr4:139890967:- INFRAME NA TCGA-PR-A5PH-01A-11R-A35K-07 CC2D1A-ZSWIM4 4 19 chr19:13927265:+ chr19:13828645:+ INFRAME NA TCGA-PR-A5PH-01A-11R-A35K-07 PHOX2A-CLPB 3 3 chr11:72241102:- chr11:72359008:- FRAMESHIFT NA TCGA-PR-A5PH-01A-11R-A35K-07 MAML3-MED24 1 6 chr4:140152860:- chr17:40053380:- INFRAME NA TCGA-QR-A6GR-01A-11R-A35K-07 ARHGEF12-OAF 1 7 chr11:120337275:+ chr11:120225661:+ FRAMESHIFT NA TCGA-QR-A6GS-01A-11R-A35K-07 DCAKD-ADAMTS7 2 6 chr17:45060888:- chr15:78791223:- . NA TCGA-QR-A6GS-01A-11R-A35K-07 GON4L-ARHGEF2 2 1 chr1:155853276:- chr1:155962718:- FRAMESHIFT NA TCGA-QR-A6GT-01A-11R-A35K-07 PLD3-GNAS 1 4 chr19:40376774:+ chr20:58898941:+ FRAMESHIFT NA TCGA-QR-A6H2-01A-11R-A35K-07 MAST2-OMA1 4 13 chr1:45959477:+ chr1:58481174:- FRAMESHIFT NA TCGA-QR-A700-01A-11R-A35K-07 IRF2BP2-SP2 20 227 chr1:234608668:- chr17:47924917:+ . NA TCGA-QR-A700-01A-11R-A35K-07 ARHGEF12-MCAM 2 5 chr11:120337275:+ chr11:119317915:- . NA TCGA-QR-A70C-01A-21R-A35K-07 FOCAD-HABP4 1 3 chr9:20789608:+ chr9:96488089:+ INFRAME NA TCGA-QR-A70G-01B-11R-A35K-07 APPBP2-RAB5C 27 67 chr17:60494466:- chr17:42128800:- INFRAME NA TCGA-QR-A70G-01B-11R-A35K-07 PHF21A-TTC25 8 79 chr11:46076754:- chr17:41964993:+ FRAMESHIFT NA TCGA-QR-A70G-01B-11R-A35K-07 FNDC3A-C14orf159 2 7 chr13:48976917:+ chr14:91167225:+ . NA TCGA-QR-A70G-01B-11R-A35K-07 PHF21A-CNP 1 7 chr11:46076754:- chr17:41968068:+ INFRAME NA TCGA-QR-A70G-01B-11R-A35K-07 BCAS3-PHF21A 1 2 chr17:60684036:+ chr11:46092223:- . NA TCGA-QR-A70H-01A-12R-A35K-07 UBTF-MAML3 4 11 chr17:44209352:- chr4:139890967:- INFRAME NA TCGA-QR-A70H-01A-12R-A35K-07 MAML3-GPATCH8 1 2 chr4:139889357:- chr17:44406051:- INFRAME NA TCGA-QR-A70I-01A-11R-A35K-07 PAM16-PITPNM3 6 14 chr16:4351232:- chr17:6484292:- INFRAME NA TCGA-QR-A70J-01A-11R-A35K-07 EML1-MEG3 44 130 chr14:99897294:+ chr14:100845458:+ . NA TCGA-QR-A70J-01A-11R-A35K-07 EML1-MEG8 44 83 chr14:99897294:+ chr14:100845458:+ . NA TCGA-QR-A70X-01A-11R-A35K-07 ZNF251-COMMD5 3 8 chr8:144753683:- chr8:144841743:- . NA TCGA-QR-A70X-01A-11R-A35K-07 TRIM33-SHC1 1 6 chr1:114420380:- chr1:154970199:- INFRAME NA TCGA-QT-A5XJ-01A-11R-A35K-07 MICAL3-PTGER3 23 147 chr22:18001393:- chr1:70852859:- . NA TCGA-QT-A5XJ-01A-11R-A35K-07 PSIP1-TBL1X 11 37 chr9:15486006:- chrX:9653545:+ . NA TCGA-QT-A5XJ-01A-11R-A35K-07 NOCT-MGST2 6 28 chr4:139016171:+ chr4:139678543:+ INFRAME NA TCGA-QT-A5XJ-01A-11R-A35K-07 SPPL3-B3GALT4 6 7 chr12:120903845:- chr6:33284346:+ . NA TCGA-QT-A5XJ-01A-11R-A35K-07 SNAPC3-FOCAD 3 8 chr9:15461805:+ chr9:20923660:+ . NA TCGA-QT-A5XJ-01A-11R-A35K-07 B3GALT4-SPPL3 3 6 chr6:33279000:+ chr12:120810886:- . NA TCGA-QT-A5XN-01A-11R-A35K-07 CIPC-NGFR 9 20 chr14:77098361:+ chr17:49502063:+ . NA TCGA-QT-A5XN-01A-11R-A35K-07 DAAM1-HS6ST3 3 18 chr14:59188768:+ chr13:96755855:+ . NA TCGA-QT-A5XN-01A-11R-A35K-07 TTC39A-FGGY 4 12 chr1:51321721:- chr1:59512311:+ FRAMESHIFT NA TCGA-QT-A5XN-01A-11R-A35K-07 MEGF9-TTLL5 3 14 chr9:120713758:- chr14:75764615:+ FRAMESHIFT NA TCGA-QT-A5XO-01A-11R-A35K-07 CREB5-APH1A 23 73 chr7:28724332:+ chr1:150269329:- . NA TCGA-QT-A5XO-01A-11R-A35K-07 TSPAN9-FGD4 9 72 chr12:3201256:+ chr12:32644594:+ . NA TCGA-QT-A5XO-01A-11R-A35K-07 SEPT6-RPL39 13 50 chrX:119629318:- chrX:119790011:- FRAMESHIFT NA TCGA-QT-A5XO-01A-11R-A35K-07 SEPT6-UPF3B 6 50 chrX:119629318:- chrX:119807581:- FRAMESHIFT NA TCGA-QT-A5XO-01A-11R-A35K-07 ARHGAP35-PGPEP1L 3 26 chr19:46937408:+ chr15:98969651:- FRAMESHIFT NA TCGA-QT-A5XO-01A-11R-A35K-07 TSPAN9-DNM1L 3 19 chr12:3201256:+ chr12:32701415:+ INFRAME NA TCGA-QT-A5XO-01A-11R-A35K-07 NBEA-COLGALT2 3 10 chr13:35472536:+ chr1:183978520:- FRAMESHIFT NA TCGA-QT-A5XO-01A-11R-A35K-07 SLC25A13-SH2D3C 2 10 chr7:96184277:- chr9:127741959:- FRAMESHIFT NA TCGA-QT-A5XO-01A-11R-A35K-07 KCNAB1-LRTM1 1 4 chr3:156515220:+ chr3:54918892:- INFRAME NA TCGA-QT-A5XP-01A-11R-A35K-07 PUM2-MIPOL1 4 17 chr2:20307978:- chr14:37499908:+ FRAMESHIFT NA TCGA-QT-A7U0-01A-11R-A35K-07 RGS4-DLK1 1000 1000 chr1:163076540:+ chr14:100734313:+ . NA TCGA-QT-A7U0-01A-11R-A35K-07 SLC6A17-IGF2 1000 1000 chr1:110200800:+ chr11:2132078:- . NA TCGA-RT-A6YC-01A-12R-A35K-07 ZBTB20-FOCAD 15 51 chr3:114900304:- chr9:20916893:+ . NA TCGA-RT-A6YC-01A-12R-A35K-07 SORBS2-PDLIM3 13 30 chr4:185775227:- chr4:185525171:- . NA TCGA-RT-A6YC-01A-12R-A35K-07 ZDHHC17-ATP1A1 1 9 chr12:76822531:+ chr1:116395110:+ FRAMESHIFT NA TCGA-RW-A67W-01A-11R-A35K-07 PHF21A-TTC25 1 3 chr11:46076754:- chr17:41964993:+ FRAMESHIFT NA TCGA-RW-A67Y-01A-11R-A35K-07 MACF1-MSTO2P 5 3 chr1:39105717:+ chr1:155746619:+ . NA TCGA-RW-A681-01A-11R-A35K-07 DPH1-RPA1 1 3 chr17:2030230:+ chr17:1842803:+ FRAMESHIFT NA TCGA-RW-A686-01A-11R-A35K-07 APIP-S100A13 7 18 chr11:34916228:- chr1:153626533:- . NA TCGA-RW-A686-01A-11R-A35K-07 BPHL-UQCC2 7 12 chr6:3118847:+ chr6:33697750:- FRAMESHIFT NA TCGA-RW-A686-01A-11R-A35K-07 UBTF-MAML3 3 3 chr17:44210124:- chr4:139890967:- INFRAME NA TCGA-RW-A686-01A-11R-A35K-07 GTPBP1-CD101 1 8 chr22:38730881:+ chr1:117025509:+ . NA TCGA-RW-A686-01A-11R-A35K-07 MAP3K5-NDUFB9 1 3 chr6:136791710:- chr8:124567647:+ FRAMESHIFT NA TCGA-RW-A688-01A-11R-A35K-07 MAP7-MAP3K5 13 42 chr6:136550342:- chr6:136583740:- FRAMESHIFT NA TCGA-RW-A688-01A-11R-A35K-07 TECTA-FOXN3 2 3 chr11:121130211:+ chr14:89162969:- FRAMESHIFT NA TCGA-RW-A68A-01A-11R-A35K-07 SLC30A6-ALDH3A2 1 7 chr2:32193983:+ chr17:19661127:+ FRAMESHIFT NA TCGA-RW-A68B-01A-11R-A35K-07 CACNA1C-PIAS4 2 4 chr12:2053611:+ chr19:4033100:+ INFRAME NA TCGA-RW-A8AZ-01A-11R-A35K-07 FRMD3-U2AF1 14 27 chr9:83281550:- chr21:43104402:- . NA TCGA-RW-A8AZ-01A-11R-A35K-07 UBTF-MAML3 6 17 chr17:44210124:- chr4:139890967:- INFRAME NA TCGA-RW-A8AZ-01A-11R-A35K-07 EML4-PKDCC 4 6 chr2:42169636:+ chr2:42053239:+ FRAMESHIFT NA TCGA-RW-A8AZ-01A-11R-A35K-07 FAM168A-C5 1 2 chr11:73597923:- chr9:121046383:- . NA TCGA-S7-A7WL-01A-11R-A35L-07 KIAA1614-XPR1 13 38 chr1:180928573:+ chr1:180824753:+ FRAMESHIFT NA TCGA-S7-A7WL-01A-11R-A35L-07 KCNH2-TMEM176B 1 3 chr7:150946877:- chr7:150796574:- . NA TCGA-S7-A7WM-01A-12R-A35L-07 TRAF3-ITPK1 42 126 chr14:102876525:+ chr14:92958366:- INFRAME NA TCGA-S7-A7WM-01A-12R-A35L-07 AHDC1-ST3GAL3 4 9 chr1:27534762:- chr1:43898235:+ . NA TCGA-S7-A7WM-01A-12R-A35L-07 SEZ6L-POMGNT1 2 3 chr22:26313902:+ chr1:46197871:- . NA TCGA-S7-A7WP-01A-11R-A35L-07 ZNF91-ASF1B 11 42 chr19:23395325:- chr19:14121708:- INFRAME NA TCGA-S7-A7WT-01A-12R-A35L-07 WDTC1-FNBP1L 6 9 chr1:27287861:+ chr1:93534705:+ FRAMESHIFT NA TCGA-S7-A7WT-01A-12R-A35L-07 GALNT18-TH 1 5 chr11:11372515:- chr11:2169871:- INFRAME NA TCGA-SP-A6QF-01A-12R-A35L-07 HS6ST3-ACTR1A 1 2 chr13:96091569:+ chr10:102481898:- FRAMESHIFT NA TCGA-SP-A6QI-01A-12R-A35L-07 HAND2-SLC30A9 180 482 chr4:173528735:- chr4:42038986:+ INFRAME NA TCGA-SQ-A6I4-01A-11R-A35L-07 DLK1-PENK 1000 1000 chr14:100735046:+ chr8:56446734:- . NA TCGA-SR-A6MP-01A-11R-A35L-07 SLC39A11-SLC6A4 4 68 chr17:72947752:- chr17:30211424:- INFRAME NA TCGA-SR-A6MP-01A-11R-A35L-07 SDC2-C8orf88 5 20 chr8:96494331:+ chr8:90980461:- . NA TCGA-SR-A6MP-01A-11R-A35L-07 NEGR1-NSF 5 9 chr1:72282319:- chr17:46674414:+ FRAMESHIFT NA TCGA-SR-A6MP-01A-11R-A35L-07 EFR3A-SLFN12L 4 8 chr8:131946633:+ chr17:35478185:- FRAMESHIFT NA TCGA-SR-A6MP-01A-11R-A35L-07 PIGK-CSGALNACT1 3 6 chr1:77206640:- chr8:19506130:- . NA TCGA-SR-A6MP-01A-11R-A35L-07 SMURF2-TEKT3 3 3 chr17:64586086:- chr17:15331614:- . NA TCGA-SR-A6MP-01A-11R-A35L-07 USP33-CDK12 2 6 chr1:77759643:- chr17:39470882:+ . Likely Oncogenic NA TCGA-SR-A6MP-01A-11R-A35L-07 SLC39A11-HTT 1000 1000 chr17:72947752:- chr17:30211424:- . NA TCGA-SR-A6MS-01A-11R-A35L-07 NPY-IGF2 3 30 chr7:24289580:+ chr11:2129298:- . NA TCGA-SR-A6MS-01A-11R-A35L-07 SLC18A2-IGF2 1000 1000 chr10:117244167:+ chr11:2131710:- . NA TCGA-SR-A6MS-01A-11R-A35L-07 PTPRN-IGF2 1000 1000 chr2:219289769:- chr11:2130467:- . NA TCGA-SR-A6MT-01A-11R-A35L-07 APLP1-DBH 1 1 chr19:35874869:+ chr9:133658316:+ INFRAME NA TCGA-SR-A6MT-01A-11R-A35L-07 ZNF483-DNAJC25 1 1 chr9:111525262:+ chr9:111642839:+ . NA TCGA-TT-A6YJ-01A-11R-A35L-07 SYT2-KDM5B 1 27 chr1:202710258:- chr1:202731939:- . NA TCGA-TT-A6YN-01A-12R-A35L-07 GFRA3-TTC8 76 690 chr5:138253287:- chr14:88875026:+ INFRAME NA TCGA-TT-A6YN-01A-12R-A35L-07 TNRC6A-LIX1L 14 25 chr16:24797966:+ chr1:145942853:- FRAMESHIFT NA TCGA-TT-A6YO-01A-11R-A35L-07 CYP17A1-MTATP6P1 3 6 chr10:102830630:- chr1:633988:+ . NA TCGA-W2-A7HB-01A-11R-A35L-07 PIK3R1-GINS3 6 34 chr5:68227009:+ chr16:58386621:+ . Likely Oncogenic NA TCGA-W2-A7HB-01A-11R-A35L-07 ARL8B-CLASP2 6 14 chr3:5122588:+ chr3:33696933:- INFRAME NA TCGA-W2-A7HB-01A-11R-A35L-07 RPAP3-SYT1 1 4 chr12:47696276:- chr12:79353502:+ FRAMESHIFT NA TCGA-W2-A7HC-01A-11R-A35L-07 SOCS5-ADCY2 10 14 chr2:46699449:+ chr5:7520738:+ . NA TCGA-W2-A7HD-01A-11R-A35L-07 RNF216-RSPH10B2 6 9 chr7:5739276:- chr7:6798363:+ INFRAME NA TCGA-WB-A80K-01A-11R-A35L-07 UBTF-MAML3 24 70 chr17:44209352:- chr4:139890967:- INFRAME NA TCGA-WB-A80K-01A-11R-A35L-07 MAML3-FAM171A2 6 53 chr4:140152860:- chr17:44356588:- INFRAME NA TCGA-WB-A80K-01A-11R-A35L-07 MGRN1-RNPS1 8 15 chr16:4625048:+ chr16:2264760:- . NA TCGA-WB-A80M-01A-11R-A35L-07 KDM4B-PHYHIPL 32 122 chr19:5082504:+ chr10:59245057:+ FRAMESHIFT NA TCGA-WB-A80Y-01A-11R-A35L-07 TCF4-MAML3 11 38 chr18:55254497:- chr4:139890967:- INFRAME NA TCGA-WB-A80Y-01A-11R-A35L-07 TCF7L2-MAML3 1000 1000 chr18:55254497:- chr4:139890967:- . Likely Oncogenic NA TCGA-WB-A818-01A-11R-A35L-07 CC2D1A-ZMYND8 4 11 chr19:13919202:+ chr20:47310204:- INFRAME NA TCGA-WB-A81D-01A-11R-A35L-07 RALGAPA2-BSCL2 26 102 chr20:20629363:- chr11:62694711:- INFRAME NA TCGA-WB-A81D-01A-11R-A35L-07 TMEM178B-DPP6 15 107 chr7:141212704:+ chr7:154769417:+ INFRAME NA TCGA-WB-A81D-01A-11R-A35L-07 MSH2-SLCO6A1 6 19 chr2:47445657:+ chr5:102373494:- FRAMESHIFT Likely Oncogenic NA TCGA-WB-A81E-01A-11R-A35L-07 ZBTB4-RARA 4 20 chr17:7462419:- chr17:40330857:+ . NA TCGA-WB-A81F-01A-11R-A35L-07 EZH1-PDSS2 8 23 chr17:42727635:- chr6:107274227:- FRAMESHIFT NA TCGA-WB-A81F-01A-11R-A35L-07 FBXL20-ABRACL 4 24 chr17:39343180:- chr6:139034155:+ . NA TCGA-WB-A81F-01A-11R-A35L-07 RBFOX2-MB 5 16 chr22:35938847:- chr22:35637208:- . NA TCGA-WB-A81F-01A-11R-A35L-07 OPRD1-PTP4A2 4 9 chr1:28812610:+ chr1:31919658:- . NA TCGA-WB-A81F-01A-11R-A35L-07 UNC5B-IGF2 1000 1000 chr10:71300064:+ chr11:2132777:- . NA TCGA-WB-A81H-01A-11R-A35L-07 AMPD3-ANKH 15 39 chr11:10501590:+ chr5:14711310:- INFRAME NA TCGA-WB-A81I-01A-11R-A35L-07 CYB561-GNAS 1 9 chr17:63440727:- chr20:58895612:+ . NA TCGA-WB-A81J-01A-11R-A35L-07 KDM5B-ITPKB 8 33 chr1:202773118:- chr1:226648771:- INFRAME NA TCGA-WB-A81J-01A-11R-A35L-07 ARMC9-SSR2 2 17 chr2:231296253:+ chr1:156018368:- FRAMESHIFT NA TCGA-WB-A81J-01A-11R-A35L-07 RPE-PRDM5 1 9 chr2:210002783:+ chr4:120821345:- FRAMESHIFT NA TCGA-WB-A81J-01A-11R-A35L-07 NVL-C2orf72 1 7 chr1:224330071:- chr2:231041296:+ FRAMESHIFT NA TCGA-WB-A81K-01A-11R-A35L-07 MAML2-BCAS4 1 13 chr11:96091892:- chr20:50841766:+ INFRAME NA TCGA-WB-A81K-01A-11R-A35L-07 TMPRSS2-ERG 1 2 chr21:41498119:- chr21:38423561:- FRAMESHIFT Oncogenic NA TCGA-WB-A81P-01A-11R-A35L-07 ST3GAL3-GLCCI1 5 27 chr1:43736380:+ chr7:8084897:+ INFRAME NA TCGA-WB-A81S-01A-11R-A35L-07 TRIP12-SLC16A14 7 24 chr2:229858772:- chr2:230037531:- INFRAME NA TCGA-WB-A81S-01A-11R-A35L-07 LTBP4-POU2F2 2 16 chr19:40600177:+ chr19:42160392:- . NA TCGA-WB-A81S-01A-11R-A35L-07 RGS4-SERPINF2 1 9 chr1:163069528:+ chr17:1744992:+ . NA TCGA-WB-A81W-01A-11R-A35L-07 DPP6-GGNBP2 13 26 chr7:154475037:+ chr17:36581344:+ FRAMESHIFT NA TCGA-WB-A81W-01A-11R-A35L-07 PTPN21-EML5 4 3 chr14:88496413:- chr14:88644511:- INFRAME NA TCGA-WB-A81W-01A-11R-A35L-07 CACNB4-YWHAZ 3 2 chr2:151971545:- chr8:100925039:- INFRAME NA TCGA-WB-A81W-01A-11R-A35L-07 GRIP1-NR2E3 3 2 chr12:66539078:- chr15:71807018:+ . NA TCGA-WB-A81W-01A-11R-A35L-07 EP400-DPYSL5 1 5 chr12:131994956:+ chr2:26898496:+ . NA TCGA-2A-A8VL-01A-21R-A37L-07 GOLGA4-ACAA1 7 89 chr3:37273601:+ chr3:38103793:- . NA TCGA-2A-A8VL-01A-21R-A37L-07 TMPRSS2-ERG 8 55 chr21:41494356:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-2A-A8VL-01A-21R-A37L-07 PUM2-MTFR1L 9 44 chr2:20350597:- chr1:25831921:+ . NA TCGA-2A-A8VL-01A-21R-A37L-07 DENND5A-SCUBE2 3 4 chr11:9150081:- chr11:9021955:- INFRAME NA TCGA-2A-A8VL-01A-21R-A37L-07 ZNF69-CFAP52 2 5 chr19:11887986:+ chr17:9628672:+ FRAMESHIFT NA TCGA-2A-A8VT-01A-11R-A37L-07 TMPRSS2-ERG 77 114 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-2A-A8VT-01A-11R-A37L-07 WDR20-LRP10 11 45 chr14:102140172:+ chr14:22872738:+ FRAMESHIFT NA TCGA-2A-A8VT-01A-11R-A37L-07 GCN1-METTL1 7 0 chr12:120194680:- chr12:57771257:- FRAMESHIFT NA TCGA-2A-A8VT-01A-11R-A37L-07 KMT2C-NDUFAF4 4 9 chr7:152157761:- chr6:96896847:- FRAMESHIFT Likely Oncogenic NA TCGA-2A-A8VT-01A-11R-A37L-07 ABHD17A-TCF3 2 11 chr19:1881235:- chr19:1646427:- FRAMESHIFT NA TCGA-2A-A8VT-01A-11R-A37L-07 RERE-ZNF345 3 7 chr1:8422727:- chr19:36876785:+ . NA TCGA-2A-A8VV-01A-11R-A37L-07 PLPP1-CNTLN 29 75 chr5:55534572:- chr9:17484295:+ FRAMESHIFT NA TCGA-2A-A8VV-01A-11R-A37L-07 TMPRSS2-ERG 23 99 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-2A-A8VV-01A-11R-A37L-07 BDP1-LINS1 1 6 chr5:71458855:+ chr15:100575128:- INFRAME NA TCGA-2A-A8VX-01A-11R-A37L-07 WWC1-FMN2 11 27 chr5:168371533:+ chr1:240177921:+ INFRAME NA TCGA-2A-A8W1-01A-11R-A37L-07 TOB2-MRPS18B 95 270 chr22:41446379:- chr6:30624883:+ . NA TCGA-2A-A8W1-01A-11R-A37L-07 SH3GLB2-GTSE1 17 34 chr9:129028092:- chr22:46326436:+ FRAMESHIFT NA TCGA-2A-A8W1-01A-11R-A37L-07 UBE2E2-ZNF385D 10 30 chr3:23217312:+ chr3:21665028:- FRAMESHIFT NA TCGA-2A-A8W1-01A-11R-A37L-07 ST7-PTPRZ1 7 28 chr7:116953691:+ chr7:121928156:+ INFRAME NA TCGA-2A-A8W1-01A-11R-A37L-07 FAM114A1-KCNIP4 3 15 chr4:38868546:+ chr4:21763032:- . NA TCGA-2A-A8W1-01A-11R-A37L-07 SMS-PPARGC1A 2 4 chrX:21940873:+ chr4:23884931:- FRAMESHIFT NA TCGA-2A-A8W1-01A-11R-A37L-07 ASTN2-CC2D1A 2 3 chr9:116725771:- chr19:13918070:+ INFRAME NA TCGA-2A-A8W1-01A-11R-A37L-07 TRMU-EMC1 1 5 chr22:46331732:+ chr1:19245030:- . NA TCGA-2A-A8W3-01A-11R-A37L-07 SLC45A3-ETV1 301 1142 chr1:205680394:- chr7:13939246:- . Likely Oncogenic NA TCGA-2A-A8W3-01A-11R-A37L-07 WIPF2-RAMP2 17 61 chr17:40219492:+ chr17:42758447:+ . NA TCGA-2A-A8W3-01A-11R-A37L-07 GATAD2B-KCNN3 14 53 chr1:153922733:- chr1:154772393:- . NA TCGA-2A-A8W3-01A-11R-A37L-07 ALG12-CDT1 11 56 chr22:49918263:- chr16:88807051:+ . NA TCGA-2A-A8W3-01A-11R-A37L-07 PER1-ENOPH1 4 29 chr17:8142649:- chr4:82447920:+ FRAMESHIFT NA TCGA-2A-A8W3-01A-11R-A37L-07 USP43-TMEM116 3 8 chr17:9656534:+ chr12:111934030:- INFRAME NA TCGA-2A-A8W3-01A-11R-A37L-07 DYNLL1-RNF10 3 0 chr12:120470104:+ chr12:120575631:+ . NA TCGA-2A-A8W3-01A-11R-A37L-07 GTF2IRD1-CCDC146 1 1 chr7:74454176:+ chr7:77167658:+ . NA TCGA-2A-AAYF-01A-11R-A41O-07 ATG2A-LBHD1 1 11 chr11:64896462:- chr11:62669803:- INFRAME NA TCGA-2A-AAYU-01A-11R-A41O-07 TMPRSS2-ERG 135 869 chr21:41494356:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-2A-AAYU-01A-11R-A41O-07 EP400NL-ATF7IP 3 13 chr12:132090943:+ chr12:14496231:+ . NA TCGA-2A-AAYU-01A-11R-A41O-07 VDAC2-NEO1 2 17 chr10:75211189:+ chr15:73116540:+ INFRAME NA TCGA-2A-AAYU-01A-11R-A41O-07 PGM1-SLC16A12 2 5 chr1:63593734:+ chr10:89462624:- . NA TCGA-2A-AAYU-01A-11R-A41O-07 ACP6-INTS7 1 5 chr1:147648246:- chr1:212017023:- FRAMESHIFT NA TCGA-2A-AAYU-01A-11R-A41O-07 TMEM178B-LHPP 1 5 chr7:141212704:+ chr10:124484139:+ FRAMESHIFT NA TCGA-4L-AA1F-01A-11R-A41O-07 TMPRSS2-ERG 25 90 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-4L-AA1F-01A-11R-A41O-07 SORBS2-MRPS35 21 62 chr4:185649467:- chr12:27755181:+ FRAMESHIFT NA TCGA-4L-AA1F-01A-11R-A41O-07 SPECC1L-CPNE4 6 48 chr22:24270983:+ chr3:132284170:- . NA TCGA-4L-AA1F-01A-11R-A41O-07 SLC9A9-PDLIM3 7 20 chr3:143795001:- chr4:185506652:- INFRAME NA TCGA-4L-AA1F-01A-11R-A41O-07 ACPP-BCR 3 11 chr3:132337554:+ chr22:23311697:+ FRAMESHIFT NA TCGA-4L-AA1F-01A-11R-A41O-07 C16orf74-ATAD1 1 5 chr16:85735190:- chr10:87792755:- FRAMESHIFT NA TCGA-CH-5737-01A-11R-1580-07 RAF1-AGGF1 3 20 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-CH-5737-01A-11R-1580-07 SMAP1-CGA 4 6 chr6:70773425:+ chr6:87088207:- . NA TCGA-CH-5737-01A-11R-1580-07 AGGF1-RAF1 1 6 chr5:77039719:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-CH-5737-01A-11R-1580-07 RSRP1-TRIP12 1 1 chr1:25245150:- chr2:229767750:- FRAMESHIFT NA TCGA-CH-5738-01A-11R-1580-07 SIRPA-CWF19L2 1 1 chr20:1934754:+ chr11:107392895:- INFRAME NA TCGA-CH-5739-01A-11R-1580-07 TMPRSS2-ERG 65 55 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5739-01A-11R-1580-07 CADM1-SORL1 3 11 chr11:115504271:- chr11:121553937:+ INFRAME NA TCGA-CH-5739-01A-11R-1580-07 ERG-PLEKHH1 2 10 chr21:38575662:- chr14:67555825:+ INFRAME Likely Oncogenic NA TCGA-CH-5739-01A-11R-1580-07 GPATCH8-PYY 1 13 chr17:44503326:- chr17:43966532:- . NA TCGA-CH-5739-01A-11R-1580-07 RTF1-EHD4 2 7 chr15:41457876:+ chr15:41953940:- INFRAME NA TCGA-CH-5739-01A-11R-1580-07 HLCS-KIAA1755 2 6 chr21:36896860:- chr20:38228240:- INFRAME NA TCGA-CH-5740-01A-11R-1580-07 TMPRSS2-ERG 17 87 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5740-01A-11R-1580-07 UHRF1BP1-RIOK1 16 40 chr6:34857917:+ chr6:7417331:+ INFRAME NA TCGA-CH-5740-01A-11R-1580-07 CPD-PIGW 11 34 chr17:30379726:+ chr17:36537094:+ . NA TCGA-CH-5740-01A-11R-1580-07 HNRNPH2-TMEM27 8 30 chrX:101412524:+ chrX:15639756:- INFRAME NA TCGA-CH-5740-01A-11R-1580-07 NFIA-CYP2J2 3 10 chr1:61088680:+ chr1:59893829:- INFRAME NA TCGA-CH-5740-01A-11R-1580-07 TPTE2P5-LMO7 2 12 chr13:40826506:- chr13:75836397:+ . NA TCGA-CH-5740-01A-11R-1580-07 FAM13B-CDC25C 2 6 chr5:138032782:- chr5:138292116:- . NA TCGA-CH-5740-01A-11R-1580-07 THRAP3-RPN1 2 6 chr1:36224505:+ chr3:128644983:- . NA TCGA-CH-5740-01A-11R-1580-07 CTPS2-TMSB15A 1 2 chrX:16667514:- chrX:102515180:- . NA TCGA-CH-5740-01A-11R-1580-07 HIST4H4-ERP27 1 2 chr12:14770679:- chr12:14917303:- . NA TCGA-CH-5741-01A-11R-1580-07 TMPRSS2-ERG 90 311 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-CH-5741-01A-11R-1580-07 TRIO-IQUB 27 75 chr5:14304592:+ chr7:123457566:- INFRAME NA TCGA-CH-5741-01A-11R-1580-07 ACPP-NPY 1 9 chr3:132356855:+ chr7:24291663:+ FRAMESHIFT NA TCGA-CH-5744-01A-11R-1580-07 TMPRSS2-ERG 79 100 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5744-01A-11R-1580-07 AFF4-DTWD2 15 60 chr5:132963259:- chr5:118848218:- . NA TCGA-CH-5744-01A-11R-1580-07 COX14-LIMA1 12 59 chr12:50112301:+ chr12:50192561:- . NA TCGA-CH-5744-01A-11R-1580-07 GFOD2-TMEM241 8 22 chr16:67719163:- chr18:23356663:- . NA TCGA-CH-5744-01A-11R-1580-07 DCAF5-RDH11 6 25 chr14:69116366:- chr14:67693052:- INFRAME NA TCGA-CH-5744-01A-11R-1580-07 ECSIT-RGL3 8 16 chr19:11513056:- chr19:11406864:- INFRAME NA TCGA-CH-5744-01A-11R-1580-07 NT5DC1-RDH11 4 32 chr6:116101023:+ chr14:67692593:- FRAMESHIFT NA TCGA-CH-5744-01A-11R-1580-07 PHF10-AFDN 9 11 chr6:169710236:- chr6:167925005:+ INFRAME NA TCGA-CH-5744-01A-11R-1580-07 DTWD2-AFF4 3 8 chr5:118928537:- chr5:132899141:- INFRAME NA TCGA-CH-5744-01A-11R-1580-07 EPHA7-PIGH 3 7 chr6:93356717:- chr14:67593952:- FRAMESHIFT NA TCGA-CH-5744-01A-11R-1580-07 ERG-CDHR2 3 3 chr21:38575662:- chr5:176565338:+ . Likely Oncogenic NA TCGA-CH-5744-01A-11R-1580-07 CDK19-AMD1 1 1 chr6:110667434:- chr6:110887505:+ FRAMESHIFT NA TCGA-CH-5746-01A-11R-1580-07 TMPRSS2-ERG 45 22 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5746-01A-11R-1580-07 UTRN-MSRA 1 9 chr6:144479982:+ chr8:10428148:+ INFRAME NA TCGA-CH-5748-01A-11R-1580-07 HIST4H4-LRP6 7 21 chr12:14770679:- chr12:12203400:- . NA TCGA-CH-5750-01A-11R-1580-07 TYW1-WBSCR17 3 17 chr7:67117618:+ chr7:71677211:+ INFRAME NA TCGA-CH-5750-01A-11R-1580-07 ACSL3-SGPP2 5 5 chr2:222861258:+ chr2:222521767:+ . NA TCGA-CH-5750-01A-11R-1580-07 SEC23B-KAT14 3 6 chr20:18515736:+ chr20:18181710:+ INFRAME NA TCGA-CH-5750-01A-11R-1580-07 KDM4A-CFAP57 2 1 chr1:43692311:+ chr1:43243227:+ FRAMESHIFT NA TCGA-CH-5750-01A-11R-1580-07 GNAQ-VEPH1 1 3 chr9:77794463:- chr3:157265662:- FRAMESHIFT NA TCGA-CH-5750-01A-11R-1580-07 TARS2-MRPS21 1 3 chr1:150490725:+ chr1:150308048:+ INFRAME NA TCGA-CH-5751-01A-11R-1580-07 ACSL3-SGPP2 15 22 chr2:222861258:+ chr2:222521767:+ . NA TCGA-CH-5751-01A-11R-1580-07 SEC23B-KAT14 15 22 chr20:18515736:+ chr20:18181710:+ INFRAME NA TCGA-CH-5751-01A-11R-1580-07 TARS2-MRPS21 10 12 chr1:150490725:+ chr1:150308048:+ INFRAME NA TCGA-CH-5751-01A-11R-1580-07 FOXK1-SDK1 3 9 chr7:4682868:+ chr7:3821450:+ INFRAME NA TCGA-CH-5751-01A-11R-1580-07 RPL23-BRD2 4 3 chr17:38852604:- chr6:32971595:+ FRAMESHIFT NA TCGA-CH-5751-01A-11R-1580-07 AP3B2-HOMER2 2 9 chr15:82709594:- chr15:82892841:- INFRAME NA TCGA-CH-5751-01A-11R-1580-07 KDM4A-CFAP57 1 12 chr1:43692311:+ chr1:43243227:+ FRAMESHIFT NA TCGA-CH-5751-01A-11R-1580-07 MIRLET7BHG-WNT7B 2 8 chr22:46053920:+ chr22:45950146:- . NA TCGA-CH-5751-01A-11R-1580-07 GNAQ-VEPH1 1 11 chr9:77794463:- chr3:157265662:- FRAMESHIFT NA TCGA-CH-5751-01A-11R-1580-07 ERCC6L2-ATP8A1 2 6 chr9:95956013:+ chr4:42524847:- INFRAME NA TCGA-CH-5751-01A-11R-1580-07 CCNG2-SLC4A4 2 3 chr4:77164479:+ chr4:71236576:+ INFRAME NA TCGA-CH-5751-01A-11R-1580-07 CMTM8-STT3B 1 5 chr3:32239119:+ chr3:31596798:+ INFRAME NA TCGA-CH-5751-01A-11R-1580-07 TCF7L1-MEX3D 1000 1000 chr19:1615286:- chr19:1556924:- . NA TCGA-CH-5752-01A-11R-1580-07 TMPRSS2-ERG 41 158 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5752-01A-11R-1580-07 NET1-ACSM3 6 30 chr10:5429229:+ chr16:20796370:+ INFRAME NA TCGA-CH-5752-01A-11R-1580-07 ZMIZ1-DENND2A 2 3 chr10:79216274:+ chr7:140602542:- . NA TCGA-CH-5754-01A-11R-1580-07 TMPRSS2-ERG 75 101 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5754-01A-11R-1580-07 SLC30A6-GNA11 15 50 chr2:32171373:+ chr19:3110149:+ FRAMESHIFT NA TCGA-CH-5754-01A-11R-1580-07 GNA11-SLC30A6 6 46 chr19:3094787:+ chr2:32175319:+ INFRAME NA TCGA-CH-5754-01A-11R-1580-07 TMEM268-GADD45GIP1 3 5 chr9:114617301:+ chr19:12954526:- FRAMESHIFT NA TCGA-CH-5761-01A-11R-1580-07 KMT2C-C7orf77 12 42 chr7:152195907:- chr7:124787872:- FRAMESHIFT Likely Oncogenic NA TCGA-CH-5761-01A-11R-1580-07 MAPT-RPL26 4 62 chr17:45962470:+ chr17:8382315:- . NA TCGA-CH-5761-01A-11R-1580-07 MAN2C1-MESP2 8 35 chr15:75356793:- chr15:89777148:+ FRAMESHIFT NA TCGA-CH-5761-01A-11R-1580-07 HMGN2P46-CASC21 4 12 chr15:45513963:+ chr8:127392504:+ . NA TCGA-CH-5762-01A-11R-1580-07 PMEPA1-ETV4 108 815 chr20:57709474:- chr17:43536479:- INFRAME NA TCGA-CH-5762-01A-11R-1580-07 DHX8-NKILA 20 80 chr17:43536479:+ chr20:57711324:+ . NA TCGA-CH-5762-01A-11R-1580-07 TMPRSS2-MORC3 18 32 chr21:41498119:- chr21:36333646:+ INFRAME Likely Oncogenic NA TCGA-CH-5762-01A-11R-1580-07 TLE3-CT62 1 5 chr15:70094532:- chr15:71111426:- INFRAME NA TCGA-CH-5763-01A-11R-1580-07 TMPRSS2-ETV4 35 9 chr21:41508081:- chr17:43545367:- . Likely Oncogenic NA TCGA-CH-5763-01A-11R-1580-07 TGM4-EEF2 1 26 chr3:44903987:+ chr19:3984350:- FRAMESHIFT NA TCGA-CH-5763-01A-11R-1580-07 AFF1-PAQR3 2 10 chr4:87094969:+ chr4:78887309:- . NA TCGA-CH-5763-01A-11R-1580-07 UTRN-EIF4G3 2 5 chr6:144789279:+ chr1:20813239:- FRAMESHIFT NA TCGA-CH-5763-01A-11R-1580-07 EIF4G3-SNX9 1 2 chr1:20817392:- chr6:157921531:+ FRAMESHIFT NA TCGA-CH-5764-01A-21R-1580-07 TMPRSS2-ERG 29 17 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5764-01A-21R-1580-07 ABCD3-DPYD 3 19 chr1:94491247:+ chr1:97515941:- INFRAME NA TCGA-CH-5764-01A-21R-1580-07 IRF2-ENPP6 4 12 chr4:184474379:- chr4:184124272:- . NA TCGA-CH-5765-01A-11R-1580-07 TMPRSS2-ERG 80 24 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5765-01A-11R-1580-07 SLC30A4-PDE2A 4 10 chr15:45511138:- chr11:72631139:- INFRAME NA TCGA-CH-5765-01A-11R-1580-07 LRRCC1-ZC2HC1A 3 9 chr8:85113099:+ chr8:78715221:+ FRAMESHIFT NA TCGA-CH-5766-01A-11R-1580-07 PLPP1-CDC20B 349 1831 chr5:55441851:- chr5:55146856:- INFRAME NA TCGA-CH-5766-01A-11R-1580-07 CAMK2G-NDUFA13 4 27 chr10:73815003:- chr19:19526182:+ . NA TCGA-CH-5766-01A-11R-1580-07 GATAD2B-NENF 3 13 chr1:153922733:- chr1:212442565:+ . NA TCGA-CH-5766-01A-11R-1580-07 MAP4K4-TSSK6 1 19 chr2:101698538:+ chr19:19512542:- . NA TCGA-CH-5766-01A-11R-1580-07 TRPM8-UGT1A6 1 15 chr2:233985865:+ chr2:233754690:+ . NA TCGA-CH-5766-01A-11R-1580-07 CACNA1C-DDX55 3 4 chr12:2601960:+ chr12:123619964:+ FRAMESHIFT NA TCGA-CH-5766-01A-11R-1580-07 VTI1A-SUGP2 1 3 chr10:112668998:+ chr19:19031082:- FRAMESHIFT NA TCGA-CH-5767-01A-11R-1789-07 AZIN1-ZFPM2 12 62 chr8:102858013:- chr8:105444280:+ . NA TCGA-CH-5767-01A-11R-1789-07 ZNF841-ZNF615 1000 1000 chr19:52088937:- chr19:52003900:- . NA TCGA-CH-5768-01A-11R-1580-07 TMPRSS2-ERG 32 37 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-CH-5768-01A-11R-1580-07 PEX14-HMOX2 13 70 chr1:10536297:+ chr16:4505484:+ INFRAME NA TCGA-CH-5768-01A-11R-1580-07 DHX8-MYO18A 6 18 chr17:43484185:+ chr17:29167021:- . NA TCGA-CH-5768-01A-11R-1580-07 MYO6-CADM2 2 4 chr6:75749423:+ chr3:85802047:+ . NA TCGA-CH-5769-01A-11R-1580-07 TMPRSS2-ERG 26 84 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5771-01A-21R-1580-07 EIF2AK4-BUB1B 24 166 chr15:40017242:+ chr15:40212499:+ INFRAME NA TCGA-CH-5771-01A-21R-1580-07 SERINC5-TTC39A 13 97 chr5:80166383:- chr1:51321825:- FRAMESHIFT NA TCGA-CH-5771-01A-21R-1580-07 TTC39A-CDC42 9 4 chr1:51330437:- chr1:22078429:+ . NA TCGA-CH-5771-01A-21R-1580-07 METTL13-EIF4G3 2 23 chr1:171784499:+ chr1:20904971:- INFRAME NA TCGA-CH-5771-01A-21R-1580-07 SERINC5-CDYL2 4 3 chr5:80255896:- chr16:80685129:- INFRAME NA TCGA-CH-5771-01A-21R-1580-07 OSBPL9-SERINC5 1 12 chr1:51617221:+ chr5:80158962:- FRAMESHIFT NA TCGA-CH-5771-01A-21R-1580-07 P4HA1-CTNNA3 2 4 chr10:73072029:- chr10:67539669:- INFRAME NA TCGA-CH-5771-01A-21R-1580-07 RPN2-RERE 1 8 chr20:37213865:+ chr1:8557523:- INFRAME NA TCGA-CH-5772-01A-11R-1580-07 MED12-RPL14 1000 1000 chrX:71141286:+ chr3:40462069:+ FRAMESHIFT Likely Oncogenic NA TCGA-CH-5788-01A-11R-1580-07 SEMA3D-RBM28 7 14 chr7:85153608:- chr7:128339791:- . NA TCGA-CH-5788-01A-11R-1580-07 APC-KIAA0825 3 5 chr5:112792529:+ chr5:94154124:- FRAMESHIFT Likely Oncogenic NA TCGA-CH-5788-01A-11R-1580-07 GPD2-GALNT5 2 6 chr2:156435804:+ chr2:157284282:+ . NA TCGA-CH-5788-01A-11R-1580-07 GPBP1L1-ZMPSTE24 1 5 chr1:45654543:- chr1:40267786:+ INFRAME NA TCGA-CH-5788-01A-11R-1580-07 FAM110B-SNTG1 1 3 chr8:58031703:+ chr8:50590879:+ . NA TCGA-CH-5789-01A-11R-1580-07 TMPRSS2-ERG 11 80 chr21:41494356:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-CH-5789-01A-11R-1580-07 ACPP-RDH11 1 7 chr3:132356855:+ chr14:67690421:- INFRAME NA TCGA-CH-5790-01A-11R-1580-07 TMPRSS2-ERG 61 51 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5790-01A-11R-1580-07 TMEM170A-USP22 1 3 chr16:75451738:- chr17:21028674:- FRAMESHIFT NA TCGA-CH-5791-01A-11R-1580-07 TMPRSS2-ERG 32 28 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5792-01A-11R-1580-07 CXADR-APP 123 653 chr21:17513172:+ chr21:26053348:- INFRAME NA TCGA-CH-5792-01A-11R-1580-07 TMTC3-LIN7A 5 56 chr12:88148504:+ chr12:80811683:- INFRAME NA TCGA-CH-5792-01A-11R-1580-07 CASP8-NRP2 8 15 chr2:201234112:+ chr2:205683091:+ . Likely Oncogenic NA TCGA-CH-5792-01A-11R-1580-07 PPM1A-PRKCH 5 4 chr14:60249677:+ chr14:61443111:+ . NA TCGA-CH-5792-01A-11R-1580-07 APOLD1-CREBL2 1 14 chr12:12814224:+ chr12:12635777:+ . NA TCGA-CH-5792-01A-11R-1580-07 DDX47-CREBL2 1 14 chr12:12814224:+ chr12:12635777:+ FRAMESHIFT NA TCGA-CH-5792-01A-11R-1580-07 DYNC2H1-CARD17 2 1 chr11:103358359:+ chr11:105099421:- FRAMESHIFT NA TCGA-CH-5792-01A-11R-1580-07 PLEKHB2-BIRC6 1 3 chr2:131140275:+ chr2:32490041:+ INFRAME NA TCGA-CH-5794-01A-11R-1580-07 TMPRSS2-ERG 59 76 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-CH-5794-01A-11R-1580-07 PUM2-FAM49A 1 10 chr2:20294376:- chr2:16588129:- . NA TCGA-CH-5794-01A-11R-1580-07 TAOK3-AGTPBP1 1 5 chr12:118372648:- chr9:85712566:- . NA TCGA-EJ-5495-01A-01R-1580-07 TMPRSS2-ERG 46 36 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5495-01A-01R-1580-07 SIK3-TMPRSS2 3 4 chr11:117098143:- chr21:41498189:- FRAMESHIFT Likely Oncogenic NA TCGA-EJ-5496-01A-01R-1580-07 TMPRSS2-ERG 67 39 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5496-01A-01R-1580-07 GOLPH3-SLC6A19 7 10 chr5:32173810:- chr5:1218903:+ INFRAME NA TCGA-EJ-5497-01A-02R-1580-07 TMPRSS2-ERG 25 112 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-5497-01A-02R-1580-07 TM9SF3-RPP30 12 11 chr10:96586734:- chr10:90895880:+ INFRAME NA TCGA-EJ-5497-01A-02R-1580-07 NCOA4-C10orf25 6 12 chr10:46030526:- chr10:45000416:- . NA TCGA-EJ-5497-01A-02R-1580-07 PDE4D-FGF14 5 13 chr5:60487942:- chr13:101726810:- . NA TCGA-EJ-5497-01A-02R-1580-07 RAF1-GXYLT2 3 9 chr3:12663813:- chr3:72908367:+ . Likely Oncogenic NA TCGA-EJ-5497-01A-02R-1580-07 INTS1-GET4 2 6 chr7:1470846:- chr7:890928:+ INFRAME NA TCGA-EJ-5497-01A-02R-1580-07 INTS1-SUN1 2 6 chr7:1470846:- chr7:890928:+ . NA TCGA-EJ-5497-01A-02R-1580-07 RPP30-PYHIN1 1 6 chr10:90903276:+ chr1:158973647:+ . NA TCGA-EJ-5497-01A-02R-1580-07 SNRNP200-NAALADL2 2 1 chr2:96305393:- chr3:175447229:+ INFRAME NA TCGA-EJ-5497-01A-02R-1580-07 SPATA13-MIPEP 1 4 chr13:24224582:+ chr13:23809924:- INFRAME NA TCGA-EJ-5498-01A-01R-1580-07 NDRG1-DACT3 15 186 chr8:133280231:- chr19:46653074:- . NA TCGA-EJ-5498-01A-01R-1580-07 TMPRSS2-ERG 19 12 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5498-01A-01R-1580-07 ASB7-DEXI 3 15 chr15:100612427:+ chr16:10929559:- . NA TCGA-EJ-5498-01A-01R-1580-07 PPARD-WDR27 2 17 chr6:35347150:+ chr6:169602321:- FRAMESHIFT NA TCGA-EJ-5498-01A-01R-1580-07 KLHL2-GALNTL6 1 9 chr4:165220059:+ chr4:172931161:+ FRAMESHIFT NA TCGA-EJ-5499-01A-01R-1580-07 TMPRSS2-ERG 49 133 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-5499-01A-01R-1580-07 PHF20-EPB41L1 9 47 chr20:35801605:+ chr20:36175551:+ FRAMESHIFT NA TCGA-EJ-5501-01A-01R-1580-07 PARP8-EIF5A2 11 25 chr5:50668125:+ chr3:170907093:- FRAMESHIFT NA TCGA-EJ-5501-01A-01R-1580-07 RARB-FAM19A4 1 3 chr3:25501323:+ chr3:68753018:- INFRAME NA TCGA-EJ-5502-01A-01R-1580-07 TMPRSS2-ERG 49 328 chr21:41488394:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-EJ-5502-01A-01R-1580-07 AFDN-CCDC162P 12 16 chr6:167902386:+ chr6:109348427:+ . NA TCGA-EJ-5503-01A-01R-1580-07 TEAD1-MICAL2 20 74 chr11:12675561:+ chr11:12208023:+ . NA TCGA-EJ-5503-01A-01R-1580-07 TMPRSS2-ERG 11 3 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5503-01A-01R-1580-07 COL2A1-ZNF609 1 5 chr12:48004237:- chr15:64622827:+ FRAMESHIFT NA TCGA-EJ-5505-01A-01R-1580-07 TMEM39A-EPHA6 10 17 chr3:119452447:- chr3:96987330:+ INFRAME NA TCGA-EJ-5506-01A-01R-1580-07 TMPRSS2-ERG 5 16 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-5506-01A-01R-1580-07 MGA-ZFAND6 1 3 chr15:41621298:+ chr15:80120328:+ . Likely Oncogenic NA TCGA-EJ-5506-01A-01R-1580-07 ANTXR2-CHMP1A 1 2 chr4:79977621:- chr16:89647331:- INFRAME NA TCGA-EJ-5507-01A-01R-1580-07 ATP11B-CARS 66 534 chr3:182845522:+ chr11:3005433:- INFRAME NA TCGA-EJ-5507-01A-01R-1580-07 TMPRSS2-ERG 55 49 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5507-01A-01R-1580-07 TBL1XR1-PIK3CA 10 17 chr3:177197121:- chr3:179198750:+ . NA TCGA-EJ-5507-01A-01R-1580-07 TMPRSS15-INTS8 5 4 chr21:18379283:- chr8:94831992:+ FRAMESHIFT NA TCGA-EJ-5507-01A-01R-1580-07 MSI2-CCDC178 2 10 chr17:57262192:+ chr18:33440081:- . NA TCGA-EJ-5507-01A-01R-1580-07 RPL5-GALNT18 1000 1000 chr1:92834913:+ chr11:11476452:- . NA TCGA-EJ-5508-01A-02R-1580-07 TMPRSS2-ERG 30 15 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5508-01A-02R-1580-07 TAB2-PCMT1 4 5 chr6:149318015:+ chr6:149789954:+ . NA TCGA-EJ-5508-01A-02R-1580-07 ZNF43-EFHB 1 6 chr19:21850938:- chr3:19920567:- . NA TCGA-EJ-5509-01A-01R-1580-07 TRAPPC9-JPH1 8 31 chr8:140023937:- chr8:74259503:- INFRAME NA TCGA-EJ-5509-01A-01R-1580-07 CAMKK2-KDM2B 2 31 chr12:121274056:- chr12:121494665:- INFRAME NA TCGA-EJ-5509-01A-01R-1580-07 SH3RF1-TLL1 2 14 chr4:169155480:- chr4:166025316:+ FRAMESHIFT NA TCGA-EJ-5509-01A-01R-1580-07 AGFG2-GJC3 4 3 chr7:100548915:+ chr7:99923603:- FRAMESHIFT NA TCGA-EJ-5509-01A-01R-1580-07 FOXP2-CAV2 1 12 chr7:114426679:+ chr7:116427322:+ . NA TCGA-EJ-5509-01A-01R-1580-07 DHCR24-ZCCHC11 2 3 chr1:54875093:- chr1:52423913:- FRAMESHIFT NA TCGA-EJ-5509-01A-01R-1580-07 AKAP9-CDK14 2 2 chr7:91941147:+ chr7:90563735:+ . NA TCGA-EJ-5510-01A-01R-1580-07 LUC7L2-ETV1 24 84 chr7:139360322:+ chr7:13939246:- INFRAME Likely Oncogenic NA TCGA-EJ-5510-01A-01R-1580-07 ADAM9-RGS20 5 28 chr8:38997160:+ chr8:53879258:+ FRAMESHIFT NA TCGA-EJ-5510-01A-01R-1580-07 BTAF1-PTPRR 1 9 chr10:91966757:+ chr12:70701323:- FRAMESHIFT NA TCGA-EJ-5510-01A-01R-1580-07 VWA8-COG5 2 4 chr13:41949936:- chr7:107362420:- INFRAME NA TCGA-EJ-5510-01A-01R-1580-07 COG5-CCDC122 2 3 chr7:107412502:- chr13:43874927:- . NA TCGA-EJ-5510-01A-01R-1580-07 CCDC122-LHFP 1 2 chr13:43874842:- chr13:39601390:- . NA TCGA-EJ-5511-01A-01R-1580-07 TM2D3-PTRF 175 915 chr15:101650004:- chr17:42405388:- INFRAME NA TCGA-EJ-5511-01A-01R-1580-07 STAT3-ETV4 118 455 chr17:42316789:- chr17:43533985:- INFRAME NA TCGA-EJ-5511-01A-01R-1580-07 CFAP97-AADAT 1 20 chr4:185190143:- chr4:170087248:- FRAMESHIFT NA TCGA-EJ-5511-01A-01R-1580-07 GSAP-AGK 1 2 chr7:77396982:- chr7:141601205:+ FRAMESHIFT NA TCGA-EJ-5511-01A-01R-1580-07 RPL32-ATP5G2 1 1 chr3:12841494:- chr12:53676398:- . NA TCGA-EJ-5512-01A-01R-1580-07 TMPRSS2-ERG 12 9 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5512-01A-01R-1580-07 NCAM2-CRYL1 6 29 chr21:20998618:+ chr13:20404741:- INFRAME NA TCGA-EJ-5512-01A-01R-1580-07 IKZF2-MICU2 4 5 chr2:213049713:- chr13:21495318:- INFRAME NA TCGA-EJ-5514-01A-01R-1580-07 PTPRD-C9orf92 12 16 chr9:8633317:- chr9:16215899:- INFRAME Likely Oncogenic NA TCGA-EJ-5514-01A-01R-1580-07 JMJD1C-RPL5 3 16 chr10:63380318:- chr1:92840551:+ INFRAME NA TCGA-EJ-5514-01A-01R-1580-07 RBM39-WFDC13 3 16 chr20:35713019:- chr20:45704444:+ INFRAME NA TCGA-EJ-5514-01A-01R-1580-07 ATP9A-TRPC4AP 2 6 chr20:51768302:- chr20:35035308:- FRAMESHIFT NA TCGA-EJ-5514-01A-01R-1580-07 HKR1-FECH 2 6 chr19:37347872:+ chr18:57551374:- INFRAME NA TCGA-EJ-5514-01A-01R-1580-07 ARMC8-TF 1 5 chr3:138187599:+ chr3:133764182:+ INFRAME NA TCGA-EJ-5515-01A-01R-1580-07 SNHG4-KDM3B 9 43 chr5:139278408:+ chr5:138391013:+ . NA TCGA-EJ-5515-01A-01R-1580-07 BLVRA-SUGCT 6 2 chr7:43758734:+ chr7:40860316:+ . NA TCGA-EJ-5515-01A-01R-1580-07 WTAP-SOCS2 1 8 chr6:159739045:+ chr12:93572685:+ . NA TCGA-EJ-5515-01A-01R-1580-07 SAFB2-KHSRP 1 4 chr19:5616132:- chr19:6418079:- INFRAME NA TCGA-EJ-5515-01A-01R-1580-07 ERLEC1-ACYP2 1 3 chr2:53801842:+ chr2:54304688:+ FRAMESHIFT NA TCGA-EJ-5516-01A-01R-1580-07 TMPRSS2-ERG 84 45 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5516-01A-01R-1580-07 EEA1-UBL3 23 29 chr12:92787867:- chr13:29777263:- INFRAME NA TCGA-EJ-5516-01A-01R-1580-07 MRPS27-HIST1H2BN 7 24 chr5:72314081:- chr6:27841564:+ FRAMESHIFT NA TCGA-EJ-5516-01A-01R-1580-07 MFAP1-STRC 4 10 chr15:43812987:- chr15:43605399:- INFRAME NA TCGA-EJ-5516-01A-01R-1580-07 ING2-IDH1 3 10 chr4:183505367:+ chr2:208255589:- . NA TCGA-EJ-5516-01A-01R-1580-07 HGD-CACNA1D 1 11 chr3:120670427:- chr3:53743011:+ INFRAME NA TCGA-EJ-5516-01A-01R-1580-07 UTRN-SLC22A23 2 7 chr6:144577288:+ chr6:3324002:- FRAMESHIFT NA TCGA-EJ-5516-01A-01R-1580-07 GPATCH8-MEOX1 1 10 chr17:44503326:- chr17:43661393:- INFRAME NA TCGA-EJ-5516-01A-01R-1580-07 COPB1-TLDC2 1000 1000 chr11:14481050:- chr20:36876121:+ . NA TCGA-EJ-5518-01A-01R-1580-07 HNRNPUL1-SLC8A2 49 111 chr19:41281275:+ chr19:47457594:- INFRAME NA TCGA-EJ-5518-01A-01R-1580-07 TOR1AIP2-IFI16 28 150 chr1:179877239:- chr1:159049432:+ . NA TCGA-EJ-5518-01A-01R-1580-07 USF1-UCK2 26 131 chr1:161045858:- chr1:165896190:+ . NA TCGA-EJ-5518-01A-01R-1580-07 STX6-PRRC2C 10 69 chr1:181002606:- chr1:171591587:+ INFRAME NA TCGA-EJ-5518-01A-01R-1580-07 EDEM3-HHAT 14 50 chr1:184708153:- chr1:210674288:+ FRAMESHIFT NA TCGA-EJ-5518-01A-01R-1580-07 RASAL2-RABGAP1L 10 57 chr1:178390206:+ chr1:174231145:+ FRAMESHIFT NA TCGA-EJ-5518-01A-01R-1580-07 SUCO-RASAL2 10 50 chr1:172551626:+ chr1:178390100:+ FRAMESHIFT NA TCGA-EJ-5518-01A-01R-1580-07 GPR89B-FCGR2C 3 59 chr1:147928578:+ chr1:161581371:+ . NA TCGA-EJ-5518-01A-01R-1580-07 C1orf132-SMYD3 7 30 chr1:207815929:- chr1:245764149:- . NA TCGA-EJ-5518-01A-01R-1580-07 CHRM3-SYT14 3 45 chr1:239632286:+ chr1:210094322:+ . NA TCGA-EJ-5518-01A-01R-1580-07 SMYD3-COPA 2 28 chr1:245764041:- chr1:160335322:- INFRAME NA TCGA-EJ-5518-01A-01R-1580-07 CEP350-GPR161 2 17 chr1:179955142:+ chr1:168104894:- FRAMESHIFT NA TCGA-EJ-5518-01A-01R-1580-07 POU2F1-RPRD2 2 17 chr1:167220958:+ chr1:150440923:+ FRAMESHIFT NA TCGA-EJ-5518-01A-01R-1580-07 PPP2R5A-CHRM3 1 21 chr1:212286291:+ chr1:239492709:+ . NA TCGA-EJ-5518-01A-01R-1580-07 PIP5K1A-ITLN1 1 19 chr1:151232365:+ chr1:160884883:- . NA TCGA-EJ-5518-01A-01R-1580-07 ASH1L-NSL1 2 14 chr1:155521100:- chr1:212787637:- INFRAME NA TCGA-EJ-5518-01A-01R-1580-07 CDC73-KIFAP3 1 5 chr1:193212477:+ chr1:170039288:- FRAMESHIFT NA TCGA-EJ-5518-01A-01R-1580-07 MEF2D-ADAMTS4 1 4 chr1:156500486:- chr1:161196880:- . NA TCGA-EJ-5518-01A-01R-1580-07 TUFT1-ZBTB18 1000 1000 chr1:151540426:+ chr1:244053788:+ FRAMESHIFT NA TCGA-EJ-5519-01A-01R-1580-07 SKIV2L2-SCCPDH 24 167 chr5:55416132:+ chr1:246726892:+ INFRAME NA TCGA-EJ-5519-01A-01R-1580-07 C1orf132-CHRM3 4 55 chr1:207867926:- chr1:239907433:+ . NA TCGA-EJ-5519-01A-01R-1580-07 CDK14-DLD 5 31 chr7:90604249:+ chr7:107901738:+ FRAMESHIFT NA TCGA-EJ-5519-01A-01R-1580-07 ARHGAP29-DNAJC6 3 34 chr1:94231407:- chr1:65364635:+ INFRAME NA TCGA-EJ-5519-01A-01R-1580-07 TNPO1-ENC1 3 19 chr5:72872720:+ chr5:74637618:- . NA TCGA-EJ-5519-01A-01R-1580-07 SCYL3-PDZRN4 1 18 chr1:169862613:- chr12:41506456:+ INFRAME NA TCGA-EJ-5519-01A-01R-1580-07 NFXL1-ERAP2 2 6 chr4:47875127:- chr5:96879564:+ . NA TCGA-EJ-5519-01A-01R-1580-07 PRPS1-NCBP2L 1000 1000 chrX:107647765:+ chrX:107794149:+ . NA TCGA-EJ-5521-01A-01R-1580-07 GSR-RBPMS 63 143 chr8:30727530:- chr8:30558887:+ INFRAME NA TCGA-EJ-5521-01A-01R-1580-07 TMPRSS2-ERG 33 198 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-5521-01A-01R-1580-07 PICALM-GLYATL1P2 2 39 chr11:86068651:- chr11:58884906:+ . NA TCGA-EJ-5521-01A-01R-1580-07 UGGT2-ANKRD16 1 18 chr13:96053155:- chr10:5862691:- . NA TCGA-EJ-5522-01A-01R-1580-07 TMPRSS2-ERG 40 46 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-EJ-5522-01A-01R-1580-07 GPAT4-ADAM9 25 43 chr8:41599304:+ chr8:39041946:+ FRAMESHIFT NA TCGA-EJ-5522-01A-01R-1580-07 TUBGCP2-UBE4A 3 6 chr10:133302792:- chr11:118390657:+ FRAMESHIFT NA TCGA-EJ-5524-01A-01R-1580-07 TMPRSS2-ERG 72 52 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5524-01A-01R-1580-07 MLYCD-MGRN1 4 44 chr16:83912367:+ chr16:4668265:+ INFRAME NA TCGA-EJ-5524-01A-01R-1580-07 AMMECR1L-TNFRSF10C 3 26 chr2:127884203:- chr8:23111720:+ . NA TCGA-EJ-5524-01A-01R-1580-07 RAD17-SEC24A 6 14 chr5:69374711:+ chr5:134715024:+ INFRAME NA TCGA-EJ-5524-01A-01R-1580-07 PPM1H-FAM234B 5 11 chr12:62737502:- chr12:13061575:+ FRAMESHIFT NA TCGA-EJ-5524-01A-01R-1580-07 LCOR-CC2D2B 4 13 chr10:96833479:+ chr10:95922016:+ . NA TCGA-EJ-5524-01A-01R-1580-07 OR51E2-RRM1 4 9 chr11:4697653:- chr11:4101993:+ . NA TCGA-EJ-5524-01A-01R-1580-07 CORO7-CLEC16A 2 13 chr16:4412356:- chr16:11020193:+ INFRAME NA TCGA-EJ-5525-01A-01R-1580-07 TMPRSS2-ERG 24 94 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5525-01A-01R-1580-07 TP53-KIAA0753 13 55 chr17:7687377:- chr17:6595053:- . Likely Oncogenic NA TCGA-EJ-5525-01A-01R-1580-07 WLS-TBX3 7 13 chr1:68137780:- chr12:114672302:- FRAMESHIFT NA TCGA-EJ-5525-01A-01R-1580-07 PAK2-PIGX 8 5 chr3:196740157:+ chr3:196716858:+ . NA TCGA-EJ-5525-01A-01R-1580-07 DOPEY2-ELF2 3 16 chr21:36200501:+ chr4:139062057:- FRAMESHIFT NA TCGA-EJ-5525-01A-01R-1580-07 MESDC2-TMPRSS2 3 7 chr15:80978766:- chr21:41470743:- . Likely Oncogenic NA TCGA-EJ-5525-01A-01R-1580-07 ABCB8-IQCA1L 1 14 chr7:151028610:+ chr7:151192829:- INFRAME NA TCGA-EJ-5525-01A-01R-1580-07 CLN6-ALDH1A2 2 4 chr15:68218536:- chr15:58166796:- . NA TCGA-EJ-5525-01A-01R-1580-07 FRMD4A-MCM10 2 2 chr10:13858847:- chr10:13172376:+ FRAMESHIFT NA TCGA-EJ-5526-01A-01R-1580-07 TMPRSS2-ERG 64 289 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5526-01A-01R-1580-07 FAM110B-DIABLO 10 77 chr8:57994806:+ chr12:122218397:- . NA TCGA-EJ-5526-01A-01R-1580-07 TMPRSS2-DIAPH1 4 7 chr21:41470648:- chr5:141534433:- INFRAME Likely Oncogenic NA TCGA-EJ-5526-01A-01R-1580-07 FGF13-CSE1L 1 2 chrX:139204059:- chr20:49067190:+ FRAMESHIFT NA TCGA-EJ-5527-01A-01R-1580-07 TMPRSS2-ERG 73 31 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5527-01A-01R-1580-07 NDUFS3-ERO1B 16 34 chr11:47582468:+ chr1:236218576:- FRAMESHIFT NA TCGA-EJ-5527-01A-01R-1580-07 RBPJ-C16orf46 3 14 chr4:26415640:+ chr16:81054094:- INFRAME NA TCGA-EJ-5527-01A-01R-1580-07 PUM1-SDCCAG8 2 17 chr1:31028796:- chr1:243330540:+ INFRAME NA TCGA-EJ-5527-01A-01R-1580-07 C16orf46-RBPJ 1 8 chr16:81061206:- chr4:26420551:+ INFRAME NA TCGA-EJ-5527-01A-01R-1580-07 EZR-ZNF596 1 7 chr6:158818082:- chr8:240824:+ . NA TCGA-EJ-5530-01A-01R-1580-07 TMPRSS2-ERG 57 303 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-5530-01A-01R-1580-07 CENPN-C16orf62 6 55 chr16:81020276:+ chr16:19633092:+ INFRAME NA TCGA-EJ-5530-01A-01R-1580-07 NAA60-IST1 3 29 chr16:3447620:+ chr16:71915626:+ . NA TCGA-EJ-5532-01A-01R-1580-07 SAE1-BAX 35 130 chr19:47143605:+ chr19:48960810:+ INFRAME NA TCGA-EJ-5532-01A-01R-1580-07 BAX-WRAP53 12 95 chr19:48956333:+ chr17:7686634:+ . NA TCGA-EJ-5532-01A-01R-1580-07 FKBP5-VPS54 10 50 chr6:35575749:- chr2:63897590:- . NA TCGA-EJ-5532-01A-01R-1580-07 MRPL30-CCDC57 12 12 chr2:99181249:+ chr17:82157948:- . NA TCGA-EJ-5542-01A-01R-1580-07 TMPRSS2-ERG 56 20 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-5542-01A-01R-1580-07 CCDC186-DCLRE1A 4 9 chr10:114174015:- chr10:113853847:- . NA TCGA-EJ-5542-01A-01R-1580-07 ARRDC3-SGCD 1 3 chr5:91376621:- chr5:156344489:+ INFRAME NA TCGA-EJ-5542-01A-01R-1580-07 CMTM4-PLA2G15 1 2 chr16:66622062:- chr16:68259146:+ INFRAME NA TCGA-EJ-7123-01A-11R-1965-07 GALNT7-SPCS3 1 39 chr4:173248440:+ chr4:176322170:+ INFRAME NA TCGA-EJ-7125-01A-11R-1965-07 SPON2-EEF2 1 10 chr4:1207880:- chr19:3984350:- . NA TCGA-EJ-7125-01A-11R-1965-07 RPS15-DLGAP5 1 3 chr19:1438892:+ chr14:55150848:- INFRAME NA TCGA-EJ-7125-01A-11R-1965-07 ANTXR2-CHMP1A 1 1 chr4:79977621:- chr16:89647331:- INFRAME NA TCGA-EJ-7218-01B-11R-A32O-07 MINDY4-SUGCT 1 7 chr7:30771556:+ chr7:40684056:+ INFRAME NA TCGA-EJ-7218-01B-11R-A32O-07 FBXO31-USP10 1 1 chr16:87383405:- chr16:84764086:+ INFRAME NA TCGA-EJ-7314-01A-31R-2118-07 NDRG1-ERG 47 229 chr8:133280235:- chr21:38445624:- . Likely Oncogenic NA TCGA-EJ-7314-01A-31R-2118-07 IDE-CAMK1D 3 15 chr10:92483255:- chr10:12760948:+ INFRAME NA TCGA-EJ-7314-01A-31R-2118-07 OXR1-KB-1562D12.1 2 12 chr8:106658185:+ chr8:101461617:- . NA TCGA-EJ-7315-01A-31R-2118-07 TMPRSS2-ERG 11 113 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7315-01A-31R-2118-07 YBX3-MRPL42 9 92 chr12:10722850:- chr12:93501176:+ FRAMESHIFT NA TCGA-EJ-7315-01A-31R-2118-07 MICAL3-ATAD1 3 22 chr22:18001393:- chr10:87814612:- . NA TCGA-EJ-7315-01A-31R-2118-07 TRIP12-PID1 1000 1000 chr2:229777315:- chr2:228850648:- . NA TCGA-EJ-7317-01A-31R-2118-07 C2orf76-MARCO 2 3 chr2:119339827:- chr2:118982156:+ INFRAME NA TCGA-EJ-7318-01B-11R-A32O-07 SLC9A3R1-FBXO18 8 31 chr17:74749287:+ chr10:5936456:+ INFRAME NA TCGA-EJ-7318-01B-11R-A32O-07 TMEM104-LIN52 8 26 chr17:74777375:+ chr14:74091232:+ FRAMESHIFT NA TCGA-EJ-7318-01B-11R-A32O-07 VIPAS39-BBOF1 3 12 chr14:77433842:- chr14:74078196:+ . NA TCGA-EJ-7318-01B-11R-A32O-07 TMEFF2-CHMP1A 1 1 chr2:192179668:- chr16:89647331:- FRAMESHIFT NA TCGA-EJ-7321-01A-31R-2263-07 TMPRSS2-ERG 126 62 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7321-01A-31R-2263-07 PPP1R21-DNAH6 10 55 chr2:48465642:+ chr2:84819305:+ FRAMESHIFT NA TCGA-EJ-7321-01A-31R-2263-07 DHCR24-FKBP5 5 16 chr1:54875093:- chr6:35587117:- INFRAME NA TCGA-EJ-7321-01A-31R-2263-07 HNRNPUL1-ATG10 3 13 chr19:41294686:+ chr5:82252562:+ INFRAME NA TCGA-EJ-7321-01A-31R-2263-07 PTPRG-CADPS 3 3 chr3:61562372:+ chr3:62592748:- FRAMESHIFT NA TCGA-EJ-7321-01A-31R-2263-07 ANKRD11-PSMB1 2 3 chr16:89490245:- chr6:170549113:- . NA TCGA-EJ-7321-01A-31R-2263-07 ITGB1-WDFY4 2 2 chr10:32958145:- chr10:48897454:+ . NA TCGA-EJ-7321-01A-31R-2263-07 C1orf174-SNAP47 1 3 chr1:3900172:- chr1:227758995:+ FRAMESHIFT NA TCGA-EJ-7325-01B-11R-A32O-07 TMPRSS2-ERG 77 42 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7325-01B-11R-A32O-07 MBOAT2-ADI1 23 74 chr2:9003540:- chr2:3500993:- INFRAME NA TCGA-EJ-7325-01B-11R-A32O-07 DNAJC7-SCGB2A2 1 5 chr17:41990264:- chr11:62272957:+ FRAMESHIFT NA TCGA-EJ-7327-01A-11R-2118-07 TMPRSS2-ERG 41 292 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-7327-01A-11R-2118-07 GPBP1-MTRR 12 73 chr5:57231321:+ chr5:7889095:+ INFRAME NA TCGA-EJ-7327-01A-11R-2118-07 ERG-SKOR2 1 6 chr21:38575662:- chr18:47249230:- . Likely Oncogenic NA TCGA-EJ-7327-01A-11R-2118-07 PDK3-CADPS 1 4 chrX:24498900:+ chr3:62662394:- FRAMESHIFT NA TCGA-EJ-7327-01A-11R-2118-07 GNPDA1-RNGTT 1 3 chr5:142004932:- chr6:88906440:- FRAMESHIFT NA TCGA-EJ-7328-01A-31R-2118-07 PPP2R2A-MTUS1 14 62 chr8:26293740:+ chr8:17647079:- FRAMESHIFT NA TCGA-EJ-7328-01A-31R-2118-07 TMPRSS2-ERG 19 19 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7328-01A-31R-2118-07 CGRRF1-WDHD1 1 21 chr14:54510063:+ chr14:54984860:- FRAMESHIFT NA TCGA-EJ-7328-01A-31R-2118-07 ALDH1A3-USP25 1000 1000 chr15:100915274:+ chr21:15833348:+ . NA TCGA-EJ-7330-01A-11R-2118-07 COL11A1-DPH5 4 20 chr1:102886910:- chr1:101026061:- . NA TCGA-EJ-7330-01A-11R-2118-07 ATP8B4-OCA2 4 9 chr15:49876278:- chr15:28081895:- . NA TCGA-EJ-7330-01A-11R-2118-07 CADPS2-DNAH11 3 4 chr7:122393441:- chr7:21615114:+ FRAMESHIFT NA TCGA-EJ-7781-01A-11R-2118-07 UBE2D3-CA10 30 349 chr4:102826485:- chr17:51649254:- INFRAME NA TCGA-EJ-7781-01A-11R-2118-07 GNG4-SH3D19 9 13 chr1:235649662:- chr4:151165696:- . NA TCGA-EJ-7781-01A-11R-2118-07 DHRS4-MANBA 1 8 chr14:23953916:+ chr4:102726683:- FRAMESHIFT NA TCGA-EJ-7782-01A-11R-2118-07 LYPD6B-LRBA 7 26 chr2:149119163:+ chr4:150798142:- . NA TCGA-EJ-7782-01A-11R-2118-07 IL1RAPL2-STK39 5 15 chrX:105234004:+ chr2:167964726:- FRAMESHIFT NA TCGA-EJ-7782-01A-11R-2118-07 TXNDC5-RREB1 3 20 chr6:7895106:- chr6:7176655:+ . NA TCGA-EJ-7782-01A-11R-2118-07 PKHD1-CAGE1 4 5 chr6:52010309:- chr6:7334090:- FRAMESHIFT NA TCGA-EJ-7782-01A-11R-2118-07 PKHD1-SSR1 4 3 chr6:52010309:- chr6:7334090:- . NA TCGA-EJ-7782-01A-11R-2118-07 KLHL23-PTCHD3P2 1 8 chr2:169697531:+ chr2:169767302:- . NA TCGA-EJ-7783-01A-11R-2118-07 TMPRSS2-ERG 34 72 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7783-01A-11R-2118-07 CCAR2-CERNA1 5 21 chr8:22606176:+ chr15:52204889:+ . NA TCGA-EJ-7783-01A-11R-2118-07 LEO1-FBN1 5 14 chr15:51971688:- chr15:48537808:- INFRAME NA TCGA-EJ-7783-01A-11R-2118-07 IREB2-LEO1 4 6 chr15:78488771:+ chr15:51966504:- FRAMESHIFT NA TCGA-EJ-7783-01A-11R-2118-07 GSK3B-ARNT 1 5 chr3:119863419:- chr1:150818030:- FRAMESHIFT NA TCGA-EJ-7784-01A-11R-2118-07 TMPRSS2-ATF7IP 197 894 chr21:41498119:- chr12:14460495:+ FRAMESHIFT Likely Oncogenic NA TCGA-EJ-7784-01A-11R-2118-07 ATF7IP-TMPRSS2 35 127 chr12:14457295:+ chr21:41489593:- INFRAME Likely Oncogenic NA TCGA-EJ-7784-01A-11R-2118-07 TMPRSS2-ERG 20 142 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-EJ-7784-01A-11R-2118-07 RLF-GPATCH8 7 25 chr1:40161636:+ chr17:44474903:- INFRAME NA TCGA-EJ-7784-01A-11R-2118-07 SDE2-SLC22A15 3 9 chr1:225995266:- chr1:116019582:+ FRAMESHIFT NA TCGA-EJ-7784-01A-11R-2118-07 CDC14A-PGM1 1 6 chr1:100455492:+ chr1:63648517:+ INFRAME NA TCGA-EJ-7784-01A-11R-2118-07 GPATCH8-ZMYM4 1 4 chr17:44503326:- chr1:35295927:+ . NA TCGA-EJ-7785-01A-11R-2118-07 TMPRSS2-ERG 38 77 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-EJ-7785-01A-11R-2118-07 MAPRE1-USP28 7 52 chr20:32839856:+ chr11:113834335:- INFRAME NA TCGA-EJ-7785-01A-11R-2118-07 DENND4C-RHOBTB2 3 10 chr9:19357154:+ chr8:23004425:+ INFRAME NA TCGA-EJ-7785-01A-11R-2118-07 SATB1-STAC 1 13 chr3:18378170:- chr3:36443364:+ INFRAME NA TCGA-EJ-7785-01A-11R-2118-07 PLEKHA7-MMP9 1 10 chr11:16851191:- chr20:46009866:+ INFRAME NA TCGA-EJ-7785-01A-11R-2118-07 TET1-EFHC2 1 8 chr10:68682973:+ chrX:44312756:- INFRAME Likely Oncogenic NA TCGA-EJ-7788-01A-11R-2118-07 ITPR2-CLEC2A 14 60 chr12:26550247:- chr12:9922232:- FRAMESHIFT NA TCGA-EJ-7788-01A-11R-2118-07 CLEC12A-CLEC2A 3 5 chr12:9971687:+ chr12:9916803:- FRAMESHIFT NA TCGA-EJ-7789-01A-11R-2118-07 MAPK9-DGKB 11 54 chr5:180264781:- chr7:14621494:- FRAMESHIFT NA TCGA-EJ-7789-01A-11R-2118-07 SMYD3-TRIM58 4 13 chr1:246327201:- chr1:247860617:+ INFRAME NA TCGA-EJ-7789-01A-11R-2118-07 TMEM56-SNX7 2 16 chr1:95151419:+ chr1:98760054:+ INFRAME NA TCGA-EJ-7789-01A-11R-2118-07 SNAP91-BCKDHB 3 10 chr6:83575010:- chr6:80273135:+ INFRAME NA TCGA-EJ-7789-01A-11R-2118-07 BCKDHB-ME1 3 5 chr6:80203212:+ chr6:83407901:- INFRAME NA TCGA-EJ-7791-01A-11R-2118-07 DLGAP1-ARHGAP28 3 17 chr18:4455006:- chr18:6824762:+ . NA TCGA-EJ-7791-01A-11R-2118-07 CADM2-ROBO1 3 7 chr3:84959668:+ chr3:78627569:- FRAMESHIFT NA TCGA-EJ-7792-01A-11R-2118-07 MBNL1-NMNAT3 8 79 chr3:152269092:+ chr3:139579055:- . NA TCGA-EJ-7792-01A-11R-2118-07 MIGA1-PIGU 1 5 chr1:77783351:+ chr20:34637985:- INFRAME NA TCGA-EJ-7793-01A-31R-2263-07 TMPRSS2-ERG 21 93 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7793-01A-31R-2263-07 ERG-TMPRSS2 2 13 chr21:38575662:- chr21:41494578:- INFRAME Oncogenic NA TCGA-EJ-7793-01A-31R-2263-07 LIMCH1-DNM1L 1 10 chr4:41360936:+ chr12:32722427:+ FRAMESHIFT NA TCGA-EJ-7794-01A-11R-2118-07 HBS1L-IL9 23 171 chr6:135050582:- chr5:135892510:- FRAMESHIFT NA TCGA-EJ-7794-01A-11R-2118-07 PDLIM3-ENPP6 1 3 chr4:185535342:- chr4:184153733:- FRAMESHIFT NA TCGA-EJ-7794-01A-11R-2118-07 RABEP2-SRCAP 1 1 chr16:28919786:- chr16:30728966:+ INFRAME NA TCGA-EJ-7797-01A-11R-2263-07 TMPRSS2-ERG 114 64 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-7797-01A-11R-2263-07 PIGZ-PRPSAP2 8 1 chr3:196968687:- chr17:18889822:+ . NA TCGA-EJ-7797-01A-11R-2263-07 ERG-TAF8 2 6 chr21:38575662:- chr6:42051357:+ INFRAME Likely Oncogenic NA TCGA-EJ-8468-01A-21R-2403-07 PRCP-RAB30 5 11 chr11:82900235:- chr11:82994122:- INFRAME NA TCGA-EJ-8468-01A-21R-2403-07 CYP39A1-FGGY 1 8 chr6:46642163:- chr1:59757931:+ FRAMESHIFT NA TCGA-EJ-8469-01A-11R-2403-07 TMPRSS2-MRPS6 180 662 chr21:41473325:- chr21:34125341:+ FRAMESHIFT Likely Oncogenic NA TCGA-EJ-8469-01A-11R-2403-07 KDM6A-ARHGAP6 20 63 chrX:45059466:+ chrX:11254707:- INFRAME Likely Oncogenic NA TCGA-EJ-8469-01A-11R-2403-07 GOLIM4-ZBBX 12 37 chr3:168095099:- chr3:167282495:- INFRAME NA TCGA-EJ-8469-01A-11R-2403-07 TBL1XR1-ADAM33 7 47 chr3:177197121:- chr20:3677143:- . NA TCGA-EJ-8469-01A-11R-2403-07 SHTN1-DZANK1 6 38 chr10:117005022:- chr20:18415449:- FRAMESHIFT NA TCGA-EJ-8469-01A-11R-2403-07 BRD4-AKAP8L 5 9 chr19:15332290:- chr19:15404042:- . Oncogenic NA TCGA-EJ-8469-01A-11R-2403-07 ARHGAP6-KDM6A 2 12 chrX:11427548:- chrX:45061324:+ . Likely Oncogenic NA TCGA-EJ-8469-01A-11R-2403-07 HK1-CTNNA3 2 11 chr10:69319010:+ chr10:66775524:- INFRAME NA TCGA-EJ-8469-01A-11R-2403-07 DTD1-KIF16B 3 6 chr20:18628233:+ chr20:16515664:- INFRAME NA TCGA-EJ-8469-01A-11R-2403-07 TMPRSS2-ERG 1000 1000 chr21:41508085:- chr21:38445625:- . Oncogenic NA TCGA-EJ-8470-01A-11R-2403-07 NEDD4L-ZC3H7A 28 132 chr18:58252054:+ chr16:11782388:- . NA TCGA-EJ-8470-01A-11R-2403-07 NEDD4L-BCAR4 15 92 chr18:58252054:+ chr16:11828391:- . NA TCGA-EJ-8470-01A-11R-2403-07 AMBRA1-TRPC6 9 18 chr11:46593828:- chr11:101504798:- . NA TCGA-EJ-8470-01A-11R-2403-07 FRYL-CNGA1 1 8 chr4:48684673:- chr4:48010893:- . NA TCGA-EJ-8472-01A-11R-2403-07 TMPRSS2-ERG 57 56 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-8472-01A-11R-2403-07 SORL1-NEK4 25 167 chr11:121612832:+ chr3:52709935:- . NA TCGA-EJ-8474-01A-11R-2403-07 TMPRSS2-SARS 45 240 chr21:41488394:- chr1:109223978:+ INFRAME Likely Oncogenic NA TCGA-EJ-8474-01A-11R-2403-07 FAM13C-S100P 36 173 chr10:59352270:- chr4:6696893:+ INFRAME NA TCGA-EJ-8474-01A-11R-2403-07 TCEA3-PRR16 1 14 chr1:23417249:- chr5:120685954:+ FRAMESHIFT NA TCGA-EJ-8474-01A-11R-2403-07 GSTO1-INA 2 1 chr10:104263077:+ chr10:103287035:+ INFRAME NA TCGA-EJ-A46B-01A-31R-A250-07 CAMKK2-KDM2B 3 3 chr12:121269528:- chr12:121494665:- INFRAME NA TCGA-EJ-A46D-01A-21R-A32Y-07 TMPRSS2-ERG 54 24 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-A46D-01A-21R-A32Y-07 ACPP-ARFIP1 1 4 chr3:132317576:+ chr4:152863606:+ INFRAME NA TCGA-EJ-A46E-01A-31R-A250-07 ACTN4-MGST2 2 6 chr19:38647907:+ chr4:139695197:+ FRAMESHIFT NA TCGA-EJ-A46F-01A-31R-A250-07 TMPRSS2-ERG 11 14 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-A46F-01A-31R-A250-07 CSGALNACT1-TMEM150A 7 26 chr8:19458426:- chr2:85599702:- FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 ADGRL2-AK5 54 189 chr1:81837057:+ chr1:77293793:+ INFRAME NA TCGA-EJ-A46G-01A-31R-A26U-07 EEF2-SLC25A23 26 259 chr19:3983110:- chr19:6436464:- INFRAME NA TCGA-EJ-A46G-01A-31R-A26U-07 FRYL-OCIAD2 14 179 chr4:48684673:- chr4:48885565:- . NA TCGA-EJ-A46G-01A-31R-A26U-07 FAM160B1-VTI1A 10 35 chr10:114836246:+ chr10:112668218:+ FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 PAK1-NARS2 8 29 chr11:77473552:- chr11:78571444:- . NA TCGA-EJ-A46G-01A-31R-A26U-07 ROCK2-NTSR2 4 30 chr2:11343996:- chr2:11658722:- FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 ARPC1A-TRRAP 6 12 chr7:99333417:+ chr7:98981769:+ FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 NEDD4L-SPINT2 1 23 chr18:58165861:+ chr19:38283627:+ FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 TTC6-FAM177A1 3 14 chr14:37606742:+ chr14:35053278:+ . NA TCGA-EJ-A46G-01A-31R-A26U-07 TTC6-KIAA0391 2 15 chr14:37606742:+ chr14:35266727:+ . NA TCGA-EJ-A46G-01A-31R-A26U-07 ATP5H-GRB2 4 6 chr17:75042181:- chr17:75332797:- INFRAME NA TCGA-EJ-A46G-01A-31R-A26U-07 TRAPPC10-UBASH3A 4 3 chr21:44084263:+ chr21:42413024:+ FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 CHST8-PDCD5 1 10 chr19:33622296:+ chr19:32582195:+ . NA TCGA-EJ-A46G-01A-31R-A26U-07 LIMCH1-UCHL1 2 3 chr4:41524478:+ chr4:41256593:+ . NA TCGA-EJ-A46G-01A-31R-A26U-07 PRKAG2-KMT2C 1 4 chr7:151675420:- chr7:152163826:- INFRAME Likely Oncogenic NA TCGA-EJ-A46G-01A-31R-A26U-07 CBLB-KIAA1524 1 2 chr3:105853414:- chr3:108585212:- FRAMESHIFT NA TCGA-EJ-A46G-01A-31R-A26U-07 RTN1-C14orf39 1 2 chr14:59745708:- chr14:60442131:- FRAMESHIFT NA TCGA-EJ-A46I-01A-12R-A26U-07 TMPRSS2-ERG 2 1 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-A65B-01A-12R-A30B-07 FIP1L1-SLC38A8 42 151 chr4:53440608:+ chr16:84013052:- INFRAME NA TCGA-EJ-A65B-01A-12R-A30B-07 ALG11-JPH3 1 7 chr13:52024937:+ chr16:87696580:+ FRAMESHIFT NA TCGA-EJ-A65B-01A-12R-A30B-07 KIAA1671-SNRPD3 2 2 chr22:25049364:+ chr22:24557657:+ . NA TCGA-EJ-A65D-01A-11R-A30B-07 TMPRSS2-ERG 25 16 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-A65D-01A-11R-A30B-07 ERG-TMPRSS2 5 7 chr21:38575662:- chr21:41480602:- FRAMESHIFT Oncogenic NA TCGA-EJ-A65D-01A-11R-A30B-07 MAP7-POLR2J 3 3 chr6:136365735:- chr7:102476270:- FRAMESHIFT NA TCGA-EJ-A65D-01A-11R-A30B-07 LRRC58-LSAMP 1 3 chr3:120348744:- chr3:116086556:- INFRAME NA TCGA-EJ-A65E-01A-11R-A29R-07 DUSP22-PTK7 4 16 chr6:348841:+ chr6:43138849:+ INFRAME NA TCGA-EJ-A65F-01A-21R-A311-07 TMPRSS2-ERG 34 30 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-A65F-01A-21R-A311-07 MAP7-CITED2 1 42 chr6:136550342:- chr6:139373952:- INFRAME NA TCGA-EJ-A65G-01A-21R-A29R-07 SLC38A10-CYB5D2 2 1 chr17:81289691:- chr17:4149891:+ INFRAME NA TCGA-EJ-A65G-01A-21R-A29R-07 COL12A1-TDRD3 1 1 chr6:75091490:- chr13:60567525:+ INFRAME NA TCGA-EJ-A65J-01A-11R-A311-07 CAMKK2-KDM2B 3 54 chr12:121270898:- chr12:121453344:- INFRAME NA TCGA-EJ-A65J-01A-11R-A311-07 ARHGAP18-THEMIS 5 20 chr6:129710024:- chr6:127901081:- . NA TCGA-EJ-A65J-01A-11R-A311-07 FRA10AC1-PDE6C 4 15 chr10:93670770:- chr10:93658901:+ INFRAME NA TCGA-EJ-A65M-01A-11R-A29R-07 PLPP5-SARAF 2 7 chr8:38267267:- chr8:30070059:- INFRAME NA TCGA-EJ-A65M-01A-11R-A29R-07 ORC5-FGGY 1 4 chr7:104183943:- chr1:59757931:+ FRAMESHIFT NA TCGA-EJ-A65M-01A-11R-A29R-07 BBS7-PLA1A 1 3 chr4:121867981:- chr3:119608770:+ FRAMESHIFT NA TCGA-EJ-A65M-01A-11R-A29R-07 FAM193A-PLPP5 1 3 chr4:2716104:+ chr8:38266311:- FRAMESHIFT NA TCGA-EJ-A6RA-01A-11R-A33R-07 GOLM1-ZCCHC6 3 5 chr9:86033282:- chr9:86288744:- INFRAME NA TCGA-EJ-A6RA-01A-11R-A33R-07 ABRACL-PERP 2 1 chr6:139034221:+ chr6:138096494:- INFRAME NA TCGA-EJ-A6RC-01A-11R-A32O-07 SLC26A4-NNMT 5 7 chr7:107702057:+ chr11:114262848:+ . NA TCGA-EJ-A6RC-01A-11R-A32O-07 MALT1-SLC26A4 2 2 chr18:58735329:+ chr7:107698042:+ FRAMESHIFT NA TCGA-EJ-A7NF-01A-11R-A33R-07 TMPRSS2-ERG 50 21 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-EJ-A7NF-01A-11R-A33R-07 AFDN-EXOC6B 2 8 chr6:167902386:+ chr2:72575668:- INFRAME NA TCGA-EJ-A7NF-01A-11R-A33R-07 ACER2-C8orf37 1 5 chr9:19435084:+ chr8:95263774:- INFRAME NA TCGA-EJ-A7NH-01A-12R-A33R-07 DIRC2-DDT 4 30 chr3:122806950:+ chr22:23971623:- INFRAME NA TCGA-EJ-A7NH-01A-12R-A33R-07 DDT-ACPP 1 8 chr22:23973768:- chr3:132356686:+ INFRAME NA TCGA-EJ-A7NH-01A-12R-A33R-07 CUL4A-DLEU7 1 3 chr13:113210088:+ chr13:50823520:- INFRAME NA TCGA-EJ-A7NK-01A-12R-A352-07 PATJ-SGIP1 5 2 chr1:61808530:+ chr1:66625847:+ FRAMESHIFT NA TCGA-EJ-A7NK-01A-12R-A352-07 AMD1-MBOAT2 2 8 chr6:110888983:+ chr2:8864234:- INFRAME NA TCGA-EJ-A7NK-01A-12R-A352-07 TMPRSS2-ERG 1 8 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-EJ-A7NM-01A-21R-A33R-07 TMEFF2-SRPK2 2 4 chr2:191998262:- chr7:105268869:- . NA TCGA-EJ-A7NM-01A-21R-A33R-07 MBOAT2-BRAT1 2 3 chr2:9003540:- chr7:2547478:- FRAMESHIFT NA TCGA-EJ-A8FN-01A-11R-A352-07 SSBP1-PON1 8 3 chr7:141738410:+ chr7:95318393:- . NA TCGA-EJ-A8FN-01A-11R-A352-07 SRPK2-INTS4P1 3 11 chr7:105388648:- chr7:65200618:+ . NA TCGA-EJ-A8FN-01A-11R-A352-07 AP3S1-C1orf100 1 2 chr5:115842106:+ chr1:244375372:+ FRAMESHIFT NA TCGA-EJ-A8FS-01A-11R-A352-07 CLPX-IGDCC4 9 29 chr15:65185075:- chr15:65394548:- INFRAME NA TCGA-EJ-A8FS-01A-11R-A352-07 NEK7-CD1C 4 24 chr1:198157276:+ chr1:158291134:+ . NA TCGA-EJ-A8FU-01A-11R-A36G-07 NRF1-PDIA4 1 2 chr7:129727365:+ chr7:149021147:- INFRAME NA TCGA-EJ-AB27-01A-11R-A41O-07 PTAR1-ABHD17B 9 27 chr9:69741792:- chr9:71862607:- FRAMESHIFT NA TCGA-EJ-AB27-01A-11R-A41O-07 ETV3-C1orf61 1 7 chr1:157134112:- chr1:156430119:- . NA TCGA-FC-7708-01A-11R-2118-07 TMPRSS2-ERG 17 94 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-FC-7708-01A-11R-2118-07 PMPCB-PRKAR2B 7 26 chr7:103312131:+ chr7:107121952:+ INFRAME NA TCGA-FC-7708-01A-11R-2118-07 LRP1-OS9 2 7 chr12:57129031:+ chr12:57694750:+ FRAMESHIFT NA TCGA-FC-7708-01A-11R-2118-07 MPDU1-GLP2R 2 7 chr17:7583965:+ chr17:9833807:+ INFRAME NA TCGA-FC-7708-01A-11R-2118-07 PPP3CC-GPR141 3 3 chr8:22441458:+ chr7:37740380:+ . NA TCGA-FC-7708-01A-11R-2118-07 GSK3B-COX17 1 6 chr3:119863419:- chr3:119675233:- FRAMESHIFT NA TCGA-FC-7961-01A-11R-A29R-07 RPS6KC1-VASH2 2 26 chr1:213176492:+ chr1:212988512:+ FRAMESHIFT NA TCGA-FC-7961-01A-11R-A29R-07 PDS5B-PSPC1 1 1 chr13:32586593:+ chr13:19677823:- . NA TCGA-FC-A4JI-01A-11R-A250-07 TMEM68-DPYS 82 288 chr8:55743481:- chr8:104424389:- INFRAME NA TCGA-FC-A4JI-01A-11R-A250-07 NRG1-STMN2 17 71 chr8:32605683:+ chr8:79636802:+ INFRAME NA TCGA-FC-A4JI-01A-11R-A250-07 NAP1L4-ATP11B 8 101 chr11:2964680:- chr3:182913861:+ INFRAME NA TCGA-FC-A4JI-01A-11R-A250-07 NCOA2-EIF4EBP1 11 84 chr8:70403700:- chr8:38057081:+ . NA TCGA-FC-A4JI-01A-11R-A250-07 SPIDR-SLA 13 53 chr8:47407961:+ chr8:133075130:- . NA TCGA-FC-A4JI-01A-11R-A250-07 TTC21B-COBLL1 6 34 chr2:165858215:- chr2:164743875:- . NA TCGA-FC-A4JI-01A-11R-A250-07 CADM2-UBE2E2 6 16 chr3:84959668:+ chr3:23532554:+ FRAMESHIFT NA TCGA-FC-A4JI-01A-11R-A250-07 TP53TG1-SLC4A4 4 8 chr7:87341523:- chr4:71339370:+ . NA TCGA-FC-A4JI-01A-11R-A250-07 COBLL1-FIGN 1 17 chr2:164779655:- chr2:163593796:- FRAMESHIFT NA TCGA-FC-A4JI-01A-11R-A250-07 CAPZA2-CMSS1 2 9 chr7:116888190:+ chr3:100146973:+ INFRAME NA TCGA-FC-A4JI-01A-11R-A250-07 PCGEM1-KBTBD12 2 8 chr2:192750872:+ chr3:127927764:+ . NA TCGA-FC-A4JI-01A-11R-A250-07 CUL5-OPCML 2 7 chr11:108009372:+ chr11:132437359:- FRAMESHIFT NA TCGA-FC-A4JI-01A-11R-A250-07 SENP7-ABI3BP 1 9 chr3:101493873:- chr3:100834773:- FRAMESHIFT NA TCGA-FC-A4JI-01A-11R-A250-07 GSK3B-TSC22D2 1 8 chr3:119905755:- chr3:150457076:+ FRAMESHIFT NA TCGA-FC-A4JI-01A-11R-A250-07 RB1CC1-MMP16 2 3 chr8:52683549:- chr8:88074743:- INFRAME NA TCGA-FC-A4JI-01A-11R-A250-07 MMP16-ZFHX4 1 5 chr8:88074605:- chr8:76833338:+ INFRAME NA TCGA-FC-A5OB-01A-11R-A29R-07 SLC45A3-ZBTB7B 50 254 chr1:205680394:- chr1:155014655:+ . NA TCGA-FC-A5OB-01A-11R-A29R-07 ZBTB7B-NUCKS1 4 71 chr1:155002943:+ chr1:205729621:- . NA TCGA-FC-A5OB-01A-11R-A29R-07 MAST2-COQ6 5 7 chr1:46008371:+ chr14:73958971:+ INFRAME NA TCGA-FC-A66V-01A-21R-A30B-07 B4GALNT3-CCDC77 1 1 chr12:460545:+ chr12:438335:+ FRAMESHIFT NA TCGA-FC-A6HD-01A-11R-A31N-07 LETM1-FMC1 4 69 chr4:1832744:- chr7:139345501:+ INFRAME NA TCGA-FC-A6HD-01A-11R-A31N-07 DNAAF5-PLCXD2 8 47 chr7:729847:+ chr3:111778268:+ . NA TCGA-G9-6329-01A-13R-1965-07 TMPRSS2-ERG 141 955 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-G9-6329-01A-13R-1965-07 TP53-CD68 22 297 chr17:7687377:- chr17:7580711:+ . Likely Oncogenic NA TCGA-G9-6329-01A-13R-1965-07 LAMA3-COX8C 2 17 chr18:23847668:+ chr14:93348028:+ FRAMESHIFT NA TCGA-G9-6332-01A-11R-1789-07 TMPRSS2-ERG 62 294 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-G9-6332-01A-11R-1789-07 TMEFF2-CHMP1A 1 3 chr2:192179668:- chr16:89647331:- FRAMESHIFT NA TCGA-G9-6333-01A-12R-1965-07 LRRC1-MLIP 2 62 chr6:53913969:+ chr6:54257308:+ FRAMESHIFT NA TCGA-G9-6333-01A-12R-1965-07 GSK3B-ATP11B 3 13 chr3:120002046:- chr3:182913861:+ INFRAME NA TCGA-G9-6333-01A-12R-1965-07 CAMKK2-KDM2B 2 12 chr12:121270898:- chr12:121453344:- INFRAME NA TCGA-G9-6333-01A-12R-1965-07 TNS3-NUDCD3 1 12 chr7:47396800:- chr7:44383756:- . NA TCGA-G9-6333-01A-12R-1965-07 PIK3R3-TRPM8 1000 1000 chr1:46043654:- chr2:234017299:+ . Likely Oncogenic NA TCGA-G9-6336-01A-11R-1789-07 TMPRSS2-ERG 5 3 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6336-01A-11R-1789-07 SLC45A3-ETV1 2 3 chr1:205680394:- chr7:13935896:- . Likely Oncogenic NA TCGA-G9-6338-01A-12R-1965-07 NRAP-SLC35A4 8 1 chr10:113588969:- chr5:140568158:+ . NA TCGA-G9-6338-01A-12R-1965-07 NUDT3-MAPK8 1 1 chr6:34392264:- chr10:48431193:+ FRAMESHIFT NA TCGA-G9-6339-01A-12R-A311-07 MAP4-CCDC12 4 76 chr3:47870813:- chr3:46941065:- INFRAME NA TCGA-G9-6339-01A-12R-A311-07 DHX15-ETV1 9 35 chr4:24584323:- chr7:13935896:- INFRAME Likely Oncogenic NA TCGA-G9-6339-01A-12R-A311-07 RYBP-CNTN4 2 11 chr3:72446496:- chr3:2736215:+ INFRAME Likely Oncogenic NA TCGA-G9-6339-01A-12R-A311-07 ALCAM-NRROS 1 8 chr3:105524508:+ chr3:196654527:+ . NA TCGA-G9-6342-01A-11R-1965-07 TMPRSS2-ERG 105 93 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-G9-6342-01A-11R-1965-07 ATG4C-LEPR 5 7 chr1:62841547:+ chr1:65633152:+ INFRAME NA TCGA-G9-6342-01A-11R-1965-07 SLC30A4-CLRN2 1 11 chr15:45521964:- chr4:17526817:+ INFRAME NA TCGA-G9-6348-01A-11R-1789-07 PRR15L-KCNH4 30 205 chr17:47957657:- chr17:42157118:- . NA TCGA-G9-6348-01A-11R-1789-07 PRR15L-RAB5C 17 149 chr17:47957657:- chr17:42130590:- . NA TCGA-G9-6348-01A-11R-1789-07 ACVR2A-AKT3 5 9 chr2:147845207:+ chr1:243664883:- INFRAME Likely Oncogenic NA TCGA-G9-6348-01A-11R-1789-07 FAM217B-CDH12 5 9 chr20:59942512:+ chr5:21975385:- . NA TCGA-G9-6348-01A-11R-1789-07 MAP1B-SLC27A2 2 8 chr5:72115799:+ chr15:50197500:+ INFRAME NA TCGA-G9-6348-01A-11R-1789-07 ZC3H15-SERINC1 2 3 chr2:186486457:+ chr6:122458681:- INFRAME NA TCGA-G9-6348-01A-11R-1789-07 KIAA0141-NMI 2 1 chr5:141934586:+ chr2:151282954:- . NA TCGA-G9-6351-01A-21R-1965-07 TMPRSS2-HDLBP 338 2627 chr21:41476577:- chr2:241228410:- . Likely Oncogenic NA TCGA-G9-6351-01A-21R-1965-07 SLC45A3-ERG 36 193 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-G9-6351-01A-21R-1965-07 USP45-RIOK1 7 46 chr6:99508610:- chr6:7417331:+ INFRAME NA TCGA-G9-6351-01A-21R-1965-07 NINL-NAA20 8 22 chr20:25526408:- chr20:20026784:+ FRAMESHIFT NA TCGA-G9-6351-01A-21R-1965-07 TMPRSS2-ERG 4 21 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6351-01A-21R-1965-07 HDLBP-TMPRSS2 2 15 chr2:241233820:- chr21:41473496:- FRAMESHIFT Likely Oncogenic NA TCGA-G9-6351-01A-21R-1965-07 TMPRSS2-ETV4 1 5 chr21:41494356:- chr17:43530181:- INFRAME Likely Oncogenic NA TCGA-G9-6353-01A-11R-1965-07 TMPRSS2-ERG 4 21 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6353-01A-11R-1965-07 GMDS-CCND3 1 11 chr6:2245321:- chr6:41937394:- INFRAME NA TCGA-G9-6353-01A-11R-1965-07 WRB-BACE2 1 5 chr21:39391836:+ chr21:41275371:+ INFRAME NA TCGA-G9-6353-01A-11R-1965-07 RREB1-GABARAPL1 1 3 chr6:7231907:+ chr12:10218063:+ FRAMESHIFT NA TCGA-G9-6354-01A-11R-A311-07 TMPRSS2-ERG 12 55 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-G9-6354-01A-11R-A311-07 DYNC1LI1-MRPS11 6 50 chr3:32541037:- chr15:88476989:+ INFRAME NA TCGA-G9-6354-01A-11R-A311-07 ATXN2-TRIM37 4 31 chr12:111485271:- chr17:59001714:- INFRAME NA TCGA-G9-6356-01A-11R-1789-07 PCAT14-TRIOBP 221 822 chr22:23538838:+ chr22:37765670:+ . NA TCGA-G9-6356-01A-11R-1789-07 ZNF207-ETV4 25 73 chr17:32365398:+ chr17:43536479:- INFRAME NA TCGA-G9-6356-01A-11R-1789-07 TMPRSS2-ERG 9 7 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6356-01A-11R-1789-07 GAREM1-NEDD4L 1 4 chr18:32470308:- chr18:58165788:+ FRAMESHIFT NA TCGA-G9-6361-01A-21R-1965-07 TMPRSS2-ERG 34 18 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6361-01A-21R-1965-07 UVRAG-PCBD1 9 87 chr11:75912039:+ chr10:70884048:- FRAMESHIFT NA TCGA-G9-6361-01A-21R-1965-07 SIK2-PIR 9 86 chr11:111712375:+ chrX:15459740:- INFRAME NA TCGA-G9-6361-01A-21R-1965-07 EMSY-CDH23 4 14 chr11:76447008:+ chr10:71730469:+ FRAMESHIFT NA TCGA-G9-6361-01A-21R-1965-07 ACTR1A-ARMC4 3 13 chr10:102502600:- chr10:27812625:- INFRAME NA TCGA-G9-6361-01A-21R-1965-07 USP48-PSMA8 2 15 chr1:21751507:- chr18:26144559:+ INFRAME NA TCGA-G9-6361-01A-21R-1965-07 SLC10A7-FKBP15 3 6 chr4:146442783:- chr9:113170629:- INFRAME NA TCGA-G9-6361-01A-21R-1965-07 RAP1GDS1-ASTN2 3 5 chr4:98421394:+ chr9:116651793:- FRAMESHIFT NA TCGA-G9-6361-01A-21R-1965-07 RAI2-PPP2R1B 2 7 chrX:17860509:- chr11:111755450:- . NA TCGA-G9-6361-01A-21R-1965-07 GPALPP1-MEF2A 2 5 chr13:44989742:+ chr15:99671323:+ FRAMESHIFT NA TCGA-G9-6361-01A-21R-1965-07 MAML3-LSG1 1 2 chr4:140152860:- chr3:194666572:- INFRAME NA TCGA-G9-6362-01A-11R-1789-07 TMPRSS2-ERG 8 6 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6363-01A-21R-1789-07 TMPRSS2-ERG 7 5 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6363-01A-21R-1789-07 TAOK1-ABHD15 4 13 chr17:29502723:+ chr17:29563086:- FRAMESHIFT NA TCGA-G9-6363-01A-21R-1789-07 DAP3-ATP8B2 1 5 chr1:155689174:+ chr1:154344971:+ . NA TCGA-G9-6364-01A-21R-1789-07 SLC35F5-WIPF1 13 121 chr2:113750425:- chr2:174677124:- . NA TCGA-G9-6364-01A-21R-1789-07 FYTTD1-IFIT1 4 18 chr3:197750074:+ chr10:89402281:+ FRAMESHIFT NA TCGA-G9-6364-01A-21R-1789-07 TMPRSS2-ERG 6 8 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6364-01A-21R-1789-07 GBF1-WBP1L 3 9 chr10:102344182:+ chr10:102809893:+ INFRAME NA TCGA-G9-6364-01A-21R-1789-07 CPNE4-MRPL3 1 4 chr3:132034567:- chr3:131500521:- . NA TCGA-G9-6364-01A-21R-1789-07 ARHGEF3-FAM208A 1 3 chr3:57035088:- chr3:56663572:- INFRAME NA TCGA-G9-6365-01A-11R-1789-07 TMPRSS2-ERG 9 32 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6366-01A-11R-2118-07 ACPP-MYC 35 148 chr3:132332344:+ chr8:127738248:+ INFRAME Likely Oncogenic NA TCGA-G9-6366-01A-11R-2118-07 SLC25A21-FOXA1 1000 1000 chr14:36874955:- chr14:37592710:- . NA TCGA-G9-6371-01A-11R-1789-07 TMPRSS2-ETV4 567 359 chr21:41508081:- chr17:43545367:- . Likely Oncogenic NA TCGA-G9-6371-01A-11R-1789-07 REXO2-NXPE1 3 7 chr11:114439675:+ chr11:114552880:- . NA TCGA-G9-6373-01A-11R-1789-07 TMPRSS2-ERG 18 6 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6373-01A-11R-1789-07 CYB561D1-CYMP 2 10 chr1:109494287:+ chr1:110482775:+ . NA TCGA-G9-6373-01A-11R-1789-07 RAPGEF2-C4orf45 2 6 chr4:159346998:+ chr4:158893717:- FRAMESHIFT NA TCGA-G9-6377-01A-11R-1965-07 TMPRSS2-ERG 16 19 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6377-01A-11R-1965-07 UQCC1-MRPS35 5 14 chr20:35314688:- chr12:27735447:+ INFRAME NA TCGA-G9-6377-01A-11R-1965-07 NFKB1-LHFPL3 3 5 chr4:102525557:+ chr7:104906187:+ FRAMESHIFT NA TCGA-G9-6377-01A-11R-1965-07 KLF15-SLC41A3 2 2 chr3:126351841:- chr3:126033678:- FRAMESHIFT NA TCGA-G9-6377-01A-11R-1965-07 PIEZO1-TMEM219 1 5 chr16:88719574:- chr16:29963110:+ . NA TCGA-G9-6379-01A-11R-A31N-07 HMGN2P46-AGAP1 2 4 chr15:45515892:+ chr2:235750354:+ . NA TCGA-G9-6384-01A-11R-1789-07 TMPRSS2-ERG 79 63 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6384-01A-11R-1789-07 AFF3-TMPRSS2 2 15 chr2:100006632:- chr21:41498189:- FRAMESHIFT Likely Oncogenic NA TCGA-G9-6384-01A-11R-1789-07 HAUS6-MORC1 1 2 chr9:19102524:- chr3:109007091:- FRAMESHIFT NA TCGA-G9-6385-01A-11R-1789-07 TMPRSS2-ERG 13 8 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-6494-01A-11R-1789-07 SLC25A39-EFCAB13 7 53 chr17:44321058:- chr17:47361378:+ INFRAME NA TCGA-G9-6494-01A-11R-1789-07 ALDH3A2-PITPNM2 4 18 chr17:19665047:+ chr12:122992669:- INFRAME NA TCGA-G9-6494-01A-11R-1789-07 DCAF5-MYO1D 1 11 chr14:69091674:- chr17:32780784:- FRAMESHIFT NA TCGA-G9-6494-01A-11R-1789-07 TMEM120B-UBTF 2 2 chr12:121712964:+ chr17:44218296:- . NA TCGA-G9-6496-01A-11R-1789-07 HIPK2-ARHGEF5 1 8 chr7:139626601:- chr7:144362658:+ . NA TCGA-G9-6496-01A-11R-1789-07 EXOC1-ARL9 1 6 chr4:55860541:+ chr4:56523697:+ INFRAME NA TCGA-G9-6498-01A-12R-A311-07 ACPP-ZNF462 3 5 chr3:132317576:+ chr9:106923354:+ . NA TCGA-G9-6499-01A-12R-1965-07 MPZL1-ILDR2 1 18 chr1:167776166:+ chr1:166908104:- . NA TCGA-G9-6499-01A-12R-1965-07 MYO1B-SPAG16 2 11 chr2:191277030:+ chr2:214410140:+ FRAMESHIFT NA TCGA-G9-7509-01A-11R-A41O-07 TMPRSS2-ERG 21 30 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-G9-7509-01A-11R-A41O-07 PHF12-LIG3 1 11 chr17:28950065:- chr17:34997738:+ INFRAME NA TCGA-G9-7509-01A-11R-A41O-07 PDZRN3-FOXP1 1 4 chr3:73602354:- chr3:71053773:- INFRAME Likely Oncogenic NA TCGA-G9-7510-01A-11R-2263-07 RTEL1-STMN3 26 49 chr20:63674093:+ chr20:63644309:- INFRAME NA TCGA-G9-7510-01A-11R-2263-07 VGLL3-RBMS3 8 30 chr3:86968590:- chr3:29587114:+ INFRAME NA TCGA-G9-7510-01A-11R-2263-07 EIF2AK3-IGKV1-32 6 4 chr2:88570874:- chr2:89253842:- . NA TCGA-G9-7510-01A-11R-2263-07 ETV3-MNDA 4 4 chr1:157134112:- chr1:158842134:+ . NA TCGA-G9-7510-01A-11R-2263-07 KLHL2-CPE 1 11 chr4:165220059:+ chr4:165464390:+ FRAMESHIFT NA TCGA-G9-7521-01A-11R-2263-07 KIAA0825-MCTP1 3 10 chr5:94618500:- chr5:94714886:- . NA TCGA-G9-7521-01A-11R-2263-07 SLC41A2-ANAPC7 2 4 chr12:104886293:- chr12:110387892:- INFRAME NA TCGA-G9-7522-01A-11R-2263-07 SLC45A3-ERG 53 253 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-G9-7522-01A-11R-2263-07 RERE-OOEP 5 95 chr1:8422727:- chr6:73369385:- FRAMESHIFT NA TCGA-G9-7522-01A-11R-2263-07 ZFHX3-ZMAT4 3 13 chr16:72811577:- chr8:40581261:- FRAMESHIFT NA TCGA-G9-7522-01A-11R-2263-07 DHX9-RASAL2 1 7 chr1:182839456:+ chr1:178390100:+ . NA TCGA-G9-7523-01A-11R-2263-07 HDAC8-PHKA1 3 11 chrX:72567889:- chrX:72584302:- FRAMESHIFT NA TCGA-G9-7525-01A-31R-2263-07 TMPRSS2-ERG 19 12 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-7525-01A-31R-2263-07 YBX3-BORCS5 1 12 chr12:10722850:- chr12:12435628:+ INFRAME NA TCGA-G9-7525-01A-31R-2263-07 NCK2-KDM4C 2 6 chr2:105745138:+ chr9:7165238:+ . NA TCGA-G9-7525-01A-31R-2263-07 RORA-STARD9 1 3 chr15:60592387:- chr15:42716677:+ FRAMESHIFT NA TCGA-G9-7525-01A-31R-2263-07 RSU1-ZMYND11 1 3 chr10:16782034:- chr10:248336:+ FRAMESHIFT NA TCGA-G9-A9S0-01A-11R-A41O-07 DCAF6-MPZL1 3 16 chr1:168004793:+ chr1:167765583:+ INFRAME NA TCGA-G9-A9S0-01A-11R-A41O-07 RAB11FIP4-ARHGAP23 3 3 chr17:31525230:+ chr17:38458102:+ FRAMESHIFT NA TCGA-G9-A9S0-01A-11R-A41O-07 ARHGAP23-ZSCAN2 2 6 chr17:38460932:+ chr15:84616309:+ INFRAME NA TCGA-G9-A9S0-01A-11R-A41O-07 ZCCHC8-DIABLO 1 5 chr12:122498827:- chr12:122218397:- FRAMESHIFT NA TCGA-G9-A9S7-01A-11R-A41O-07 TMPRSS2-ERG 79 144 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-G9-A9S7-01A-11R-A41O-07 DIS3L2-DNM1 11 24 chr2:232263440:+ chr9:128234021:+ INFRAME NA TCGA-G9-A9S7-01A-11R-A41O-07 CDH1-CA1 6 30 chr16:68738411:+ chr8:85333620:- FRAMESHIFT Likely Oncogenic NA TCGA-G9-A9S7-01A-11R-A41O-07 TMPRSS2-KLF4 5 34 chr21:41488394:- chr9:107489338:- . Likely Oncogenic NA TCGA-G9-A9S7-01A-11R-A41O-07 KDM4B-ASTN2 9 11 chr19:4969230:+ chr9:116620443:- . NA TCGA-G9-A9S7-01A-11R-A41O-07 KLHDC4-MAF 6 14 chr16:87765792:- chr16:79594553:- FRAMESHIFT NA TCGA-G9-A9S7-01A-11R-A41O-07 TFRC-BLOC1S5 2 12 chr3:196077064:- chr6:8041268:- INFRAME NA TCGA-G9-A9S7-01A-11R-A41O-07 NDUFS4-BASP1 1 3 chr5:53560760:+ chr5:17275208:+ . NA TCGA-H9-7775-01A-11R-2118-07 HBP1-ATXN7L1 2 9 chr7:107169027:+ chr7:105761463:- . NA TCGA-H9-7775-01A-11R-2118-07 HMGN2P46-ST14 1 13 chr15:45513963:+ chr11:130188114:+ . NA TCGA-H9-A6BX-01A-31R-A311-07 FLNA-ACTG2 1 5 chrX:154367397:- chr2:73913485:+ INFRAME NA TCGA-H9-A6BY-01A-11R-A30B-07 LRP1-OS9 72 383 chr12:57158638:+ chr12:57720406:+ INFRAME NA TCGA-H9-A6BY-01A-11R-A30B-07 TMPRSS2-ERG 23 50 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-HC-7077-01A-11R-1965-07 TMPRSS2-ETV4 419 1317 chr21:41508081:- chr17:43545367:- . Likely Oncogenic NA TCGA-HC-7077-01A-11R-1965-07 ZNF10-SPATA17 11 139 chr12:133131014:+ chr1:217862774:+ . NA TCGA-HC-7077-01A-11R-1965-07 TMPRSS2-ERG 31 22 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7077-01A-11R-1965-07 CHD8-AP1S1 13 78 chr14:21409851:- chr7:101160519:+ INFRAME NA TCGA-HC-7077-01A-11R-1965-07 EP300-NXPE2 9 28 chr22:41150198:+ chr11:114698045:+ INFRAME Likely Oncogenic NA TCGA-HC-7077-01A-11R-1965-07 POLR2J2-DAD1 1 19 chr7:102671552:- chr14:22575233:- INFRAME NA TCGA-HC-7077-01A-11R-1965-07 DLG5-TMPRSS2 1 15 chr10:77833914:- chr21:41470743:- FRAMESHIFT Likely Oncogenic NA TCGA-HC-7077-01A-11R-1965-07 RRBP1-VDAC3 2 9 chr20:17629823:- chr8:42399651:+ INFRAME NA TCGA-HC-7077-01A-11R-1965-07 ZMIZ1-ZCCHC24 1 9 chr10:79216274:+ chr10:79432758:- INFRAME NA TCGA-HC-7078-01A-11R-2118-07 PTPN23-ICA1L 8 21 chr3:47381180:+ chr2:202796964:- FRAMESHIFT NA TCGA-HC-7078-01A-11R-2118-07 CTPS1-HIVEP3 2 3 chr1:40979829:+ chr1:41918524:- . NA TCGA-HC-7079-01A-11R-1965-07 TMPRSS2-ETV4 1 8 chr21:41498119:- chr17:43545668:- . Likely Oncogenic NA TCGA-HC-7080-01A-11R-1965-07 PCMTD2-MACROD2 5 15 chr20:64260272:+ chr20:15229940:+ INFRAME NA TCGA-HC-7080-01A-11R-1965-07 AGPAT5-PRSS55 3 15 chr8:6708887:+ chr8:10529507:+ INFRAME NA TCGA-HC-7080-01A-11R-1965-07 CLSTN1-IFFO2 2 4 chr1:9823643:- chr1:18921121:- FRAMESHIFT NA TCGA-HC-7080-01A-11R-1965-07 ZNF827-ABCE1 2 3 chr4:145938365:- chr4:145104386:+ . NA TCGA-HC-7080-01A-11R-1965-07 MSRA-AGPAT5 1 3 chr8:10319989:+ chr8:6755051:+ FRAMESHIFT NA TCGA-HC-7080-01A-11R-1965-07 LRRIQ1-UHRF1BP1L 1 1 chr12:85047470:+ chr12:100072813:- INFRAME NA TCGA-HC-7081-01A-11R-1965-07 TMPRSS2-ERG 42 34 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7081-01A-11R-1965-07 BRWD1-RAPGEF4 31 60 chr21:39298432:- chr2:173048600:+ FRAMESHIFT NA TCGA-HC-7081-01A-11R-1965-07 PRKRA-SEC31A 4 22 chr2:178450966:- chr4:82881940:- FRAMESHIFT NA TCGA-HC-7081-01A-11R-1965-07 ZNF292-PTPRO 2 9 chr6:87155759:+ chr12:15499442:+ INFRAME NA TCGA-HC-7209-01A-11R-2118-07 RNF144B-PPP3CA 222 751 chr6:18399699:+ chr4:101196116:- FRAMESHIFT NA TCGA-HC-7209-01A-11R-2118-07 TMPRSS2-ERG 52 54 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7209-01A-11R-2118-07 STX3-MS4A15 20 136 chr11:59755635:+ chr11:60767567:+ INFRAME NA TCGA-HC-7209-01A-11R-2118-07 KCNMA1-FARP1 15 61 chr10:77637265:- chr13:98213220:+ . NA TCGA-HC-7209-01A-11R-2118-07 GPLD1-BANK1 6 53 chr6:24486075:- chr4:101855035:+ FRAMESHIFT NA TCGA-HC-7209-01A-11R-2118-07 NFAT5-TCF7L2 12 19 chr16:69566374:+ chr10:113141184:+ FRAMESHIFT Likely Oncogenic NA TCGA-HC-7209-01A-11R-2118-07 EFTUD2-DUSP3 5 15 chr17:44883649:- chr17:43769814:- FRAMESHIFT NA TCGA-HC-7209-01A-11R-2118-07 AARSD1-CCR7 2 26 chr17:42961192:- chr17:40558942:- INFRAME NA TCGA-HC-7209-01A-11R-2118-07 CECR2-C22orf31 1 4 chr22:17369909:+ chr22:29060843:- INFRAME NA TCGA-HC-7209-01A-11R-2118-07 BMPR1A-FGFBP3 1000 1000 chr10:86756919:+ chr10:91909478:- . NA TCGA-HC-7210-01A-11R-2118-07 SENP6-OOEP 12 137 chr6:75634811:+ chr6:73369385:- FRAMESHIFT NA TCGA-HC-7210-01A-11R-2118-07 TUSC3-LOXL2 8 25 chr8:15743612:+ chr8:23368434:- INFRAME NA TCGA-HC-7210-01A-11R-2118-07 ACPP-NEDD4L 1 8 chr3:132337554:+ chr18:58165788:+ INFRAME NA TCGA-HC-7210-01A-11R-2118-07 DARS-THSD7B 1 4 chr2:135932783:- chr2:137405613:+ FRAMESHIFT NA TCGA-HC-7211-01A-11R-2118-07 SLC45A3-EPB41L4B 27 188 chr1:205659489:- chr9:109279921:- INFRAME NA TCGA-HC-7211-01A-11R-2118-07 C19orf48-ZBTB25 36 82 chr19:50803629:- chr14:64504946:- . NA TCGA-HC-7211-01A-11R-2118-07 ZBTB20-CLDN11 2 8 chr3:114350274:- chr3:170423163:+ INFRAME NA TCGA-HC-7211-01A-11R-2118-07 TMPRSS2-ERG 2 5 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7211-01A-11R-2118-07 TPCN2-ZBTB1 2 4 chr11:69087206:+ chr14:64521487:+ . NA TCGA-HC-7211-01A-11R-2118-07 RASA2-ACPP 1 7 chr3:141610066:+ chr3:132344927:+ FRAMESHIFT NA TCGA-HC-7212-01A-11R-2118-07 TMPRSS2-ERG 38 204 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7212-01A-11R-2118-07 RAP1GDS1-SCD5 5 7 chr4:98404602:+ chr4:82636823:- FRAMESHIFT NA TCGA-HC-7212-01A-11R-2118-07 SCD5-STAP1 2 10 chr4:82636591:- chr4:67606296:+ INFRAME NA TCGA-HC-7212-01A-11R-2118-07 AHSA1-TMEM67 1 4 chr14:77464686:+ chr8:93758483:+ INFRAME NA TCGA-HC-7213-01A-11R-2118-07 TMPRSS2-ERG 66 66 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7213-01A-11R-2118-07 CDC27-MYL4 10 220 chr17:47189146:- chr17:47209389:+ . NA TCGA-HC-7213-01A-11R-2118-07 JMJD1C-LIPF 13 95 chr10:63521738:- chr10:88667287:+ . NA TCGA-HC-7213-01A-11R-2118-07 ELAC2-COX10 19 63 chr17:13015768:- chr17:14159877:+ INFRAME NA TCGA-HC-7213-01A-11R-2118-07 SLC45A3-PHYKPL 3 73 chr1:205659489:- chr5:178211970:- FRAMESHIFT NA TCGA-HC-7213-01A-11R-2118-07 TMCO4-ERRFI1 1 2 chr1:19755634:- chr1:8015692:- . Likely Oncogenic NA TCGA-HC-7230-01A-11R-2118-07 TMPRSS2-ERG 24 148 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7230-01A-11R-2118-07 NAA25-WSCD2 9 18 chr12:112108716:- chr12:108226990:+ FRAMESHIFT NA TCGA-HC-7230-01A-11R-2118-07 CAB39L-USP12 5 4 chr13:49331947:- chr13:27075388:- FRAMESHIFT NA TCGA-HC-7230-01A-11R-2118-07 ERG-SON 3 11 chr21:38575662:- chr21:33546213:+ FRAMESHIFT Likely Oncogenic NA TCGA-HC-7231-01A-11R-2118-07 TMPRSS2-ERG 67 45 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7231-01A-11R-2118-07 BMPR1A-ENTPD1 2 49 chr10:86900126:+ chr10:95844476:+ INFRAME NA TCGA-HC-7231-01A-11R-2118-07 TET3-MNS1 2 2 chr2:74003166:+ chr15:56464247:- INFRAME NA TCGA-HC-7232-01A-11R-2118-07 SNX19-USP28 24 131 chr11:130914266:- chr11:113805046:- INFRAME NA TCGA-HC-7232-01A-11R-2118-07 TMPRSS2-ERG 28 100 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7232-01A-11R-2118-07 UTRN-MMADHC 5 41 chr6:144523188:+ chr2:149587149:- . NA TCGA-HC-7232-01A-11R-2118-07 GPHN-SLC8A3 9 21 chr14:67122377:+ chr14:70060939:- INFRAME NA TCGA-HC-7232-01A-11R-2118-07 REPS2-SMARCA1 4 7 chrX:17029623:+ chrX:129481185:- INFRAME NA TCGA-HC-7232-01A-11R-2118-07 NFE2L1-CARM1 3 10 chr17:48057502:+ chr19:10912184:+ INFRAME NA TCGA-HC-7232-01A-11R-2118-07 TMEFF2-UBE2E3 2 14 chr2:192179668:- chr2:181057693:+ FRAMESHIFT NA TCGA-HC-7232-01A-11R-2118-07 ZFHX3-ALS2CR11 2 14 chr16:72950469:- chr2:201575326:- INFRAME NA TCGA-HC-7232-01A-11R-2118-07 TCHP-IFT81 2 13 chr12:109908937:+ chr12:110203864:+ INFRAME NA TCGA-HC-7233-01A-11R-2118-07 ACPP-SAFB2 151 508 chr3:132317576:+ chr19:5616335:- INFRAME NA TCGA-HC-7233-01A-11R-2118-07 TXNDC16-ARG2 8 32 chr14:52542371:- chr14:67642186:+ FRAMESHIFT NA TCGA-HC-7233-01A-11R-2118-07 SETD5-MCM7 2 12 chr3:9397977:+ chr7:100098715:- . NA TCGA-HC-7233-01A-11R-2118-07 MIPOL1-SKIL 1 12 chr14:37422949:+ chr3:170359699:+ . NA TCGA-HC-7233-01A-11R-2118-07 TMEM216-PGM3 1 9 chr11:61393976:+ chr6:83188798:- FRAMESHIFT NA TCGA-HC-7233-01A-11R-2118-07 EBPL-MIPEP 1 8 chr13:49691254:- chr13:23760217:- INFRAME NA TCGA-HC-7233-01A-11R-2118-07 TSC22D2-SDCCAG8 1 8 chr3:150411308:+ chr1:243330540:+ INFRAME NA TCGA-HC-7233-01A-11R-2118-07 RERE-USP5 2 3 chr1:8703055:- chr12:6863186:+ . NA TCGA-HC-7736-01A-11R-2118-07 RRBP1-MACROD2 12 247 chr20:17682028:- chr20:15862745:+ . NA TCGA-HC-7736-01A-11R-2118-07 LINC-PINT-FGF14 10 32 chr7:130945720:- chr13:101875296:- . NA TCGA-HC-7736-01A-11R-2118-07 PCCA-COPG2 3 11 chr13:100368574:+ chr7:130564393:- INFRAME NA TCGA-HC-7736-01A-11R-2118-07 CPNE4-ABCC5 1 13 chr3:132034567:- chr3:183982624:- . NA TCGA-HC-7736-01A-11R-2118-07 ATXN1-GLDN 1 6 chr6:16753233:- chr15:51377449:+ . NA TCGA-HC-7736-01A-11R-2118-07 ENOX2-SMARCA1 1 5 chrX:130703120:- chrX:129471326:- FRAMESHIFT NA TCGA-HC-7737-01A-11R-2118-07 LEPROT-SGIP1 5 5 chr1:65420740:+ chr1:66719294:+ INFRAME NA TCGA-HC-7738-01A-11R-2118-07 AP1AR-NDST4 7 32 chr4:112232174:+ chr4:114870950:- FRAMESHIFT NA TCGA-HC-7740-01A-11R-2118-07 COLEC12-ORM1 23 1 chr18:346771:- chr9:114323659:+ . NA TCGA-HC-7742-01A-11R-2118-07 TMEM97-BLMH 9 27 chr17:28319365:+ chr17:30274197:- INFRAME NA TCGA-HC-7744-01A-11R-2118-07 CDYL2-VEPH1 28 93 chr16:80804150:- chr3:157364512:- FRAMESHIFT NA TCGA-HC-7744-01A-11R-2118-07 TMPRSS2-ERG 19 121 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7744-01A-11R-2118-07 TTC21B-SLC38A11 6 73 chr2:165953685:- chr2:164945727:- FRAMESHIFT NA TCGA-HC-7744-01A-11R-2118-07 MINPP1-LIPJ 9 15 chr10:87521169:+ chr10:88605633:+ FRAMESHIFT NA TCGA-HC-7744-01A-11R-2118-07 ZNF395-SLC25A44 6 20 chr8:28386004:- chr1:156207886:+ . NA TCGA-HC-7744-01A-11R-2118-07 AAK1-KCMF1 4 20 chr2:69642878:- chr2:85027889:+ INFRAME NA TCGA-HC-7744-01A-11R-2118-07 ZNF618-PARP4 1 20 chr9:113876413:+ chr13:24453654:- FRAMESHIFT NA TCGA-HC-7744-01A-11R-2118-07 PRCC-NUGGC 4 1 chr1:156768239:+ chr8:28056054:- INFRAME NA TCGA-HC-7744-01A-11R-2118-07 LDHA-PLA2G2A 1 1 chr11:18403811:+ chr1:19978879:- . NA TCGA-HC-7745-01A-11R-2118-07 TMPRSS2-ERG 3 2 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-HC-7745-01A-11R-2118-07 GRHL2-ANKRD46 2 2 chr8:101664518:+ chr8:100533311:- . NA TCGA-HC-7747-01A-11R-2118-07 TMPRSS2-ERG 23 9 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7747-01A-11R-2118-07 ERG-TMPRSS2 2 7 chr21:38575662:- chr21:41489593:- FRAMESHIFT Oncogenic NA TCGA-HC-7748-01A-11R-2118-07 SLC45A3-ERG 89 592 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-HC-7748-01A-11R-2118-07 CTBP2-METTL10 13 70 chr10:125038997:- chr10:124774782:- INFRAME NA TCGA-HC-7748-01A-11R-2118-07 TOR1A-COG4 5 21 chr9:129814083:- chr16:70490392:- INFRAME NA TCGA-HC-7748-01A-11R-2118-07 SORBS2-ARHGAP27 3 18 chr4:185956196:- chr17:45398047:- . NA TCGA-HC-7748-01A-11R-2118-07 DOCK7-SLC45A3 1 5 chr1:62552732:- chr1:205664886:- . NA TCGA-HC-7749-01A-11R-2118-07 CCDC120-ERAS 7 52 chrX:49059095:+ chrX:48829081:+ . NA TCGA-HC-7749-01A-11R-2118-07 ATMIN-GPR19 1 40 chr16:81036206:+ chr12:12684507:- . NA TCGA-HC-7749-01A-11R-2118-07 BZW1-WDR12 1 24 chr2:200815761:+ chr2:202907959:- FRAMESHIFT NA TCGA-HC-7749-01A-11R-2118-07 MED26-C19orf44 1 12 chr19:16627872:- chr19:16520094:+ . NA TCGA-HC-7752-01A-11R-2118-07 ITCH-PIGU 5 23 chr20:34440344:+ chr20:34560979:- FRAMESHIFT NA TCGA-HC-7752-01A-11R-2118-07 PIGU-MAP1LC3A 1 6 chr20:34575104:- chr20:34559347:+ INFRAME NA TCGA-HC-7752-01A-11R-2118-07 SLC45A3-ERG 1 3 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-HC-7818-01A-11R-2118-07 ZNF329-EPN1 3 54 chr19:58142557:- chr19:55678527:+ . NA TCGA-HC-7818-01A-11R-2118-07 AGO2-DOCK5 4 46 chr8:140532021:- chr8:25415525:+ . NA TCGA-HC-7818-01A-11R-2118-07 ZMYND11-LYZL1 10 14 chr10:135559:+ chr10:29310110:+ . NA TCGA-HC-7818-01A-11R-2118-07 TMPRSS2-ERG 5 8 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-HC-7818-01A-11R-2118-07 ZMYND8-EPPIN 1 10 chr20:47276314:- chr20:45542867:- INFRAME NA TCGA-HC-7818-01A-11R-2118-07 ZMYND8-EPPIN-WFDC6 1 9 chr20:47276314:- chr20:45542867:- INFRAME NA TCGA-HC-7818-01A-11R-2118-07 TBX3-RRM1 1 8 chr12:114680879:- chr11:4106046:+ INFRAME NA TCGA-HC-7818-01A-11R-2118-07 CMTM4-KLHL24 2 2 chr16:66622062:- chr3:183643480:+ . NA TCGA-HC-7818-01A-11R-2118-07 AP3S1-ARL14EPL 1 5 chr5:115842106:+ chr5:116054014:+ INFRAME NA TCGA-HC-7818-01A-11R-2118-07 HECTD4-ANAPC5 1 3 chr12:112381952:- chr12:121337392:- INFRAME NA TCGA-HC-7819-01A-11R-2118-07 TMPRSS2-ERG 45 64 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-7819-01A-11R-2118-07 ULK2-B9D1 1 9 chr17:19864803:- chr17:19347880:- INFRAME NA TCGA-HC-7820-01A-11R-2118-07 SLC45A3-ERG 47 257 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-HC-7820-01A-11R-2118-07 HNRNPD-C4orf22 1 19 chr4:82371528:- chr4:80944810:+ INFRAME NA TCGA-HC-7821-01A-12R-2118-07 SLC45A3-ERG 42 176 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-HC-7821-01A-12R-2118-07 RABGAP1-NIPSNAP3B 12 95 chr9:122998766:+ chr9:104772822:+ FRAMESHIFT NA TCGA-HC-7821-01A-12R-2118-07 RALGAPA2-RSRP1 13 30 chr20:20472756:- chr1:25247029:- . NA TCGA-HC-7821-01A-12R-2118-07 RHEB-LINC-PINT 5 17 chr7:151484737:- chr7:131108803:- . NA TCGA-HC-7821-01A-12R-2118-07 PDE4D-PLPP1 2 21 chr5:59180595:- chr5:55441908:- FRAMESHIFT NA TCGA-HC-7821-01A-12R-2118-07 MKLN1-AMTN 2 15 chr7:131202974:+ chr4:70528723:+ . NA TCGA-HC-7821-01A-12R-2118-07 MIRLET7BHG-DMC1 1 12 chr22:46053920:+ chr22:38568289:- . NA TCGA-HC-7821-01A-12R-2118-07 ARID1A-SEC11A 1 9 chr1:26767999:+ chr15:84691644:- INFRAME Likely Oncogenic NA TCGA-HC-7821-01A-12R-2118-07 C5-BRINP1 1 9 chr9:121032113:- chr9:119168224:- FRAMESHIFT NA TCGA-HC-7821-01A-12R-2118-07 NEK1-CBR4 1 7 chr4:169507037:- chr4:168894765:- . NA TCGA-HC-7821-01A-12R-2118-07 AATK-FOXP1 1 5 chr17:81119380:- chr3:71299880:- . Likely Oncogenic NA TCGA-HC-7821-01A-12R-2118-07 SLC39A8-RHEB 2 1 chr4:102344444:- chr7:151477415:- INFRAME NA TCGA-HC-7821-01A-12R-2118-07 TDRD7-GNA14 1 3 chr9:97432238:+ chr9:77529253:- FRAMESHIFT NA TCGA-HC-8213-01A-11R-A29R-07 TMPRSS2-ERG 11 18 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-8213-01A-11R-A29R-07 TMPRSS2-TMEM109 1 20 chr21:41488394:- chr11:60919686:+ . Likely Oncogenic NA TCGA-HC-8216-01A-11R-A29R-07 SORD-ADPGK 5 18 chr15:45023349:+ chr15:72785846:- . NA TCGA-HC-8216-01A-11R-A29R-07 TMPRSS2-TMEM109 4 11 chr21:41488394:- chr11:60919686:+ . Likely Oncogenic NA TCGA-HC-8216-01A-11R-A29R-07 KIF18B-TUBG1 3 13 chr17:44947628:- chr17:42612075:+ . NA TCGA-HC-8216-01A-11R-A29R-07 MITF-ARL6IP5 3 7 chr3:69739701:+ chr3:69101839:+ INFRAME NA TCGA-HC-8216-01A-11R-A29R-07 IL17RE-SLC3A2 4 1 chr3:9909283:+ chr11:62882908:+ INFRAME NA TCGA-HC-8216-01A-11R-A29R-07 MIPEP-C1QTNF9B 2 1 chr13:23756545:- chr13:23897226:- . NA TCGA-HC-8216-01A-11R-A29R-07 SMURF2-DEDD2 1 4 chr17:64661829:- chr19:42217045:- . NA TCGA-HC-8216-01A-11R-A29R-07 JMJD1C-YWHAZ 1 1 chr10:63200476:- chr8:100925039:- FRAMESHIFT NA TCGA-HC-8256-01A-11R-2263-07 PAPD7-RAF1 12 34 chr5:6751197:+ chr3:12599808:- INFRAME Likely Oncogenic NA TCGA-HC-8256-01A-11R-2263-07 RAF1-PHC3 7 22 chr3:12599691:- chr3:170097384:- INFRAME Likely Oncogenic NA TCGA-HC-8257-01A-11R-2263-07 TMPRSS2-ERG 16 98 chr21:41498119:- chr21:38584945:- . Oncogenic NA TCGA-HC-8257-01A-11R-2263-07 LRRC7-RRP15 9 21 chr1:69568641:+ chr1:218330948:+ FRAMESHIFT NA TCGA-HC-8257-01A-11R-2263-07 DYNLRB1-CNBD2 3 15 chr20:34526343:+ chr20:36008297:+ INFRAME NA TCGA-HC-8258-01A-11R-2263-07 BMPR2-MARCH4 9 36 chr2:202542447:+ chr2:216259679:- FRAMESHIFT NA TCGA-HC-8260-01A-11R-2263-07 PLPP1-CDC42SE2 33 97 chr5:55467869:- chr5:131359209:+ . NA TCGA-HC-8260-01A-11R-2263-07 TMPRSS2-ERG 24 11 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-8260-01A-11R-2263-07 ZBTB4-SLC22A4 3 17 chr17:7462419:- chr5:132334718:+ FRAMESHIFT NA TCGA-HC-8260-01A-11R-2263-07 SLC45A3-CPNE4 2 13 chr1:205661861:- chr3:132040321:- . NA TCGA-HC-8260-01A-11R-2263-07 COG6-DNAJC15 1 3 chr13:39724561:+ chr13:43085768:+ FRAMESHIFT NA TCGA-HC-8260-01A-11R-2263-07 H2AFV-UBASH3A 1 2 chr7:44847969:- chr21:42403916:+ . NA TCGA-HC-8260-01A-11R-2263-07 MTRR-SLC30A5 1 2 chr5:7878322:+ chr5:69117239:+ INFRAME NA TCGA-HC-8261-01A-11R-2263-07 NPAT-SLN 3 108 chr11:108222500:- chr11:107712162:- . NA TCGA-HC-8262-01A-11R-2263-07 SHOC2-TMEM178A 93 22 chr10:110919657:+ chr2:39704081:+ . NA TCGA-HC-8262-01A-11R-2263-07 TMPRSS2-ERG 25 149 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-HC-8262-01A-11R-2263-07 CCT3-GON4L 6 32 chr1:156333547:- chr1:155832950:- . NA TCGA-HC-8262-01A-11R-2263-07 MYO6-NEGR1 4 13 chr6:75848531:+ chr1:71698139:- INFRAME NA TCGA-HC-8262-01A-11R-2263-07 PLEKHH2-VSNL1 1 10 chr2:43644796:+ chr2:17567380:+ . NA TCGA-HC-8262-01A-11R-2263-07 ZNF821-CHD9 1 6 chr16:71879907:- chr16:53235185:+ FRAMESHIFT NA TCGA-HC-8262-01A-11R-2263-07 SRRM1-NFYC 1 4 chr1:24646073:+ chr1:40738836:+ . NA TCGA-HC-8262-01A-11R-2263-07 PHGDH-NEGR1 1 3 chr1:119737266:+ chr1:71776297:- FRAMESHIFT NA TCGA-HC-8262-01A-11R-2263-07 NFYC-SLC4A4 1 1 chr1:40691867:+ chr4:71236576:+ . NA TCGA-HC-8262-01A-11R-2263-07 RAB3B-NRDC 1000 1000 chr1:51933318:- chr1:51840514:- FRAMESHIFT NA TCGA-HC-8264-01B-11R-2403-07 CD63-PKP2 31 219 chr12:55725570:- chr12:32802556:- INFRAME NA TCGA-HC-8264-01B-11R-2403-07 PKP2-SARNP 2 3 chr12:32802403:- chr12:55760640:- FRAMESHIFT NA TCGA-HC-8264-01B-11R-2403-07 SND1-LEP 1 4 chr7:127707647:+ chr7:128251991:+ . NA TCGA-HC-8264-01B-11R-2403-07 SYNE3-GSC 1 1 chr14:95475678:- chr14:94769217:- FRAMESHIFT NA TCGA-HC-8265-01A-11R-2263-07 SMARCC1-SPINK8 64 376 chr3:47736034:- chr3:48309946:- FRAMESHIFT NA TCGA-HC-8265-01A-11R-2263-07 BAZ1B-POMZP3 15 30 chr7:73459536:- chr7:76611813:- INFRAME NA TCGA-HC-8265-01A-11R-2263-07 GABRG3-SNHG14 7 40 chr15:27026821:+ chr15:25338011:+ . NA TCGA-HC-8265-01A-11R-2263-07 SPEN-TNFRSF1B 3 29 chr1:15916279:+ chr1:12201967:+ INFRAME Likely Oncogenic NA TCGA-HC-8265-01A-11R-2263-07 FRS2-RASSF3 2 14 chr12:69470530:+ chr12:64684787:+ . NA TCGA-HC-8265-01A-11R-2263-07 RANBP3-MLLT1 2 14 chr19:5924827:- chr19:6270759:- INFRAME NA TCGA-HC-8265-01A-11R-2263-07 SS18-DOCK2 2 13 chr18:26032399:- chr5:169840757:+ INFRAME NA TCGA-HC-8265-01A-11R-2263-07 MAPK8IP3-TELO2 1 15 chr16:1763006:+ chr16:1501663:+ INFRAME NA TCGA-HC-8265-01A-11R-2263-07 ELK4-SLC26A9 3 5 chr1:205623676:- chr1:205935838:- . NA TCGA-HC-8265-01A-11R-2263-07 PTPRA-PSMF1 2 5 chr20:2988474:+ chr20:1135121:+ FRAMESHIFT NA TCGA-HC-8265-01A-11R-2263-07 DIP2A-COL6A2 1 8 chr21:46541895:+ chr21:46111450:+ . NA TCGA-HC-8265-01A-11R-2263-07 EXOC5-SLC35F4 1 5 chr14:57268622:- chr14:57594124:- FRAMESHIFT NA TCGA-HC-8265-01A-11R-2263-07 GATAD2B-KCNN3 1 3 chr1:153922733:- chr1:154772393:- . NA TCGA-HC-8265-01A-11R-2263-07 ITCH-DEFB123 1 3 chr20:34369470:+ chr20:31450029:+ . NA TCGA-HC-8265-01A-11R-2263-07 LRRC58-FSTL1 1 1 chr3:120348744:- chr3:120416027:- FRAMESHIFT NA TCGA-HC-8265-01A-11R-2263-07 BAZ1B-ZP3 1000 1000 chr7:73459536:- chr7:76440250:+ INFRAME NA TCGA-HC-8266-01A-11R-2263-07 MAK-INTS12 3 16 chr6:10791675:- chr4:105683317:- FRAMESHIFT NA TCGA-HC-8266-01A-11R-2263-07 KDM2B-SLC9A5 4 9 chr12:121574547:- chr16:67270738:+ INFRAME NA TCGA-HC-8266-01A-11R-2263-07 PPP3CA-INTS12 2 11 chr4:101195916:- chr4:105683317:- FRAMESHIFT NA TCGA-HC-8266-01A-11R-2263-07 PPP3CA-PPIL1 2 6 chr4:101346739:- chr6:36871872:- FRAMESHIFT NA TCGA-HC-8266-01A-11R-2263-07 PPP3CA-MAK 1 6 chr4:101195916:- chr6:10796309:- FRAMESHIFT NA TCGA-HC-A48F-01A-11R-A250-07 TP53-DHX33 27 85 chr17:7675121:- chr17:5443834:- . Likely Oncogenic NA TCGA-HC-A48F-01A-11R-A250-07 TMPRSS2-ERG 38 28 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-A48F-01A-11R-A250-07 CLHC1-FAM98A 3 9 chr2:55228032:- chr2:33587320:- . NA TCGA-HC-A48F-01A-11R-A250-07 UBXN6-STOX2 2 4 chr19:4452364:- chr4:184001325:+ INFRAME NA TCGA-HC-A4ZV-01A-11R-A26U-07 NFIX-CAPN12 43 277 chr19:13081855:+ chr19:38742528:- FRAMESHIFT NA TCGA-HC-A4ZV-01A-11R-A26U-07 ZFHX3-PMFBP1 2 11 chr16:73058530:- chr16:72120089:- . NA TCGA-HC-A4ZV-01A-11R-A26U-07 GSK3B-LSAMP 2 7 chr3:119947268:- chr3:116019640:- FRAMESHIFT NA TCGA-HC-A4ZV-01A-11R-A26U-07 TRAPPC2-GPM6B 1 6 chrX:13734525:- chrX:13785808:- . NA TCGA-HC-A4ZV-01A-11R-A26U-07 ODF2-COQ4 1 1 chr9:128482887:+ chr9:128332850:+ FRAMESHIFT NA TCGA-HC-A631-01A-11R-A29R-07 WDR34-PCA3 160 744 chr9:128640691:- chr9:76784283:+ . NA TCGA-HC-A631-01A-11R-A29R-07 HDLBP-TMC1 61 643 chr2:241247056:- chr9:72830451:+ FRAMESHIFT NA TCGA-HC-A631-01A-11R-A29R-07 TTC32-HDLBP 26 302 chr2:19901476:- chr2:241230944:- . NA TCGA-HC-A631-01A-11R-A29R-07 CKB-CYB5R3 2 1 chr14:103522301:- chr22:42630988:- INFRAME NA TCGA-HC-A631-01A-11R-A29R-07 DHX9-FBXO7 1 4 chr1:182867043:+ chr22:32478981:+ FRAMESHIFT NA TCGA-HC-A631-01A-11R-A29R-07 CPEB3-PRIM1 1 3 chr10:92081320:- chr12:56747032:- INFRAME NA TCGA-HC-A632-01A-11R-A29R-07 SLC22A23-CAMTA1 15 104 chr6:3410188:- chr1:6820181:+ INFRAME NA TCGA-HC-A632-01A-11R-A29R-07 TM9SF4-ZNF423 13 57 chr20:32136173:+ chr16:49789546:- INFRAME NA TCGA-HC-A632-01A-11R-A29R-07 TMPRSS2-ERG 5 85 chr21:41498119:- chr21:38584945:- . Oncogenic NA TCGA-HC-A632-01A-11R-A29R-07 MAP7-MAP3K5 5 30 chr6:136356692:- chr6:136639638:- INFRAME NA TCGA-HC-A632-01A-11R-A29R-07 VPS29-SVOP 6 24 chr12:110502049:- chr12:108912741:- INFRAME NA TCGA-HC-A632-01A-11R-A29R-07 SLC10A7-EYS 2 7 chr4:146521618:- chr6:65057727:- INFRAME NA TCGA-HC-A632-01A-11R-A29R-07 LRRC61-TFCP2 1 1 chr7:150326010:+ chr12:51118772:- . NA TCGA-HC-A6AL-01A-11R-A30B-07 BANK1-AGMO 8 40 chr4:102043907:+ chr7:15201359:- FRAMESHIFT NA TCGA-HC-A6AN-01A-11R-A30B-07 SLC45A3-ERG 37 216 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-HC-A6AN-01A-11R-A30B-07 ERCC6L2-IPPK 3 3 chr9:95970656:+ chr9:92635308:- FRAMESHIFT NA TCGA-HC-A6AN-01A-11R-A30B-07 LARP4B-WASHC2C 2 4 chr10:863743:- chr10:45784565:+ FRAMESHIFT NA TCGA-HC-A6AN-01A-11R-A30B-07 USP22-ATP2A3 2 2 chr17:21042665:- chr17:3945148:- INFRAME NA TCGA-HC-A6AN-01A-11R-A30B-07 DHCR24-ERCC6L2 1 5 chr1:54875942:- chr9:95970576:+ FRAMESHIFT NA TCGA-HC-A6AN-01A-11R-A30B-07 MBD5-GRM7 1 3 chr2:148021684:+ chr3:7146452:+ . NA TCGA-HC-A6AP-01A-11R-A30B-07 CHD1-SLCO6A1 17 26 chr5:98892525:- chr5:102413143:- INFRAME NA TCGA-HC-A6AP-01A-11R-A30B-07 GLO1-KIF6 3 5 chr6:38702971:- chr6:39420003:- FRAMESHIFT NA TCGA-HC-A6AP-01A-11R-A30B-07 CHCHD6-MYLK 2 4 chr3:126704399:+ chr3:123831670:- . NA TCGA-HC-A6AP-01A-11R-A30B-07 SEC31A-ANAPC10 1 7 chr4:82878730:- chr4:144995603:- INFRAME NA TCGA-HC-A6AQ-01A-11R-A30B-07 SLC45A3-ETV1 11 33 chr1:205680394:- chr7:13939246:- . Likely Oncogenic NA TCGA-HC-A6AS-01A-11R-A30B-07 SERINC5-PLPP1 46 69 chr5:80255896:- chr5:55426039:- INFRAME NA TCGA-HC-A6HY-01A-11R-A31N-07 TMPRSS2-ERG 24 28 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-A6HY-01A-11R-A31N-07 PTPN1-BCAS4 6 26 chr20:50510590:+ chr20:50818211:+ INFRAME NA TCGA-HC-A6HY-01A-11R-A31N-07 USP28-TMPRSS2 1 3 chr11:113804673:- chr21:41468538:- FRAMESHIFT Likely Oncogenic NA TCGA-HC-A76W-01A-11R-A33R-07 SEMA4C-IGFBP2 2 12 chr2:96863926:- chr2:216660557:+ INFRAME NA TCGA-HC-A76X-01A-11R-A33R-07 TMPRSS2-ERG 96 349 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-HC-A76X-01A-11R-A33R-07 KCMF1-GGCX 1 6 chr2:84971467:+ chr2:85556260:- FRAMESHIFT NA TCGA-HC-A76X-01A-11R-A33R-07 GGCX-KCMF1 1 2 chr2:85560815:- chr2:85027889:+ INFRAME NA TCGA-HC-A8CY-01A-11R-A36G-07 SLC45A3-ETV1 275 914 chr1:205680394:- chr7:13939246:- . Likely Oncogenic NA TCGA-HC-A8CY-01A-11R-A36G-07 RAI1-PEX1 3 35 chr17:17810855:+ chr7:92518918:- . NA TCGA-HC-A8CY-01A-11R-A36G-07 BANP-SF3A3 4 6 chr16:88027650:+ chr1:37984779:- FRAMESHIFT NA TCGA-HC-A8CY-01A-11R-A36G-07 FNIP2-SLC35A3 2 5 chr4:158895865:+ chr1:99993537:+ FRAMESHIFT NA TCGA-HC-A8D0-01A-11R-A36G-07 TMPRSS2-ERG 10 36 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-A8D0-01A-11R-A36G-07 PRRC2B-SPACA9 6 6 chr9:131394263:+ chr9:132883911:+ . NA TCGA-HC-A8D0-01A-11R-A36G-07 PER2-SEPT2 3 14 chr2:238246291:- chr2:241315570:+ . NA TCGA-HC-A8D0-01A-11R-A36G-07 STAT5B-PFAS 4 9 chr17:42210171:- chr17:8262920:+ INFRAME NA TCGA-HC-A8D0-01A-11R-A36G-07 RALGAPA1-SLC25A21 1 2 chr14:35808730:- chr14:36875004:- INFRAME NA TCGA-HC-A8D1-01A-11R-A36G-07 TMPRSS2-ERG 41 40 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HC-A9TE-01A-11R-A41O-07 DROSHA-UGT3A2 5 7 chr5:31526079:- chr5:36064350:- INFRAME NA TCGA-HC-A9TE-01A-11R-A41O-07 PHF3-AKR1C1 1 3 chr6:63636150:+ chr10:4965914:+ . NA TCGA-HC-A9TE-01A-11R-A41O-07 URB1-CRYZL1 1 3 chr21:32373647:- chr21:33631557:- INFRAME NA TCGA-HC-A9TH-01A-11R-A41O-07 KIAA1671-SEC14L2 4 10 chr22:25049364:+ chr22:30399643:+ INFRAME NA TCGA-HC-A9TH-01A-11R-A41O-07 MPND-RABEP1 1 12 chr19:4343600:+ chr17:5361208:+ FRAMESHIFT NA TCGA-HC-A9TH-01A-11R-A41O-07 PTPRG-FRMD4B 1 11 chr3:61748982:+ chr3:69176656:- INFRAME NA TCGA-HI-7168-01A-11R-2118-07 BCL2L13-GAB4 66 310 chr22:17655832:+ chr22:16965268:- INFRAME NA TCGA-HI-7168-01A-11R-2118-07 UBE2R2-ITLN1 9 29 chr9:33900271:+ chr1:160876816:- FRAMESHIFT NA TCGA-HI-7171-01A-12R-2118-07 TMPRSS2-IRS2 142 1091 chr21:41488394:- chr13:109756308:- INFRAME Likely Oncogenic NA TCGA-HI-7171-01A-12R-2118-07 HNRNPK-SLC16A11 43 373 chr9:83974241:- chr17:7041728:- . NA TCGA-HI-7171-01A-12R-2118-07 TMPRSS2-ERG 33 117 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-HI-7171-01A-12R-2118-07 CUX2-ANAPC11 6 45 chr12:111034240:+ chr17:81894467:+ . NA TCGA-HI-7171-01A-12R-2118-07 PART1-NDUFAF2 8 33 chr5:60488423:+ chr5:61073125:+ . NA TCGA-HI-7171-01A-12R-2118-07 DNAH2-WRAP53 3 41 chr17:7823967:+ chr17:7687377:+ . NA TCGA-HI-7171-01A-12R-2118-07 EIF4G2-RSPO2 5 17 chr11:10807255:- chr8:108082807:- . NA TCGA-HI-7171-01A-12R-2118-07 GPS2-RBFOX3 3 16 chr17:7314488:- chr17:79307824:- . NA TCGA-HI-7171-01A-12R-2118-07 ANO7-PKNOX1 3 7 chr2:241218381:+ chr21:43004326:+ . NA TCGA-HI-7171-01A-12R-2118-07 DENND1A-PBX3 1 7 chr9:123583169:- chr9:125929655:+ INFRAME NA TCGA-HI-7171-01A-12R-2118-07 EED-TPCN2 1 6 chr11:86245343:+ chr11:69067503:+ INFRAME NA TCGA-HI-7171-01A-12R-2118-07 TTC25-ARHGDIA 1 3 chr17:41930837:+ chr17:81869957:- . NA TCGA-HI-7171-01A-12R-2118-07 CPNE4-MRPL3 1 2 chr3:132034567:- chr3:131501715:- . NA TCGA-HI-7171-01A-12R-2118-07 PBX3-MVB12B 1 2 chr9:125748623:+ chr9:126340508:+ FRAMESHIFT NA TCGA-HI-7171-01A-12R-2118-07 ABR-GEMIN4 1 1 chr17:1050050:- chr17:748032:- FRAMESHIFT NA TCGA-J4-8198-01A-11R-2263-07 TMPRSS2-ERG 59 24 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-8198-01A-11R-2263-07 SORBS2-ELK4 4 19 chr4:185811664:- chr1:205598649:- . NA TCGA-J4-8198-01A-11R-2263-07 GPATCH8-NAGS 3 8 chr17:44474829:- chr17:44004701:+ FRAMESHIFT NA TCGA-J4-8198-01A-11R-2263-07 ACTR2-SORBS2 1 6 chr2:65255694:+ chr4:185775366:- . NA TCGA-J4-8200-01A-11R-A29R-07 THAP4-BOK 1 19 chr2:241601896:- chr2:241570125:+ FRAMESHIFT NA TCGA-J4-A67K-01A-21R-A30B-07 TMPRSS2-ERG 20 62 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-J4-A67K-01A-21R-A30B-07 LINC-PINT-ORC5 8 24 chr7:131052425:- chr7:104168525:- . NA TCGA-J4-A67K-01A-21R-A30B-07 MED4-DCLK1 5 7 chr13:48077153:- chr13:35947457:- FRAMESHIFT NA TCGA-J4-A67K-01A-21R-A30B-07 DHX30-ZDHHC3 3 13 chr3:47841737:+ chr3:44959460:- . NA TCGA-J4-A67K-01A-21R-A30B-07 XBP1-MIR22HG 4 4 chr22:28800298:- chr17:1716272:- . NA TCGA-J4-A67K-01A-21R-A30B-07 KIF1C-NDEL1 2 7 chr17:5014837:+ chr17:8444260:+ . NA TCGA-J4-A67K-01A-21R-A30B-07 NDEL1-DHX30 2 5 chr17:8448686:+ chr3:47827347:+ INFRAME NA TCGA-J4-A67K-01A-21R-A30B-07 ZFP64-NDRG3 1 5 chr20:52186832:- chr20:36656532:- FRAMESHIFT NA TCGA-J4-A67K-01A-21R-A30B-07 NDEL1-KIF1C 1 4 chr17:8436045:+ chr17:5014743:+ . NA TCGA-J4-A67L-01A-11R-A30B-07 TMPRSS2-ERG 5 6 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A67L-01A-11R-A30B-07 SMAD4-SKAP1 3 9 chr18:51067187:+ chr17:48396785:- FRAMESHIFT Likely Oncogenic NA TCGA-J4-A67M-01A-11R-A30B-07 EFTUD2-SIN3A 3 8 chr17:44854269:- chr15:75372209:- FRAMESHIFT NA TCGA-J4-A67M-01A-11R-A30B-07 OS9-C12orf10 2 1 chr12:57696373:+ chr12:53306680:+ INFRAME NA TCGA-J4-A67N-01A-11R-A30B-07 PLPP1-ARL15 3 6 chr5:55534572:- chr5:54171928:- FRAMESHIFT NA TCGA-J4-A67N-01A-11R-A30B-07 TOX2-EIF5A 1 12 chr20:44006792:+ chr17:7309615:+ INFRAME NA TCGA-J4-A67N-01A-11R-A30B-07 PLPP1-MAPK1 2 4 chr5:55534572:- chr22:21788808:- FRAMESHIFT NA TCGA-J4-A67N-01A-11R-A30B-07 TMPRSS2-ERG 2 3 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-J4-A67Q-01A-21R-A30B-07 FDPS-IPO9 2 5 chr1:155312395:+ chr1:201871161:+ INFRAME NA TCGA-J4-A67R-01A-21R-A30B-07 ST6GAL1-PSMC3 11 52 chr3:186963926:+ chr11:47426282:- . NA TCGA-J4-A67R-01A-21R-A30B-07 TMPRSS2-ERG 9 4 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A67S-01A-11R-A30B-07 RNF41-SARNP 119 596 chr12:56221760:- chr12:55752840:- . NA TCGA-J4-A67S-01A-11R-A30B-07 TMPRSS2-ERG 27 34 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A67S-01A-11R-A30B-07 CASZ1-PRKD2 3 14 chr1:10650692:- chr19:46681748:- INFRAME NA TCGA-J4-A67S-01A-11R-A30B-07 ASB8-DGKA 1 12 chr12:48153368:- chr12:55936423:+ . NA TCGA-J4-A67S-01A-11R-A30B-07 ERG-TMPRSS2 3 4 chr21:38575662:- chr21:41498189:- FRAMESHIFT Oncogenic NA TCGA-J4-A67S-01A-11R-A30B-07 NDUFAF2-UBC 3 1 chr5:60945382:+ chr12:124913774:- . NA TCGA-J4-A67S-01A-11R-A30B-07 PRKD2-GLUD1 2 1 chr19:46689537:- chr10:87059273:- INFRAME NA TCGA-J4-A67T-01A-11R-A311-07 CPD-HDAC5 77 126 chr17:30385236:+ chr17:44093834:- INFRAME NA TCGA-J4-A67T-01A-11R-A311-07 LIMCH1-HOPX 7 39 chr4:41360936:+ chr4:56656012:- INFRAME NA TCGA-J4-A67T-01A-11R-A311-07 TMPRSS2-ERG 7 10 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-J4-A67T-01A-11R-A311-07 SSFA2-PTPN4 1 3 chr2:181922412:+ chr2:119862536:+ INFRAME NA TCGA-J4-A6G1-01A-11R-A311-07 TMPRSS2-ERG 10 9 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A6G1-01A-11R-A311-07 FNBP4-MYBPC3 3 12 chr11:47731374:- chr11:47351505:- INFRAME NA TCGA-J4-A6G1-01A-11R-A311-07 CLUAP1-NAA60 2 7 chr16:3501089:+ chr16:3479471:+ FRAMESHIFT NA TCGA-J4-A6G3-01A-11R-A311-07 ACPP-AXL 42 108 chr3:132356855:+ chr19:41242883:+ INFRAME NA TCGA-J4-A6G3-01A-11R-A311-07 NOL10-HDAC1 1 1 chr2:10654481:- chr1:32316665:+ FRAMESHIFT NA TCGA-J4-A6M7-01A-11R-A31N-07 TMPRSS2-ERG 44 160 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A6M7-01A-11R-A31N-07 TMEM179B-SLC22A10 4 61 chr11:62789426:+ chr11:63297303:+ INFRAME NA TCGA-J4-A83I-01A-11R-A36G-07 TMPRSS2-ERG 83 82 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A83I-01A-11R-A36G-07 CASZ1-DLEU1 53 185 chr1:10693874:- chr13:50527866:+ . NA TCGA-J4-A83I-01A-11R-A36G-07 ATAD1-JMJD1C 8 6 chr10:87770952:- chr10:63209235:- INFRAME NA TCGA-J4-A83I-01A-11R-A36G-07 CCT7-WDPCP 3 18 chr2:73244715:+ chr2:63711591:- . NA TCGA-J4-A83I-01A-11R-A36G-07 KCNMB4-RTKN2 2 21 chr12:70367070:+ chr10:62236263:- FRAMESHIFT NA TCGA-J4-A83I-01A-11R-A36G-07 MGA-SCD 1 18 chr15:41621298:+ chr10:100348064:+ . Likely Oncogenic NA TCGA-J4-A83I-01A-11R-A36G-07 PDIA3-RPAP1 2 9 chr15:43746706:+ chr15:41537201:- . NA TCGA-J4-A83I-01A-11R-A36G-07 ADAMTS17-RTKN2 2 8 chr15:99997385:- chr10:62262821:- INFRAME NA TCGA-J4-A83I-01A-11R-A36G-07 GRM7-MBD2 1 9 chr3:7146668:+ chr18:54189011:- FRAMESHIFT NA TCGA-J4-A83I-01A-11R-A36G-07 LRP3-LSM14A 2 5 chr19:33194858:+ chr19:34194478:+ INFRAME NA TCGA-J4-A83I-01A-11R-A36G-07 FUT10-TDRP 1 3 chr8:33453216:- chr8:494597:- FRAMESHIFT NA TCGA-J4-A83K-01A-11R-A352-07 TMPRSS2-ERG 46 71 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J4-A83M-01A-11R-A352-07 SLC45A3-ETV1 100 563 chr1:205680394:- chr7:13977480:- . Likely Oncogenic NA TCGA-J4-A83M-01A-11R-A352-07 FBXO18-FRMD4A 2 3 chr10:5890346:+ chr10:13675044:- INFRAME NA TCGA-J4-A83N-01A-11R-A352-07 SLC45A3-ERG 41 248 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-J4-A83N-01A-11R-A352-07 FOXP1-COQ10B 1 8 chr3:71041328:- chr2:197470070:+ FRAMESHIFT Likely Oncogenic NA TCGA-J4-AATV-01A-11R-A41O-07 SLC45A3-FAF1 3 18 chr1:205680394:- chr1:50475679:- . NA TCGA-J4-AATV-01A-11R-A41O-07 TMPRSS2-ERG 1 9 chr21:41498119:- chr21:38474121:- . Oncogenic NA TCGA-J4-AATZ-01A-11R-A41O-07 ETV6-PDE6H 39 91 chr12:11650160:+ chr12:14977972:+ . Likely Oncogenic NA TCGA-J4-AATZ-01A-11R-A41O-07 SEL1L-ANGEL1 10 49 chr14:81485672:- chr14:76809643:- INFRAME NA TCGA-J4-AATZ-01A-11R-A41O-07 SERINC5-ATP8B5P 7 24 chr5:80255896:- chr9:35444385:+ . NA TCGA-J4-AATZ-01A-11R-A41O-07 SMAD9-CCNA1 5 25 chr13:36853419:- chr13:36433033:+ INFRAME NA TCGA-J4-AATZ-01A-11R-A41O-07 KDM7A-AGK 3 25 chr7:140176744:- chr7:141649263:+ FRAMESHIFT NA TCGA-J4-AATZ-01A-11R-A41O-07 GGT1-PRODH 3 20 chr22:24594886:+ chr22:18931198:- . NA TCGA-J4-AATZ-01A-11R-A41O-07 TESK1-ATP8B5P 5 9 chr9:35606285:+ chr9:35433707:+ . NA TCGA-J4-AATZ-01A-11R-A41O-07 AGL-ARHGDIB 1 20 chr1:99916731:+ chr12:14950724:- . NA TCGA-J4-AATZ-01A-11R-A41O-07 PRR15L-GPATCH8 3 10 chr17:47957657:- chr17:44406051:- . NA TCGA-J4-AATZ-01A-11R-A41O-07 CORO2A-KBTBD4 2 13 chr9:98192559:- chr11:47578028:- . NA TCGA-J4-AATZ-01A-11R-A41O-07 MARK1-C1orf115 2 8 chr1:220581118:+ chr1:220696612:+ INFRAME NA TCGA-J4-AATZ-01A-11R-A41O-07 ITCH-EYA2 2 4 chr20:34369470:+ chr20:47143059:+ . NA TCGA-J4-AATZ-01A-11R-A41O-07 GRK3-ZNRF3 1 6 chr22:25565153:+ chr22:28987076:+ FRAMESHIFT NA TCGA-J4-AATZ-01A-11R-A41O-07 TCF12-C14orf1 1 2 chr15:57063823:+ chr14:75651889:- FRAMESHIFT NA TCGA-J9-A52B-01A-11R-A26U-07 TMPRSS2-ERG 40 259 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-J9-A52B-01A-11R-A26U-07 CYB561-PHB 7 22 chr17:63446245:- chr17:49405204:- . NA TCGA-J9-A52B-01A-11R-A26U-07 PLEKHM1-NT5C3B 2 8 chr17:45468209:- chr17:41828952:- FRAMESHIFT NA TCGA-J9-A52C-01A-11R-A26U-07 CERK-NSMAF 1 2 chr22:46720086:- chr8:58584200:- INFRAME NA TCGA-J9-A52E-01A-11R-A26U-07 ELOA-ZCCHC11 1 20 chr1:23757125:+ chr1:52408460:- INFRAME NA TCGA-J9-A52E-01A-11R-A26U-07 ZNF589-ALS2CL 1 6 chr3:48257022:+ chr3:46689465:- . NA TCGA-J9-A52E-01A-11R-A26U-07 FGF13-DYM 2 1 chrX:138857512:- chr18:49163787:- FRAMESHIFT NA TCGA-J9-A8CK-01A-11R-A352-07 TMPRSS2-ERG 118 152 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-J9-A8CK-01A-11R-A352-07 MAN2C1-GAMT 16 28 chr15:75355567:- chr19:1397499:- . NA TCGA-J9-A8CK-01A-11R-A352-07 SMG6-C10orf11 7 37 chr17:2172658:- chr10:76557209:+ FRAMESHIFT NA TCGA-J9-A8CK-01A-11R-A352-07 PI4K2A-AS3MT 10 15 chr10:97667120:+ chr10:102890544:+ INFRAME NA TCGA-J9-A8CK-01A-11R-A352-07 USP1-EFCAB7 3 27 chr1:62437400:+ chr1:63561709:+ . NA TCGA-J9-A8CK-01A-11R-A352-07 VKORC1L1-RABGEF1 2 7 chr7:65873565:+ chr7:66805140:+ FRAMESHIFT NA TCGA-J9-A8CK-01A-11R-A352-07 LINC-PINT-ATP6V0A4 1 10 chr7:131107720:- chr7:138745280:- . NA TCGA-J9-A8CK-01A-11R-A352-07 HNRNPC-WRN 2 4 chr14:21230319:- chr8:31172995:+ FRAMESHIFT NA TCGA-J9-A8CL-01A-11R-A352-07 MOB1B-AMBN 30 84 chr4:70902550:+ chr4:70592317:+ . NA TCGA-J9-A8CL-01A-11R-A352-07 GPR107-GARNL3 9 50 chr9:130099532:+ chr9:127393083:+ FRAMESHIFT NA TCGA-J9-A8CL-01A-11R-A352-07 ABHD18-SLC25A31 14 12 chr4:127989821:+ chr4:127773386:+ FRAMESHIFT NA TCGA-J9-A8CL-01A-11R-A352-07 AGAP1-SP140L 7 29 chr2:235494849:+ chr2:230396757:+ FRAMESHIFT NA TCGA-J9-A8CL-01A-11R-A352-07 PIAS1-ZNF609 5 6 chr15:68054350:+ chr15:64678116:+ INFRAME NA TCGA-J9-A8CL-01A-11R-A352-07 FIG4-CCDC162P 2 12 chr6:109691501:+ chr6:109227446:+ . NA TCGA-J9-A8CL-01A-11R-A352-07 CBL-CXCR5 2 6 chr11:119232695:+ chr11:118893596:+ FRAMESHIFT Likely Oncogenic NA TCGA-J9-A8CL-01A-11R-A352-07 MYO9A-PARP6 1 3 chr15:72027731:- chr15:72258132:- INFRAME NA TCGA-J9-A8CM-01A-11R-A352-07 TMPRSS2-ERG 13 44 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-J9-A8CM-01A-11R-A352-07 FOCAD-C10orf90 1 6 chr9:20990374:+ chr10:126505085:- INFRAME NA TCGA-J9-A8CN-01A-11R-A352-07 CHD6-SNX21 9 51 chr20:41415185:- chr20:45840433:+ . NA TCGA-J9-A8CN-01A-11R-A352-07 MAPRE1-TM9SF4 11 27 chr20:32839856:+ chr20:32133013:+ INFRAME NA TCGA-J9-A8CN-01A-11R-A352-07 EFCAB8-TNNC2 5 13 chr20:32896527:+ chr20:45824834:- INFRAME NA TCGA-J9-A8CP-01A-11R-A352-07 ZNF716-C7orf72 23 148 chr7:57450327:+ chr7:50151450:+ FRAMESHIFT NA TCGA-J9-A8CP-01A-11R-A352-07 FOCAD-PDZRN4 3 15 chr9:20789608:+ chr12:41552656:+ INFRAME NA TCGA-J9-A8CP-01A-11R-A352-07 PRR16-MALRD1 4 7 chr5:120464645:+ chr10:19066719:+ FRAMESHIFT NA TCGA-KC-A4BL-01A-31R-A250-07 PLPP1-HCN1 4 5 chr5:55534572:- chr5:45353246:- FRAMESHIFT NA TCGA-KC-A4BL-01A-31R-A250-07 TTLL1-MCAT 1 3 chr22:43051801:- chr22:43141249:- INFRAME NA TCGA-KC-A4BN-01A-61R-A250-07 TMPRSS2-ERG 8 17 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KC-A4BN-01A-61R-A250-07 RPS17-CHAF1B 5 15 chr15:82538306:- chr21:36387598:+ INFRAME NA TCGA-KC-A4BN-01A-61R-A250-07 HMGN2P46-TMPRSS2 2 26 chr15:45515892:+ chr21:41498189:- . Likely Oncogenic NA TCGA-KC-A4BR-01A-32R-A32Y-07 TMPRSS2-GUCA2A 106 120 chr21:41508081:- chr1:42163610:- . Likely Oncogenic NA TCGA-KC-A4BR-01A-32R-A32Y-07 GUCA2A-ERG 41 62 chr1:42163403:- chr21:38445621:- FRAMESHIFT Likely Oncogenic NA TCGA-KC-A4BR-01A-32R-A32Y-07 TMPRSS2-ERG 9 19 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KC-A4BR-01A-32R-A32Y-07 SETD2-HIVEP3 2 3 chr3:47163854:- chr1:41918524:- . Likely Oncogenic NA TCGA-KC-A4BV-01A-31R-A26U-07 TMPRSS2-ERG 20 44 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KC-A4BV-01A-31R-A26U-07 AFF1-RBFOX1 6 22 chr4:87047594:+ chr16:7052057:+ INFRAME NA TCGA-KC-A4BV-01A-31R-A26U-07 SEPT9-CRAT 3 15 chr17:77307197:+ chr9:129104306:- FRAMESHIFT NA TCGA-KC-A4BV-01A-31R-A26U-07 BACE2-TMPRSS2 5 6 chr21:41257326:+ chr21:41476620:- FRAMESHIFT Likely Oncogenic NA TCGA-KC-A4BV-01A-31R-A26U-07 RSRP1-CAPZA1 1 4 chr1:25337040:- chr1:112647210:+ . NA TCGA-KC-A7F3-01A-21R-A33R-07 CRIM1-VIT 2 14 chr2:36356623:+ chr2:36754921:+ INFRAME NA TCGA-KC-A7F3-01A-21R-A33R-07 ISOC1-CCDC192 3 9 chr5:129107062:+ chr5:127941182:+ FRAMESHIFT NA TCGA-KC-A7F3-01A-21R-A33R-07 ZC3H15-CPS1 2 6 chr2:186486457:+ chr2:210590106:+ INFRAME NA TCGA-KC-A7F6-01A-11R-A33R-07 TMPRSS2-ERG 38 27 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KC-A7F6-01A-11R-A33R-07 CBX5-HNRNPA1 11 53 chr12:54280008:- chr12:54286662:+ . NA TCGA-KC-A7F6-01A-11R-A33R-07 ADNP-SCCPDH 13 38 chr20:50902017:- chr1:246735975:+ INFRAME NA TCGA-KC-A7F6-01A-11R-A33R-07 TOM1L2-PECAM1 5 10 chr17:17972262:- chr17:64378117:- INFRAME NA TCGA-KC-A7F6-01A-11R-A33R-07 CDK12-APRT 3 6 chr17:39557058:+ chr16:88810148:- . Likely Oncogenic NA TCGA-KC-A7F6-01A-11R-A33R-07 IQSEC1-SCCPDH 2 7 chr3:12911629:- chr1:246740172:+ FRAMESHIFT NA TCGA-KC-A7F6-01A-11R-A33R-07 ARHGAP21-PDCD11 1 6 chr10:24721837:- chr10:103424984:+ INFRAME NA TCGA-KC-A7FA-01A-21R-A33R-07 NPAS2-GNLY 6 7 chr2:100949480:+ chr2:85695320:+ INFRAME NA TCGA-KC-A7FA-01A-21R-A33R-07 ATG4C-AKAIN1 2 3 chr1:62784225:+ chr18:5145755:- . NA TCGA-KC-A7FA-01A-21R-A33R-07 FAM35A-DOCK1 1 3 chr10:87170974:+ chr10:127403055:+ FRAMESHIFT NA TCGA-KC-A7FD-01A-11R-A33R-07 TMPRSS2-ETV4 160 557 chr21:41508081:- chr17:43545367:- . Likely Oncogenic NA TCGA-KC-A7FD-01A-11R-A33R-07 FXR2-TARBP1 7 8 chr17:7605645:- chr1:234430301:- INFRAME NA TCGA-KC-A7FD-01A-11R-A33R-07 MRPL39-SLC35G6 3 3 chr21:25599799:- chr17:7481988:+ INFRAME NA TCGA-KC-A7FD-01A-11R-A33R-07 RNF170-CSMD1 1 9 chr8:42887728:- chr8:3616797:- FRAMESHIFT NA TCGA-KK-A59V-01A-11R-A29R-07 MTERF4-SPAG16 1 6 chr2:241089188:- chr2:213364076:+ . NA TCGA-KK-A59X-01A-11R-A29R-07 NCKAP5-MZT2A 2 31 chr2:133303037:- chr2:131484218:- FRAMESHIFT NA TCGA-KK-A59X-01A-11R-A29R-07 EPHA6-CNTN6 4 14 chr3:96866889:+ chr3:1401433:+ FRAMESHIFT NA TCGA-KK-A59X-01A-11R-A29R-07 DLG1-CRYBG3 4 13 chr3:197194425:- chr3:97912167:+ INFRAME NA TCGA-KK-A59X-01A-11R-A29R-07 UBR2-XPO5 1 24 chr6:42683111:+ chr6:43534007:- INFRAME NA TCGA-KK-A59X-01A-11R-A29R-07 THSD7B-DARS 4 4 chr2:136765687:+ chr2:135983454:- . NA TCGA-KK-A59X-01A-11R-A29R-07 PCYT1A-EPHA6 2 6 chr3:196287532:- chr3:97405150:+ . NA TCGA-KK-A59X-01A-11R-A29R-07 ARGLU1-CXCR4 1 4 chr13:106567573:- chr2:136115912:- FRAMESHIFT NA TCGA-KK-A59Y-01A-11R-A26U-07 TMPRSS2-TMEFF2 22 70 chr21:41480476:- chr2:191999208:- INFRAME Likely Oncogenic NA TCGA-KK-A59Y-01A-11R-A26U-07 TMPRSS2-ERG 11 23 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A59Y-01A-11R-A26U-07 NAALADL2-CCDC39 4 5 chr3:174441032:+ chr3:180679799:- . NA TCGA-KK-A59Y-01A-11R-A26U-07 PLPP1-DIAPH1 3 5 chr5:55534572:- chr5:141587197:- FRAMESHIFT NA TCGA-KK-A59Y-01A-11R-A26U-07 SCFD1-GPHN 1 4 chr14:30673347:+ chr14:66681107:+ FRAMESHIFT NA TCGA-KK-A59Y-01A-11R-A26U-07 TMEFF2-TMPRSS2 1 2 chr2:192184354:- chr21:41479282:- FRAMESHIFT Likely Oncogenic NA TCGA-KK-A59Z-01A-12R-A26U-07 KANTR-PAGE5 19 35 chrX:53094284:+ chrX:55221375:+ . NA TCGA-KK-A6DY-01A-12R-A311-07 TMPRSS2-ERG 27 295 chr21:41488394:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-KK-A6DY-01A-12R-A311-07 EIF4G1-PTH2R 3 24 chr3:184328990:+ chr2:208824195:+ . NA TCGA-KK-A6DY-01A-12R-A311-07 CARM1-CASP14 1 3 chr19:10916497:+ chr19:15052206:+ . NA TCGA-KK-A6E0-01A-11R-A311-07 ANKRD29-KC6 4 23 chr18:23629853:- chr18:41467780:- . NA TCGA-KK-A6E0-01A-11R-A311-07 ARHGAP24-MAPK10 1 3 chr4:85778965:+ chr4:86194407:- . NA TCGA-KK-A6E0-01A-11R-A311-07 SMYD2-MGST2 1 2 chr1:214281427:+ chr4:139695197:+ INFRAME NA TCGA-KK-A6E1-01A-11R-A311-07 ARF1-HSPA9 93 172 chr1:228082765:+ chr5:138569049:- . NA TCGA-KK-A6E1-01A-11R-A311-07 RYK-KALRN 63 276 chr3:134188837:- chr3:124430656:+ FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 TMPRSS2-ERG 55 146 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A6E1-01A-11R-A311-07 PLA2G16-SNHG1 15 115 chr11:63598061:- chr11:62853833:- . NA TCGA-KK-A6E1-01A-11R-A311-07 ERG-KCNJ6 15 42 chr21:38575662:- chr21:37625484:- FRAMESHIFT Likely Oncogenic NA TCGA-KK-A6E1-01A-11R-A311-07 TBC1D25-HSPA9 6 70 chrX:48545023:+ chr5:138561789:- FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 SRRM1-FAU 11 38 chr1:24647802:+ chr11:65120774:- . NA TCGA-KK-A6E1-01A-11R-A311-07 PTBP1-UBE3C 2 65 chr19:804438:+ chr7:157216867:+ INFRAME NA TCGA-KK-A6E1-01A-11R-A311-07 FAU-SRRM1 3 45 chr11:65120722:- chr1:24647591:+ . NA TCGA-KK-A6E1-01A-11R-A311-07 EVA1C-CBR3 6 26 chr21:32453508:+ chr21:36146076:+ FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 TOX3-C16orf97 4 9 chr16:52546637:- chr16:52058428:- . NA TCGA-KK-A6E1-01A-11R-A311-07 PDE4D-PCCB 1 20 chr5:59988488:- chr3:136255856:+ FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 TTLL7-SAMD13 4 8 chr1:83904079:- chr1:84325637:+ FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 ARMC8-IFT57 1 9 chr3:138274544:+ chr3:108191643:- INFRAME NA TCGA-KK-A6E1-01A-11R-A311-07 ETS2-WRB 2 5 chr21:38806120:+ chr21:39393166:+ . NA TCGA-KK-A6E1-01A-11R-A311-07 U2SURP-PARP9 2 5 chr3:143038960:+ chr3:122537073:- FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 MNAT1-RASGEF1B 1 5 chr14:60734951:+ chr4:81459514:- FRAMESHIFT NA TCGA-KK-A6E1-01A-11R-A311-07 PLXNA1-DZIP1L 1 2 chr3:126989787:+ chr3:138092544:- INFRAME NA TCGA-KK-A6E2-01A-11R-A311-07 TMPRSS2-ERG 65 349 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A6E2-01A-11R-A311-07 MOB1A-DUSP11 10 64 chr2:74178661:- chr2:73778376:- INFRAME NA TCGA-KK-A6E2-01A-11R-A311-07 THRA-CDC6 3 2 chr17:40063092:+ chr17:40300828:+ . NA TCGA-KK-A6E2-01A-11R-A311-07 WASL-FEZF1 1 9 chr7:123748618:- chr7:122304511:- . NA TCGA-KK-A6E2-01A-11R-A311-07 CDH3-SNTB2 1 4 chr16:68645750:+ chr16:69299590:+ INFRAME NA TCGA-KK-A6E3-01A-21R-A30B-07 RERE-EXOSC7 2 3 chr1:8655973:- chr3:44989140:+ FRAMESHIFT NA TCGA-KK-A6E4-01A-11R-A30B-07 TMPRSS2-ERG 14 15 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A6E4-01A-11R-A30B-07 GPHN-RAD51B 3 4 chr14:66776521:+ chr14:67835080:+ INFRAME NA TCGA-KK-A6E5-01A-11R-A311-07 RYK-KALRN 1 1 chr3:134188837:- chr3:124430656:+ FRAMESHIFT NA TCGA-KK-A6E6-01A-11R-A311-07 TMPRSS2-ERG 24 33 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A6E6-01A-11R-A311-07 PDIA4-HACE1 2 19 chr7:149028321:- chr6:104784485:- FRAMESHIFT NA TCGA-KK-A6E6-01A-11R-A311-07 ROCK1-RBM47 2 10 chr18:21070532:- chr4:40544506:- . NA TCGA-KK-A6E6-01A-11R-A311-07 ERG-SRPK2 3 4 chr21:38575662:- chr7:105399253:- . Likely Oncogenic NA TCGA-KK-A7AP-01A-12R-A33R-07 SLC45A3-ETV1 191 828 chr1:205680394:- chr7:13939246:- . Likely Oncogenic NA TCGA-KK-A7AP-01A-12R-A33R-07 TIA1-ACTR2 19 44 chr2:70236079:- chr2:65251027:+ INFRAME NA TCGA-KK-A7AP-01A-12R-A33R-07 C2orf42-ACTR2 7 10 chr2:70236079:- chr2:65251027:+ . NA TCGA-KK-A7AP-01A-12R-A33R-07 PHLDB1-RNF121 1 18 chr11:118613450:+ chr11:71960750:+ . NA TCGA-KK-A7AP-01A-12R-A33R-07 RASGRF1-HOMER2 2 9 chr15:79090223:- chr15:82892841:- FRAMESHIFT NA TCGA-KK-A7AP-01A-12R-A33R-07 COX7A2-USP18 1 1 chr6:75243717:- chr22:18176772:+ FRAMESHIFT NA TCGA-KK-A7AQ-01A-11R-A33R-07 KDM4C-PTPRD 2 4 chr9:6990524:+ chr9:10341017:- . Likely Oncogenic NA TCGA-KK-A7AQ-01A-11R-A33R-07 KANSL1L-RAPGEF4 1 3 chr2:210171149:- chr2:172917802:+ . NA TCGA-KK-A7AU-01A-11R-A32O-07 TMPRSS2-ERG 48 33 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A7AU-01A-11R-A32O-07 DSTN-DTD1 2 36 chr20:17570211:+ chr20:18744100:+ INFRAME NA TCGA-KK-A7AU-01A-11R-A32O-07 BMS1-PHYHIPL 6 12 chr10:42802218:+ chr10:59236483:+ FRAMESHIFT NA TCGA-KK-A7AU-01A-11R-A32O-07 SCARB1-SUB1 1 31 chr12:124863595:- chr5:32598961:+ INFRAME NA TCGA-KK-A7AU-01A-11R-A32O-07 GBAS-PHYHIPL 1 4 chr7:55964701:+ chr10:59238588:+ FRAMESHIFT NA TCGA-KK-A7AU-01A-11R-A32O-07 TASP1-MACROD2 1 4 chr20:13580897:- chr20:14684843:+ FRAMESHIFT NA TCGA-KK-A7AV-01A-11R-A32O-07 GSR-STMN2 4 6 chr8:30700081:- chr8:79636802:+ FRAMESHIFT NA TCGA-KK-A7AV-01A-11R-A32O-07 TMEM39A-MAATS1 1 5 chr3:119452447:- chr3:119715562:+ FRAMESHIFT NA TCGA-KK-A7AW-01A-11R-A32O-07 TMPRSS2-ETV4 8 14 chr21:41508081:- chr17:43545367:- . Likely Oncogenic NA TCGA-KK-A7AW-01A-11R-A32O-07 TTC39A-MRPL37 7 9 chr1:51305977:- chr1:54216141:+ INFRAME NA TCGA-KK-A7AW-01A-11R-A32O-07 KAT6A-TRAPPC9 3 5 chr8:42048378:- chr8:140024079:- INFRAME NA TCGA-KK-A7AW-01A-11R-A32O-07 PRKD3-CEBPZ 1 4 chr2:37324681:- chr2:37203008:- . NA TCGA-KK-A7AZ-01A-12R-A32O-07 PVT1-EIF3E 237 1689 chr8:127794734:+ chr8:108203503:- . NA TCGA-KK-A7AZ-01A-12R-A32O-07 TMPRSS2-ETV5 58 170 chr21:41489507:- chr3:186105942:- . Likely Oncogenic NA TCGA-KK-A7AZ-01A-12R-A32O-07 TMPRSS2-DGKG 58 160 chr21:41489507:- chr3:186105942:- . Likely Oncogenic NA TCGA-KK-A7AZ-01A-12R-A32O-07 MIR1204-EIF3E 27 116 chr8:127796008:+ chr8:108203503:- . NA TCGA-KK-A7AZ-01A-12R-A32O-07 TRPM8-SLC4A4 13 22 chr2:233996516:+ chr4:71440616:+ FRAMESHIFT NA TCGA-KK-A7AZ-01A-12R-A32O-07 AUNIP-TRPM8 9 9 chr1:25859280:- chr2:233996326:+ FRAMESHIFT NA TCGA-KK-A7AZ-01A-12R-A32O-07 SLC4A4-AUNIP 2 12 chr4:71397653:+ chr1:25835846:- FRAMESHIFT NA TCGA-KK-A7B0-01A-11R-A32O-07 RFLNA-EIF2S2 4 5 chr12:123974020:+ chr20:34105545:- . NA TCGA-KK-A7B0-01A-11R-A32O-07 ZNF664-EIF2S2 4 5 chr12:123974020:+ chr20:34105545:- . NA TCGA-KK-A7B1-01A-11R-A32O-07 TMPRSS2-ERG 54 151 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A7B1-01A-11R-A32O-07 PIAS1-HMCN2 13 57 chr15:68086750:+ chr9:130422577:+ INFRAME NA TCGA-KK-A7B1-01A-11R-A32O-07 RNF38-LMOD2 3 31 chr9:36400554:- chr7:123661860:+ . NA TCGA-KK-A7B1-01A-11R-A32O-07 GPD1L-CNOT10 5 14 chr3:32146734:+ chr3:32708670:+ INFRAME NA TCGA-KK-A7B1-01A-11R-A32O-07 GLB1-PSD2 3 17 chr3:33053491:- chr5:139835723:+ INFRAME NA TCGA-KK-A7B1-01A-11R-A32O-07 LMCD1-ZNF589 5 8 chr3:8501980:+ chr3:48260813:+ INFRAME NA TCGA-KK-A7B1-01A-11R-A32O-07 PDZRN3-THRB 4 8 chr3:73602354:- chr3:24337371:- . NA TCGA-KK-A7B1-01A-11R-A32O-07 MED15-GPATCH2L 2 6 chr22:20507746:+ chr14:76171843:+ FRAMESHIFT NA TCGA-KK-A7B2-01A-12R-A32O-07 TMPRSS2-ERG 12 63 chr21:41494356:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-KK-A7B2-01A-12R-A32O-07 ASXL2-POMC 1 3 chr2:25799385:- chr2:25164792:- . Likely Oncogenic NA TCGA-KK-A7B2-01A-12R-A32O-07 MDM2-BRI3BP 1000 1000 chr12:68820374:+ chr12:125025344:+ FRAMESHIFT NA TCGA-KK-A7B3-01A-11R-A33R-07 RRAS2-FHIT 19 157 chr11:14358763:- chr3:59922414:- INFRAME NA TCGA-KK-A7B3-01A-11R-A33R-07 PLEKHA8-OSBPL3 2 4 chr7:30060942:+ chr7:24809951:- INFRAME NA TCGA-KK-A7B4-01A-11R-A32O-07 TMPRSS2-ERG 92 77 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A7B4-01A-11R-A32O-07 FOXA1-AIMP1 20 52 chr14:37591400:- chr4:106336869:+ FRAMESHIFT NA TCGA-KK-A7B4-01A-11R-A32O-07 CLASRP-EXOC3L2 5 110 chr19:45053177:+ chr19:45234826:- INFRAME NA TCGA-KK-A7B4-01A-11R-A32O-07 NRF1-MLXIPL 10 73 chr7:129611824:+ chr7:73616177:- . NA TCGA-KK-A7B4-01A-11R-A32O-07 VPS13B-AKAP7 9 32 chr8:99136752:+ chr6:131281530:+ INFRAME NA TCGA-KK-A7B4-01A-11R-A32O-07 POLR2J3-LGALS4 4 19 chr7:102566997:- chr19:38806595:- FRAMESHIFT NA TCGA-KK-A7B4-01A-11R-A32O-07 ZRANB3-TMEM163 5 9 chr2:135531127:- chr2:134552091:- . NA TCGA-KK-A7B4-01A-11R-A32O-07 SNHG6-EPHX1 3 12 chr8:66925437:- chr1:225828725:+ . NA TCGA-KK-A7B4-01A-11R-A32O-07 GIGYF2-TMEM163 1 17 chr2:232703489:+ chr2:134552091:- . NA TCGA-KK-A8I4-01A-11R-A36G-07 RNF19A-FAM177A1 27 49 chr8:100309867:- chr14:35102681:+ . NA TCGA-KK-A8I4-01A-11R-A36G-07 TMPRSS2-ERG 21 19 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A8I4-01A-11R-A36G-07 PHF3-R3HCC1 6 58 chr6:63636150:+ chr8:23288506:+ . NA TCGA-KK-A8I4-01A-11R-A36G-07 TRAF3IP2-KIAA1324 2 8 chr6:111575643:- chr1:109185045:+ INFRAME NA TCGA-KK-A8I5-01A-11R-A36G-07 SLC45A3-ERG 21 133 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-KK-A8I5-01A-11R-A36G-07 CRYL1-GJB6 13 46 chr13:20489370:- chr13:20223495:- . NA TCGA-KK-A8I5-01A-11R-A36G-07 NOP14-CDK18 8 9 chr4:2963125:- chr1:205523147:+ . NA TCGA-KK-A8I5-01A-11R-A36G-07 SARAF-TNKS 3 3 chr8:30082847:- chr8:9679951:+ INFRAME NA TCGA-KK-A8I5-01A-11R-A36G-07 ARMC8-MRAS 1 7 chr3:138188530:+ chr3:138372866:+ . NA TCGA-KK-A8I6-01A-11R-A36G-07 NDRG1-ERG 49 145 chr8:133280235:- chr21:38445624:- . Likely Oncogenic NA TCGA-KK-A8I6-01A-11R-A36G-07 EDEM1-GPD1L 9 40 chr3:5188314:+ chr3:32128076:+ INFRAME NA TCGA-KK-A8I6-01A-11R-A36G-07 CCT3-RAB13 6 44 chr1:156333547:- chr1:153984781:- INFRAME NA TCGA-KK-A8I6-01A-11R-A36G-07 NSA2-FIS1 5 13 chr5:74774060:+ chr7:101240906:- INFRAME NA TCGA-KK-A8I6-01A-11R-A36G-07 RASEF-OSTF1 5 13 chr9:82990391:- chr9:75117504:+ FRAMESHIFT NA TCGA-KK-A8I6-01A-11R-A36G-07 KIF13B-PNOC 2 5 chr8:29165662:- chr8:28329135:+ . NA TCGA-KK-A8I6-01A-11R-A36G-07 SNAP91-SMPX 1 7 chr6:83593478:- chrX:21743836:- FRAMESHIFT NA TCGA-KK-A8I8-01A-11R-A36G-07 TMPRSS2-ERG 22 32 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A8I8-01A-11R-A36G-07 C12orf29-IRAK4 7 22 chr12:88035738:+ chr12:43768103:+ . NA TCGA-KK-A8I8-01A-11R-A36G-07 HNRNPU-SLC36A4 3 8 chr1:244858011:- chr11:93185814:- FRAMESHIFT NA TCGA-KK-A8I9-01A-11R-A36G-07 APBA1-RAD23B 5 5 chr9:69672153:- chr9:107306379:+ . NA TCGA-KK-A8IA-01A-11R-A36G-07 TMPRSS2-ERG 36 37 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A8IA-01A-11R-A36G-07 PHKA2-ADGRG2 17 34 chrX:18983855:- chrX:18999960:- FRAMESHIFT NA TCGA-KK-A8IA-01A-11R-A36G-07 HKR1-CHMP2A 3 6 chr19:37335257:+ chr19:58552185:- INFRAME NA TCGA-KK-A8IB-01A-11R-A36G-07 PRKDC-UBE2V2 3 9 chr8:47953620:- chr8:48043033:+ INFRAME NA TCGA-KK-A8IB-01A-11R-A36G-07 NSMAF-CLVS1 1 3 chr8:58594232:- chr8:61458307:+ FRAMESHIFT NA TCGA-KK-A8IC-01A-11R-A36G-07 GPATCH8-GRM7-AS2 53 100 chr17:44464472:- chr3:6894019:- . NA TCGA-KK-A8IC-01A-11R-A36G-07 TMPRSS2-ERG 45 102 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A8IC-01A-11R-A36G-07 TP53-FARP2 10 29 chr17:7687377:- chr2:241373084:+ . Likely Oncogenic NA TCGA-KK-A8IC-01A-11R-A36G-07 MBTD1-SYBU 4 16 chr17:51206888:- chr8:109619039:- INFRAME NA TCGA-KK-A8IC-01A-11R-A36G-07 MRC2-PHYHIPL 4 15 chr17:62627920:+ chr10:59245057:+ FRAMESHIFT NA TCGA-KK-A8IC-01A-11R-A36G-07 OGT-POLA1 3 5 chrX:71538072:+ chrX:24809898:+ INFRAME NA TCGA-KK-A8IC-01A-11R-A36G-07 LLGL2-CPNE4 1 12 chr17:75563463:+ chr3:132040321:- . NA TCGA-KK-A8IC-01A-11R-A36G-07 C19orf48-CCDC9 1 8 chr19:50802217:- chr19:47256523:+ . NA TCGA-KK-A8ID-01A-11R-A36G-07 SF3A2-AZU1 21 250 chr19:2243544:+ chr19:828230:+ FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 SDK1-CHST12 8 32 chr7:3821583:+ chr7:2432563:+ . NA TCGA-KK-A8ID-01A-11R-A36G-07 SUSD6-SMOC1 4 33 chr14:69658713:+ chr14:69864162:+ . NA TCGA-KK-A8ID-01A-11R-A36G-07 FAXC-ASCC3 6 13 chr6:99349107:- chr6:100540387:- FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 SLC7A1-RIDA 5 16 chr13:29530538:- chr8:98108751:- INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 SLC35C2-B4GALT5 8 3 chr20:46364371:- chr20:49656702:- . NA TCGA-KK-A8ID-01A-11R-A36G-07 FOXP4-DNAH8 7 4 chr6:41546867:+ chr6:38982346:+ . NA TCGA-KK-A8ID-01A-11R-A36G-07 TMC6-UACA 5 11 chr17:78122605:- chr15:70678206:- INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 RPTOR-IQCH 2 22 chr17:80855547:+ chr15:67400114:+ INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 RABEP1-MINK1 3 16 chr17:5378232:+ chr17:4878317:+ INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 TFCP2-RNF41 3 10 chr12:51172601:- chr12:56216613:- . NA TCGA-KK-A8ID-01A-11R-A36G-07 CRYL1-GJA3 2 11 chr13:20432102:- chr13:20143305:- . NA TCGA-KK-A8ID-01A-11R-A36G-07 CTDSPL2-CASC4 1 14 chr15:44427772:+ chr15:44289159:+ . NA TCGA-KK-A8ID-01A-11R-A36G-07 PDE9A-SLC37A1 3 6 chr21:42754064:+ chr21:42502296:+ . NA TCGA-KK-A8ID-01A-11R-A36G-07 PTK7-VEGFA 2 9 chr6:43076567:+ chr6:43774341:+ FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 RAB7A-EEFSEC 3 4 chr3:128798069:+ chr3:128408069:+ INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 VPS13B-RASL11A 2 8 chr8:99721047:+ chr13:27271484:+ FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 MRNIP-RNF130 2 7 chr5:179841907:- chr5:180013311:- FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 LIG1-C19orf48 1 10 chr19:48149763:- chr19:50802257:- . NA TCGA-KK-A8ID-01A-11R-A36G-07 BICD1-CCDC91 1 6 chr12:32107544:+ chr12:28450161:+ INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 IFT81-ACACB 1 5 chr12:110209216:+ chr12:109187999:+ INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 ZNF532-NEDD4L 1 5 chr18:58920633:+ chr18:58165788:+ INFRAME NA TCGA-KK-A8ID-01A-11R-A36G-07 RILPL1-NCOR2 1 3 chr12:123523495:- chr12:124437996:- FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 SPTBN4-SIPA1L3 1 2 chr19:40534343:+ chr19:38182519:+ FRAMESHIFT NA TCGA-KK-A8ID-01A-11R-A36G-07 FAM160B1-TECTB 1000 1000 chr10:114833461:+ chr10:112283735:+ . NA TCGA-KK-A8IF-01A-11R-A36G-07 GABRG3-NBPF22P 7 10 chr15:27480787:+ chr5:86282731:+ . NA TCGA-KK-A8IF-01A-11R-A36G-07 TPD52L1-SAMD3 2 13 chr6:125153970:+ chr6:130313093:- . NA TCGA-KK-A8IF-01A-11R-A36G-07 DDX10-OTUD4 1 6 chr11:108706837:+ chr4:145111128:- . NA TCGA-KK-A8IG-01A-11R-A36G-07 CHD9-CASC16 3 12 chr16:53288014:+ chr16:52591067:- . NA TCGA-KK-A8IH-01A-11R-A36G-07 TMPRSS2-ERG 35 210 chr21:41494356:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-KK-A8IH-01A-11R-A36G-07 XRCC5-ACADL 3 88 chr2:216194986:+ chr2:210195338:- INFRAME NA TCGA-KK-A8IH-01A-11R-A36G-07 CUEDC1-ROPN1B 5 5 chr17:57955225:- chr3:125977004:+ . NA TCGA-KK-A8IH-01A-11R-A36G-07 HYDIN-PSMD11 4 7 chr16:71018129:- chr17:32464049:+ FRAMESHIFT NA TCGA-KK-A8IH-01A-11R-A36G-07 CIC-CD177 3 9 chr19:42268594:+ chr19:43353853:+ . Likely Oncogenic NA TCGA-KK-A8IH-01A-11R-A36G-07 ANK3-USP9Y 3 4 chr10:60055658:- chrY:12856340:+ INFRAME NA TCGA-KK-A8IH-01A-11R-A36G-07 ADK-KCNMA1 1 6 chr10:74224591:+ chr10:77019099:- INFRAME NA TCGA-KK-A8IH-01A-11R-A36G-07 GSK3A-ZNF564 1 6 chr19:42239955:- chr19:12528696:- INFRAME NA TCGA-KK-A8II-01A-11R-A36G-07 TMPRSS2-ERG 62 90 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-KK-A8II-01A-11R-A36G-07 SPTBN1-ECI2 23 148 chr2:54599243:+ chr6:4133701:- INFRAME NA TCGA-KK-A8II-01A-11R-A36G-07 MAGI1-TBC1D30 3 20 chr3:66037996:- chr12:64827835:+ INFRAME NA TCGA-KK-A8II-01A-11R-A36G-07 ARHGAP32-CWF19L2 4 9 chr11:129062280:- chr11:107455776:- INFRAME NA TCGA-KK-A8II-01A-11R-A36G-07 COL6A3-DDX3X 5 5 chr2:237343576:- chrX:41349901:+ . NA TCGA-KK-A8II-01A-11R-A36G-07 USP34-CAPN13 1000 1000 chr2:61283244:- chr2:30754364:- FRAMESHIFT NA TCGA-KK-A8IJ-01A-11R-A352-07 PDS5B-CRYBB1 33 124 chr13:32586593:+ chr22:26616338:- . NA TCGA-KK-A8IJ-01A-11R-A352-07 RB1CC1-PTPN3 11 51 chr8:52668021:- chr9:109391561:- INFRAME NA TCGA-KK-A8IJ-01A-11R-A352-07 ZNF292-PRSS54 1 6 chr6:87155759:+ chr16:58284721:- INFRAME NA TCGA-KK-A8IJ-01A-11R-A352-07 WDFY3-FOSL1 1 2 chr4:84932270:- chr11:65897006:- . NA TCGA-KK-A8IL-01A-11R-A36G-07 SLC45A3-SKIL 5 68 chr1:205680394:- chr3:170359699:+ . NA TCGA-KK-A8IL-01A-11R-A36G-07 AKT3-PPP2R2A 3 23 chr1:243843125:- chr8:26354468:+ FRAMESHIFT Likely Oncogenic NA TCGA-KK-A8IL-01A-11R-A36G-07 NEDD4L-MORC3 5 7 chr18:58165861:+ chr21:36356620:+ INFRAME NA TCGA-KK-A8IL-01A-11R-A36G-07 MAP4K3-TMEM178A 2 8 chr2:39286852:- chr2:39707049:+ FRAMESHIFT NA TCGA-M7-A71Y-01A-22R-A32O-07 SLC45A3-ETV1 31 165 chr1:205680394:- chr7:13939246:- . Likely Oncogenic NA TCGA-M7-A71Y-01A-22R-A32O-07 GDAP2-SLAIN1 1 13 chr1:117929448:- chr13:77760828:+ . NA TCGA-M7-A71Y-01A-22R-A32O-07 ZNF704-TPD52 2 6 chr8:80821374:- chr8:80064593:- INFRAME NA TCGA-M7-A71Z-01A-12R-A32O-07 PLEKHJ1-TCF3 10 83 chr19:2235923:- chr19:1622415:- INFRAME NA TCGA-M7-A71Z-01A-12R-A32O-07 TMPRSS2-ERG 23 26 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-M7-A71Z-01A-12R-A32O-07 MIR6789-TCF3 10 17 chr19:2235923:- chr19:1622415:- . NA TCGA-M7-A71Z-01A-12R-A32O-07 RIOK3-ZNF521 4 7 chr18:23467526:+ chr18:25345347:- . NA TCGA-M7-A71Z-01A-12R-A32O-07 SCAF8-SAMD5 1 5 chr6:154778045:+ chr6:147564394:+ INFRAME NA TCGA-M7-A71Z-01A-12R-A32O-07 PLEKHJ1-TCF7L1 1000 1000 chr19:2235923:- chr19:1622415:- . NA TCGA-M7-A720-01A-12R-A32O-07 CREB1-SUCNR1 1 4 chr2:207561160:+ chr3:151879852:+ . NA TCGA-M7-A720-01A-12R-A32O-07 DDX23-NMNAT2 1 4 chr12:48852084:- chr1:183293793:- . NA TCGA-M7-A720-01A-12R-A32O-07 NRBP1-RPS16 1 1 chr2:27437360:+ chr19:39433761:- INFRAME NA TCGA-M7-A724-01A-12R-A32O-07 GULP1-TFPI 7 15 chr2:188529195:+ chr2:187529485:- . NA TCGA-M7-A724-01A-12R-A32O-07 FBXW7-SETD7 1 20 chr4:152534941:- chr4:139496521:- . Likely Oncogenic NA TCGA-M7-A724-01A-12R-A32O-07 NFATC3-SPATA33 4 7 chr16:68191775:+ chr16:89669286:+ INFRAME NA TCGA-M7-A724-01A-12R-A32O-07 SLC15A4-TMEM132D 3 5 chr12:128814775:- chr12:129700698:- FRAMESHIFT NA TCGA-M7-A724-01A-12R-A32O-07 FBXL5-RAB28 1000 1000 chr4:15655204:- chr4:13479526:- INFRAME NA TCGA-M7-A725-01A-12R-A32O-07 TMPRSS2-ETV4 193 298 chr21:41508081:- chr17:43545367:- . Likely Oncogenic NA TCGA-M7-A725-01A-12R-A32O-07 KIAA1671-MYO18B 36 93 chr22:25112462:+ chr22:25921257:+ INFRAME NA TCGA-M7-A725-01A-12R-A32O-07 ZFHX3-ZNF821 13 73 chr16:72889731:- chr16:71868037:- INFRAME NA TCGA-M7-A725-01A-12R-A32O-07 C21orf2-UMODL1 6 80 chr21:44339118:- chr21:42142096:+ . NA TCGA-M7-A725-01A-12R-A32O-07 BBS4-CSNK1G1 8 69 chr15:72735966:+ chr15:64180454:- INFRAME NA TCGA-M7-A725-01A-12R-A32O-07 SLC4A4-ARHGAP6 9 20 chr4:71397653:+ chrX:11254707:- INFRAME NA TCGA-M7-A725-01A-12R-A32O-07 RNF170-CRYBB1 2 29 chr8:42873931:- chr22:26616338:- . NA TCGA-M7-A725-01A-12R-A32O-07 TBCK-WDHD1 4 3 chr4:106171095:- chr14:54967394:- FRAMESHIFT NA TCGA-M7-A725-01A-12R-A32O-07 TYW1B-BAZ1B 1 12 chr7:72694687:- chr7:73478569:- INFRAME NA TCGA-M7-A725-01A-12R-A32O-07 CAPNS1-UPK1A 1 10 chr19:36146312:+ chr19:35677812:+ FRAMESHIFT NA TCGA-M7-A725-01A-12R-A32O-07 TCF12-DSCAM 2 4 chr15:57091891:+ chr21:40369245:- INFRAME NA TCGA-MG-AAMC-01A-11R-A41O-07 TMPRSS2-ERG 78 60 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-MG-AAMC-01A-11R-A41O-07 RBM5-CYB561D2 13 26 chr3:50105709:+ chr3:50353241:+ INFRAME NA TCGA-MG-AAMC-01A-11R-A41O-07 PSD3-NEFL 9 13 chr8:19013563:- chr8:24954305:- INFRAME NA TCGA-QU-A6IN-01A-11R-A31N-07 SLC20A2-FAAHP1 20 72 chr8:42436989:- chr1:46482210:+ . NA TCGA-QU-A6IN-01A-11R-A31N-07 TMPRSS2-ERG 9 14 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-QU-A6IP-01A-11R-A31N-07 TMPRSS2-ERG 6 15 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-SU-A7E7-01A-22R-A33R-07 BMPR1B-ETV1 16 34 chr4:94758068:+ chr7:13989139:- . Likely Oncogenic NA TCGA-SU-A7E7-01A-22R-A33R-07 NBPF26-RASSF5 7 14 chr1:120724250:+ chr1:206538172:+ INFRAME NA TCGA-TK-A8OK-01A-22R-A36G-07 FASN-NUCKS1 7 29 chr17:82080931:- chr1:205718005:- . NA TCGA-TK-A8OK-01A-22R-A36G-07 AFF4-SNTG2 7 23 chr5:132892164:- chr2:1209103:+ INFRAME NA TCGA-TK-A8OK-01A-22R-A36G-07 DHX9-PRELID1 2 42 chr1:182881647:+ chr5:177306422:+ INFRAME NA TCGA-TK-A8OK-01A-22R-A36G-07 NPTXR-GTPBP1 3 6 chr22:38823083:- chr22:38708845:+ INFRAME NA TCGA-TK-A8OK-01A-22R-A36G-07 GPATCH8-COMTD1 1 11 chr17:44503326:- chr10:75234743:- FRAMESHIFT NA TCGA-TP-A8TT-01A-12R-A41O-07 CASP7-LRRC27 20 36 chr10:113679978:+ chr10:132351607:+ INFRAME NA TCGA-TP-A8TT-01A-12R-A41O-07 TMPRSS2-ERG 11 56 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-TP-A8TT-01A-12R-A41O-07 CCSER1-WDFY3 3 8 chr4:90127831:+ chr4:84775138:- . NA TCGA-TP-A8TT-01A-12R-A41O-07 DOCK1-GANC 1 11 chr10:127127764:+ chr15:42329306:+ INFRAME NA TCGA-TP-A8TT-01A-12R-A41O-07 MSI2-SMYD3 1 5 chr17:57529724:+ chr1:246355094:- FRAMESHIFT NA TCGA-TP-A8TT-01A-12R-A41O-07 SNHG14-FUNDC1 1 5 chr15:25267044:+ chrX:44527365:- . NA TCGA-TP-A8TT-01A-12R-A41O-07 SMIM13-TM6SF1 1 4 chr6:11094389:+ chr15:83112797:+ FRAMESHIFT NA TCGA-TP-A8TV-01A-11R-A41O-07 COA1-AMPH 10 36 chr7:43729429:- chr7:38535011:- . NA TCGA-TP-A8TV-01A-11R-A41O-07 PPM1B-MTA3 5 8 chr2:44169274:+ chr2:42753374:+ . NA TCGA-TP-A8TV-01A-11R-A41O-07 POU2F1-FMO1 1 4 chr1:167383951:+ chr1:171258082:+ . NA TCGA-TP-A8TV-01A-11R-A41O-07 IMPA1-RSPO2 1 3 chr8:81686252:- chr8:108082807:- . NA TCGA-V1-A8MF-01A-11R-A36G-07 SLCO5A1-CASC9 3 8 chr8:69738040:- chr8:75224358:- . NA TCGA-V1-A8MF-01A-11R-A36G-07 NCAPG2-ERGIC1 1 4 chr7:158692842:- chr5:172935188:+ FRAMESHIFT NA TCGA-V1-A8MF-01A-11R-A36G-07 RALGAPA1-FOXA1 1 2 chr14:35808730:- chr14:37592711:- FRAMESHIFT NA TCGA-V1-A8MG-01A-11R-A36G-07 DDX39B-PPP1R18 11 36 chr6:31538763:- chr6:30679389:- INFRAME NA TCGA-V1-A8MG-01A-11R-A36G-07 KCTD20-STK38 4 8 chr6:36470257:+ chr6:36525642:- FRAMESHIFT NA TCGA-V1-A8MG-01A-11R-A36G-07 FOXN3-KCNQ1 1 8 chr14:89280950:- chr11:2768844:+ FRAMESHIFT NA TCGA-V1-A8MJ-01A-11R-A36G-07 PLPP1-SMN1 16 6 chr5:55534572:- chr5:70951941:+ FRAMESHIFT NA TCGA-V1-A8MJ-01A-11R-A36G-07 MAP4K3-SRGAP2 2 5 chr2:39436892:- chr1:206384014:+ INFRAME NA TCGA-V1-A8MJ-01A-11R-A36G-07 SLC45A3-ERG 1 1 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-V1-A8ML-01A-11R-A37L-07 ACACA-MMP28 4 23 chr17:37097830:- chr17:35779323:- INFRAME NA TCGA-V1-A8ML-01A-11R-A37L-07 NCOA4-ARHGAP44 1 13 chr10:46030526:- chr17:12958717:+ . NA TCGA-V1-A8ML-01A-11R-A37L-07 ARHGAP44-C17orf78 1 11 chr17:12958897:+ chr17:37389246:+ FRAMESHIFT NA TCGA-V1-A8ML-01A-11R-A37L-07 USP22-RNF167 1 6 chr17:21042665:- chr17:4944558:+ FRAMESHIFT NA TCGA-V1-A8MM-01A-11R-A37L-07 NEDD4L-DCLK2 1 6 chr18:58373269:+ chr4:150102478:+ FRAMESHIFT NA TCGA-V1-A8WL-01A-11R-A37L-07 PIEZO1-MNS1 18 24 chr16:88784901:- chr15:56464247:- FRAMESHIFT NA TCGA-V1-A8WL-01A-11R-A37L-07 FBXO34-ATG7 10 10 chr14:55271537:+ chr3:11554811:+ . NA TCGA-V1-A8WL-01A-11R-A37L-07 RASSF3-GYS2 1 7 chr12:64610743:+ chr12:21576057:- INFRAME NA TCGA-V1-A8WN-01A-11R-A37L-07 C1orf132-TSC22D3 80 177 chr1:207815929:- chrX:107715950:- . NA TCGA-V1-A8WN-01A-11R-A37L-07 SERF2-GPN2 2 27 chr15:43799107:+ chr1:26884290:- . NA TCGA-V1-A8WN-01A-11R-A37L-07 MMP11-GAS2L1 2 6 chr22:23772978:+ chr22:29310439:+ INFRAME NA TCGA-V1-A8WS-01A-11R-A37L-07 TMPRSS2-ERG 33 207 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-V1-A8WS-01A-11R-A37L-07 CHTF8-TBC1D22A 35 46 chr16:69132089:- chr22:47173498:+ . NA TCGA-V1-A8WS-01A-11R-A37L-07 TMPRSS2-INPP4B 29 54 chr21:41508081:- chr4:142270774:- . Likely Oncogenic NA TCGA-V1-A8WS-01A-11R-A37L-07 UBE2D3-GSTCD 22 79 chr4:102826485:- chr4:105822954:+ FRAMESHIFT NA TCGA-V1-A8WS-01A-11R-A37L-07 HERC2-TMEM145 12 12 chr15:28299402:- chr19:42314272:+ FRAMESHIFT NA TCGA-V1-A8WS-01A-11R-A37L-07 ELP5-ZNF614 4 38 chr17:7257038:+ chr19:52013246:- FRAMESHIFT NA TCGA-V1-A8WS-01A-11R-A37L-07 ERG-TMPRSS2 5 6 chr21:38575662:- chr21:41480602:- FRAMESHIFT Oncogenic NA TCGA-V1-A8WS-01A-11R-A37L-07 DYM-KATNAL2 2 10 chr18:49363161:- chr18:47052880:+ INFRAME NA TCGA-V1-A8WS-01A-11R-A37L-07 BORCS5-HDAC7 1 12 chr12:12357509:+ chr12:47792004:- INFRAME NA TCGA-V1-A8WS-01A-11R-A37L-07 TCF12-TTC23 3 4 chr15:56921098:+ chr15:99221864:- FRAMESHIFT NA TCGA-V1-A8WS-01A-11R-A37L-07 ECI1-CDKN3 3 3 chr16:2251316:- chr14:54401524:+ FRAMESHIFT NA TCGA-V1-A8WS-01A-11R-A37L-07 ZNRF3-DCAF11 1 7 chr22:28884066:+ chr14:24117266:+ INFRAME NA TCGA-V1-A8WS-01A-11R-A37L-07 ACTR3-ZRANB3 1 6 chr2:113942359:+ chr2:135230927:- INFRAME NA TCGA-V1-A8WV-01A-11R-A37L-07 EIF2AK1-MAP2K5 8 21 chr7:6037424:- chr15:67806646:+ INFRAME NA TCGA-V1-A8WV-01A-11R-A37L-07 BEND7-FRMD4A 5 5 chr10:13499739:- chr10:13858912:- FRAMESHIFT NA TCGA-V1-A8WV-01A-11R-A37L-07 FBXL3-MYCBP2 2 16 chr13:77015409:- chr13:77051162:- FRAMESHIFT NA TCGA-V1-A8WV-01A-11R-A37L-07 HDAC10-MORN5 1 7 chr22:50246679:- chr9:122199885:+ FRAMESHIFT NA TCGA-V1-A8WV-01A-11R-A37L-07 MAPK12-MORN5 1 7 chr22:50246679:- chr9:122199885:+ . NA TCGA-V1-A8WW-01A-11R-A37L-07 NDRG1-ERG 50 160 chr8:133280231:- chr21:38445620:- . Likely Oncogenic NA TCGA-V1-A8WW-01A-11R-A37L-07 POLR2L-TSPAN4 1 6 chr11:842414:- chr11:847201:+ . NA TCGA-V1-A8X3-01A-11R-A37L-07 SRRM2-SNRPE 10 39 chr16:2760499:+ chr1:203869877:+ FRAMESHIFT NA TCGA-V1-A8X3-01A-11R-A37L-07 SPATS2-PPM1H 3 7 chr12:49461037:+ chr12:62832279:- FRAMESHIFT NA TCGA-V1-A9O5-01A-11R-A41O-07 KIAA2022-PBDC1 4 12 chrX:74924883:- chrX:76172950:+ . NA TCGA-V1-A9O5-01A-11R-A41O-07 CEP70-TNFSF10 2 11 chr3:138498031:- chr3:172509321:- INFRAME NA TCGA-V1-A9O9-01A-11R-A41O-07 TMPRSS2-ERG 136 454 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-V1-A9O9-01A-11R-A41O-07 ACPP-ATP2C1 69 338 chr3:132317576:+ chr3:130930416:+ INFRAME NA TCGA-V1-A9O9-01A-11R-A41O-07 SLC30A4-VPS53 29 121 chr15:45521964:- chr17:661895:- FRAMESHIFT NA TCGA-V1-A9O9-01A-11R-A41O-07 TMTC3-ACSS3 16 37 chr12:88142487:+ chr12:81253307:+ . NA TCGA-V1-A9O9-01A-11R-A41O-07 NSFP1-NMT1 14 3 chr17:46372866:+ chr17:45099405:+ . NA TCGA-V1-A9O9-01A-11R-A41O-07 KIF13B-CSGALNACT1 7 23 chr8:29108139:- chr8:19408694:- INFRAME NA TCGA-V1-A9O9-01A-11R-A41O-07 BLOC1S6-SCMH1 6 22 chr15:45592276:+ chr1:41048890:- INFRAME NA TCGA-V1-A9O9-01A-11R-A41O-07 HMGN2P46-EBNA1BP2 3 33 chr15:45536209:+ chr1:43175045:- . NA TCGA-V1-A9O9-01A-11R-A41O-07 SCAF8-GREB1 8 9 chr6:154827240:+ chr2:11629948:+ FRAMESHIFT NA TCGA-V1-A9O9-01A-11R-A41O-07 SCMH1-SQRDL 4 20 chr1:41070595:- chr15:45658907:+ . NA TCGA-V1-A9O9-01A-11R-A41O-07 DOT1L-LSM7 3 15 chr19:2180756:+ chr19:2328477:- FRAMESHIFT NA TCGA-V1-A9O9-01A-11R-A41O-07 ATP2C1-CPNE4 2 12 chr3:130956179:+ chr3:132040321:- . NA TCGA-V1-A9O9-01A-11R-A41O-07 HMGN2P46-VPS53 2 9 chr15:45512449:+ chr17:661895:- . NA TCGA-V1-A9O9-01A-11R-A41O-07 XPO5-KIF6 1 7 chr6:43573480:- chr6:39346526:- INFRAME NA TCGA-V1-A9O9-01A-11R-A41O-07 DAGLA-INCENP 1 3 chr11:61723572:+ chr11:62150057:+ FRAMESHIFT NA TCGA-V1-A9OA-01A-11R-A41O-07 RNF121-VASP 1 15 chr11:71957264:+ chr19:45517663:+ INFRAME NA TCGA-V1-A9OL-01A-11R-A41O-07 HTT-WDR19 29 85 chr4:3189093:+ chr4:39255848:+ INFRAME NA TCGA-V1-A9OL-01A-11R-A41O-07 FAM110B-PREX2 15 34 chr8:57994806:+ chr8:68191722:+ . NA TCGA-V1-A9OL-01A-11R-A41O-07 PREX2-FAM110B 9 35 chr8:68192525:+ chr8:58189318:+ . NA TCGA-V1-A9OL-01A-11R-A41O-07 DCP1A-HYAL3 7 15 chr3:53285476:- chr3:50295362:- . NA TCGA-V1-A9OL-01A-11R-A41O-07 NEMP1-SMARCC2 2 30 chr12:57063119:- chr12:56174764:- INFRAME NA TCGA-V1-A9OL-01A-11R-A41O-07 DAB1-ITGB3BP 2 14 chr1:58506060:- chr1:63454968:- . NA TCGA-V1-A9OL-01A-11R-A41O-07 OMA1-ITGB3BP 2 14 chr1:58506060:- chr1:63454968:- FRAMESHIFT NA TCGA-V1-A9OL-01A-11R-A41O-07 ITGB3BP-TTC39A 2 8 chr1:63478764:- chr1:51294511:- INFRAME NA TCGA-V1-A9OT-01A-11R-A41O-07 MALAT1-SPZ1 3 41 chr11:65500814:+ chr5:80320137:+ . NA TCGA-V1-A9OT-01A-11R-A41O-07 GRHL2-ERG 1 6 chr8:101558812:+ chr21:38423561:- FRAMESHIFT Likely Oncogenic NA TCGA-V1-A9OT-01A-11R-A41O-07 DOCK6-SF3A1 1 2 chr19:11253639:- chr22:30346519:- FRAMESHIFT NA TCGA-V1-A9OY-01A-11R-A41O-07 TMPRSS2-ERG 8 14 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-V1-A9OY-01A-11R-A41O-07 GULP1-KCNJ13 2 5 chr2:188483492:+ chr2:232771378:- . NA TCGA-V1-A9Z7-01A-11R-A41O-07 RB1CC1-ST18 5 34 chr8:52714075:- chr8:52230077:- . NA TCGA-V1-A9Z7-01A-11R-A41O-07 DIAPH2-MAGEA11 1 5 chrX:96738762:+ chrX:149688838:+ . NA TCGA-V1-A9Z8-01A-11R-A41O-07 NUDT4-ATAD5 2 10 chr12:93381031:+ chr17:30860433:+ . NA TCGA-V1-A9Z8-01A-11R-A41O-07 GALNT3-TTC21B 2 5 chr2:165794015:- chr2:165901910:- . NA TCGA-V1-A9Z8-01A-11R-A41O-07 SH2D4A-AP3M2 2 3 chr8:19313823:+ chr8:42157941:+ FRAMESHIFT NA TCGA-V1-A9ZG-01A-11R-A41O-07 TMPRSS2-ERG 26 89 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-V1-A9ZG-01A-11R-A41O-07 SCP2-NCAM1 2 7 chr1:52927465:+ chr11:113255874:+ FRAMESHIFT NA TCGA-V1-A9ZI-01A-11R-A41O-07 TUBB3-TRPM5 3 15 chr16:89923458:+ chr11:2418591:- FRAMESHIFT NA TCGA-V1-A9ZI-01A-11R-A41O-07 NCOR1-TFDP2 4 2 chr17:16057514:- chr3:141974191:- INFRAME Likely Oncogenic NA TCGA-V1-A9ZK-01A-11R-A41O-07 CUL2-CYP2C18 5 13 chr10:35090430:- chr10:94687770:+ . NA TCGA-V1-A9ZK-01A-11R-A41O-07 FOXP2-ENKUR 2 7 chr7:114366640:+ chr10:24999546:- . NA TCGA-V1-A9ZK-01A-11R-A41O-07 RAP1GDS1-H2AFZ 2 1 chr4:98293515:+ chr4:99949740:- FRAMESHIFT NA TCGA-V1-A9ZR-01A-11R-A41O-07 GABARAP-NUP205 35 157 chr17:7240398:- chr7:135648325:+ . NA TCGA-V1-A9ZR-01A-11R-A41O-07 CLTC-ETV4 9 30 chr17:59666977:+ chr17:43536479:- INFRAME NA TCGA-V1-A9ZR-01A-11R-A41O-07 NUP205-DVL2 5 6 chr7:135646231:+ chr17:7230155:- FRAMESHIFT NA TCGA-V1-A9ZR-01A-11R-A41O-07 C16orf62-CDR2 5 5 chr16:19610415:+ chr16:22349849:- INFRAME NA TCGA-V1-A9ZR-01A-11R-A41O-07 PSME3-TM9SF2 1 16 chr17:42839380:+ chr13:99562691:+ FRAMESHIFT NA TCGA-V1-A9ZR-01A-11R-A41O-07 RNF4-RGS12 1 9 chr4:2500738:+ chr4:3378170:+ . NA TCGA-V1-A9ZR-01A-11R-A41O-07 ABCD4-ELMSAN1 2 4 chr14:74292551:- chr14:73722847:- FRAMESHIFT NA TCGA-V1-A9ZR-01A-11R-A41O-07 EP400-WHAMM 2 3 chr12:131994956:+ chr15:82819323:+ FRAMESHIFT NA TCGA-V1-A9ZR-01A-11R-A41O-07 CTNNA1-COTL1 1 5 chr5:138783372:+ chr16:84566955:- FRAMESHIFT NA TCGA-V1-A9ZR-01A-11R-A41O-07 NUP85-IL34 1 4 chr17:75226157:+ chr16:70646548:+ . NA TCGA-VN-A88K-01A-11R-A352-07 CDK7-RIN3 9 33 chr5:69235453:+ chr14:92641238:+ FRAMESHIFT NA TCGA-VN-A88K-01A-11R-A352-07 TMPRSS2-ERG 6 45 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-VN-A88K-01A-11R-A352-07 PLPP1-SREK1IP1 1 8 chr5:55534572:- chr5:64754362:- INFRAME NA TCGA-VN-A88L-01A-11R-A352-07 TMPRSS2-ERG 86 249 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-VN-A88L-01A-11R-A352-07 ERG-RPS18 21 60 chr21:38575662:- chr6:33272628:+ INFRAME Likely Oncogenic NA TCGA-VN-A88L-01A-11R-A352-07 DLD-SCEL 12 85 chr7:107891289:+ chr13:77597545:+ FRAMESHIFT NA TCGA-VN-A88L-01A-11R-A352-07 KIF5B-HHAT 4 32 chr10:32048464:- chr1:210464505:+ INFRAME NA TCGA-VN-A88L-01A-11R-A352-07 SHROOM3-NNMT 3 19 chr4:76689702:+ chr11:114297951:+ . NA TCGA-VN-A88L-01A-11R-A352-07 HDAC5-PPY 1 5 chr17:44110729:- chr17:43941214:- INFRAME NA TCGA-VN-A88L-01A-11R-A352-07 HIPK2-MYCBP2 1 3 chr7:139715932:- chr13:77158109:- FRAMESHIFT NA TCGA-VN-A88M-01A-11R-A352-07 WWTR1-ATR 29 116 chr3:149656876:- chr3:142449602:- FRAMESHIFT Likely Oncogenic NA TCGA-VN-A88M-01A-11R-A352-07 TMPRSS2-ERG 25 19 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-VN-A88N-01A-11R-A36G-07 LRBA-HFE2 4 13 chr4:150735258:- chr1:146019734:- FRAMESHIFT NA TCGA-VN-A88O-01A-11R-A352-07 CHD1-LIX1 2 1 chr5:98926334:- chr5:97124629:- FRAMESHIFT NA TCGA-VN-A88P-01A-11R-A352-07 ZNF148-MYLK 4 3 chr3:125323309:- chr3:123793844:- . NA TCGA-VN-A88P-01A-11R-A352-07 PPP1R12A-IMMT 3 3 chr12:79934695:- chr2:86181372:- INFRAME NA TCGA-VN-A88Q-01A-11R-A352-07 TMPRSS2-ERG 24 105 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-VN-A88R-01A-11R-A36G-07 ZFHX3-PMFBP1 1 10 chr16:72950469:- chr16:72140582:- INFRAME NA TCGA-VN-A88R-01A-11R-A36G-07 PIK3CB-CEP70 1 7 chr3:138733361:- chr3:138508544:- FRAMESHIFT Likely Oncogenic NA TCGA-VN-A88R-01A-11R-A36G-07 GSK3B-CD80 1 3 chr3:120002046:- chr3:119537418:- FRAMESHIFT NA TCGA-VN-A943-01A-11R-A41O-07 GALNT7-GAB1 8 8 chr4:173168961:+ chr4:143415477:+ INFRAME NA TCGA-VN-A943-01A-11R-A41O-07 ATF3-USH2A 4 5 chr1:212618234:+ chr1:215838103:- INFRAME NA TCGA-VN-A943-01A-11R-A41O-07 PARP8-ELL2 3 9 chr5:50668125:+ chr5:95943049:- FRAMESHIFT NA TCGA-VN-A943-01A-11R-A41O-07 TET3-PATL1 3 2 chr2:74003166:+ chr11:59659469:- FRAMESHIFT NA TCGA-VP-A872-01A-11R-A352-07 CUX2-CABP1 4 50 chr12:111263839:+ chr12:120659878:+ FRAMESHIFT NA TCGA-VP-A872-01A-11R-A352-07 TMPRSS2-ERG 7 35 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-VP-A872-01A-11R-A352-07 NFKBIA-TTC6 4 37 chr14:35403243:- chr14:37790717:+ INFRAME NA TCGA-VP-A872-01A-11R-A352-07 TTC6-ERCC6L2 1 2 chr14:37737734:+ chr9:95880869:+ FRAMESHIFT NA TCGA-VP-A875-01A-31R-A352-07 TMPRSS2-ERG 27 37 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-VP-A875-01A-31R-A352-07 TROVE2-CACNA1S 10 60 chr1:193059776:+ chr1:201070404:- . NA TCGA-VP-A875-01A-31R-A352-07 TRPM8-RAP1GAP 16 1 chr2:233954019:+ chr1:21611800:- INFRAME NA TCGA-VP-A875-01A-31R-A352-07 GSKIP-CLDN6 6 24 chr14:96379788:+ chr16:3015181:- . NA TCGA-VP-A875-01A-31R-A352-07 SLC4A4-GOLGA4 4 13 chr4:71547720:+ chr3:37355101:+ INFRAME NA TCGA-VP-A875-01A-31R-A352-07 AMD1-EPG5 2 18 chr6:110875215:+ chr18:45899566:- INFRAME NA TCGA-VP-A875-01A-31R-A352-07 KAT6B-SH3BP5L 3 12 chr10:74843478:+ chr1:248826521:- . NA TCGA-VP-A875-01A-31R-A352-07 MAP3K5-CLVS2 3 9 chr6:136650984:- chr6:123048622:+ INFRAME NA TCGA-VP-A875-01A-31R-A352-07 AP1B1-CLTCL1 2 12 chr22:29388424:- chr22:19234706:- . NA TCGA-VP-A875-01A-31R-A352-07 CLASP2-NMNAT3 2 9 chr3:33644757:- chr3:139579055:- INFRAME NA TCGA-VP-A875-01A-31R-A352-07 EZR-SNX9 2 9 chr6:158818082:- chr6:157896827:+ INFRAME NA TCGA-VP-A875-01A-31R-A352-07 AP3D1-KCTD19 2 7 chr19:2138619:- chr16:67320885:- INFRAME NA TCGA-VP-A875-01A-31R-A352-07 IFNGR1-SMCHD1 1 7 chr6:137219243:- chr18:2760652:+ FRAMESHIFT NA TCGA-VP-A875-01A-31R-A352-07 ARID1B-RAET1G 1 2 chr6:156779471:+ chr6:149919816:- INFRAME Likely Oncogenic NA TCGA-VP-A875-01A-31R-A352-07 KAT6A-FCGR1B 1 2 chr8:42048378:- chr1:121092996:+ FRAMESHIFT NA TCGA-VP-A876-01A-11R-A352-07 TMPRSS2-ERG 24 67 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-VP-A876-01A-11R-A352-07 GPR160-PDCD10 4 11 chr3:170039043:+ chr3:167687316:- . NA TCGA-VP-A876-01A-11R-A352-07 DDT-TPST2 3 7 chr22:23973768:- chr22:26544675:- . NA TCGA-VP-A876-01A-11R-A352-07 ABCC4-CCDC169 2 5 chr13:95186701:- chr13:36227381:- FRAMESHIFT NA TCGA-VP-A876-01A-11R-A352-07 SIPA1L2-TRIM11 2 3 chr1:232490874:- chr1:228402161:- INFRAME NA TCGA-VP-A876-01A-11R-A352-07 ZNF326-NEGR1 2 3 chr1:90005092:+ chr1:71698139:- INFRAME NA TCGA-VP-A876-01A-11R-A352-07 NCOR1-CCDC144A 2 1 chr17:16061401:- chr17:16761425:+ FRAMESHIFT Likely Oncogenic NA TCGA-VP-A878-01A-31R-A352-07 PCMTD1-ST18 2 8 chr8:51898930:- chr8:52230077:- . NA TCGA-VP-A879-01A-11R-A352-07 TMPRSS2-ERG 42 26 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-VP-A879-01A-11R-A352-07 CDH1-TRHDE 4 12 chr16:68801893:+ chr12:72377995:+ INFRAME Likely Oncogenic NA TCGA-VP-A87B-01A-11R-A352-07 SGMS1-VSTM4 4 19 chr10:50433476:- chr10:49019775:- . NA TCGA-VP-A87B-01A-11R-A352-07 SUMO1-MBD5 5 2 chr2:202220032:- chr2:148054391:+ . NA TCGA-VP-A87B-01A-11R-A352-07 UAP1-LIX1L 4 6 chr1:162566348:+ chr1:145947782:- INFRAME NA TCGA-VP-A87C-01A-11R-A352-07 SREBF1-STAT3 22 67 chr17:17823518:- chr17:42348539:- . NA TCGA-VP-A87C-01A-11R-A352-07 TMPRSS2-ERG 9 31 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-VP-A87D-01A-11R-A352-07 TMPRSS2-ERG 139 154 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-VP-A87D-01A-11R-A352-07 C14orf37-KIR2DL1 8 38 chr14:58131512:- chr19:54778612:+ INFRAME NA TCGA-VP-A87D-01A-11R-A352-07 GTF2E2-FBXO16 7 20 chr8:30635032:- chr8:28428736:- INFRAME NA TCGA-VP-A87D-01A-11R-A352-07 OCLN-CDK14 2 18 chr5:69509819:+ chr7:91207165:+ . NA TCGA-VP-A87D-01A-11R-A352-07 CYLD-FAM49B 3 5 chr16:50742841:+ chr8:129970995:- . NA TCGA-VP-A87D-01A-11R-A352-07 FBXO11-INTS9 2 7 chr2:47905489:- chr8:28813612:- FRAMESHIFT NA TCGA-VP-A87D-01A-11R-A352-07 FKBP1A-CTDP1 2 6 chr20:1392834:- chr18:79695225:+ FRAMESHIFT NA TCGA-VP-A87D-01A-11R-A352-07 NME7-KMO 1 2 chr1:169230718:- chr1:241586679:+ INFRAME NA TCGA-VP-A87D-01A-11R-A352-07 TPD52-C15orf65 1 1 chr8:80064478:- chr15:55418223:+ INFRAME NA TCGA-VP-A87J-01A-11R-A352-07 ARHGEF12-GRIK4 7 69 chr11:120337275:+ chr11:120940347:+ FRAMESHIFT NA TCGA-VP-A87J-01A-11R-A352-07 KIAA0907-ASH1L 4 18 chr1:155933633:- chr1:155459898:- FRAMESHIFT NA TCGA-VP-A87J-01A-11R-A352-07 PI4KA-FAM175A 6 9 chr22:20793193:- chr4:83482244:- INFRAME NA TCGA-VP-A87K-01A-11R-A352-07 TMPRSS2-ERG 211 176 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-VP-A87K-01A-11R-A352-07 DOPEY2-MYOSLID 37 85 chr21:36251284:+ chr2:207245289:+ . NA TCGA-VP-A87K-01A-11R-A352-07 ZZZ3-CXCL11 16 38 chr1:77683262:- chr4:76036064:- . NA TCGA-VP-A87K-01A-11R-A352-07 WBP1L-ADTRP 6 24 chr10:102798095:+ chr6:11768383:- FRAMESHIFT NA TCGA-VP-A87K-01A-11R-A352-07 PPP3CA-SEPT11 4 13 chr4:101346739:- chr4:76996425:+ FRAMESHIFT NA TCGA-VP-A87K-01A-11R-A352-07 ARHGEF38-COL25A1 4 12 chr4:105613507:+ chr4:108846219:- FRAMESHIFT NA TCGA-VP-A87K-01A-11R-A352-07 ACTR1A-STN1 4 10 chr10:102502600:- chr10:103882841:- FRAMESHIFT NA TCGA-VP-A87K-01A-11R-A352-07 SEC16B-EGF 3 5 chr1:177958134:- chr4:109993245:+ . NA TCGA-VP-A87K-01A-11R-A352-07 PDZRN3-EIF4E3 1 12 chr3:73602354:- chr3:71728623:- . NA TCGA-VP-A87K-01A-11R-A352-07 RBM19-CLK2 2 7 chr12:113927054:- chr1:155270977:- INFRAME NA TCGA-VP-A87K-01A-11R-A352-07 UGGT1-FOXP1 2 2 chr2:128182290:+ chr3:70978029:- FRAMESHIFT Likely Oncogenic NA TCGA-VP-A87K-01A-11R-A352-07 BICDL2-TP53 1 4 chr16:3028348:- chr17:7675236:- INFRAME Likely Oncogenic NA TCGA-VP-A87K-01A-11R-A352-07 SGPL1-BTBD9 1 4 chr10:70816880:+ chr6:38192597:- FRAMESHIFT NA TCGA-VP-AA1N-01A-31R-A41O-07 GALNT7-CEP44 60 310 chr4:173304118:+ chr4:174331482:+ INFRAME NA TCGA-WW-A8ZI-01A-11R-A37L-07 RAB4A-CNIH3 164 546 chr1:229299072:+ chr1:224521000:+ . NA TCGA-WW-A8ZI-01A-11R-A37L-07 ACPP-ZNF462 12 44 chr3:132317576:+ chr9:106923354:+ . NA TCGA-WW-A8ZI-01A-11R-A37L-07 TP53-ECSIT 3 7 chr17:7673535:- chr19:11519193:- . Likely Oncogenic NA TCGA-WW-A8ZI-01A-11R-A37L-07 NSD2-DOK7 1 3 chr4:1939778:+ chr4:3485539:+ INFRAME NA TCGA-X4-A8KQ-01A-12R-A36G-07 TMPRSS2-ERG 22 203 chr21:41494356:- chr21:38445621:- FRAMESHIFT Oncogenic NA TCGA-X4-A8KQ-01A-12R-A36G-07 DDX23-SLC25A10 6 36 chr12:48835527:- chr17:81717788:+ . NA TCGA-X4-A8KQ-01A-12R-A36G-07 SLC11A2-CDC27 5 3 chr12:51026315:- chr17:47129521:- . NA TCGA-XA-A8JR-01A-11R-A36G-07 LRBA-TPRG1-AS2 1 17 chr4:151014427:- chr3:189238956:- . NA TCGA-XJ-A83F-01A-11R-A352-07 TMPRSS2-ERG 185 460 chr21:41498119:- chr21:38423561:- FRAMESHIFT Oncogenic NA TCGA-XJ-A83F-01A-11R-A352-07 SLC45A3-TMPRSS2 1000 1000 chr1:205659489:- chr21:41494578:- INFRAME Likely Oncogenic NA TCGA-XJ-A83G-01A-11R-A352-07 IRS2-MYO16 1 3 chr13:109782042:- chr13:109206609:+ FRAMESHIFT NA TCGA-XJ-A83H-01A-11R-A352-07 TNK1-CHD3 4 6 chr17:7387457:+ chr17:7911464:+ INFRAME NA TCGA-XJ-A83H-01A-11R-A352-07 SMUG1-PPP2R5A 1 2 chr12:54182504:- chr1:212333497:+ INFRAME NA TCGA-XJ-A9DI-01A-11R-A37L-07 TMPRSS2-ERG 15 34 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-XJ-A9DI-01A-11R-A37L-07 AFF3-IL1B 9 38 chr2:99727077:- chr2:112836858:- . NA TCGA-XJ-A9DI-01A-11R-A37L-07 STAU1-CYP26B1 1 4 chr20:49151582:- chr2:72135419:- INFRAME NA TCGA-XJ-A9DK-01A-11R-A37L-07 SMG1-SNF8 7 26 chr16:18925950:- chr17:48941062:- FRAMESHIFT NA TCGA-XJ-A9DK-01A-11R-A37L-07 TBL1XR1-C7orf72 7 2 chr3:177197121:- chr7:50104314:+ . NA TCGA-XJ-A9DK-01A-11R-A37L-07 TMPRSS2-ERG 2 11 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-XJ-A9DK-01A-11R-A37L-07 TBL1XR1-AKR1E2 1 13 chr3:177098466:- chr10:4830675:+ . NA TCGA-XJ-A9DK-01A-11R-A37L-07 ASXL2-IDH1 1 9 chr2:25878166:- chr2:208251567:- . Likely Oncogenic NA TCGA-XJ-A9DQ-01A-11R-A37L-07 SLC45A3-ERG 8 91 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-XJ-A9DQ-01A-11R-A37L-07 MOV10-ZNHIT6 5 13 chr1:112675049:+ chr1:85680904:- INFRAME NA TCGA-XJ-A9DQ-01A-11R-A37L-07 AGPAT3-ELK4 3 9 chr21:43971490:+ chr1:205600794:- . NA TCGA-XJ-A9DQ-01A-11R-A37L-07 ELOVL5-CRYL1 2 2 chr6:53348817:- chr13:20489496:- . NA TCGA-XJ-A9DX-01A-11R-A37L-07 TBC1D23-TMEM45A 16 23 chr3:100279760:+ chr3:100568822:+ INFRAME NA TCGA-XJ-A9DX-01A-11R-A37L-07 BBS9-DPY19L2P3 9 29 chr7:33534176:+ chr7:29742147:+ . NA TCGA-XJ-A9DX-01A-11R-A37L-07 FZR1-CELF5 10 22 chr19:3506474:+ chr19:3293319:+ . NA TCGA-XJ-A9DX-01A-11R-A37L-07 REPS2-TXLNG 9 25 chrX:17133907:+ chrX:16834283:+ INFRAME NA TCGA-XJ-A9DX-01A-11R-A37L-07 PPM1H-WIF1 8 27 chr12:62737502:- chr12:65068904:- FRAMESHIFT NA TCGA-XJ-A9DX-01A-11R-A37L-07 ABHD17B-CCL25 1 51 chr9:71910634:- chr19:8053000:+ . NA TCGA-XJ-A9DX-01A-11R-A37L-07 ATP11B-HECW1 6 10 chr3:182842122:+ chr7:43507137:+ FRAMESHIFT NA TCGA-XJ-A9DX-01A-11R-A37L-07 CEMIP-KATNAL2 4 5 chr15:80909306:+ chr18:47046457:+ INFRAME NA TCGA-XJ-A9DX-01A-11R-A37L-07 MMP15-DRC7 1 8 chr16:58043627:+ chr16:57726068:+ FRAMESHIFT NA TCGA-XJ-A9DX-01A-11R-A37L-07 CARMIL1-CDKAL1 1 7 chr6:25556850:+ chr6:21198021:+ INFRAME NA TCGA-XJ-A9DX-01A-11R-A37L-07 FAM208A-ASB14 2 2 chr3:56633044:- chr3:57289123:- FRAMESHIFT NA TCGA-XJ-A9DX-01A-11R-A37L-07 RALGAPA1-SLC25A21 1 6 chr14:35595634:- chr14:36875004:- FRAMESHIFT NA TCGA-XJ-A9DX-01A-11R-A37L-07 PPP1R37-BCL3 1 1 chr19:45093527:+ chr19:44751227:+ INFRAME NA TCGA-XK-AAIV-01A-11R-A41O-07 TMPRSS2-EML4 137 878 chr21:41487240:- chr2:42331691:+ . Likely Oncogenic NA TCGA-XK-AAIV-01A-11R-A41O-07 NDRG1-MYC 24 99 chr8:133280235:- chr8:127738248:+ INFRAME Likely Oncogenic NA TCGA-XK-AAIV-01A-11R-A41O-07 ANKRD22-MSMB 31 50 chr10:88826038:- chr10:46040091:- INFRAME NA TCGA-XK-AAIV-01A-11R-A41O-07 NCOA2-SGSM3 24 75 chr8:70403700:- chr22:40400696:+ . NA TCGA-XK-AAIV-01A-11R-A41O-07 PPFIA1-INTS4 18 42 chr11:70355811:+ chr11:77883952:- FRAMESHIFT NA TCGA-XK-AAIV-01A-11R-A41O-07 FRMD8-PSMD9 15 27 chr11:65405068:+ chr12:121915856:+ FRAMESHIFT NA TCGA-XK-AAIV-01A-11R-A41O-07 HSF1-MICALL1 15 9 chr8:144291874:+ chr22:37911952:+ FRAMESHIFT NA TCGA-XK-AAIV-01A-11R-A41O-07 RBM47-LEF1 8 37 chr4:40629396:- chr4:108048751:- . NA TCGA-XK-AAIV-01A-11R-A41O-07 FAM168B-ANKRD42 4 29 chr2:131082577:- chr11:83224855:+ INFRAME NA TCGA-XK-AAIV-01A-11R-A41O-07 MAT2B-SFXN1 3 14 chr5:163505749:+ chr5:175492095:+ . NA TCGA-XK-AAIV-01A-11R-A41O-07 NTPCR-SMIM22 2 9 chr1:232956443:+ chr16:4794952:+ . NA TCGA-XK-AAIV-01A-11R-A41O-07 MTFR1-PEX2 2 3 chr8:65708011:+ chr8:76984195:- . NA TCGA-XK-AAIV-01A-11R-A41O-07 EIF4ENIF1-C22orf24 2 2 chr22:31471844:- chr22:31934449:- . NA TCGA-XK-AAIV-01A-11R-A41O-07 MAL2-FER1L6 1 2 chr8:119208604:+ chr8:123955992:+ . NA TCGA-XK-AAJA-01A-11R-A41O-07 BCL2L14-GPR19 2 22 chr12:12087386:+ chr12:12695511:- . NA TCGA-XK-AAJA-01A-11R-A41O-07 GALNT14-NRXN1 3 10 chr2:31137958:- chr2:49943791:- INFRAME NA TCGA-XK-AAJA-01A-11R-A41O-07 UCK2-FAM78B 4 5 chr1:165827932:+ chr1:166060663:- . NA TCGA-XK-AAJA-01A-11R-A41O-07 DYRK1A-KCNJ6 3 7 chr21:37420384:+ chr21:37715131:- INFRAME NA TCGA-XK-AAJA-01A-11R-A41O-07 PRKCE-QPCT 2 11 chr2:45652448:+ chr2:37352789:+ INFRAME NA TCGA-XK-AAJA-01A-11R-A41O-07 GSK3B-PLA1A 2 9 chr3:119905755:- chr3:119628701:+ FRAMESHIFT NA TCGA-XK-AAJA-01A-11R-A41O-07 ANAPC4-RBPJ 2 5 chr4:25396899:+ chr4:26406175:+ INFRAME NA TCGA-XK-AAJA-01A-11R-A41O-07 COPS7A-CLSTN3 2 3 chr12:6730820:+ chr12:7157489:+ FRAMESHIFT NA TCGA-XK-AAJA-01A-11R-A41O-07 CPEB2-LDB2 2 3 chr4:15007586:+ chr4:16512104:- INFRAME NA TCGA-XK-AAJA-01A-11R-A41O-07 SLC25A40-ADAM22 1 7 chr7:87846949:- chr7:88193116:+ FRAMESHIFT NA TCGA-XK-AAJA-01A-11R-A41O-07 EVI5-HFM1 1 3 chr1:92563642:- chr1:91277062:- FRAMESHIFT NA TCGA-XK-AAJA-01A-11R-A41O-07 APC-MCC 1 1 chr5:112707882:+ chr5:113151422:- INFRAME Likely Oncogenic NA TCGA-XK-AAJT-01A-11R-A41O-07 BANK1-C4orf22 14 32 chr4:101918189:+ chr4:80963517:+ INFRAME NA TCGA-XQ-A8TA-01A-11R-A36G-07 VAV2-COL27A1 63 251 chr9:133939103:- chr9:114284724:+ INFRAME NA TCGA-XQ-A8TA-01A-11R-A36G-07 RGS3-ABCA1 20 47 chr9:113463881:+ chr9:104840519:- FRAMESHIFT NA TCGA-XQ-A8TA-01A-11R-A36G-07 CDC14B-AUH 9 69 chr9:96619219:- chr9:91298076:- INFRAME NA TCGA-XQ-A8TA-01A-11R-A36G-07 TMEM8A-YBX3 9 32 chr16:381701:- chr12:10704148:- FRAMESHIFT NA TCGA-XQ-A8TA-01A-11R-A36G-07 USPL1-ANKRD7 7 21 chr13:30618056:+ chr7:118259837:+ . NA TCGA-XQ-A8TA-01A-11R-A36G-07 STX17-DAB2IP 11 3 chr9:99906706:+ chr9:121757013:+ . NA TCGA-XQ-A8TA-01A-11R-A36G-07 YBX3-TMEM8A 3 26 chr12:10709908:- chr16:377848:- FRAMESHIFT NA TCGA-XQ-A8TA-01A-11R-A36G-07 SNX30-ALDOB 4 16 chr9:112880594:+ chr9:101421904:- . NA TCGA-XQ-A8TA-01A-11R-A36G-07 EZH1-IGFBP5 4 14 chr17:42727635:- chr2:216679079:- FRAMESHIFT NA TCGA-XQ-A8TA-01A-11R-A36G-07 ANAPC7-PAH 4 10 chr12:110403527:- chr12:102877550:- INFRAME NA TCGA-XQ-A8TA-01A-11R-A36G-07 FANCC-ROR2 3 13 chr9:95240649:- chr9:91775818:- FRAMESHIFT Likely Oncogenic NA TCGA-XQ-A8TA-01A-11R-A36G-07 FAM134B-TPPP 4 6 chr5:16565763:- chr5:678064:- . NA TCGA-XQ-A8TA-01A-11R-A36G-07 GOLPH3L-CTSS 1 12 chr1:150661814:- chr1:150755150:- FRAMESHIFT NA TCGA-XQ-A8TA-01A-11R-A36G-07 NOTCH2-SEC22B 1 3 chr1:119996997:- chr1:120168949:- FRAMESHIFT NA TCGA-XQ-A8TB-01A-11R-A36G-07 TMPRSS2-ERG 37 32 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-XQ-A8TB-01A-11R-A36G-07 ANKRD22-LRRTM3 7 23 chr10:88851587:- chr10:67097587:+ INFRAME NA TCGA-XQ-A8TB-01A-11R-A36G-07 ERG-ABCC4 3 15 chr21:38575662:- chr13:95247753:- FRAMESHIFT Likely Oncogenic NA TCGA-XQ-A8TB-01A-11R-A36G-07 PTPRJ-PPP2CB 4 2 chr11:48146963:+ chr8:30791315:- FRAMESHIFT NA TCGA-XQ-A8TB-01A-11R-A36G-07 TCF12-RNF111 1 7 chr15:57234107:+ chr15:59030804:+ FRAMESHIFT NA TCGA-Y6-A9XI-01A-11R-A41O-07 NCOA4-SRSF7 24 91 chr10:46030526:- chr2:38750194:- . NA TCGA-Y6-A9XI-01A-11R-A41O-07 GTF2B-ODF2L 5 28 chr1:88891483:- chr1:86360536:- FRAMESHIFT NA TCGA-Y6-A9XI-01A-11R-A41O-07 ARID5B-KAT6A 4 19 chr10:62092701:+ chr8:41981954:- INFRAME Likely Oncogenic NA TCGA-Y6-A9XI-01A-11R-A41O-07 AGAP1-RHOU 3 11 chr2:235494849:+ chr1:228743285:+ FRAMESHIFT NA TCGA-Y6-A9XI-01A-11R-A41O-07 PLD1-LMBR1 2 14 chr3:171771195:- chr7:156836885:- . NA TCGA-Y6-A9XI-01A-11R-A41O-07 KAT6A-VDAC3 1 13 chr8:41987455:- chr8:42393845:+ . NA TCGA-Y6-A9XI-01A-11R-A41O-07 AXIN1-PDCD2 1 8 chr16:346148:- chr6:170578970:- FRAMESHIFT Likely Oncogenic NA TCGA-YJ-A8SW-01A-11R-A37L-07 CNTNAP2-GSTK1 44 119 chr7:146839904:+ chr7:143263148:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 HDLBP-NSRP1 20 80 chr2:241229833:- chr17:30172542:+ INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 EPS15L1-CPAMD8 25 34 chr19:16471913:- chr19:16938446:- INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 DYNC1H1-EVL 16 62 chr14:102012470:+ chr14:100084687:+ FRAMESHIFT NA TCGA-YJ-A8SW-01A-11R-A37L-07 ANO7-RALBP1 12 62 chr2:241218381:+ chr18:9530834:+ FRAMESHIFT NA TCGA-YJ-A8SW-01A-11R-A37L-07 PRUNE1-RAB7A 7 66 chr1:151008671:+ chr3:128795360:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 FAM49A-RAD51AP2 5 39 chr2:16623864:- chr2:17510955:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 LUC7L2-MRPS33 7 27 chr7:139376156:+ chr7:141010660:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 PCMTD1-ST18 4 30 chr8:51845661:- chr8:52230077:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 PVT1-RNF139 7 11 chr8:127794734:+ chr8:124485831:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 FRYL-OCIAD2 6 12 chr4:48780078:- chr4:48904611:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 SMOX-PANK2 8 4 chr20:4148977:+ chr20:3907926:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 NSRP1-CDK12 3 23 chr17:30116863:+ chr17:39490557:+ INFRAME Likely Oncogenic NA TCGA-YJ-A8SW-01A-11R-A37L-07 ZNF417-KIR2DL3 3 23 chr19:57909386:- chr19:54739507:+ INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 DHX30-LIMD1 4 13 chr3:47803212:+ chr3:45665650:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 PAQR3-ANTXR2 5 9 chr4:78926521:- chr4:79984863:- INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 CCSER1-AFF1 3 15 chr4:90127831:+ chr4:87046166:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 IFT43-RBM25 3 9 chr14:75988977:+ chr14:73076319:+ FRAMESHIFT NA TCGA-YJ-A8SW-01A-11R-A37L-07 FARS2-RIPK1 1 12 chr6:5545340:+ chr6:3076764:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 CMTM8-ZNF385D 3 3 chr3:32239119:+ chr3:22169035:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 FCHSD2-C2CD3 2 6 chr11:73140031:- chr11:74139828:- FRAMESHIFT NA TCGA-YJ-A8SW-01A-11R-A37L-07 NDUFB5-NAALADL2 3 2 chr3:179618521:+ chr3:175233931:+ INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 SASH1-ADGB 2 5 chr6:148343223:+ chr6:146644773:+ INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 SLK-INA 2 4 chr10:103967895:+ chr10:103287035:+ INFRAME NA TCGA-YJ-A8SW-01A-11R-A37L-07 FNIP2-LRAT 1 6 chr4:158769319:+ chr4:154728703:+ . NA TCGA-YJ-A8SW-01A-11R-A37L-07 RNF19A-RRM2B 1 5 chr8:100309867:- chr8:102218947:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 BEND7-FRMD4A 1 4 chr10:13526138:- chr10:13796588:- . NA TCGA-YJ-A8SW-01A-11R-A37L-07 GLG1-BCAR1 1 3 chr16:74606657:- chr16:75243090:- INFRAME NA TCGA-YL-A8HJ-01A-11R-A36G-07 TMPRSS2-ERG 92 112 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-YL-A8HK-01A-11R-A36G-07 TMPRSS2-ERG 14 106 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-YL-A8HK-01A-11R-A36G-07 MRPL40-TMCC3 1 12 chr22:19433348:+ chr12:94582538:- FRAMESHIFT NA TCGA-YL-A8HL-01A-11R-A36G-07 TMPRSS2-ERG 108 124 chr21:41508081:- chr21:38423561:- . Oncogenic NA TCGA-YL-A8HL-01A-11R-A36G-07 ARFGAP2-FBRSL1 5 16 chr11:47166268:- chr12:132567481:+ INFRAME NA TCGA-YL-A8HL-01A-11R-A36G-07 HAUS8-SGTA 1 21 chr19:17073274:- chr19:2759294:- FRAMESHIFT NA TCGA-YL-A8HL-01A-11R-A36G-07 KAT6B-CORO7 1 20 chr10:75025249:+ chr16:4395339:- FRAMESHIFT NA TCGA-YL-A8HL-01A-11R-A36G-07 CORO7-GFOD2 1 14 chr16:4405491:- chr16:67676053:- INFRAME NA TCGA-YL-A8HL-01A-11R-A36G-07 NRF1-PPP2R5A 2 5 chr7:129717376:+ chr1:212329135:+ FRAMESHIFT NA TCGA-YL-A8HL-01A-11R-A36G-07 C11orf49-NUP98 2 3 chr11:47161190:+ chr11:3713995:- INFRAME NA TCGA-YL-A8HM-01A-11R-A36G-07 CEP170-IFI16 6 16 chr1:243255040:- chr1:159010003:+ . NA TCGA-YL-A8HM-01A-11R-A36G-07 ELAVL2-CFTR 2 22 chr9:23825806:- chr7:117664688:+ . NA TCGA-YL-A8HM-01A-11R-A36G-07 TMED10-PSMD11 4 3 chr14:75147664:- chr17:32446945:+ FRAMESHIFT NA TCGA-YL-A8HM-01A-11R-A36G-07 MFGE8-RLBP1 2 9 chr15:88905757:- chr15:89210809:- FRAMESHIFT NA TCGA-YL-A8HM-01A-11R-A36G-07 PHC2-HSP90AA1 3 4 chr1:33328870:- chr14:102102085:- FRAMESHIFT NA TCGA-YL-A8HM-01A-11R-A36G-07 LDLRAD4-NOVA1 1 9 chr18:13278188:+ chr14:26480143:- . NA TCGA-YL-A8HO-01A-11R-A36G-07 LARP4-HPD 6 9 chr12:50430570:+ chr12:121847214:- INFRAME NA TCGA-YL-A8HO-01A-11R-A36G-07 AFF3-HDAC5 1 2 chr2:100006632:- chr17:44117704:- . NA TCGA-YL-A8S8-01A-11R-A37L-07 BANK1-GSTCD 41 204 chr4:102043907:+ chr4:105822954:+ INFRAME NA TCGA-YL-A8S8-01A-11R-A37L-07 FAM171B-KYNU 6 40 chr2:186694411:+ chr2:142885349:+ . NA TCGA-YL-A8S8-01A-11R-A37L-07 YTHDC1-TMPRSS11F 5 17 chr4:68338283:- chr4:68074009:- FRAMESHIFT NA TCGA-YL-A8S8-01A-11R-A37L-07 DLG2-CARD17 3 7 chr11:83541682:- chr11:105099421:- FRAMESHIFT NA TCGA-YL-A8S9-01A-11R-A37L-07 TERF2IP-AMY1C 74 186 chr16:75648552:+ chr1:103758469:+ FRAMESHIFT NA TCGA-YL-A8S9-01A-11R-A37L-07 GPR89B-HOOK3 6 12 chr1:147944098:+ chr8:42925557:+ FRAMESHIFT NA TCGA-YL-A8SA-01A-21R-A37L-07 TMPRSS2-ERG 33 127 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-YL-A8SA-01A-21R-A37L-07 SEC24A-C10orf11 13 23 chr5:134649173:+ chr10:76036008:+ FRAMESHIFT NA TCGA-YL-A8SA-01A-21R-A37L-07 BTBD9-LASP1 4 15 chr6:38639800:- chr17:38878086:+ . NA TCGA-YL-A8SA-01A-21R-A37L-07 FOXP1-HRH1 1 3 chr3:71198202:- chr3:11259003:+ . Likely Oncogenic NA TCGA-YL-A8SA-01A-21R-A37L-07 ARHGAP12-SVIL 1 2 chr10:31826304:- chr10:29686651:- . NA TCGA-YL-A8SB-01A-31R-A37L-07 SCX-ZNF627 16 38 chr8:144268444:+ chr19:11617054:+ . NA TCGA-YL-A8SB-01A-31R-A37L-07 MAF1-TMEM205 9 33 chr8:144106464:+ chr19:11345628:- . NA TCGA-YL-A8SB-01A-31R-A37L-07 MINK1-SIGLEC17P 4 21 chr17:4833640:+ chr19:51167375:+ . NA TCGA-YL-A8SC-01A-11R-A37L-07 SCP2-TMPRSS2 2 23 chr1:53039046:+ chr21:41489593:- INFRAME Likely Oncogenic NA TCGA-YL-A8SC-01A-11R-A37L-07 MYOZ2-PNKD 2 5 chr4:119136601:+ chr2:218317955:+ . NA TCGA-YL-A8SF-01A-11R-A37L-07 TMPRSS2-ERG 70 292 chr21:41498119:- chr21:38445621:- INFRAME Oncogenic NA TCGA-YL-A8SF-01A-11R-A37L-07 FUBP1-DNAJB4 15 5 chr1:77978885:- chr1:78013051:+ FRAMESHIFT Likely Oncogenic NA TCGA-YL-A8SF-01A-11R-A37L-07 RFWD2-MSH4 1 5 chr1:176149006:- chr1:75912696:+ INFRAME NA TCGA-YL-A8SF-01A-11R-A37L-07 CASKIN2-PDE2A 1 2 chr17:75513711:- chr11:72642326:- INFRAME NA TCGA-YL-A8SH-01B-11R-A37L-07 PRRC1-SPINK6 8 21 chr5:127517776:+ chr5:148214905:+ . NA TCGA-YL-A8SH-01B-11R-A37L-07 EIF3E-PHF20L1 2 6 chr8:108228267:- chr8:132794410:+ INFRAME NA TCGA-YL-A8SH-01B-11R-A37L-07 CTNND1-DTX4 1 4 chr11:57762046:+ chr11:59181739:+ . NA TCGA-YL-A8SJ-01B-11R-A37L-07 HMGN2P46-PRKCI 19 273 chr15:45513963:+ chr3:170291854:+ . NA TCGA-YL-A8SJ-01B-11R-A37L-07 TP53INP1-CCDC144B 9 11 chr8:94930540:- chr17:18554266:- . NA TCGA-YL-A8SJ-01B-11R-A37L-07 ARPC1A-VAMP4 3 9 chr7:99326004:+ chr1:171738463:- . NA TCGA-YL-A8SK-01B-21R-A37L-07 ARHGAP32-PRDM10 5 4 chr11:129093621:- chr11:129912225:- INFRAME NA TCGA-YL-A8SK-01B-21R-A37L-07 ANKRD13C-FZR1 1 4 chr1:70324853:- chr19:3522956:+ . NA TCGA-YL-A8SL-01B-21R-A37L-07 TMPRSS2-ERG 69 61 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-YL-A8SL-01B-21R-A37L-07 CEP350-LEPROT 4 13 chr1:180078674:+ chr1:65431803:+ INFRAME NA TCGA-YL-A8SL-01B-21R-A37L-07 CR1L-C1orf116 1 13 chr1:207701618:+ chr1:207027679:- . NA TCGA-YL-A8SO-01B-31R-A37L-07 ELP3-FZD3 8 11 chr8:28093233:+ chr8:28520638:+ FRAMESHIFT NA TCGA-YL-A8SO-01B-31R-A37L-07 RFX7-DYX1C1 3 7 chr15:56243125:- chr15:55450367:- . NA TCGA-YL-A8SP-01B-11R-A37L-07 TMPRSS2-ERG 23 48 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-YL-A8SP-01B-11R-A37L-07 KMT2C-FUT9 4 17 chr7:152251939:- chr6:96203148:+ . Likely Oncogenic NA TCGA-YL-A8SP-01B-11R-A37L-07 CYB5R4-FNDC1 2 2 chr6:83864328:+ chr6:159197431:+ INFRAME NA TCGA-YL-A8SP-01B-11R-A37L-07 FRYL-OCIAD2 1 6 chr4:48684673:- chr4:48904611:- . NA TCGA-YL-A8SP-01B-11R-A37L-07 UBE2N-APPL2 1 6 chr12:93441855:- chr12:105229223:- INFRAME NA TCGA-YL-A8SP-01B-11R-A37L-07 ZSCAN22-NOSIP 1 5 chr19:58327114:+ chr19:49560692:- . NA TCGA-YL-A8SQ-01B-11R-A37L-07 ATP11A-DHRS12 4 10 chr13:112862575:+ chr13:51791257:- INFRAME NA TCGA-YL-A8SR-01B-11R-A37L-07 RBM47-IDO2 8 57 chr4:40514516:- chr8:39949149:+ . NA TCGA-YL-A8SR-01B-11R-A37L-07 ZNF292-EYS 6 24 chr6:87155759:+ chr6:65495993:- . NA TCGA-YL-A8SR-01B-11R-A37L-07 GATAD2B-LELP1 4 11 chr1:153922733:- chr1:153204687:+ . NA TCGA-YL-A8SR-01B-11R-A37L-07 EYS-ADGRB3 1 6 chr6:65295863:- chr6:69324872:+ FRAMESHIFT NA TCGA-YL-A9WH-01A-11R-A37L-07 TTC6-HOXA1 28 79 chr14:37596008:+ chr7:27095355:- . NA TCGA-YL-A9WH-01A-11R-A37L-07 HERC1-SNX6 3 31 chr15:63833827:- chr14:34563175:- . NA TCGA-YL-A9WH-01A-11R-A37L-07 TNKS2-HECTD2 4 17 chr10:91842391:+ chr10:91460427:+ INFRAME NA TCGA-YL-A9WH-01A-11R-A37L-07 VWDE-HOTAIRM1 2 12 chr7:12367357:- chr7:27099779:+ . NA TCGA-YL-A9WJ-01A-11R-A37L-07 SENP6-ACACB 20 46 chr6:75623958:+ chr12:109242435:+ . NA TCGA-YL-A9WJ-01A-11R-A37L-07 TESC-ASAH1 20 35 chr12:117099225:- chr8:18075587:- INFRAME NA TCGA-YL-A9WK-01A-11R-A37L-07 PCNP-ATR 23 68 chr3:101580004:+ chr3:142466533:- INFRAME Likely Oncogenic NA TCGA-YL-A9WK-01A-11R-A37L-07 EHD1-BATF2 2 7 chr11:64874421:- chr11:64994549:- FRAMESHIFT NA TCGA-YL-A9WL-01A-11R-A41O-07 ZFHX3-ENY2 28 459 chr16:72811577:- chr8:109343405:+ FRAMESHIFT NA TCGA-YL-A9WL-01A-11R-A41O-07 TMPRSS2-ERG 67 234 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-YL-A9WL-01A-11R-A41O-07 MBD3-GAK 46 76 chr19:1592618:- chr4:877809:- INFRAME NA TCGA-YL-A9WL-01A-11R-A41O-07 ARHGEF38-ZNF622 17 62 chr4:105552961:+ chr5:16463742:- INFRAME NA TCGA-YL-A9WL-01A-11R-A41O-07 URI1-WDR88 14 58 chr19:29942664:+ chr19:33164197:+ INFRAME NA TCGA-YL-A9WL-01A-11R-A41O-07 GAK-MEX3D 14 30 chr4:881907:- chr19:1556923:- FRAMESHIFT NA TCGA-YL-A9WL-01A-11R-A41O-07 ENY2-NSF 4 14 chr8:109340563:+ chr17:46674414:+ INFRAME NA TCGA-YL-A9WL-01A-11R-A41O-07 IL6ST-LAMC2 6 5 chr5:55951464:- chr1:183207881:+ INFRAME NA TCGA-YL-A9WL-01A-11R-A41O-07 SCD5-ANTXR2 4 7 chr4:82798306:- chr4:80018976:- FRAMESHIFT NA TCGA-YL-A9WL-01A-11R-A41O-07 BIRC6-EML4 2 9 chr2:32549481:+ chr2:42288227:+ FRAMESHIFT NA TCGA-YL-A9WL-01A-11R-A41O-07 SKIV2L2-BASP1 1 7 chr5:55416132:+ chr5:17275208:+ . NA TCGA-YL-A9WL-01A-11R-A41O-07 ATF7IP-TXNRD1 1 5 chr12:14385400:+ chr12:104251527:+ FRAMESHIFT NA TCGA-YL-A9WL-01A-11R-A41O-07 DENND6A-FHIT 1 3 chr3:57692782:- chr3:59922414:- INFRAME NA TCGA-YL-A9WX-01A-21R-A41O-07 TMPRSS2-ERG 26 29 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-YL-A9WX-01A-21R-A41O-07 SLC45A3-ERG 4 15 chr1:205680394:- chr21:38445621:- . Likely Oncogenic NA TCGA-YL-A9WY-01A-11R-A41O-07 CSPP1-CPA6 12 117 chr8:67064496:+ chr8:67434240:- FRAMESHIFT NA TCGA-YL-A9WY-01A-11R-A41O-07 USP6NL-ANKRD16 11 33 chr10:11597631:- chr10:5862691:- . NA TCGA-YL-A9WY-01A-11R-A41O-07 NSFP1-ATP6V0E1 5 28 chr17:46412870:+ chr5:173020238:+ . NA TCGA-YL-A9WY-01A-11R-A41O-07 AKAP10-GID4 4 16 chr17:19936286:- chr17:18058868:+ INFRAME NA TCGA-YL-A9WY-01A-11R-A41O-07 ANKIB1-CDK14 4 16 chr7:92246519:+ chr7:91207165:+ . NA TCGA-YL-A9WY-01A-11R-A41O-07 PIK3R1-MRPL42 1 15 chr5:68227009:+ chr12:93469189:+ . Likely Oncogenic NA TCGA-YL-A9WY-01A-11R-A41O-07 USP6NL-GDI2 2 8 chr10:11597631:- chr10:5800705:- FRAMESHIFT NA TCGA-YL-A9WY-01A-11R-A41O-07 JADE2-SGCD 2 5 chr5:134538083:+ chr5:156329534:+ . NA TCGA-ZG-A8QW-01A-11R-A37L-07 PVT1-TNFRSF19 3 10 chr8:127890998:+ chr13:23667980:+ . NA TCGA-ZG-A8QW-01A-11R-A37L-07 RAPGEF2-RAB3IP 1 9 chr4:159193256:+ chr12:69794437:+ FRAMESHIFT NA TCGA-ZG-A8QW-01A-11R-A37L-07 VPS26A-AGBL4 1 8 chr10:69158211:+ chr1:49045800:- INFRAME NA TCGA-ZG-A8QX-01A-11R-A37L-07 RASA1-FAM174A 7 20 chr5:87353235:+ chr5:100562054:+ FRAMESHIFT Likely Oncogenic NA TCGA-ZG-A8QX-01A-11R-A37L-07 GRB10-ZPBP 5 22 chr7:50732272:- chr7:49937622:- FRAMESHIFT NA TCGA-ZG-A8QY-01A-11R-A37L-07 CYB561D2-ERC2 3 25 chr3:50350982:+ chr3:56019033:- . NA TCGA-ZG-A8QY-01A-11R-A37L-07 UTP20-SCYL2 4 3 chr12:101319635:+ chr12:100334166:+ INFRAME NA TCGA-ZG-A8QY-01A-11R-A37L-07 RLIM-FTX 1 8 chrX:74614422:- chrX:74130947:- . NA TCGA-ZG-A8QY-01A-11R-A37L-07 ERC2-ELP6 2 2 chr3:55992057:- chr3:47498432:- FRAMESHIFT NA TCGA-ZG-A8QZ-01A-11R-A37L-07 TMPRSS2-ERG 25 74 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-ZG-A8QZ-01A-11R-A37L-07 SETD5-GADL1 23 47 chr3:9397977:+ chr3:30857141:- . NA TCGA-ZG-A8QZ-01A-11R-A37L-07 DYNLT1-DUSP15 5 26 chr6:158641319:- chr20:31869597:- INFRAME NA TCGA-ZG-A8QZ-01A-11R-A37L-07 DHRS12-TSC22D1 3 10 chr13:51804054:- chr13:44436095:- INFRAME NA TCGA-ZG-A8QZ-01A-11R-A37L-07 ORC5-R3HDM2 3 8 chr7:104195143:- chr12:57395818:- . NA TCGA-ZG-A8QZ-01A-11R-A37L-07 SYNJ2-KIF25 2 9 chr6:157982088:+ chr6:168038553:+ INFRAME NA TCGA-ZG-A8QZ-01A-11R-A37L-07 TSC22D1-CCDC122 2 8 chr13:44573163:- chr13:43874927:- . NA TCGA-ZG-A9KY-01A-11R-A41O-07 CHD6-PTPRT 14 9 chr20:41618340:- chr20:42248822:- . Likely Oncogenic NA TCGA-ZG-A9KY-01A-11R-A41O-07 MAST2-ST3GAL3 9 28 chr1:45882395:+ chr1:43899541:+ INFRAME NA TCGA-ZG-A9KY-01A-11R-A41O-07 GSK3B-SEMA5B 6 38 chr3:119863419:- chr3:122948709:- INFRAME NA TCGA-ZG-A9KY-01A-11R-A41O-07 R3HDM2-ANKRD24 10 22 chr12:57395749:- chr19:4212475:+ . NA TCGA-ZG-A9KY-01A-11R-A41O-07 CCDC22-KRBOX4 10 16 chrX:49243462:+ chrX:46450431:+ . NA TCGA-ZG-A9KY-01A-11R-A41O-07 AKT3-ADSS 6 21 chr1:243843125:- chr1:244437768:- FRAMESHIFT Likely Oncogenic NA TCGA-ZG-A9KY-01A-11R-A41O-07 KDM4B-ATCAY 5 18 chr19:5047669:+ chr19:3902487:+ INFRAME NA TCGA-ZG-A9KY-01A-11R-A41O-07 FAF1-TTC39A 4 18 chr1:50655442:- chr1:51296170:- INFRAME NA TCGA-ZG-A9KY-01A-11R-A41O-07 EME2-CLUAP1 4 10 chr16:1780667:+ chr16:3530568:+ . NA TCGA-ZG-A9KY-01A-11R-A41O-07 BCAS3-CA4 2 13 chr17:60924500:+ chr17:60170551:+ . NA TCGA-ZG-A9KY-01A-11R-A41O-07 CCDC57-RAB40B 1 13 chr17:82151560:- chr17:82664556:- INFRAME NA TCGA-ZG-A9KY-01A-11R-A41O-07 GABRB3-TJP1 2 7 chr15:26772402:- chr15:29800702:- INFRAME NA TCGA-ZG-A9KY-01A-11R-A41O-07 PEMT-TOP3A 1 9 chr17:17576920:- chr17:18280658:- FRAMESHIFT NA TCGA-ZG-A9KY-01A-11R-A41O-07 RALGPS2-RASAL2 2 5 chr1:178821704:+ chr1:178390100:+ FRAMESHIFT NA TCGA-ZG-A9KY-01A-11R-A41O-07 SEMA4B-PIAS1 1 3 chr15:90185081:+ chr15:68187542:+ . NA TCGA-ZG-A9KY-01A-11R-A41O-07 DTX2-POR 1000 1000 chr7:76463709:+ chr7:75953989:+ . NA TCGA-ZG-A9L0-01A-11R-A41O-07 MTMR2-TCP11L1 2 21 chr11:95914242:- chr11:33072474:+ . NA TCGA-ZG-A9L1-01A-11R-A41O-07 TMPRSS2-ERG 22 19 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-ZG-A9L1-01A-11R-A41O-07 PERP-CASK 10 9 chr6:138107127:- chrX:41787283:- INFRAME NA TCGA-ZG-A9L1-01A-11R-A41O-07 CUX1-YEATS2 1 35 chr7:101816093:+ chr3:183772305:+ INFRAME NA TCGA-ZG-A9L1-01A-11R-A41O-07 SCAF4-TTC6 1 3 chr21:31731663:- chr14:37968445:+ . NA TCGA-ZG-A9L2-01A-31R-A41O-07 TMPRSS2-PDE9A 22 56 chr21:41494356:- chr21:42743776:+ INFRAME Likely Oncogenic NA TCGA-ZG-A9L2-01A-31R-A41O-07 PDE9A-TMPRSS2 17 40 chr21:42733426:+ chr21:41498189:- INFRAME Likely Oncogenic NA TCGA-ZG-A9L2-01A-31R-A41O-07 TMPRSS2-ERG 14 18 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-ZG-A9L2-01A-31R-A41O-07 FAM210A-PSMG2 9 20 chr18:13726329:- chr18:12712702:+ . NA TCGA-ZG-A9L2-01A-31R-A41O-07 PSMG2-SETMAR 6 26 chr18:12706721:+ chr3:4312898:+ FRAMESHIFT NA TCGA-ZG-A9L2-01A-31R-A41O-07 IL6ST-DDX4 3 34 chr5:55976215:- chr5:55738950:+ . NA TCGA-ZG-A9L2-01A-31R-A41O-07 IP6K1-HYAL3 2 24 chr3:49786354:- chr3:50293515:- . NA TCGA-ZG-A9L4-01A-11R-A41O-07 TMPRSS2-ERG 36 54 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-ZG-A9L4-01A-11R-A41O-07 SLC45A2-CCDC125 7 13 chr5:33982236:- chr5:69285467:- INFRAME NA TCGA-ZG-A9L4-01A-11R-A41O-07 ITFG1-SLC45A2 1 18 chr16:47311240:- chr5:33964016:- FRAMESHIFT NA TCGA-ZG-A9L4-01A-11R-A41O-07 MYL6-WDR13 1 2 chr12:56160320:+ chrX:48601784:+ FRAMESHIFT NA TCGA-ZG-A9L5-01A-12R-A41O-07 TMPRSS2-ETV5 433 1532 chr21:41494356:- chr3:186105942:- . Likely Oncogenic NA TCGA-ZG-A9L5-01A-12R-A41O-07 TMPRSS2-DGKG 433 1441 chr21:41494356:- chr3:186105942:- . Likely Oncogenic NA TCGA-ZG-A9L5-01A-12R-A41O-07 MYO1E-C9orf3 19 70 chr15:59256284:- chr9:95060694:+ FRAMESHIFT NA TCGA-ZG-A9L5-01A-12R-A41O-07 MYL6-TPM3P9 9 64 chr12:56162331:+ chr19:53439828:+ . NA TCGA-ZG-A9L5-01A-12R-A41O-07 GTF2A2-MYO1E 2 56 chr15:59657406:- chr15:59236672:- . NA TCGA-ZG-A9L5-01A-12R-A41O-07 SMARCC2-RHPN2 8 13 chr12:56163580:- chr19:33026632:- . NA TCGA-ZG-A9L5-01A-12R-A41O-07 MROH1-PKMYT1 2 19 chr8:144200541:+ chr16:2977031:- INFRAME NA TCGA-ZG-A9L5-01A-12R-A41O-07 ZNF761-SARNP 2 12 chr19:53449638:+ chr12:55803728:- FRAMESHIFT NA TCGA-ZG-A9L5-01A-12R-A41O-07 LAMP2-NKAP 2 11 chrX:120469106:- chrX:119930165:- FRAMESHIFT NA TCGA-ZG-A9L5-01A-12R-A41O-07 DOCK3-SLC9A5 1 3 chr3:50841715:+ chr16:67270738:+ FRAMESHIFT NA TCGA-ZG-A9L5-01A-12R-A41O-07 MYL6-ZNF761 1 2 chr12:56162331:+ chr19:53445001:+ . NA TCGA-ZG-A9L5-01A-12R-A41O-07 ZNF140-ZNF268 1000 1000 chr12:133106866:+ chr12:133209693:+ . NA TCGA-ZG-A9L6-01A-11R-A41O-07 COA1-GCK 1 9 chr7:43729429:- chr7:44153463:- . NA TCGA-ZG-A9L9-01A-11R-A41O-07 TFAP2A-CDK5RAP1 3 5 chr6:10402492:- chr20:33370629:- INFRAME NA TCGA-ZG-A9L9-01A-11R-A41O-07 TMPRSS2-ERG 2 8 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-ZG-A9LB-01A-11R-A41O-07 LSM1-ASH2L 1 4 chr8:38171965:- chr8:38106378:+ FRAMESHIFT NA TCGA-ZG-A9LB-01A-11R-A41O-07 OAT-CDYL 1 1 chr10:124400840:- chr6:4943546:+ FRAMESHIFT NA TCGA-ZG-A9LM-01A-11R-A41O-07 MAP3K10-ALDH16A1 22 35 chr19:40192713:+ chr19:49468381:+ FRAMESHIFT NA TCGA-ZG-A9LM-01A-11R-A41O-07 TMEFF2-TMPRSS11B 13 52 chr2:192179668:- chr4:68232416:- INFRAME NA TCGA-ZG-A9LM-01A-11R-A41O-07 TTI1-C3orf67 5 5 chr20:38002628:- chr3:58884709:- FRAMESHIFT NA TCGA-ZG-A9LN-01A-11R-A41O-07 ACPP-RPL7P16 7 56 chr3:132317576:+ chr3:132244259:- . NA TCGA-ZG-A9LN-01A-11R-A41O-07 EYA2-PI3 3 13 chr20:46894987:+ chr20:45175861:+ . NA TCGA-ZG-A9LN-01A-11R-A41O-07 BCL2L12-FLT3LG 3 7 chr19:49670488:+ chr19:49486015:+ FRAMESHIFT NA TCGA-ZG-A9LN-01A-11R-A41O-07 ERVK3-1-ZSCAN4 2 6 chr19:58306216:+ chr19:57676041:+ . NA TCGA-ZG-A9LN-01A-11R-A41O-07 PELP1-YBX2 1 10 chr17:4703863:- chr17:7293538:- FRAMESHIFT NA TCGA-ZG-A9LN-01A-11R-A41O-07 NANS-WNK2 1 9 chr9:98060997:+ chr9:93256948:+ INFRAME NA TCGA-ZG-A9LN-01A-11R-A41O-07 EFL1-CACNA2D3 1 3 chr15:82252691:- chr3:54752599:+ FRAMESHIFT NA TCGA-ZG-A9LU-01A-11R-A41O-07 RREB1-WRAP53 1 9 chr6:7108702:+ chr17:7688648:+ . NA TCGA-ZG-A9LY-01A-11R-A41O-07 ATF6-VCL 16 20 chr1:161766442:+ chr10:74094271:+ FRAMESHIFT NA TCGA-ZG-A9LY-01A-11R-A41O-07 CAB39L-FNDC3A 4 24 chr13:49401133:- chr13:49172043:+ . NA TCGA-ZG-A9LY-01A-11R-A41O-07 VCL-ATF6 5 5 chr10:74095855:+ chr1:161778244:+ FRAMESHIFT NA TCGA-ZG-A9LY-01A-11R-A41O-07 ELK4-VCL 4 7 chr1:205623676:- chr10:74095656:+ FRAMESHIFT NA TCGA-ZG-A9LY-01A-11R-A41O-07 STAU2-C8orf89 1 17 chr8:73738284:- chr8:73241605:- FRAMESHIFT NA TCGA-ZG-A9LY-01A-11R-A41O-07 ATF6-VMP1 1 11 chr1:161778320:+ chr17:59707527:+ . NA TCGA-ZG-A9LZ-01A-11R-A41O-07 TMPRSS2-ERG 87 79 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-ZG-A9LZ-01A-11R-A41O-07 LINC-PINT-DEPDC1B 57 133 chr7:131052425:- chr5:60605856:- . NA TCGA-ZG-A9LZ-01A-11R-A41O-07 SHQ1-PSMB7 29 182 chr3:72848197:- chr9:124405431:- . Likely Oncogenic NA TCGA-ZG-A9LZ-01A-11R-A41O-07 CIR1-SCRN3 12 43 chr2:174395551:- chr2:174399922:+ INFRAME NA TCGA-ZG-A9LZ-01A-11R-A41O-07 URI1-PEPD 3 28 chr19:29971227:+ chr19:33413643:- INFRAME NA TCGA-ZG-A9LZ-01A-11R-A41O-07 PHF21A-ACSL6 5 9 chr11:46076754:- chr5:131973400:- INFRAME NA TCGA-ZG-A9LZ-01A-11R-A41O-07 TNFAIP8-CCNB1IP1 1 12 chr5:119268907:+ chr14:20329373:- . NA TCGA-ZG-A9LZ-01A-11R-A41O-07 ZMYND8-RNF43 1 11 chr20:47347856:- chr17:58371033:- FRAMESHIFT Likely Oncogenic NA TCGA-ZG-A9LZ-01A-11R-A41O-07 PPA2-SORCS2 1 10 chr4:105456681:- chr4:7396288:+ INFRAME NA TCGA-ZG-A9LZ-01A-11R-A41O-07 MIER3-ABCC12 2 5 chr5:56933247:- chr16:48096932:- INFRAME NA TCGA-ZG-A9LZ-01A-11R-A41O-07 MYCBP2-TAF6L 1 3 chr13:77326474:- chr11:62782113:+ FRAMESHIFT NA TCGA-ZG-A9M4-01A-11R-A41O-07 CXADR-HERC1 4 12 chr21:17565611:+ chr15:63616682:- INFRAME NA TCGA-ZG-A9M4-01A-11R-A41O-07 ZCCHC14-IMPA2 3 7 chr16:87460008:- chr18:11999054:+ FRAMESHIFT NA TCGA-ZG-A9M4-01A-11R-A41O-07 LDLRAD4-CD226 2 9 chr18:13438384:+ chr18:69873246:- INFRAME NA TCGA-ZG-A9M4-01A-11R-A41O-07 PIK3R3-MYO18A 2 2 chr1:46077515:- chr17:29096915:- FRAMESHIFT Likely Oncogenic NA TCGA-ZG-A9M4-01A-11R-A41O-07 JAK1-PDE4B 1 2 chr1:64966333:- chr1:65913245:+ . Likely Oncogenic NA TCGA-ZG-A9MC-01A-31R-A41O-07 SP3-SLC8A1 5 25 chr2:173954873:- chr2:40115629:- INFRAME NA TCGA-ZG-A9MC-01A-31R-A41O-07 TMPRSS2-ERG 7 10 chr21:41508081:- chr21:38584945:- . Oncogenic NA TCGA-ZG-A9N3-01A-11R-A41O-07 TTC6-POLR3A 12 14 chr14:37596008:+ chr10:78004888:- . NA TCGA-ZG-A9N3-01A-11R-A41O-07 GDE1-TIAL1 7 25 chr16:19517014:- chr10:119588248:- INFRAME NA TCGA-ZG-A9N3-01A-11R-A41O-07 TMPRSS2-ERG 8 6 chr21:41508081:- chr21:38445621:- . Oncogenic NA TCGA-ZG-A9N3-01A-11R-A41O-07 POLR3A-TTC6 6 10 chr10:78007702:- chr14:37841445:+ FRAMESHIFT NA TCGA-ZG-A9N3-01A-11R-A41O-07 ZNF789-RPL37A 2 16 chr7:99479787:+ chr2:216519332:+ FRAMESHIFT NA TCGA-ZG-A9N3-01A-11R-A41O-07 NDUFB1-PPP4R3A 1 2 chr14:92121642:- chr14:91475966:- FRAMESHIFT NA TCGA-ZG-A9N3-01A-11R-A41O-07 DSG2-TTR 1000 1000 chr18:31498295:+ chr18:31592895:+ . NA TCGA-ZG-A9ND-01A-11R-A41O-07 KIAA0825-ADGRV1 3 6 chr5:94582433:- chr5:90828944:+ . NA TCGA-ZG-A9ND-01A-11R-A41O-07 SLC2A13-FAM19A2 1 2 chr12:39830103:- chr12:61867426:- INFRAME NA TCGA-ZG-A9NI-01A-11R-A41O-07 CDK7-SH3BGR 5 9 chr5:69235453:+ chr21:39499823:+ INFRAME NA TCGA-ZG-A9NI-01A-11R-A41O-07 TMEFF2-RLIM 3 7 chr2:192179668:- chrX:74596000:- . NA TCGA-AF-2687-01A-02R-1736-07 CAB39-PSMD1 8 45 chr2:230760115:+ chr2:231138736:+ FRAMESHIFT NA TCGA-AF-2690-01A-02R-1736-07 MPP5-CEP128 5 16 chr14:67269783:+ chr14:80580423:- . NA TCGA-AF-2690-01A-02R-1736-07 UBE4A-INSC 2 9 chr11:118381523:+ chr11:15175741:+ INFRAME NA TCGA-AF-2693-01A-02R-1736-07 PTPRF-DHRS4 13 34 chr1:43598913:+ chr14:23959902:+ INFRAME NA TCGA-AF-2693-01A-02R-1736-07 LRCH1-NUDT15 9 7 chr13:46553703:+ chr13:48040920:+ FRAMESHIFT NA TCGA-AF-4110-01A-02R-1736-07 MED13L-COX6A1 3 11 chr12:116237468:- chr12:120438379:+ INFRAME NA TCGA-AF-6655-01A-11R-1830-07 NPLOC4-ALYREF 2 12 chr17:81622166:- chr17:81888145:- FRAMESHIFT NA TCGA-AF-6655-01A-11R-1830-07 FGD4-CNTN5 1 5 chr12:32502338:+ chr11:99556145:+ . NA TCGA-AF-A56L-01A-31R-A39D-07 TNS4-FBXL20 91 278 chr17:40501534:- chr17:39343241:- . NA TCGA-AF-A56L-01A-31R-A39D-07 FBXL20-GRB7 62 275 chr17:39402173:- chr17:39742252:+ FRAMESHIFT NA TCGA-AF-A56L-01A-31R-A39D-07 TOP2A-IKZF3 45 239 chr17:40411109:- chr17:39766493:- FRAMESHIFT NA TCGA-AF-A56L-01A-31R-A39D-07 GRB7-CDK12 29 177 chr17:39746202:+ chr17:39544249:+ FRAMESHIFT Likely Oncogenic NA TCGA-AF-A56L-01A-31R-A39D-07 CPNE1-MROH8 24 63 chr20:35664760:- chr20:37147909:- . NA TCGA-AF-A56L-01A-31R-A39D-07 RBM12-MROH8 24 63 chr20:35664760:- chr20:37147909:- . NA TCGA-AF-A56L-01A-31R-A39D-07 CDK12-KRTAP4-1 17 46 chr17:39526316:+ chr17:41185321:- . Likely Oncogenic NA TCGA-AF-A56L-01A-31R-A39D-07 TBC1D16-GOSR2 1 45 chr17:80010160:- chr17:46929520:+ INFRAME NA TCGA-AF-A56L-01A-31R-A39D-07 WIPF2-CACNB1 5 20 chr17:40219492:+ chr17:39187601:- . NA TCGA-AF-A56L-01A-31R-A39D-07 SMPD3-ATP6V0D1 5 14 chr16:68363496:- chr16:67439351:- FRAMESHIFT NA TCGA-AG-3731-01A-11R-1736-07 GPAA1-GRINA 74 133 chr8:144084330:+ chr8:143991200:+ . NA TCGA-AG-3731-01A-11R-1736-07 LGALS3-SOCS4 33 230 chr14:55142749:+ chr14:55048796:+ . NA TCGA-AG-3731-01A-11R-1736-07 TBL1XR1-STAT3 38 139 chr3:177197121:- chr17:42348539:- . NA TCGA-AG-3731-01A-11R-1736-07 SMAD6-FAM96A 45 110 chr15:66716498:+ chr15:64081151:- INFRAME NA TCGA-AG-3731-01A-11R-1736-07 MRPL37-SLC52A1 11 47 chr1:54205410:+ chr17:5033169:- FRAMESHIFT NA TCGA-AG-3731-01A-11R-1736-07 KMT5B-STXBP1 14 23 chr11:68213477:- chr9:127651603:+ . NA TCGA-AG-3731-01A-11R-1736-07 FAM222B-STXBP4 14 21 chr17:28812209:- chr17:54999345:+ . NA TCGA-AG-3731-01A-11R-1736-07 SSH1-SVOP 10 32 chr12:108852638:- chr12:108938955:- FRAMESHIFT NA TCGA-AG-3731-01A-11R-1736-07 CAMTA2-LCK 12 16 chr17:4987593:- chr1:32279671:+ INFRAME NA TCGA-AG-3731-01A-11R-1736-07 SAE1-GRIN2D 7 31 chr19:47131028:+ chr19:48441769:+ INFRAME NA TCGA-AG-3731-01A-11R-1736-07 PAPSS2-SFRP5 2 14 chr10:87745231:+ chr10:97769745:- FRAMESHIFT NA TCGA-AG-3731-01A-11R-1736-07 NIPBL-ARNTL2 2 7 chr5:36972041:+ chr12:27368262:+ INFRAME NA TCGA-AG-3731-01A-11R-1736-07 POP1-ERICH5 1 9 chr8:98136954:+ chr8:98089076:+ FRAMESHIFT NA TCGA-AG-3731-01A-11R-1736-07 OSBPL3-NPVF 1000 1000 chr7:24979886:- chr7:25228357:- . NA TCGA-AG-3732-01A-11R-1660-07 PLEKHG6-TMBIM1 2 35 chr12:6319108:+ chr2:218282181:- . NA TCGA-AG-3732-01A-11R-1660-07 CDR2L-HID1 3 13 chr17:74988122:+ chr17:74964632:- FRAMESHIFT NA TCGA-AG-3732-01A-11R-1660-07 TP53I13-CEP112 3 11 chr17:29572057:+ chr17:66177020:- FRAMESHIFT NA TCGA-AG-3732-01A-11R-1660-07 PVT1-CACNA2D2 3 8 chr8:127796008:+ chr3:50384337:- . NA TCGA-AG-3732-01A-11R-1660-07 MIR1204-CACNA2D2 3 4 chr8:127796008:+ chr3:50384337:- . NA TCGA-AG-3742-01A-11R-1660-07 PIGT-SRSF6 99 374 chr20:45419395:+ chr20:43463344:+ . NA TCGA-AG-3902-01A-01R-A32Z-07 MIEN1-TEX2 4 24 chr17:39730194:- chr17:64160933:- INFRAME NA TCGA-AG-3902-01A-01R-A32Z-07 NFE2L1-FBXL20 3 3 chr17:48048462:+ chr17:39343241:- . NA TCGA-AG-3902-01A-01R-A32Z-07 RIC1-KANK1 2 7 chr9:5629453:+ chr9:676890:+ . NA TCGA-AG-3902-01A-01R-A32Z-07 ACACA-MED1 1 8 chr17:37358999:- chr17:39432016:- . NA TCGA-AG-4021-01A-01R-1736-07 TOMM6-GCLC 6 47 chr6:41789336:+ chr6:53564889:- . NA TCGA-AG-4021-01A-01R-1736-07 TRIM33-BCAR3 7 15 chr1:114510551:- chr1:93706142:- . NA TCGA-AH-6544-01A-11R-1830-07 GIGYF2-C6orf52 11 130 chr2:232796221:+ chr6:10672636:- INFRAME NA TCGA-AH-6643-01A-11R-1830-07 SMARCE1-RARA 168 733 chr17:40635931:- chr17:40355263:+ INFRAME NA TCGA-AH-6643-01A-11R-1830-07 FANCI-CRAT37 1 6 chr15:89295094:+ chr15:91473221:+ . NA TCGA-AH-6644-01A-21R-1830-07 INTS9-CASC16 3 33 chr8:28812327:- chr16:52591067:- . NA TCGA-AH-6644-01A-21R-1830-07 SLC9A1-PEX10 2 2 chr1:27153983:- chr1:2410451:- INFRAME NA TCGA-AH-6903-01A-11R-1928-07 LRP4-CFL1 1 2 chr11:46918328:- chr11:65856242:- FRAMESHIFT NA TCGA-CI-6619-01B-11R-1830-07 CUL4A-TFDP1 1 5 chr13:113210088:+ chr13:113610996:+ INFRAME NA TCGA-CI-6619-01B-11R-1830-07 IGF2BP1-BAIAP2 1 4 chr17:49031973:+ chr17:81099928:+ FRAMESHIFT NA TCGA-CI-6621-01A-11R-1830-07 VKORC1L1-ACHE 33 46 chr7:65873565:+ chr7:100891338:- INFRAME NA TCGA-CI-6621-01A-11R-1830-07 DTX2P1-SRRT 3 20 chr7:76978876:+ chr7:100886247:+ . NA TCGA-CI-6621-01A-11R-1830-07 SPRED1-AP3B2 2 5 chr15:38299547:+ chr15:82689453:- FRAMESHIFT NA TCGA-CI-6621-01A-11R-1830-07 DTX2-SRRT 1000 1000 chr7:76480777:+ chr7:100886247:+ FRAMESHIFT NA TCGA-CI-6622-01A-11R-1830-07 DPEP1-TCF25 4 10 chr16:89630514:+ chr16:89910591:+ INFRAME NA TCGA-CI-6622-01A-11R-1830-07 FAM193B-SGCD 1 5 chr5:177531282:- chr5:156508601:+ INFRAME NA TCGA-CI-6622-01A-11R-1830-07 MICALL2-UCKL1 1 1 chr7:1446713:- chr20:63941208:- INFRAME NA TCGA-CI-6624-01C-11R-1830-07 STN1-TM9SF3 2 5 chr10:103917462:- chr10:96576829:- FRAMESHIFT NA TCGA-CI-6624-01C-11R-1830-07 USP54-DNAJB12 1 6 chr10:73571421:- chr10:72345127:- FRAMESHIFT NA TCGA-CL-4957-01A-01R-1736-07 DHX30-FBXW12 3 18 chr3:47810711:+ chr3:48378317:+ FRAMESHIFT NA TCGA-CL-5918-01A-11R-1660-07 POLK-SKIV2L2 1 6 chr5:75587058:+ chr5:55340010:+ INFRAME NA TCGA-DC-4745-01A-01R-A32Z-07 TTC3-CBS 4 8 chr21:37073473:+ chr21:43073341:- . NA TCGA-DC-4745-01A-01R-A32Z-07 APP-TSPEAR 4 5 chr21:25954590:- chr21:44568005:- INFRAME NA TCGA-DC-4745-01A-01R-A32Z-07 SSPN-PKP2 1 8 chr12:26122152:+ chr12:32796298:- . NA TCGA-DC-4749-01A-01R-1736-07 PLCB1-PSMF1 1 3 chr20:8150371:+ chr20:1125498:+ INFRAME NA TCGA-DC-4749-01A-01R-1736-07 TMX4-PKIG 1 3 chr20:8010200:- chr20:44614534:+ . NA TCGA-DC-5337-01A-01R-1660-07 EIF4G3-CFAP74 6 16 chr1:21050866:- chr1:1947054:- FRAMESHIFT NA TCGA-DC-5337-01A-01R-1660-07 PLA2G6-BAIAP2L2 1000 1000 chr22:38169218:- chr22:38087264:- INFRAME NA TCGA-DC-6154-01A-31R-1928-07 PAN3-LATS2 11 17 chr13:28139087:+ chr13:20983806:- FRAMESHIFT Likely Oncogenic NA TCGA-DC-6154-01A-31R-1928-07 PAN3-KATNAL1 7 8 chr13:28177935:+ chr13:30283791:- . NA TCGA-DC-6154-01A-31R-1928-07 KMT2C-LMTK3 3 10 chr7:152148033:- chr19:48494109:- INFRAME Likely Oncogenic NA TCGA-DC-6157-01A-11R-1660-07 NAPB-CST9L 3 16 chr20:23394922:- chr20:23566087:- INFRAME NA TCGA-DC-6158-01A-11R-1660-07 C2CD3-VPS37C 4 21 chr11:74042054:- chr11:61138835:- . NA TCGA-DC-6160-01A-11R-1660-07 KCNQ1-MMP26 4 9 chr11:2588854:+ chr11:4767270:+ . NA TCGA-DC-6683-01A-11R-1830-07 PATJ-MAP2K5 8 41 chr1:61808530:+ chr15:67748231:+ INFRAME NA TCGA-DT-5265-01A-21R-1830-07 TPCN2-SHANK2-AS2 2 18 chr11:69063967:+ chr11:70647341:+ . NA TCGA-DT-5265-01A-21R-1830-07 SHANK2-SYT7 4 3 chr11:71224697:- chr11:61556207:- . NA TCGA-DY-A0XA-01A-11R-A155-07 POLB-HOOK3 1 5 chr8:42345019:+ chr8:42906173:+ INFRAME NA TCGA-DY-A1DD-01A-21R-A155-07 GMEB2-RALY 9 77 chr20:63602965:- chr20:34072066:+ . NA TCGA-DY-A1DD-01A-21R-A155-07 RAD52-KDM5A 4 9 chr12:949602:- chr12:356537:- . NA TCGA-DY-A1DF-01A-11R-A155-07 ZNF714-STAP2 15 53 chr19:21084069:+ chr19:4338944:- . NA TCGA-DY-A1DF-01A-11R-A155-07 PRR12-SYMPK 7 24 chr19:49616219:+ chr19:45854507:- . NA TCGA-EF-5830-01A-01R-1660-07 RASSF3-TBK1 8 39 chr12:64610743:+ chr12:64495483:+ INFRAME NA TCGA-EF-5830-01A-01R-1660-07 MAL2-B2M 3 8 chr8:119208604:+ chr15:44715423:+ FRAMESHIFT Likely Oncogenic NA TCGA-EI-6506-01A-11R-1736-07 YEATS4-CPSF6 10 39 chr12:69370975:+ chr12:69269512:+ FRAMESHIFT NA TCGA-EI-6506-01A-11R-1736-07 WDR55-ANKHD1 3 5 chr5:140672946:+ chr5:140504819:+ . NA TCGA-EI-6506-01A-11R-1736-07 NUAK2-DSTYK 1 8 chr1:205321398:- chr1:205169832:- INFRAME NA TCGA-EI-6506-01A-11R-1736-07 ZFYVE9-BTF3L4 1 2 chr1:52142403:+ chr1:52064825:+ . NA TCGA-EI-6508-01A-11R-1736-07 HNMT-SPOPL 2 3 chr2:137970217:+ chr2:138559022:+ FRAMESHIFT NA TCGA-EI-6509-01A-11R-1736-07 SOCS7-MIEN1 278 1295 chr17:38368050:+ chr17:39730291:- FRAMESHIFT NA TCGA-EI-6509-01A-11R-1736-07 SRCIN1-LASP1 17 380 chr17:38605633:- chr17:38914325:+ . NA TCGA-EI-6509-01A-11R-1736-07 MRPL45-ARHGAP23 46 177 chr17:38299468:+ chr17:38458102:+ FRAMESHIFT NA TCGA-EI-6509-01A-11R-1736-07 NFIA-ZNF253 1 8 chr1:61088680:+ chr19:19891474:+ INFRAME NA TCGA-EI-6510-01A-11R-1736-07 RHOA-EMC3 211 639 chr3:49368428:- chr3:9969801:- INFRAME NA TCGA-EI-6510-01A-11R-1736-07 EMC3-RHOA 157 403 chr3:9970582:- chr3:49362626:- INFRAME NA TCGA-EI-6510-01A-11R-1736-07 CD2AP-SLC25A13 37 95 chr6:47533755:+ chr7:96171524:- INFRAME NA TCGA-EI-6510-01A-11R-1736-07 SLC25A13-CD2AP 2 17 chr7:96184277:- chr6:47544606:+ INFRAME NA TCGA-EI-6511-01A-11R-1736-07 MAP7D2-SH3KBP1 3 17 chrX:20116750:- chrX:19706984:- INFRAME NA TCGA-EI-6514-01A-11R-1736-07 RALGAPA2-BTBD3 1 12 chr20:20676236:- chr20:11918334:+ FRAMESHIFT NA TCGA-EI-6883-01A-31R-1928-07 MOV10-SYCP1 1 5 chr1:112690098:+ chr1:114895448:+ FRAMESHIFT NA TCGA-EI-6884-01A-11R-1928-07 LATS1-NUP43 7 20 chr6:149717849:- chr6:149731735:- FRAMESHIFT Likely Oncogenic NA TCGA-EI-6884-01A-11R-1928-07 CCAR2-PDLIM2 3 11 chr8:22608065:+ chr8:22584821:+ INFRAME NA TCGA-EI-6885-01A-11R-1928-07 GOLIM4-PRDX1 96 437 chr3:168041392:- chr1:45511414:- FRAMESHIFT NA TCGA-EI-6885-01A-11R-1928-07 TNKS-MSRA 21 103 chr8:9615677:+ chr8:10207833:+ INFRAME NA TCGA-EI-7002-01A-11R-1928-07 PTPRK-IL20RA 18 82 chr6:128520259:- chr6:137017103:- INFRAME NA TCGA-EI-7002-01A-11R-1928-07 LHFPL2-PTPRK 8 62 chr5:78509784:- chr6:128089992:- INFRAME NA TCGA-EI-7002-01A-11R-1928-07 OPA3-TNPO1 2 6 chr19:45584623:- chr5:72848385:+ FRAMESHIFT NA TCGA-EI-7004-01A-11R-1928-07 MYH9-SORCS1 6 16 chr22:36305033:- chr10:106730114:- FRAMESHIFT NA TCGA-F5-6465-01A-11R-1736-07 FAM122B-UCKL1 2 4 chrX:134797121:- chr20:63941208:- . NA TCGA-F5-6465-01A-11R-1736-07 LRCH4-ACOT12 1 5 chr7:100581777:- chr5:81360038:- FRAMESHIFT NA TCGA-F5-6465-01A-11R-1736-07 RBCK1-ANO9 1 3 chr20:419731:+ chr11:428826:- INFRAME NA TCGA-F5-6571-01A-12R-1830-07 CDK8-USP12-AS2 6 32 chr13:26254769:+ chr13:27182834:+ . NA TCGA-F5-6571-01A-12R-1830-07 SPATA13-TPTE2P1 4 13 chr13:24251862:+ chr13:24951488:- . NA TCGA-F5-6810-01A-11R-1830-07 C21orf58-IFNGR2 5 26 chr21:46311456:- chr21:33432177:+ FRAMESHIFT NA TCGA-F5-6810-01A-11R-1830-07 TCEANC2-MICU1 3 27 chr1:54068897:+ chr10:72477256:- INFRAME NA TCGA-F5-6810-01A-11R-1830-07 NOTCH3-SPECC1 4 13 chr19:15186878:- chr17:20204333:+ INFRAME NA TCGA-F5-6811-01A-11R-1830-07 UNKL-STX1B 2 7 chr16:1390632:- chr16:31001603:- INFRAME NA TCGA-F5-6813-01A-11R-1830-07 STAU2-PLEKHF2 5 11 chr8:73673107:- chr8:95154031:+ . NA TCGA-F5-6814-01A-31R-1928-07 ARHGEF1-RPS19 12 81 chr19:41893303:+ chr19:41869031:+ INFRAME NA TCGA-F5-6814-01A-31R-1928-07 KPNA6-TMEM39B 11 38 chr1:32108134:+ chr1:32100442:+ FRAMESHIFT NA TCGA-F5-6814-01A-31R-1928-07 RNF130-MGAT4B 9 26 chr5:180040453:- chr5:179799636:- INFRAME NA TCGA-F5-6861-01A-11R-1928-07 DPEP1-TCF25 1 4 chr16:89613719:+ chr16:89910591:+ . NA TCGA-F5-6861-01A-11R-1928-07 MICALL2-UCKL1 1 3 chr7:1446713:- chr20:63941208:- INFRAME NA TCGA-F5-6863-01A-11R-1928-07 NUDT4-MRPL42 1 2 chr12:93398855:+ chr12:93501176:+ FRAMESHIFT NA TCGA-F5-6863-01A-11R-1928-07 SV2C-NMU 1 2 chr5:76209887:+ chr4:55609179:- FRAMESHIFT NA TCGA-F5-6864-01A-11R-1928-07 CHMP4B-FER1L4 13 52 chr20:33811658:+ chr20:35579114:- . NA TCGA-F5-6864-01A-11R-1928-07 CAMK2D-TLL2 3 22 chr4:113500463:- chr10:96432962:- INFRAME NA TCGA-F5-6864-01A-11R-1928-07 PPP2R5E-STRN3 1 6 chr14:63539529:- chr14:30956242:- FRAMESHIFT NA TCGA-G5-6641-01A-11R-A32Z-07 PLCB4-RASA3 3 6 chr20:9444243:+ chr13:113996739:- INFRAME NA TCGA-3B-A9HI-01A-11R-A38C-07 TMEM94-LRRC52 8 17 chr17:75471929:+ chr1:165563505:+ FRAMESHIFT NA TCGA-3B-A9HI-01A-11R-A38C-07 PARVA-USP47 1 2 chr11:12377783:+ chr11:11952741:+ INFRAME NA TCGA-3B-A9HJ-01A-11R-A38C-07 RBM38-LSM7 17 67 chr20:57393333:+ chr19:2324196:- FRAMESHIFT NA TCGA-3B-A9HJ-01A-11R-A38C-07 FRS2-CDK4 3 23 chr12:69537983:+ chr12:57751736:- . NA TCGA-3B-A9HJ-01A-11R-A38C-07 FRS2-ADGRE1 2 22 chr12:69470530:+ chr19:6928145:+ . NA TCGA-3B-A9HJ-01A-11R-A38C-07 FRS2-FBRSL1 2 6 chr12:69470530:+ chr12:132548003:+ . NA TCGA-3B-A9HL-01A-11R-A38C-07 DCBLD1-CCT2 250 927 chr6:117503979:+ chr12:69592059:+ INFRAME NA TCGA-3B-A9HL-01A-11R-A38C-07 TDG-CDK17 43 157 chr12:103966060:+ chr12:96289287:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 SCN8A-ANO2 21 58 chr12:51663093:+ chr12:5647801:- INFRAME NA TCGA-3B-A9HL-01A-11R-A38C-07 FYN-CDK19 15 72 chr6:111872968:- chr6:110632161:- . NA TCGA-3B-A9HL-01A-11R-A38C-07 CLEC2B-MYRFL 17 53 chr12:9869205:- chr12:69952113:+ . NA TCGA-3B-A9HL-01A-11R-A38C-07 ST3GAL4-ZW10 13 33 chr11:126355842:+ chr11:113748420:- . NA TCGA-3B-A9HL-01A-11R-A38C-07 PPFIA2-GRIP1 9 35 chr12:81676791:- chr12:66432628:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 HMGA2-NELL2 7 26 chr12:65838569:+ chr12:44703854:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 NELL2-MUC21 6 19 chr12:44665484:- chr6:30986237:+ INFRAME NA TCGA-3B-A9HL-01A-11R-A38C-07 ATP2A2-COL2A1 6 10 chr12:110334143:+ chr12:47984599:- INFRAME NA TCGA-3B-A9HL-01A-11R-A38C-07 NDUFA12-NUP107 3 22 chr12:95002739:- chr12:68688962:+ FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 OSBPL8-CTDSP2 2 22 chr12:76559397:- chr12:57829596:- . NA TCGA-3B-A9HL-01A-11R-A38C-07 KIF21A-COPS7B 1 22 chr12:39319906:- chr2:231791733:+ FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 EYA4-MAP3K5 4 5 chr6:133241749:+ chr6:136705133:- . NA TCGA-3B-A9HL-01A-11R-A38C-07 IGF1R-MAP7 3 6 chr15:98708107:+ chr6:136421799:- INFRAME NA TCGA-3B-A9HL-01A-11R-A38C-07 GRIP1-TSPAN31 1 13 chr12:66394208:- chr12:57745745:+ FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 NEDD1-PPFIA2 2 9 chr12:96912817:+ chr12:81754223:- . NA TCGA-3B-A9HL-01A-11R-A38C-07 NDUFA12-ARMC2 1 7 chr12:94994170:- chr6:108928088:+ FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 MLLT1-CRLF1 1 5 chr19:6230570:- chr19:18599846:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 PDE7B-KIF21A 1 5 chr6:136151255:+ chr12:39332744:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 RAB3B-MYSM1 1 5 chr1:51933318:- chr1:58665631:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 TIGAR-ZNF827 1 4 chr12:4321303:+ chr4:145823525:- INFRAME NA TCGA-3B-A9HL-01A-11R-A38C-07 CAMSAP1-STAU2 1 3 chr9:135907000:- chr8:73617451:- FRAMESHIFT NA TCGA-3B-A9HL-01A-11R-A38C-07 NAV3-E2F7 1 2 chr12:78197401:+ chr12:77028138:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 COL6A1-RBM19 840 1732 chr21:45994229:+ chr12:113823321:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 MARCH6-NDUFA6 211 803 chr5:10353917:+ chr22:42087175:- INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 FRS2-AVIL 41 970 chr12:69537983:+ chr12:57799920:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 PSMC4-FRS2 103 285 chr19:39980717:+ chr12:69486202:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 ULK1-BCRP3 119 114 chr12:131895824:+ chr22:24653006:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 MAPKAPK5-CCDC38 31 115 chr12:111842769:+ chr12:95872460:- INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 SLC41A2-LIN7A 15 108 chr12:104958088:- chr12:80848322:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 TMTC3-RILPL1 23 58 chr12:88160851:+ chr12:123485805:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 DNAH10-LIN7A 16 56 chr12:123838689:+ chr12:80845939:- INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 SPATC1L-IGF1 12 43 chr21:46184356:- chr12:102419690:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 TTC28-EWSR1 8 33 chr22:28629552:- chr22:29298733:+ FRAMESHIFT Likely Oncogenic NA TCGA-3B-A9HO-01A-11R-A38C-07 GUCD1-SGSM1 11 17 chr22:24555615:- chr22:24806441:+ INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 CIT-LYZ 6 30 chr12:119822820:- chr12:69350108:+ INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 CDK4-PICSAR 5 27 chr12:57752175:- chr21:44999656:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 ULK1-TCTN1 8 15 chr12:131915421:+ chr12:110628767:+ INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 FAIM2-C12orf40 7 17 chr12:49887386:- chr12:39716756:+ FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 ATP2B1-C8orf34 4 26 chr12:89709219:- chr8:68708994:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 C12orf40-MTERF3 7 9 chr12:39754332:+ chr8:96258700:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 MTERF3-HSD17B6 7 9 chr8:96250906:- chr12:56773834:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 CPQ-KSR2 7 8 chr8:96645402:+ chr12:117860431:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 KSR2-CEP290 7 8 chr12:117761011:- chr12:88050433:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 FBXW8-ATP23 5 15 chr12:116928127:+ chr12:57951758:+ INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 ADAR-SUMO3 6 9 chr1:154627855:- chr21:44809118:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 DDR2-CHD1L 3 11 chr1:162655374:+ chr1:147252623:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 TMEM5-PTDSS1 3 11 chr12:63785072:+ chr8:96273299:+ INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 DAP-MTERF3 2 13 chr5:10761014:- chr8:96239685:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 RILPL1-CDK4 3 8 chr12:123484180:- chr12:57748617:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 ELK3-MPTX1 3 3 chr12:96223773:+ chr1:159276507:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 SGSM1-GAL3ST1 3 3 chr22:24859840:+ chr22:30557401:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 POLR3B-SLC35E3 1 10 chr12:106410960:+ chr12:68793288:+ . NA TCGA-3B-A9HO-01A-11R-A38C-07 SDC2-TMEM132D 1 10 chr8:96494331:+ chr12:129084702:- INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 SEMA5A-DAP 2 4 chr5:9054087:- chr5:10683571:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 ZNF641-MYRFL 1 8 chr12:48347252:- chr12:69855280:+ FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 CPQ-CORO1C 1 6 chr8:96645402:+ chr12:108701323:- . NA TCGA-3B-A9HO-01A-11R-A38C-07 TSFM-C8orf34 1 6 chr12:57787162:+ chr8:68815886:+ FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 COPS5-HVCN1 1 5 chr8:67045812:- chr12:110661448:- FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 CSTB-PDE9A 1 5 chr21:43776204:- chr21:42768188:+ INFRAME NA TCGA-3B-A9HO-01A-11R-A38C-07 RILPL1-SDSL 1 5 chr12:123484180:- chr12:113428420:+ FRAMESHIFT NA TCGA-3B-A9HO-01A-11R-A38C-07 TSFM-CPM 2 1 chr12:57793073:+ chr12:68871956:- INFRAME NA TCGA-3B-A9HR-01A-11R-A38C-07 RBM4B-FADD 29 89 chr11:66676668:- chr11:70206133:+ INFRAME NA TCGA-3B-A9HR-01A-11R-A38C-07 FNDC3A-LPAR6 7 90 chr13:49114731:+ chr13:48389812:- . NA TCGA-3B-A9HR-01A-11R-A38C-07 TP53-FAM196B 11 50 chr17:7687377:- chr5:169884816:- . Likely Oncogenic NA TCGA-3B-A9HR-01A-11R-A38C-07 NSD1-ARHGAP26 4 63 chr5:177212195:+ chr5:142907704:+ INFRAME Likely Oncogenic NA TCGA-3B-A9HR-01A-11R-A38C-07 MYH11-MYLK 1 36 chr16:15715164:- chr3:123664258:- INFRAME NA TCGA-3B-A9HR-01A-11R-A38C-07 MYLK-FLNA 1 25 chr3:123620207:- chrX:154350207:- INFRAME NA TCGA-3B-A9HR-01A-11R-A38C-07 PRUNE2-MYH11 1 4 chr9:76905928:- chr16:15704123:- FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 LRP1-DAZAP2 12 2740 chr12:57175926:+ chr12:51242467:+ FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 CTDSP2-TSPAN8 213 552 chr12:57846372:- chr12:71157787:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 ARHGEF18-ACACB 136 614 chr19:7395247:+ chr12:109197008:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 ACACA-GLIPR1L2 164 343 chr17:37330173:- chr12:75422904:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 LRP1-FAM19A2 62 214 chr12:57175705:+ chr12:61710417:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 NAP1L1-ELK3 34 133 chr12:76084567:- chr12:96223565:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 SPDL1-SCGB3A2 33 123 chr5:169583889:+ chr5:147881446:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 IFT81-INSR 27 99 chr12:110136860:+ chr19:7184637:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 HNRNPH1-INSR 14 92 chr5:179617984:- chr19:7184637:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 ANKLE2-MGAT1 18 70 chr12:132747832:- chr5:180793097:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 COG1-TK1 18 53 chr17:73201313:+ chr17:78182686:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 BEST3-CCT2 7 70 chr12:69643689:- chr12:69601295:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 USP16-ACSS3 10 47 chr21:29024777:+ chr12:81151844:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 GLIPR1-CDK17 6 43 chr12:75482079:+ chr12:96334865:- FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 SFXN1-LYZ 7 36 chr5:175492267:+ chr12:69352220:+ FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 PCSK5-DENND1A 2 47 chr9:76027037:+ chr9:123879021:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 ACACB-MARCH9 6 30 chr12:109237380:+ chr12:57756929:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 SLC35E3-L3MBTL3 4 35 chr12:68752190:+ chr6:130133452:+ FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 BACH1-OSBPL8 7 21 chr21:29329693:+ chr12:76358811:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 GFPT2-PPFIA2 3 32 chr5:180330700:- chr12:81353339:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 LAMA2-NUP107 4 25 chr6:129320655:+ chr12:68741813:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 ACSS3-METTL21B 5 16 chr12:81109704:+ chr12:57773017:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 MTFR2-GFPT2 4 14 chr6:136250264:- chr5:180338600:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 PEX3-SLC35F1 4 14 chr6:143474856:+ chr6:118314028:+ FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 TMEM167B-LYPLA1 3 18 chr1:109093021:+ chr8:54055133:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 ATP2C1-TMEM241 4 11 chr3:130941699:+ chr18:23309744:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 MGAT4C-METTL25 3 14 chr12:86838666:- chr12:82477281:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 MGAT4C-PPFIA2 3 12 chr12:86334065:- chr12:81263390:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 NEDD1-TMTC2 3 11 chr12:96920125:+ chr12:82895818:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 AGAP2-RAB21 4 6 chr12:57729639:- chr12:71785531:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 ZNF557-TCHP 3 9 chr19:7070653:+ chr12:109980905:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 CNOT6-ACSS3 1 16 chr5:180567242:+ chr12:81109560:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 TMTC3-OSBPL8 1 16 chr12:88176319:+ chr12:76358811:- FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 UNK-SPOP 1 15 chr17:75784984:+ chr17:49622876:- . Likely Oncogenic NA TCGA-3B-A9HS-01A-11R-A39D-07 LTA4H-LAMA2 2 6 chr12:96035361:- chr6:129250112:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 TK1-ENDOV 1 10 chr17:78185055:- chr17:80436133:+ FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 TAF13-LYPLA1 2 5 chr1:109074987:- chr8:54055133:- INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 BEST3-PTPRR 2 4 chr12:69671428:- chr12:70764778:- FRAMESHIFT NA TCGA-3B-A9HS-01A-11R-A39D-07 CNOT6-TSPAN8 1 8 chr5:180550117:+ chr12:71157787:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 SPDL1-ANXA6 1 6 chr5:169583889:+ chr5:151101507:- . NA TCGA-3B-A9HS-01A-11R-A39D-07 CTPS1-FOXO6 1 2 chr1:41010254:+ chr1:41381616:+ . NA TCGA-3B-A9HS-01A-11R-A39D-07 SLIT3-PPARGC1B 1 1 chr5:169244705:- chr5:149845760:+ INFRAME NA TCGA-3B-A9HS-01A-11R-A39D-07 MDM1-INSR 1000 1000 chr12:68302620:- chr19:7152927:- INFRAME NA TCGA-3B-A9HU-01A-11R-A39D-07 GALNT10-SAP30L 1 10 chr5:154218149:+ chr5:154453402:+ . NA TCGA-3B-A9HV-01A-11R-A39D-07 COL4A1-GABBR2 26 79 chr13:110187204:- chr9:98309784:- . NA TCGA-3B-A9HV-01A-11R-A39D-07 ETV1-CACNA2D1 19 80 chr7:13977427:- chr7:82066524:- INFRAME Likely Oncogenic NA TCGA-3B-A9HV-01A-11R-A39D-07 RNF165-PHLPP1 10 42 chr18:46334335:+ chr18:62941718:+ FRAMESHIFT NA TCGA-3B-A9HV-01A-11R-A39D-07 ZNF462-ZBED2 3 21 chr9:106939107:+ chr3:111595066:- . NA TCGA-3B-A9HV-01A-11R-A39D-07 KBTBD11-MYOM2 5 10 chr8:1973935:+ chr8:2115960:+ . NA TCGA-3B-A9HV-01A-11R-A39D-07 C9orf3-ZNF462 2 18 chr9:95060810:+ chr9:106923354:+ . NA TCGA-3B-A9HV-01A-11R-A39D-07 DOCK3-CSNK1A1 3 13 chr3:50778758:+ chr5:149525171:- FRAMESHIFT NA TCGA-3B-A9HV-01A-11R-A39D-07 TPM2-CNTROB 3 5 chr9:35685064:- chr17:7949385:+ INFRAME NA TCGA-3B-A9HV-01A-11R-A39D-07 ERCC6L2-CDC14B 3 4 chr9:96004701:+ chr9:96541892:- INFRAME NA TCGA-3B-A9HV-01A-11R-A39D-07 TMEM35A-SLC25A43 1 5 chrX:101079122:+ chrX:119452009:+ INFRAME NA TCGA-3B-A9HX-01A-11R-A39D-07 LSM4-OVOL3 20 487 chr19:18323018:- chr19:36111369:+ FRAMESHIFT NA TCGA-3B-A9HX-01A-11R-A39D-07 PIAS4-ZNF787 49 137 chr19:4033580:+ chr19:56103227:- . NA TCGA-3B-A9HX-01A-11R-A39D-07 SIN3B-TBC1D17 29 215 chr19:16876578:+ chr19:49880279:+ INFRAME NA TCGA-3B-A9HX-01A-11R-A39D-07 TPM4-IGFL2 33 103 chr19:16067738:+ chr19:46160415:+ FRAMESHIFT NA TCGA-3B-A9HX-01A-11R-A39D-07 FHL2-UNC93B5 9 9 chr2:105386361:- chr11:67716005:- . NA TCGA-3B-A9HX-01A-11R-A39D-07 ZC3H4-KANK3 7 14 chr19:47110895:- chr19:8325096:- . NA TCGA-3B-A9HX-01A-11R-A39D-07 HNRNPM-ZNF788 1 32 chr19:8455574:+ chr19:12111246:+ INFRAME NA TCGA-3B-A9HX-01A-11R-A39D-07 TGFB1-CCDC97 5 16 chr19:41332128:- chr19:41316384:+ FRAMESHIFT NA TCGA-3B-A9HX-01A-11R-A39D-07 ZNF431-SIGLEC6 5 14 chr19:21143643:+ chr19:51531519:- FRAMESHIFT NA TCGA-3B-A9HX-01A-11R-A39D-07 ZNF569-ZNF497 5 14 chr19:37444907:- chr19:58358585:- . NA TCGA-3B-A9HX-01A-11R-A39D-07 ZNF416-ACTN4 2 16 chr19:57578057:- chr19:38700600:+ INFRAME NA TCGA-3B-A9HX-01A-11R-A39D-07 ZNF17-ARHGAP35 1 5 chr19:57411406:+ chr19:46987989:+ FRAMESHIFT NA TCGA-3B-A9HX-01A-11R-A39D-07 ZNF799-SIGLECL1 1 4 chr19:12401068:- chr19:51263883:+ . NA TCGA-3B-A9HY-01A-11R-A39D-07 SORBS1-FAM135B 44 126 chr10:95346406:- chr8:138243068:- INFRAME NA TCGA-3B-A9HY-01A-11R-A39D-07 HNRNPL-MAP4K1 7 8 chr19:38852296:- chr19:38597384:- . NA TCGA-3B-A9HY-01A-11R-A39D-07 FAM20B-RALGPS2 2 1 chr1:179026098:+ chr1:178889642:+ . NA TCGA-3B-A9HZ-01A-11R-A39D-07 RNF217-RSPO3 3 55 chr6:124963426:+ chr6:127195823:+ INFRAME NA TCGA-3B-A9HZ-01A-11R-A39D-07 REV3L-C4B 2 11 chr6:111405470:- chr6:32034514:+ INFRAME NA TCGA-3B-A9I1-01A-11R-A39D-07 INPP5A-TUBGCP2 1 5 chr10:132607956:+ chr10:133302980:- . NA TCGA-3B-A9I3-01A-11R-A39D-07 FAM126A-STEAP1B 36 252 chr7:22976210:- chr7:22419836:- FRAMESHIFT NA TCGA-3B-A9I3-01A-11R-A39D-07 PPP1R18-TNXB 7 20 chr6:30684408:- chr6:32053711:- FRAMESHIFT NA TCGA-3B-A9I3-01A-11R-A39D-07 CHIC1-HDAC8 2 20 chrX:73584572:+ chrX:72351838:- INFRAME NA TCGA-3R-A8YX-01A-11R-A37L-07 DDB1-SDHA 9 48 chr11:61313499:- chr5:235144:+ INFRAME NA TCGA-3R-A8YX-01A-11R-A37L-07 CNOT2-SSH3 13 11 chr12:70243480:+ chr11:67307371:+ . NA TCGA-3R-A8YX-01A-11R-A37L-07 UVRAG-MS4A8 6 23 chr11:76007621:+ chr11:60703378:+ INFRAME NA TCGA-3R-A8YX-01A-11R-A37L-07 NEXN-PTGFR 6 14 chr1:77888759:+ chr1:78492672:+ . NA TCGA-3R-A8YX-01A-11R-A37L-07 ACSS3-AVIL 5 11 chr12:81078431:+ chr12:57811127:- INFRAME NA TCGA-3R-A8YX-01A-11R-A37L-07 CNOT2-CPM 1 4 chr12:70278274:+ chr12:68932840:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 YEATS4-NME7 53 434 chr12:69365884:+ chr1:169132817:- INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 RAP1B-DPT 55 258 chr12:68611043:+ chr1:168714346:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 GAS5-ACP6 16 270 chr1:173866528:- chr1:147631065:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 DENND1B-TSPAN31 10 126 chr1:197772868:- chr12:57746589:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 CPM-CCT2 16 96 chr12:68885792:- chr12:69592976:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 UEVLD-PRMT3 15 100 chr11:18588613:- chr11:20452130:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 EIF3M-UEVLD 6 128 chr11:32596047:+ chr11:18570377:- INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 LRIG3-SLC16A7 6 58 chr12:58874055:- chr12:59771219:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 CTDSP2-RALB 13 26 chr12:57846372:- chr2:120278618:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 MDM1-RBMS2 8 37 chr12:68332228:- chr12:56581184:+ FRAMESHIFT NA TCGA-DX-A1KU-01A-32R-A24X-07 UCHL5-C1orf112 4 48 chr1:193021097:- chr1:169849500:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 PRRG4-ZNF215 4 37 chr11:32840239:+ chr11:6932094:+ . NA TCGA-DX-A1KU-01A-32R-A24X-07 MARCH6-GALNT18 8 18 chr5:10411537:+ chr11:11379264:- FRAMESHIFT NA TCGA-DX-A1KU-01A-32R-A24X-07 ZBTB37-FSD1L 8 18 chr1:173888764:+ chr9:105549091:+ . NA TCGA-DX-A1KU-01A-32R-A24X-07 ASPM-PIGC 4 31 chr1:197146141:- chr1:172415374:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 MICAL2-NELL1 5 25 chr11:12162419:+ chr11:21370853:+ FRAMESHIFT NA TCGA-DX-A1KU-01A-32R-A24X-07 CFH-ASPM 4 25 chr1:196726940:+ chr1:197142429:- INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 DLGAP1-METTL4 3 11 chr18:3814059:- chr18:2567654:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 DCAF8-CD1C 2 13 chr1:160237135:- chr1:158291134:+ FRAMESHIFT NA TCGA-DX-A1KU-01A-32R-A24X-07 GALNT18-PARVA 2 12 chr11:11621359:- chr11:12527849:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 MDM2-DDR2 3 7 chr12:68820374:+ chr1:162655211:+ . NA TCGA-DX-A1KU-01A-32R-A24X-07 SUCO-GLIPR1L1 1 13 chr1:172585948:+ chr12:75363102:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 GNS-SLC16A7 2 5 chr12:64752698:- chr12:59779423:+ FRAMESHIFT NA TCGA-DX-A1KU-01A-32R-A24X-07 ATP1B1-IL26 1 8 chr1:169111498:+ chr12:68225283:- FRAMESHIFT NA TCGA-DX-A1KU-01A-32R-A24X-07 NME7-CCDC181 1 8 chr1:169367708:- chr1:169424950:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 MDM1-RAP1B 2 2 chr12:68313443:- chr12:68650400:+ INFRAME NA TCGA-DX-A1KU-01A-32R-A24X-07 USP15-TPH2 1 6 chr12:62306058:+ chr12:72105648:+ . NA TCGA-DX-A1KU-01A-32R-A24X-07 NCOA3-PTPRT 1 4 chr20:47502019:+ chr20:42472562:- . Likely Oncogenic NA TCGA-DX-A1KU-01A-32R-A24X-07 PARVA-HBG2 1 4 chr11:12377783:+ chr11:5345899:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 SERGEF-HBE1 1 4 chr11:17988597:- chr11:5270156:- . NA TCGA-DX-A1KU-01A-32R-A24X-07 R3HDM2-RAP1B 1000 1000 chr12:57430720:- chr12:68650400:+ . NA TCGA-DX-A1KW-01A-22R-A24X-07 PTPN11-EPYC 518 1140 chr12:112456063:+ chr12:90978262:- INFRAME NA TCGA-DX-A1KW-01A-22R-A24X-07 PWP1-CCDC63 228 546 chr12:107704747:+ chr12:110893076:+ INFRAME NA TCGA-DX-A1KW-01A-22R-A24X-07 GNS-NUP107 97 337 chr12:64737004:- chr12:68709238:+ INFRAME NA TCGA-DX-A1KW-01A-22R-A24X-07 HECTD4-AMDHD1 43 108 chr12:112381952:- chr12:95966348:+ INFRAME NA TCGA-DX-A1KW-01A-22R-A24X-07 CAMKK2-DIP2B 14 70 chr12:121296638:- chr12:50625976:+ . NA TCGA-DX-A1KW-01A-22R-A24X-07 CHPT1-ATXN2 10 82 chr12:101698134:+ chr12:111510582:- INFRAME NA TCGA-DX-A1KW-01A-22R-A24X-07 KRR1-CDK17 8 24 chr12:75499813:- chr12:96313454:- FRAMESHIFT NA TCGA-DX-A1KW-01A-22R-A24X-07 ZDHHC17-CSRP2 4 32 chr12:76764329:+ chr12:76866261:- . NA TCGA-DX-A1KW-01A-22R-A24X-07 CCT2-OR8S1 4 31 chr12:69586818:+ chr12:48528503:+ . NA TCGA-DX-A1KW-01A-22R-A24X-07 KNTC1-BTBD11 7 18 chr12:122580670:+ chr12:107659361:+ . NA TCGA-DX-A1KW-01A-22R-A24X-07 TMEM120B-GRIP1 6 21 chr12:121773513:+ chr12:66379436:- INFRAME NA TCGA-DX-A1KW-01A-22R-A24X-07 CLIP1-MORN3 1 4 chr12:122332987:- chr12:121669512:- . NA TCGA-DX-A1KW-01A-22R-A24X-07 FMNL3-HECTD4 1000 1000 chr12:49707057:- chr12:112283304:- . NA TCGA-DX-A1KW-01A-22R-A24X-07 PTPN11-MYRFL 1000 1000 chr12:112419124:+ chr12:69903643:+ . NA TCGA-DX-A1KX-01A-22R-A24X-07 BCL9L-DGKI 9 53 chr11:118925238:- chr7:137690002:- . NA TCGA-DX-A1KX-01A-22R-A24X-07 CHRDL1-SLC25A5 4 45 chrX:110719835:- chrX:119468523:+ INFRAME NA TCGA-DX-A1KX-01A-22R-A24X-07 ZNF98-ACTR5 7 22 chr19:22514364:- chr20:38771559:+ INFRAME NA TCGA-DX-A1KX-01A-22R-A24X-07 STEAP4-PON1 1 35 chr7:88306792:- chr7:95316789:- . NA TCGA-DX-A1KX-01A-22R-A24X-07 FAM180A-AHCYL2 3 21 chr7:135737099:- chr7:129379638:+ INFRAME NA TCGA-DX-A1KX-01A-22R-A24X-07 HNF4A-MYBL2 4 11 chr20:44407475:+ chr20:43711488:+ FRAMESHIFT NA TCGA-DX-A1KX-01A-22R-A24X-07 ARL15-PARP8 1 20 chr5:54310432:- chr5:50750151:+ FRAMESHIFT NA TCGA-DX-A1KX-01A-22R-A24X-07 CLIC2-MAMLD1 3 9 chrX:155334371:- chrX:150469745:+ INFRAME NA TCGA-DX-A1KX-01A-22R-A24X-07 PTPRD-MTERF4 2 8 chr9:8633317:- chr2:241075682:- . Likely Oncogenic NA TCGA-DX-A1KX-01A-22R-A24X-07 YAP1-REG4 2 6 chr11:102114394:+ chr1:119798602:- FRAMESHIFT Likely Oncogenic NA TCGA-DX-A1KX-01A-22R-A24X-07 TEKT4P2-TMLHE 1 9 chr21:9127489:- chrX:155545277:- . NA TCGA-DX-A1KX-01A-22R-A24X-07 PFKFB3-PALM2 1 6 chr10:6226365:+ chr9:109867491:+ INFRAME NA TCGA-DX-A1KX-01A-22R-A24X-07 SLC6A8-PREP 1 4 chrX:153688836:+ chr6:105397927:- FRAMESHIFT NA TCGA-DX-A1KX-01A-22R-A24X-07 ARFGEF2-HNF4A 1 3 chr20:48922010:+ chr20:44406058:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 SLC16A7-NUP107 63 359 chr12:59596236:+ chr12:68733452:+ . NA TCGA-DX-A1L0-01A-11R-A24X-07 NHSL1-CDIP1 45 209 chr6:138545623:- chr16:4514664:- . NA TCGA-DX-A1L0-01A-11R-A24X-07 SLFN5-TBC1D15 42 142 chr17:35243143:+ chr12:71913826:+ . NA TCGA-DX-A1L0-01A-11R-A24X-07 HMBOX1-BNIP3L 25 137 chr8:29018913:+ chr8:26505307:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 ZFC3H1-MON2 23 113 chr12:71656885:- chr12:62578445:+ FRAMESHIFT NA TCGA-DX-A1L0-01A-11R-A24X-07 LGR5-TSPAN8 6 63 chr12:71440292:+ chr12:71282819:- . NA TCGA-DX-A1L0-01A-11R-A24X-07 C1orf21-INTS7 11 42 chr1:184598461:+ chr1:211952701:- FRAMESHIFT NA TCGA-DX-A1L0-01A-11R-A24X-07 MON2-TBC1D15 5 44 chr12:62566450:+ chr12:71872070:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 CPM-MON2 5 40 chr12:68932678:- chr12:62532438:+ FRAMESHIFT NA TCGA-DX-A1L0-01A-11R-A24X-07 MARS-MSRB3 5 40 chr12:57504299:+ chr12:65488004:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 ATP9B-LUC7L 5 36 chr18:79193263:+ chr16:208188:- INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 RAB21-FRS2 4 30 chr12:71774022:+ chr12:69562180:+ . NA TCGA-DX-A1L0-01A-11R-A24X-07 DIAPH2-RAB3IP 4 25 chrX:96685190:+ chr12:69755384:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 HMGA2-ARFGAP2 3 28 chr12:65825381:+ chr11:47172333:- INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 ANKH-DNAH5 5 19 chr5:14871352:- chr5:13737495:- INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 ATP9B-ATRX 4 20 chr18:79096649:+ chrX:77654200:- INFRAME Likely Oncogenic NA TCGA-DX-A1L0-01A-11R-A24X-07 NFIC-IL4I1 3 24 chr19:3382243:+ chr19:49891107:- FRAMESHIFT NA TCGA-DX-A1L0-01A-11R-A24X-07 HMGA2-RHBG 6 0 chr12:65828087:+ chr1:156371185:+ FRAMESHIFT NA TCGA-DX-A1L0-01A-11R-A24X-07 XPR1-TNR 3 9 chr1:180632270:+ chr1:175528369:- . NA TCGA-DX-A1L0-01A-11R-A24X-07 EML1-BASP1 2 11 chr14:99851035:+ chr5:17275208:+ . NA TCGA-DX-A1L0-01A-11R-A24X-07 RBFA-MRPS35 4 2 chr18:80036710:+ chr12:27737539:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 SLC9A8-B4GALT5 1 13 chr20:49815189:+ chr20:49656702:- INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 KANK1-DNAH5 2 3 chr9:504754:+ chr5:13931244:- . NA TCGA-DX-A1L0-01A-11R-A24X-07 TIAM2-PPIL4 2 3 chr6:155165409:+ chr6:149505704:- INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 RPS12-COL3A1 1 6 chr6:132816563:+ chr2:188994541:+ INFRAME NA TCGA-DX-A1L0-01A-11R-A24X-07 RMND1-TIAM2 1 5 chr6:151421245:- chr6:155127490:+ . NA TCGA-DX-A1L0-01A-11R-A24X-07 METTL21B-MARS 1 4 chr12:57773128:+ chr12:57487937:+ . NA TCGA-DX-A1L0-01A-11R-A24X-07 NUP43-SHPRH 1 2 chr6:149738643:- chr6:145894977:- FRAMESHIFT NA TCGA-DX-A1L0-01A-11R-A24X-07 TBC1D15-SLC16A7 1000 1000 chr12:71873003:+ chr12:59771219:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 GATAD2B-GRM8 86 330 chr1:153922733:- chr7:126446372:- . NA TCGA-DX-A1L2-01A-22R-A24X-07 LINC-PINT-C1orf61 28 407 chr7:131052425:- chr1:156429548:- . NA TCGA-DX-A1L2-01A-22R-A24X-07 TGFBR2-XPC 38 102 chr3:30606977:+ chr3:14173062:- INFRAME Likely Oncogenic NA TCGA-DX-A1L2-01A-22R-A24X-07 LINC-PINT-FMO3 12 148 chr7:131052425:- chr1:171092653:+ . NA TCGA-DX-A1L2-01A-22R-A24X-07 ARHGEF11-CD48 14 72 chr1:157044299:- chr1:160685189:- FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 INPP4A-EEF1E1 9 27 chr2:98577143:+ chr6:8080030:- FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 SLC38A10-TMEM207 3 31 chr17:81270918:- chr3:190429731:- FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 POU2F1-ATP6V1F 1 31 chr1:167220958:+ chr7:128865377:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 PEX11B-PDZK1 4 16 chr1:145918633:- chr1:145682636:- FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 BTD-BCAS3 3 15 chr3:15644931:+ chr17:61368327:+ INFRAME NA TCGA-DX-A1L2-01A-22R-A24X-07 MKLN1-DNM3 2 16 chr7:131327997:+ chr1:171987656:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 TBX19-PCP4L1 3 11 chr1:168308877:+ chr1:161283668:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 HP1BP3-ZMYM4 2 13 chr1:20776597:- chr1:35358925:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 LPCAT1-MED13 2 13 chr5:1501461:- chr17:61947017:- FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 CSNK1D-GSDMA 1 11 chr17:82252434:- chr17:39965683:+ . NA TCGA-DX-A1L2-01A-22R-A24X-07 RBMS3-LPCAT1 1 9 chr3:29281756:+ chr5:1501603:- INFRAME NA TCGA-DX-A1L2-01A-22R-A24X-07 USP15-STAT6 1 6 chr12:62260503:+ chr12:57108299:- . NA TCGA-DX-A1L2-01A-22R-A24X-07 CREB3L4-FCER1A 1 4 chr1:153969455:+ chr1:159302854:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 UCK2-TBX19 1 4 chr1:165827932:+ chr1:168308742:+ FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 ZBTB25-MB21D2 1 4 chr14:64487114:- chr3:192799650:- INFRAME NA TCGA-DX-A1L2-01A-22R-A24X-07 AKAP8L-EPS15L1 1 1 chr19:15418911:- chr19:16421476:- FRAMESHIFT NA TCGA-DX-A1L2-01A-22R-A24X-07 CRTC2-SH2D1B 1000 1000 chr1:153952876:- chr1:162412138:- . NA TCGA-DX-A23V-01A-11R-A29R-07 YEATS4-PARPBP 64 354 chr12:69362907:+ chr12:102195951:+ INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 TSPAN31-WIF1 49 251 chr12:57747131:+ chr12:65077854:- INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 DRAM1-NTN4 17 107 chr12:101877920:+ chr12:95670146:- FRAMESHIFT NA TCGA-DX-A23V-01A-11R-A29R-07 SCYL2-GIT2 16 92 chr12:100338584:+ chr12:109961685:- INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 TCTN1-FGGY 10 74 chr12:110614402:+ chr1:59321536:+ . NA TCGA-DX-A23V-01A-11R-A29R-07 GNPTAB-FGD6 9 39 chr12:101749101:- chr12:95172744:- FRAMESHIFT NA TCGA-DX-A23V-01A-11R-A29R-07 OMA1-CDK4 6 44 chr1:58506060:- chr12:57748617:- INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 DAB1-CDK4 6 42 chr1:58506060:- chr12:57748617:- . NA TCGA-DX-A23V-01A-11R-A29R-07 YEATS4-USP15 6 27 chr12:69362907:+ chr12:62325872:+ INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 METTL21B-LTA4H 4 34 chr12:57773128:+ chr12:96024547:- FRAMESHIFT NA TCGA-DX-A23V-01A-11R-A29R-07 FGD6-TBC1D30 4 31 chr12:95134739:- chr12:64838683:+ INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 SYDE2-TCTN1 4 6 chr1:85200252:- chr12:110619836:+ INFRAME NA TCGA-DX-A23V-01A-11R-A29R-07 TTLL7-TTC41P 1 11 chr1:83937852:- chr12:103916083:- . NA TCGA-DX-A23V-01A-11R-A29R-07 TRHDE-ANKS1B 1 9 chr12:72563040:+ chr12:98751522:- FRAMESHIFT NA TCGA-DX-A23V-01A-11R-A29R-07 USP15-ANKS1B 1 3 chr12:62325933:+ chr12:98751522:- FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 CPSF6-TSPAN31 256 2016 chr12:69239706:+ chr12:57746589:+ INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 NHSL1-PRDM1 71 247 chr6:138496219:- chr6:106088201:+ FRAMESHIFT Likely Oncogenic NA TCGA-DX-A23Y-01A-11R-A27Q-07 CCT2-DEPDC4 30 181 chr12:69593613:+ chr12:100252536:- INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 MRPS18A-TRAF3IP2 24 81 chr6:43671840:- chr6:111572983:- FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 TRMT61A-NDUFA12 20 90 chr14:103532848:+ chr12:94994257:- INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 POP4-CLEC2B 28 1 chr19:29606325:+ chr12:9857637:- INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 PPP1CC-KCNC2 6 62 chr12:110742653:- chr12:75041206:- INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 TTK-TMEM63B 9 30 chr6:80011548:+ chr6:44151846:+ INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 MDM2-C12orf50 7 37 chr12:68813628:+ chr12:88030237:- . NA TCGA-DX-A23Y-01A-11R-A27Q-07 NT5E-MDM2 4 44 chr6:85450478:+ chr12:68813554:+ INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 PTK7-CNOT2 7 30 chr6:43076567:+ chr12:70353829:+ FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 PPIL4-CLEC4A 4 41 chr6:149525143:- chr12:8135585:+ FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 ORC6-SHCBP1 8 21 chr16:46696085:+ chr16:46621409:- . NA TCGA-DX-A23Y-01A-11R-A27Q-07 PPFIA2-MRPL14 10 7 chr12:81676791:- chr6:44116629:- . NA TCGA-DX-A23Y-01A-11R-A27Q-07 TSFM-FRS2 6 18 chr12:57793073:+ chr12:69486202:+ . NA TCGA-DX-A23Y-01A-11R-A27Q-07 TFDP2-LONP2 6 16 chr3:142149183:- chr16:48262778:+ . NA TCGA-DX-A23Y-01A-11R-A27Q-07 POLH-C12orf71 5 18 chr6:43605319:+ chr12:27081467:- INFRAME NA TCGA-DX-A23Y-01A-11R-A27Q-07 ZNRD1ASP-TRIM40 3 23 chr6:30060741:- chr6:30136412:+ . NA TCGA-DX-A23Y-01A-11R-A27Q-07 ETV6-EPB41L2 4 14 chr12:11650160:+ chr6:130901180:- FRAMESHIFT Likely Oncogenic NA TCGA-DX-A23Y-01A-11R-A27Q-07 ZNF354C-PRSS3 5 7 chr5:179062095:+ chr9:33796643:+ FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 SPPL3-KRR1 3 12 chr12:120903845:- chr12:75508446:- FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 FRS2-CAPS2 2 12 chr12:69470530:+ chr12:75321576:- . NA TCGA-DX-A23Y-01A-11R-A27Q-07 NDUFA12-IGHV3-43 4 3 chr12:94994170:- chr14:106470571:- FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 DCAF13-DECR1 1 11 chr8:103427252:+ chr8:90036841:+ FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 HVCN1-CPM 2 4 chr12:110688625:- chr12:68885889:- . NA TCGA-DX-A23Y-01A-11R-A27Q-07 STAG1-ANKS1B 1 8 chr3:136464881:- chr12:99154395:- FRAMESHIFT NA TCGA-DX-A23Y-01A-11R-A27Q-07 BEST3-MYRFL 2 2 chr12:69699205:- chr12:69903644:+ . NA TCGA-DX-A23Y-01A-11R-A27Q-07 CRYBG3-FRS2 1 6 chr3:97881219:+ chr12:69530865:+ . NA TCGA-DX-A240-01A-32R-A27Q-07 IL1RAPL1-KERA 151 675 chrX:29668504:+ chr12:91057794:- . NA TCGA-DX-A240-01A-32R-A27Q-07 PIGC-KERA 30 291 chr1:172443988:- chr12:91057794:- . NA TCGA-DX-A240-01A-32R-A27Q-07 SLC2A13-ARHGDIB 19 87 chr12:40028301:- chr12:14947949:- INFRAME NA TCGA-DX-A240-01A-32R-A27Q-07 DCAF6-UFC1 21 65 chr1:167951861:+ chr1:161153926:+ . NA TCGA-DX-A240-01A-32R-A27Q-07 ADIPOR2-SLC2A13 10 72 chr12:1754514:+ chr12:40048210:- FRAMESHIFT NA TCGA-DX-A240-01A-32R-A27Q-07 OS9-CD48 13 29 chr12:57696373:+ chr1:160681468:- FRAMESHIFT NA TCGA-DX-A240-01A-32R-A27Q-07 RBBP7-NDUFAF4 5 52 chrX:16869076:- chr6:96896847:- FRAMESHIFT NA TCGA-DX-A240-01A-32R-A27Q-07 MDM2-SLAMF9 10 19 chr12:68836749:+ chr1:159953653:- FRAMESHIFT NA TCGA-DX-A240-01A-32R-A27Q-07 RAP1B-IGSF8 5 27 chr12:68654252:+ chr1:160095246:- FRAMESHIFT NA TCGA-DX-A240-01A-32R-A27Q-07 NHS-F11R 4 29 chrX:17376322:+ chr1:161001353:- INFRAME NA TCGA-DX-A240-01A-32R-A27Q-07 TIGAR-CRP 4 21 chr12:4321303:+ chr1:159714528:- . NA TCGA-DX-A240-01A-32R-A27Q-07 CPNE8-PRMT8 2 10 chr12:38873004:- chr12:3540606:+ INFRAME NA TCGA-DX-A240-01A-32R-A27Q-07 NIT1-TIGAR 2 6 chr1:161120232:+ chr12:4349819:+ INFRAME NA TCGA-DX-A240-01A-32R-A27Q-07 BICD1-OS9 2 4 chr12:32334667:+ chr12:57715760:+ INFRAME NA TCGA-DX-A240-01A-32R-A27Q-07 DMD-TMEM117 2 4 chrX:32518008:- chr12:44211290:+ INFRAME NA TCGA-DX-A240-01A-32R-A27Q-07 SLC2A13-HSD17B6 2 2 chr12:40105253:- chr12:56773834:+ . NA TCGA-DX-A240-01A-32R-A27Q-07 MDH2-FGL2 1 4 chr7:76048226:+ chr7:77196985:- FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 HSP90B1-TMEM19 107 520 chr12:103934287:+ chr12:71689591:+ FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 FBXL7-NRDC 53 441 chr5:15616072:+ chr1:51834170:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 MOK-MUCL1 39 369 chr14:102304962:- chr12:54855116:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 FRS2-CPM 17 402 chr12:69470530:+ chr12:68885889:- . NA TCGA-DX-A2IZ-01A-11R-A21T-07 GLT8D2-YY1 54 249 chr12:104003135:- chr14:100274698:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 PPP1R13B-PYM1 30 66 chr14:103847299:- chr12:55903480:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 PDCD6-FRS2 12 133 chr5:272772:+ chr12:69571276:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 RAP1B-SCYL2 3 167 chr12:68611052:+ chr12:100317803:+ . NA TCGA-DX-A2IZ-01A-11R-A21T-07 SPRYD4-MDM1 16 93 chr12:56472089:+ chr12:68326908:- . NA TCGA-DX-A2IZ-01A-11R-A21T-07 GNPTAB-TRHDE 20 65 chr12:101830559:- chr12:72286681:+ FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 YY1-TESPA1 12 62 chr14:100239923:+ chr12:54950390:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 CHST11-PTPRR 4 80 chr12:104601991:+ chr12:70764778:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 APPL2-TUBA1C 9 44 chr12:105229125:- chr12:49269465:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 STAT2-B4GALNT1 7 33 chr12:56360058:- chr12:57632133:- . NA TCGA-DX-A2IZ-01A-11R-A21T-07 CCDC127-MUCL1 3 48 chr5:216729:- chr12:54856770:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 SPRED1-TMCO5B 12 9 chr15:38253217:+ chr15:33246613:- . NA TCGA-DX-A2IZ-01A-11R-A21T-07 YEATS4-AGAP2 3 38 chr12:69365884:+ chr12:57734173:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 RAB21-MYBPC1 3 32 chr12:71755288:+ chr12:101614496:+ FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 TRHDE-TBC1D15 5 22 chr12:72378121:+ chr12:71893222:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 CHPT1-TXNRD1 4 23 chr12:101698134:+ chr12:104313245:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 AHRR-AVIL 3 23 chr5:376716:+ chr12:57799920:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 PAN2-LYZ 1 24 chr12:56324294:- chr12:69350108:+ FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 YEATS4-ARHGEF25 2 17 chr12:69370975:+ chr12:57614331:+ FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 FAM19A2-TMBIM4 4 5 chr12:61753622:- chr12:66153448:- FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 SARNP-NT5DC3 2 13 chr12:55794359:- chr12:103806929:- FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 ITGA7-MYRFL 3 7 chr12:55695522:- chr12:69955363:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 NT5DC3-PTPRR 2 7 chr12:103814937:- chr12:70764778:- INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 SLC35E3-TMEM132B 2 6 chr12:68752190:+ chr12:125583851:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 MBD6-CPM 1 7 chr12:57524416:+ chr12:68957678:- . NA TCGA-DX-A2IZ-01A-11R-A21T-07 NFYB-HCFC2 1 7 chr12:104128424:- chr12:104087986:+ INFRAME NA TCGA-DX-A2IZ-01A-11R-A21T-07 DAP-ESYT1 1 6 chr5:10748175:- chr12:56142578:+ FRAMESHIFT NA TCGA-DX-A2IZ-01A-11R-A21T-07 RYR3-LRRC57 1 1 chr15:33311096:+ chr15:42545262:- INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 MPZL1-TNFSF4 16 175 chr1:167776166:+ chr1:173188569:- INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 C21orf91-COLGALT2 11 104 chr21:17818192:- chr1:183945564:- FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 CPSF6-MYF6 10 40 chr12:69239706:+ chr12:80707855:+ INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 TSFM-RCSD1 5 50 chr12:57783283:+ chr1:167630243:+ . NA TCGA-DX-A2J0-01A-11R-A21T-07 METTL25-GALNT9 7 37 chr12:82403130:+ chr12:132286430:- INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 TRIO-TERT 7 33 chr5:14406672:+ chr5:1282624:- FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 ELK3-CDK17 5 24 chr12:96223773:+ chr12:96300360:- INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 TBX15-FMN2 6 17 chr1:118987591:- chr1:240257945:+ FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 MAGI3-MROH3P 5 14 chr1:113590658:+ chr1:200948092:+ . NA TCGA-DX-A2J0-01A-11R-A21T-07 TMBIM4-NAV3 3 19 chr12:66169855:- chr12:78127167:+ FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 CD244-DDR2 3 14 chr1:160838451:- chr1:162741579:+ . NA TCGA-DX-A2J0-01A-11R-A21T-07 TBX15-MAGI3 2 14 chr1:118987591:- chr1:113580542:+ INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 BROX-SUSD4 2 13 chr1:222712942:+ chr1:223359121:- . NA TCGA-DX-A2J0-01A-11R-A21T-07 SUCO-C12orf42 1 17 chr1:172533497:+ chr12:103302559:- FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 SOAT1-AGAP2 1 14 chr1:179347697:+ chr12:57735427:- FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 SUCO-LIN7A 3 6 chr1:172533497:+ chr12:80811683:- FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 ZDHHC17-NAV3 2 7 chr12:76764329:+ chr12:78146369:+ INFRAME NA TCGA-DX-A2J0-01A-11R-A21T-07 CCDC59-KCNMB4 1 10 chr12:82354495:- chr12:70430485:+ FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 IRAK3-DYRK2 1 6 chr12:66228370:+ chr12:67657106:+ FRAMESHIFT NA TCGA-DX-A2J0-01A-11R-A21T-07 DDX59-CEPT1 1 3 chr1:200648439:- chr1:111182187:+ INFRAME NA TCGA-DX-A2J1-01A-11R-A21T-07 NR4A1-SARNP 276 2200 chr12:52043911:+ chr12:55757553:- INFRAME NA TCGA-DX-A2J1-01A-11R-A21T-07 HMGA2-SARNP 123 1331 chr12:65951415:+ chr12:55752840:- . NA TCGA-DX-A2J1-01A-11R-A21T-07 ORMDL2-NR4A1 36 71 chr12:55818112:+ chr12:52043694:+ . NA TCGA-DX-A2J1-01A-11R-A21T-07 SRGAP1-TMEM5 13 63 chr12:63844883:+ chr12:63808675:+ FRAMESHIFT NA TCGA-DX-A2J1-01A-11R-A21T-07 MDM2-NAV3 7 40 chr12:68813628:+ chr12:77571859:+ . NA TCGA-DX-A2J1-01A-11R-A21T-07 ZDHHC17-MMP27 7 40 chr12:76764812:+ chr11:102703118:- FRAMESHIFT NA TCGA-DX-A2J1-01A-11R-A21T-07 HMGA2-CD63 6 31 chr12:65951415:+ chr12:55727339:- INFRAME NA TCGA-DX-A2J1-01A-11R-A21T-07 MGST1-COL27A1 3 6 chr12:16347710:+ chr9:114282277:+ . NA TCGA-DX-A2J1-01A-11R-A21T-07 SPATS2-ATP5G2 1 11 chr12:49371290:+ chr12:53665428:- . NA TCGA-DX-A2J1-01A-11R-A21T-07 ZBTB24-BEST3 2 7 chr6:109481075:- chr12:69655813:- FRAMESHIFT NA TCGA-DX-A2J1-01A-11R-A21T-07 CDK19-LYZ 1 6 chr6:110667434:- chr12:69350108:+ FRAMESHIFT NA TCGA-DX-A2J1-01A-11R-A21T-07 RPF2-SLC16A10 1 1 chr6:111008137:+ chr6:111172695:+ INFRAME NA TCGA-DX-A2J4-01A-32R-A21T-07 ZNF562-DTX3 11 50 chr19:9675015:- chr12:57604795:+ . NA TCGA-DX-A2J4-01A-32R-A21T-07 ZNF44-MYRFL 15 26 chr19:12294692:- chr12:69952799:+ FRAMESHIFT NA TCGA-DX-A2J4-01A-32R-A21T-07 TSPAN19-CPSF6 6 18 chr12:85014320:- chr12:69273864:+ . NA TCGA-DX-A2J4-01A-32R-A21T-07 LAMA1-L3MBTL4 1 16 chr18:6980521:- chr18:6138296:- INFRAME NA TCGA-DX-A2J4-01A-32R-A21T-07 RPAP3-AVIL 1 11 chr12:47679493:- chr12:57803669:- INFRAME NA TCGA-DX-A2J4-01A-32R-A21T-07 PPFIA2-SYT1 1 3 chr12:81457765:- chr12:79047297:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 ACTN4-NIPAL2 69 681 chr19:38724616:+ chr8:98193094:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 C12orf65-EIF4EBP1 90 332 chr12:123233531:+ chr8:38057081:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 NCOA6-LSM1 66 174 chr20:34768464:- chr8:38172033:- INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 CAMKK2-PMCH 36 102 chr12:121296638:- chr12:102197171:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 PITPNM2-ARHGEF25 3 168 chr12:123149776:- chr12:57612930:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 LRRC4-LTA4H 17 85 chr7:128028867:- chr12:96018903:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 MLXIP-ASH2L 8 115 chr12:122079266:+ chr8:38138816:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 EXOC4-AKR1B1 1 138 chr7:133253187:+ chr7:134451753:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 KDM2B-LRRIQ1 19 37 chr12:121574547:- chr12:85244789:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 MLXIP-TSPAN8 2 101 chr12:122079266:+ chr12:71282819:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 ELK3-SBNO1 9 68 chr12:96194705:+ chr12:123350441:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 TSPAN8-ASH2L 7 64 chr12:71282716:- chr8:38138816:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 CCT2-KCNC2 9 49 chr12:69586344:+ chr12:75043813:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 ZNF71-HSPB8 14 27 chr19:56601591:+ chr12:119187025:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 HDAC11-CDH18 10 41 chr3:13483564:+ chr5:19981178:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 MCRS1-SRRM4 7 47 chr12:49563001:- chr12:119156495:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 COPZ1-GNPTAB 15 8 chr12:54325181:+ chr12:101796762:- INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 TRHDE-C12orf75 11 23 chr12:72286954:+ chr12:105395632:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 ASH2L-CASS4 7 31 chr8:38133546:+ chr20:56445900:+ INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 ERBB3-TMEM198B 6 32 chr12:56088868:+ chr12:55834851:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 GLIPR1L1-RAB3IP 9 11 chr12:75334902:+ chr12:69755384:+ INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 SEC16A-RXRA 4 27 chr9:136459134:- chr9:134401632:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 NCOR2-NUP37 6 16 chr12:124419957:- chr12:102118583:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 MPHOSPH9-ELK3 6 14 chr12:123210056:- chr12:96246940:+ INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 KCCAT198-CPM 6 11 chr12:105326904:- chr12:68871956:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 FGD5-SLC6A6 3 22 chr3:14821596:+ chr3:14484867:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 FRS2-SBNO1 2 24 chr12:69470530:+ chr12:123350441:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 TSFM-CPM 4 16 chr12:57793073:+ chr12:68885889:- INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 GNPTAB-DRAM1 4 13 chr12:101830626:- chr12:101897863:+ INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 CAMSAP1-LCN8 3 15 chr9:135881633:- chr9:136757168:- INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 EXOC4-ELK3 5 7 chr7:133253331:+ chr12:96247684:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 SEMA5A-TGIF2 3 15 chr5:9545584:- chr20:36578741:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 ZNF71-MYRFL 2 15 chr19:56601591:+ chr12:69855280:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 PHF20-MROH8 3 10 chr20:35927879:+ chr20:37172057:- INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 CHCHD3-CSMD1 2 13 chr7:132885662:- chr8:3348161:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 B3GNT4-TSPAN31 1 16 chr12:122207812:+ chr12:57745745:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 HSPB8-MYRFL 4 3 chr12:119193865:+ chr12:69855280:+ . NA TCGA-DX-A3LS-01A-11R-A21T-07 BAK1-FAM83C 2 10 chr6:33575298:- chr20:35288958:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 GLIS3-TERT 1 13 chr9:4117768:- chr5:1282624:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 KMT5A-ARHGEF25 1 12 chr12:123405074:+ chr12:57614967:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 ANAPC5-LTA4H 1 10 chr12:121318277:- chr12:96009148:- FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 ARMC12-ERGIC3 2 6 chr6:35738518:+ chr20:35555044:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 INPP5E-GLT6D1 1 8 chr9:136438608:- chr9:135631478:- INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 HVCN1-GOLGA3 2 2 chr12:110689726:- chr12:132808549:- . NA TCGA-DX-A3LS-01A-11R-A21T-07 ARHGAP10-EDNRA 1 5 chr4:147966839:+ chr4:147519851:+ INFRAME NA TCGA-DX-A3LS-01A-11R-A21T-07 ATP2B1-EXOC4 1 3 chr12:89655679:- chr7:134064291:+ FRAMESHIFT NA TCGA-DX-A3LS-01A-11R-A21T-07 CEP85L-WASHC3 1000 1000 chr6:118565529:- chr12:102061346:- INFRAME NA TCGA-DX-A3LU-01A-11R-A21T-07 ZDHHC17-NCR2 49 245 chr12:76764329:+ chr6:41335831:+ . NA TCGA-DX-A3LU-01A-11R-A21T-07 ZNF318-CD2AP 40 112 chr6:43368967:- chr6:47580864:+ INFRAME NA TCGA-DX-A3LU-01A-11R-A21T-07 DHX15-CCND3 1 12 chr4:24541873:- chr6:41940585:- INFRAME NA TCGA-DX-A3LU-01A-11R-A21T-07 USP49-DAAM2 2 4 chr6:41798875:- chr6:39883962:+ INFRAME NA TCGA-DX-A3LU-01A-11R-A21T-07 UBR2-BYSL 1 5 chr6:42652645:+ chr6:41927374:+ FRAMESHIFT NA TCGA-DX-A3LW-01A-21R-A21T-07 BLOC1S1-CPM 5 45 chr12:55717005:+ chr12:68885889:- FRAMESHIFT NA TCGA-DX-A3LW-01A-21R-A21T-07 FIGNL2-SMIM20 9 29 chr12:51848540:- chr4:25928313:+ . NA TCGA-DX-A3LW-01A-21R-A21T-07 OR10AE3P-CD63 11 3 chr12:55646614:- chr12:55729072:- . NA TCGA-DX-A3LW-01A-21R-A21T-07 RBM39-CRYZL1 1 25 chr20:35716740:- chr21:33603537:- FRAMESHIFT NA TCGA-DX-A3LW-01A-21R-A21T-07 CDK2-PAN2 2 9 chr12:55969576:+ chr12:56325454:- INFRAME NA TCGA-DX-A3LW-01A-21R-A21T-07 RPSAP52-TSPAN8 1 10 chr12:65826843:- chr12:71157787:- . NA TCGA-DX-A3LW-01A-21R-A21T-07 CNOT2-ANO6 3 1 chr12:70311017:+ chr12:45367688:+ INFRAME NA TCGA-DX-A3LW-01A-21R-A21T-07 USP15-CNOT2 1 7 chr12:62349307:+ chr12:70353829:+ INFRAME NA TCGA-DX-A3LW-01A-21R-A21T-07 SEL1L3-COQ10A 1 1 chr4:25802283:- chr12:56267794:+ FRAMESHIFT NA TCGA-DX-A3LY-01B-11R-A27Q-07 DCTN2-SRGAP1 129 1017 chr12:57547028:- chr12:63983947:+ FRAMESHIFT NA TCGA-DX-A3LY-01B-11R-A27Q-07 PA2G4-MARK1 11 40 chr12:56104825:+ chr1:220579354:+ FRAMESHIFT NA TCGA-DX-A3LY-01B-11R-A27Q-07 CD55-RGS21 9 41 chr1:207339417:+ chr1:192365921:+ FRAMESHIFT NA TCGA-DX-A3LY-01B-11R-A27Q-07 DDX46-TPO 7 40 chr5:134777725:+ chr2:1542421:+ INFRAME NA TCGA-DX-A3LY-01B-11R-A27Q-07 NAA10-TBC1D30 2 24 chrX:153934884:- chr12:64864668:+ INFRAME NA TCGA-DX-A3LY-01B-11R-A27Q-07 ARHGAP4-TBC1D30 2 21 chrX:153934884:- chr12:64864668:+ . NA TCGA-DX-A3LY-01B-11R-A27Q-07 STK40-OSCP1 4 12 chr1:36385723:- chr1:36438910:- . NA TCGA-DX-A3LY-01B-11R-A27Q-07 CDK2-ERBB3 4 9 chr12:55967124:+ chr12:56086531:+ FRAMESHIFT NA TCGA-DX-A3LY-01B-11R-A27Q-07 DGKD-NDUFA10 2 17 chr2:233390483:+ chr2:240022340:- INFRAME NA TCGA-DX-A3LY-01B-11R-A27Q-07 USP12-NXF3 3 10 chr13:27089883:- chrX:103084495:- INFRAME NA TCGA-DX-A3LY-01B-11R-A27Q-07 TYK2-CIB3 5 1 chr19:10378214:- chr19:16164913:- INFRAME NA TCGA-DX-A3LY-01B-11R-A27Q-07 HDX-ERICH1 2 5 chrX:84502342:- chr8:664676:- . NA TCGA-DX-A3LY-01B-11R-A27Q-07 OSBPL8-ZDHHC17 1 9 chr12:76559397:- chr12:76805317:+ . NA TCGA-DX-A3LY-01B-11R-A27Q-07 R3HDM2-LRIG3 1 8 chr12:57395749:- chr12:58890796:- . NA TCGA-DX-A3LY-01B-11R-A27Q-07 DTNB-EXOC4 2 3 chr2:25673386:- chr7:133475328:+ . NA TCGA-DX-A3LY-01B-11R-A27Q-07 PTGS2-GLRX2 1 3 chr1:186680239:- chr1:193101204:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 MDM2-SYK 235 998 chr12:68809292:+ chr9:90895528:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 CRAT-TTLL11-IT1 194 506 chr9:129097250:- chr9:121885575:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 CTDSP2-AUH 150 442 chr12:57846372:- chr9:91214425:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 FRS2-CFAP54 37 492 chr12:69470530:+ chr12:96704743:+ . NA TCGA-DX-A3M1-01A-11R-A22K-07 XPOT-LYZ 27 262 chr12:64445131:+ chr12:69350108:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 ST6GALNAC6-NUP107 4 344 chr9:127887484:- chr12:68741813:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 NEDD1-TMTC2 34 183 chr12:96937393:+ chr12:82965024:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 NTN4-NUP107 22 104 chr12:95737866:- chr12:68741813:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 CRAT-TTLL11 19 62 chr9:129097250:- chr9:121870748:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 CPQ-MATN2 19 59 chr8:96785330:+ chr8:97930953:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 TANC2-CASC17 16 54 chr17:63151380:+ chr17:71185655:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 MPRIP-TNFRSF13B 10 75 chr17:17042971:+ chr17:16952583:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 HMGA2-NR2C1 20 31 chr12:65838569:+ chr12:95067391:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 FRS2-HMGA2 12 34 chr12:69470530:+ chr12:65838519:+ . NA TCGA-DX-A3M1-01A-11R-A22K-07 CASC3-HNF1B 8 45 chr17:40141607:+ chr17:37687392:- INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 NDUFA12-ST6GALNAC6 6 53 chr12:94994170:- chr9:127896332:- INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 FAM129B-C16orf62 8 36 chr9:127523679:- chr16:19691353:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 LAMA2-UQCRB 3 48 chr6:129369990:+ chr8:96233227:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 VPS13B-STAU2 2 46 chr8:99038566:+ chr8:73422702:- INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 VEZT-C12orf29 3 40 chr12:95252071:+ chr12:88040148:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 CEP290-VEZT 6 27 chr12:88092681:- chr12:95251940:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 LIN7A-RPSAP52 8 18 chr12:80889251:- chr12:65759031:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 WWP1-UTP23 3 37 chr8:86431743:+ chr8:116848888:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 EDA-TEX11 3 31 chrX:69616704:+ chrX:70873307:- INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 TNFRSF13B-MPRIP 2 35 chr17:16948738:- chr17:17057636:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 VPS53-TXNDC17 7 10 chr17:655838:- chr17:6641753:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 ST6GALNAC6-PAWR 4 19 chr9:127894512:- chr12:79596658:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 TTC28-TEF 4 19 chr22:28096190:- chr22:41398839:+ . NA TCGA-DX-A3M1-01A-11R-A22K-07 SKA2-HEATR6 1 26 chr17:59154956:- chr17:60060096:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 ZHX2-GPRC6A 3 17 chr8:122781946:+ chr6:116828956:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 NTN4-TRHDE 4 12 chr12:95710441:- chr12:72286681:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 MRPL42-NTN4 5 5 chr12:93467554:+ chr12:95738144:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 NDUFB9-CSMD3 4 8 chr8:124543279:+ chr8:113314793:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 ABCA9-CEP112 3 9 chr17:69024214:- chr17:65689218:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 DCTN2-SYT1 1 17 chr12:57547028:- chr12:79353502:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 TMTC3-SLC35E3 2 13 chr12:88142487:+ chr12:68759157:+ . NA TCGA-DX-A3M1-01A-11R-A22K-07 TMTC2-BTBD11 2 12 chr12:82896646:+ chr12:107635285:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 TMTC3-SLC6A15 1 10 chr12:88142487:+ chr12:84892308:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 C12orf56-APPL2 2 5 chr12:64390314:- chr12:105199531:- FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 CEP126-SHANK2 1 9 chr11:101948142:+ chr11:71224796:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 TBC1D15-MARS 1 9 chr12:71880607:+ chr12:57487937:+ . NA TCGA-DX-A3M1-01A-11R-A22K-07 AUH-CPM 2 4 chr9:91296021:- chr12:68871956:- INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 CPD-TMEM132E 1 7 chr17:30385236:+ chr17:34626127:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 STAT5B-TENM4 1 7 chr17:42216014:- chr11:79215909:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 TTLL11-C12orf42 2 3 chr9:121860337:- chr12:103263371:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 ZNF292-MAP3K4 1 7 chr6:87155759:+ chr6:161070608:+ INFRAME NA TCGA-DX-A3M1-01A-11R-A22K-07 RUNX1T1-E2F5 1 5 chr8:92102857:- chr8:85202147:+ FRAMESHIFT NA TCGA-DX-A3M1-01A-11R-A22K-07 BRWD3-RNF19A 1 4 chrX:80791854:- chr8:100313372:- . NA TCGA-DX-A3M1-01A-11R-A22K-07 THRB-SLC6A1 1 4 chr3:24494687:- chr3:11015672:+ . NA TCGA-DX-A3M1-01A-11R-A22K-07 XPOT-UTP20 1 1 chr12:64439315:+ chr12:101327081:+ FRAMESHIFT NA TCGA-DX-A3M2-01A-21R-A22K-07 CRAMP1-TMEM204 12 20 chr16:1626166:+ chr16:1554782:+ FRAMESHIFT NA TCGA-DX-A3M2-01A-21R-A22K-07 NRIP1-TMLHE 12 9 chr21:15014344:- chrX:155492495:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 PTPN11-OAS1 139 823 chr12:112450512:+ chr12:112916509:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 PLXNC1-TXNRD1 79 351 chr12:94282401:+ chr12:104348353:+ INFRAME NA TCGA-DX-A3U5-01A-11R-A22K-07 EIF4G3-SPSB1 38 316 chr1:21050866:- chr1:9369273:+ . NA TCGA-DX-A3U5-01A-11R-A22K-07 TULP3-TEAD4 25 156 chr12:2909580:+ chr12:3011004:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 LTA4H-BTBD11 19 98 chr12:96002960:- chr12:107520487:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 CSRP2-SNRPF 5 146 chr12:76878938:- chr12:95861168:+ . NA TCGA-DX-A3U5-01A-11R-A22K-07 FRS2-SBF2 5 143 chr12:69537983:+ chr11:9795957:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 TMTC2-LYZ 14 93 chr12:82986046:+ chr12:69350108:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 RSF1-PRRC2C 19 48 chr11:77685105:- chr1:171566233:+ INFRAME NA TCGA-DX-A3U5-01A-11R-A22K-07 SART3-PAH 6 58 chr12:108547887:- chr12:102894918:- FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 HECTD4-LTA4H 10 39 chr12:112381952:- chr12:96006409:- INFRAME NA TCGA-DX-A3U5-01A-11R-A22K-07 PTPRR-SNRPF 6 51 chr12:70920333:- chr12:95861168:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 BTBD2-KIAA1109 11 22 chr19:1990004:- chr4:122186036:+ INFRAME NA TCGA-DX-A3U5-01A-11R-A22K-07 BTBD11-CMKLR1 8 27 chr12:107581304:+ chr12:108293664:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 ATP2B1-DCDC2 3 25 chr12:89709219:- chr6:24302044:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 GNL1-REPS1 4 19 chr6:30552467:- chr6:138921124:- FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 NAV3-AVIL 3 23 chr12:77325214:+ chr12:57816059:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 GRM1-CNOT2 6 5 chr6:146399699:+ chr12:70319298:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 NDUFA9-C12orf4 2 19 chr12:4662635:+ chr12:4491234:- FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 KIAA1109-NFKB1 3 8 chr4:122154112:+ chr4:102525512:+ . NA TCGA-DX-A3U5-01A-11R-A22K-07 CSNK1G2-PDE5A 1 14 chr19:1969959:+ chr4:119607297:- FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 HECTD4-BTBD11 1 14 chr12:112381952:- chr12:107520487:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 PDE5A-NBAT1 1 13 chr4:119596523:- chr6:22136669:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 GPN3-ATXN2 2 6 chr12:110468156:- chr12:111555919:- FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 SHPRH-B4GALNT1 2 6 chr6:145964157:- chr12:57632133:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 C4orf32-ARHGEF38 1 9 chr4:112145733:+ chr4:105706303:+ . NA TCGA-DX-A3U5-01A-11R-A22K-07 GAS2L3-PRDM1 1 9 chr12:100618587:+ chr6:106104825:+ FRAMESHIFT Likely Oncogenic NA TCGA-DX-A3U5-01A-11R-A22K-07 IFT81-TSPAN8 1 7 chr12:110136860:+ chr12:71282819:- . NA TCGA-DX-A3U5-01A-11R-A22K-07 PAPSS1-GRID2 1 2 chr4:107644802:- chr4:93515216:+ FRAMESHIFT NA TCGA-DX-A3U5-01A-11R-A22K-07 CSRP2-PTPRR 1000 1000 chr12:76878938:- chr12:70920567:- . NA TCGA-DX-A3U6-01A-11R-A29R-07 R3HDM2-TPH2 15 62 chr12:57395749:- chr12:71972519:+ . NA TCGA-DX-A3U6-01A-11R-A29R-07 CNTN2-PKP1 1 91 chr1:205053255:+ chr1:201293942:+ INFRAME NA TCGA-DX-A3U6-01A-11R-A29R-07 DYRK2-CNTN2 7 44 chr12:67649945:+ chr1:205053100:+ . NA TCGA-DX-A3U6-01A-11R-A29R-07 LRP1-CAND1 10 32 chr12:57202537:+ chr12:67292622:+ FRAMESHIFT NA TCGA-DX-A3U6-01A-11R-A29R-07 DNM3-TPH2 7 28 chr1:172253682:+ chr12:71994439:+ INFRAME NA TCGA-DX-A3U6-01A-11R-A29R-07 NUP107-PAAF1 3 24 chr12:68722152:+ chr11:73909399:+ FRAMESHIFT NA TCGA-DX-A3U6-01A-11R-A29R-07 MSRB3-ACTR5 2 15 chr12:65369026:+ chr20:38771559:+ FRAMESHIFT NA TCGA-DX-A3U6-01A-11R-A29R-07 TBC1D32-RPF2 3 7 chr6:121303617:- chr6:111024183:+ FRAMESHIFT NA TCGA-DX-A3U6-01A-11R-A29R-07 R3HDM2-MAMDC2 2 3 chr12:57395749:- chr9:70218337:+ . NA TCGA-DX-A3U6-01A-11R-A29R-07 MSRB3-ATP23 1 6 chr12:65369026:+ chr12:57951758:+ INFRAME NA TCGA-DX-A3U6-01A-11R-A29R-07 MSRB3-CCDC57 1 6 chr12:65453825:+ chr17:82101866:- FRAMESHIFT NA TCGA-DX-A3U6-01A-11R-A29R-07 ROBO2-TNNT2 1 4 chr3:77040846:+ chr1:201359663:- FRAMESHIFT NA TCGA-DX-A3U6-01A-11R-A29R-07 DCTN2-CHRNA1 1 2 chr12:57547028:- chr2:174754414:- INFRAME NA TCGA-DX-A3U7-01A-11R-A29R-07 PID1-MRPS6 45 361 chr2:229155818:- chr21:34125341:+ INFRAME NA TCGA-DX-A3U7-01A-11R-A29R-07 AGAP1-ATG4B 4 24 chr2:235494849:+ chr2:241651010:+ INFRAME NA TCGA-DX-A3U7-01A-11R-A29R-07 ZNF793-ST3GAL6 3 10 chr19:37523454:+ chr3:98820788:+ . NA TCGA-DX-A3U7-01A-11R-A29R-07 PAK4-L3MBTL4 1 15 chr19:39125919:+ chr18:6356807:- . NA TCGA-DX-A3U7-01A-11R-A29R-07 UPF1-DDX49 1000 1000 chr19:18850242:+ chr19:18920651:+ FRAMESHIFT NA TCGA-DX-A3U7-01A-11R-A29R-07 UPF1-COPE 1000 1000 chr19:18850217:+ chr19:18913043:- FRAMESHIFT NA TCGA-DX-A3UA-01A-12R-A30C-07 SEC61A1-INPP4B 25 141 chr3:128068059:+ chr4:142028914:- INFRAME Likely Oncogenic NA TCGA-DX-A3UA-01A-12R-A30C-07 SETD7-ACAD11 10 24 chr4:139517885:- chr3:132644896:- INFRAME NA TCGA-DX-A3UA-01A-12R-A30C-07 ITSN1-HNRNPUL1 4 46 chr21:33755397:+ chr19:41302665:+ INFRAME NA TCGA-DX-A3UA-01A-12R-A30C-07 ACAD11-ABCE1 6 27 chr3:132641972:- chr4:145104386:+ . NA TCGA-DX-A3UA-01A-12R-A30C-07 ZNF283-CEACAMP3 5 27 chr19:43835592:+ chr19:41602502:+ . NA TCGA-DX-A3UA-01A-12R-A30C-07 PPP3CA-HMGXB3 1 6 chr4:101346739:- chr5:150030741:+ FRAMESHIFT NA TCGA-DX-A3UA-01A-12R-A30C-07 CD63-COL1A2 1 4 chr12:55726700:- chr7:94425750:+ INFRAME NA TCGA-DX-A3UA-01A-12R-A30C-07 TIAM1-BACH1 1 2 chr21:31339243:- chr21:29321221:+ . NA TCGA-DX-A3UC-01A-11R-A30C-07 RPS6KA3-KDM6A 13 53 chrX:20266564:- chrX:45107410:+ INFRAME Likely Oncogenic NA TCGA-DX-A3UC-01A-11R-A30C-07 WDR62-LRFN3 1000 1000 chr19:36083241:+ chr19:35939410:+ . NA TCGA-DX-A3UF-01A-11R-A30C-07 PPP1R3B-ERI1 15 43 chr8:9150563:- chr8:9099859:+ . NA TCGA-DX-A3UF-01A-11R-A30C-07 UBE2G2-MIR99AHG 14 41 chr21:44801706:- chr21:16537379:+ . NA TCGA-DX-A3UF-01A-11R-A30C-07 RB1-CLEC2B 9 38 chr13:48307406:+ chr12:9862573:- . Likely Oncogenic NA TCGA-DX-A3UF-01A-11R-A30C-07 FAM126B-COQ10B 2 23 chr2:201045496:- chr2:197459932:+ . NA TCGA-DX-A3UF-01A-11R-A30C-07 GNG7-PAQR5 5 6 chr19:2520608:- chr15:69399974:+ INFRAME NA TCGA-DX-A3UF-01A-11R-A30C-07 LPAR6-TM4SF1 1 16 chr13:48404181:- chr3:149375769:- . NA TCGA-DX-A48J-01A-21R-A30C-07 SORBS1-CYP2C8 1 12 chr10:95491035:- chr10:95067691:- . NA TCGA-DX-A48J-01A-21R-A30C-07 COL4A1-FLNA 1 4 chr13:110173900:- chrX:154350207:- INFRAME NA TCGA-DX-A48K-01A-11R-A30C-07 FRYL-PIK3CD-AS2 9 57 chr4:48573186:- chr1:9681135:- . NA TCGA-DX-A48K-01A-11R-A30C-07 GAS7-USP12 3 7 chr17:10198208:- chr13:27116596:- INFRAME NA TCGA-DX-A48K-01A-11R-A30C-07 IL4I1-P4HB 1 8 chr19:49927694:- chr17:81847347:- . NA TCGA-DX-A48K-01A-11R-A30C-07 NUP62-P4HB 1 8 chr19:49927694:- chr17:81847347:- . NA TCGA-DX-A48K-01A-11R-A30C-07 RNF126-GNG7 1 5 chr19:652233:- chr19:2555188:- . NA TCGA-DX-A48L-01A-11R-A30C-07 WRAP53-PITPNA 3 14 chr17:7689701:+ chr17:1518031:- . NA TCGA-DX-A48L-01A-11R-A30C-07 GGACT-INCA1 1 20 chr13:100583825:- chr17:4990265:- . NA TCGA-DX-A48L-01A-11R-A30C-07 USP14-NOL4 1 16 chr18:180339:+ chr18:33883424:- FRAMESHIFT NA TCGA-DX-A48L-01A-11R-A30C-07 C17orf49-STK39 3 5 chr17:7015156:+ chr2:168161842:- INFRAME NA TCGA-DX-A48L-01A-11R-A30C-07 DHX33-KIF1C 1 10 chr17:5468571:- chr17:5014743:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 METTL25-ATP2B1 80 458 chr12:82399394:+ chr12:89611372:- INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 TMTC2-GNA14 44 356 chr12:82896646:+ chr9:77529253:- INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 SLC35E3-ACAD10 38 184 chr12:68746779:+ chr12:111747049:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 OSTF1-SMARCA4 36 168 chr9:75088726:+ chr19:11030730:+ INFRAME Likely Oncogenic NA TCGA-DX-A48N-01A-11R-A30C-07 TMTC1-YEATS4 16 75 chr12:29556857:- chr12:69390147:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 CCDC59-CHST11 11 87 chr12:82358223:- chr12:104756949:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 ZNF493-TMBIM4 8 61 chr19:21413649:+ chr12:66153448:- . NA TCGA-DX-A48N-01A-11R-A30C-07 PTAR1-PIP5K1B 10 41 chr9:69732139:- chr9:68888981:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 EDEM3-ZNF66 3 38 chr1:184734531:- chr19:20792512:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 UTRN-OSTF1 3 33 chr6:144730486:+ chr9:75117504:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 CNOT2-TMEM2 6 18 chr12:70311017:+ chr9:71704803:- INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 TMEM2-TRPM3 3 28 chr9:71768357:- chr9:70864511:- . NA TCGA-DX-A48N-01A-11R-A30C-07 HIVEP2-MAP7 4 22 chr6:142836935:- chr6:136421799:- . NA TCGA-DX-A48N-01A-11R-A30C-07 SWT1-COLGALT2 2 30 chr1:185231708:+ chr1:183978520:- INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 RNF2-DNM3 2 27 chr1:185093276:+ chr1:171987656:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 C12orf45-TXNRD1 4 18 chr12:104991848:+ chr12:104327515:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 FAM114A1-FRS2 3 19 chr4:38891830:+ chr12:69530865:+ . NA TCGA-DX-A48N-01A-11R-A30C-07 NAV3-CHST11 1 27 chr12:77831704:+ chr12:104601906:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 TMEM2-HMCN1 4 11 chr9:71694509:- chr1:185909337:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 UBQLN1-NAV3 4 10 chr9:83707500:- chr12:77998337:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 GPC1-ATP23 2 17 chr2:240436084:+ chr12:57945628:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 CCDC91-PTK2 2 16 chr12:28452654:+ chr8:140686694:- INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 ZNF407-CYB5A 2 15 chr18:74641122:+ chr18:74255775:- FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 NUAK1-UHRF1BP1L 2 12 chr12:106106405:- chr12:100039789:- INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 NAV3-RGL1 4 3 chr12:78190219:+ chr1:183847566:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 FAM134C-KIAA0100 2 10 chr17:42609086:- chr17:28638094:- FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 SMARCA4-BRD4 4 2 chr19:10961174:+ chr19:15257173:- . Oncogenic NA TCGA-DX-A48N-01A-11R-A30C-07 GABPB2-C12orf45 2 9 chr1:151070934:+ chr12:104991712:+ . NA TCGA-DX-A48N-01A-11R-A30C-07 PIP5K1B-CTDSP2 1 13 chr9:68876794:+ chr12:57829596:- FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 PLEKHA5-UHRF1 1 12 chr12:19269885:+ chr19:4941528:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 TTLL5-TCP11L2 2 5 chr14:75752955:+ chr12:106340826:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 CNOT2-PIP5K1B 2 3 chr12:70243480:+ chr9:68863837:+ . NA TCGA-DX-A48N-01A-11R-A30C-07 COL3A1-VIM 1 7 chr2:189008142:+ chr10:17236294:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 ENTPD5-TSHR 2 2 chr14:73986814:- chr14:81092531:+ FRAMESHIFT NA TCGA-DX-A48N-01A-11R-A30C-07 MDM2-POLR3B 1 6 chr12:68836749:+ chr12:106427197:+ INFRAME NA TCGA-DX-A48N-01A-11R-A30C-07 C12orf45-TCP11L2 1 3 chr12:104996026:+ chr12:106311041:+ . NA TCGA-DX-A48N-01A-11R-A30C-07 RNF2-PTPRR 1 1 chr1:185099962:+ chr12:70662605:- INFRAME NA TCGA-DX-A48P-01A-11R-A30C-07 PAIP2-SIL1 22 174 chr5:139341980:+ chr5:139051046:- . NA TCGA-DX-A48P-01A-11R-A30C-07 SIL1-PAIP2 2 13 chr5:139121035:- chr5:139363759:+ . NA TCGA-DX-A48P-01A-11R-A30C-07 PPP1R12A-ZZEF1 2 1 chr12:79820774:- chr17:4117166:- INFRAME NA TCGA-DX-A48R-01A-11R-A30C-07 GRK5-SUMF1 4 20 chr10:119431527:+ chr3:4068745:- INFRAME NA TCGA-DX-A48R-01A-11R-A30C-07 UHRF1-KDM4B 2 9 chr19:4950996:+ chr19:5077367:+ FRAMESHIFT NA TCGA-DX-A48R-01A-11R-A30C-07 MAP2K3-TVP23B 1 5 chr17:21300658:+ chr17:18797579:+ INFRAME NA TCGA-DX-A48R-01A-11R-A30C-07 PER1-CNTROB 1 3 chr17:8145958:- chr17:7949385:+ INFRAME NA TCGA-DX-A48R-01A-11R-A30C-07 CCDC186-TECTB 1000 1000 chr10:114163060:- chr10:112283735:+ FRAMESHIFT NA TCGA-DX-A48U-01A-11R-A30C-07 MIPOL1-TRIM38 1 5 chr14:37422949:+ chr6:25971869:+ INFRAME NA TCGA-DX-A6B8-01A-11R-A30C-07 COBLL1-FMNL2 5 3 chr2:164841156:- chr2:152521943:+ FRAMESHIFT NA TCGA-DX-A6B9-01A-12R-A32Q-07 UQCRFS1-VSTM2B 30 90 chr19:29212905:- chr19:29563846:+ INFRAME NA TCGA-DX-A6B9-01A-12R-A32Q-07 DOT1L-PSG11 34 55 chr19:2164265:+ chr19:43019048:- INFRAME NA TCGA-DX-A6B9-01A-12R-A32Q-07 SEPT9-C17orf97 3 21 chr17:77307197:+ chr17:423480:+ . NA TCGA-DX-A6B9-01A-12R-A32Q-07 PYCR1-BRI3BP 2 11 chr17:81936748:- chr12:125012534:+ FRAMESHIFT NA TCGA-DX-A6B9-01A-12R-A32Q-07 AP1M1-PYCR1 1 10 chr19:16209177:+ chr17:81936193:- FRAMESHIFT NA TCGA-DX-A6B9-01A-12R-A32Q-07 CHFR-ZNF565 2 4 chr12:132853431:- chr19:36195156:- FRAMESHIFT NA TCGA-DX-A6BE-01A-41R-A32Q-07 NAP1L1-OSTF1 44 980 chr12:76074203:- chr9:75137538:+ FRAMESHIFT NA TCGA-DX-A6BE-01A-41R-A32Q-07 PCSK5-RAB3IP 79 198 chr9:75891373:+ chr12:69784720:+ INFRAME NA TCGA-DX-A6BE-01A-41R-A32Q-07 LEMD3-LYZ 63 105 chr12:65171118:+ chr12:69350108:+ INFRAME NA TCGA-DX-A6BE-01A-41R-A32Q-07 COPZ1-ITGA7 9 1 chr12:54325181:+ chr12:55712134:- FRAMESHIFT NA TCGA-DX-A6BE-01A-41R-A32Q-07 ZCCHC6-WIF1 5 6 chr9:86325334:- chr12:65062576:- INFRAME NA TCGA-DX-A6BE-01A-41R-A32Q-07 ARID2-PTPRB 2 17 chr12:45731314:+ chr12:70540022:- INFRAME Likely Oncogenic NA TCGA-DX-A6BE-01A-41R-A32Q-07 ZNF562-SARNP 2 15 chr19:9675015:- chr12:55752840:- . NA TCGA-DX-A6BE-01A-41R-A32Q-07 CARNMT1-KIF21A 2 2 chr9:75028012:- chr12:39370261:- INFRAME NA TCGA-DX-A6BE-01A-41R-A32Q-07 HMGA2-C1orf87 1 6 chr12:65838569:+ chr1:59997816:- INFRAME NA TCGA-DX-A6BE-01A-41R-A32Q-07 ZNF562-TEP1 1 2 chr19:9674632:- chr14:20408463:- . NA TCGA-DX-A6BF-01A-11R-A30C-07 KRR1-KCNC2 57 175 chr12:75506782:- chr12:75051317:- INFRAME NA TCGA-DX-A6BF-01A-11R-A30C-07 FRS2-GLIPR1L2 38 91 chr12:69470530:+ chr12:75422904:+ . NA TCGA-DX-A6BF-01A-11R-A30C-07 ACVR2A-CPQ 13 48 chr2:147845207:+ chr8:96834973:+ INFRAME NA TCGA-DX-A6BF-01A-11R-A30C-07 CCNK-ZNF365 6 16 chr14:99495629:+ chr10:62666129:+ FRAMESHIFT NA TCGA-DX-A6BF-01A-11R-A30C-07 TMTC3-C12orf29 2 30 chr12:88176319:+ chr12:88040148:+ FRAMESHIFT NA TCGA-DX-A6BF-01A-11R-A30C-07 ARL1-UBE2N 1 31 chr12:101407642:- chr12:93411299:- FRAMESHIFT NA TCGA-DX-A6BF-01A-11R-A30C-07 DYRK2-KCNC2 4 8 chr12:67658851:+ chr12:75051317:- . NA TCGA-DX-A6BF-01A-11R-A30C-07 RAB3IP-BEST3 2 8 chr12:69756663:+ chr12:69684608:- FRAMESHIFT NA TCGA-DX-A6BF-01A-11R-A30C-07 FRS2-C1orf141 2 7 chr12:69537983:+ chr1:67111644:- . NA TCGA-DX-A6BF-01A-11R-A30C-07 MYRFL-BEST3 2 2 chr12:69855370:+ chr12:69643787:- INFRAME NA TCGA-DX-A6BF-01A-11R-A30C-07 LRIG3-FRS2 1 3 chr12:58913982:- chr12:69530865:+ . NA TCGA-DX-A6BG-01A-11R-A30C-07 CCT2-CACNG3 248 760 chr12:69585524:+ chr16:24361352:+ FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 HMGA2-DAB1 172 439 chr12:65838569:+ chr1:56998128:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 ZFC3H1-ITGB6 48 199 chr12:71610180:- chr2:160142071:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 FRS2-ZFC3H1 2 282 chr12:69532056:+ chr12:71611887:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 TIPRL-EFL1 27 145 chr1:168179181:+ chr15:82163984:- FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 DCAF6-PIGC 6 160 chr1:167987608:+ chr1:172394410:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 DNM3-CD247 20 95 chr1:172131288:+ chr1:167440767:- FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 OSMR-DNM3 12 92 chr5:38869117:+ chr1:172081832:+ FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 UHRF1BP1L-TSFM 15 73 chr12:100128580:- chr12:57796177:+ . NA TCGA-DX-A6BG-01A-11R-A30C-07 MPC2-DNM3 10 28 chr1:167935733:- chr1:172387133:+ FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 MPC2-NUDT12 5 34 chr1:167935733:- chr5:103560254:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 FGGY-GOLGA2P5 2 35 chr1:59378837:+ chr12:100159968:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 METTL25-CPM 5 18 chr12:82456820:+ chr12:68932840:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 MYLK-VAMP4 6 9 chr3:123793677:- chr1:171710814:- FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 AGAP2-CNOT2 4 8 chr12:57731366:- chr12:70335438:+ INFRAME NA TCGA-DX-A6BG-01A-11R-A30C-07 TOP1-LYZ 3 8 chr20:41101353:+ chr12:69350108:+ FRAMESHIFT Likely Oncogenic NA TCGA-DX-A6BG-01A-11R-A30C-07 TBC1D15-CNOT2 3 7 chr12:71896780:+ chr12:70337389:+ FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 ZEB1-SYT1 3 7 chr10:31319292:+ chr12:78864998:+ . NA TCGA-DX-A6BG-01A-11R-A30C-07 SFT2D2-GPR161 1 9 chr1:168226142:+ chr1:168104894:- FRAMESHIFT NA TCGA-DX-A6BG-01A-11R-A30C-07 GPR161-EFL1 1 5 chr1:168136010:- chr15:82230971:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 CNOT2-LINGO1 1 4 chr12:70243480:+ chr15:77735053:- . NA TCGA-DX-A6BG-01A-11R-A30C-07 UHRF1BP1L-CACNG3 1000 1000 chr12:100142592:- chr16:24361352:+ FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 SRI-PIP4K2C 256 545 chr7:88210882:- chr12:57594025:+ INFRAME NA TCGA-DX-A6BH-01A-12R-A30C-07 LAMB1-SELE 84 147 chr7:107962905:- chr1:169734123:- . NA TCGA-DX-A6BH-01A-12R-A30C-07 CADPS2-ATP23 23 219 chr7:122885999:- chr12:57951758:+ INFRAME NA TCGA-DX-A6BH-01A-12R-A30C-07 FRS2-RFWD2 15 210 chr12:69470530:+ chr1:176027688:- . NA TCGA-DX-A6BH-01A-12R-A30C-07 FRS2-AKAP12 32 107 chr12:69532056:+ chr6:151305747:+ . NA TCGA-DX-A6BH-01A-12R-A30C-07 AASS-DNM3 15 67 chr7:122091703:- chr1:172131175:+ INFRAME NA TCGA-DX-A6BH-01A-12R-A30C-07 TNFAIP3-IL26 16 55 chr6:137871522:+ chr12:68202083:- FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 CPSF6-GRM8 14 27 chr12:69262562:+ chr7:127106712:- FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 TRERF1-ADGRF2 14 27 chr6:42451177:- chr6:47673391:+ . NA TCGA-DX-A6BH-01A-12R-A30C-07 PLAGL1-MYRFL 1 69 chr6:143960473:- chr12:69955363:+ . NA TCGA-DX-A6BH-01A-12R-A30C-07 RFWD2-GRM1 10 25 chr1:176184633:- chr6:146352250:+ FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 AKAP12-CCND3 8 17 chr6:151240724:+ chr6:41940585:- INFRAME NA TCGA-DX-A6BH-01A-12R-A30C-07 PLAGL1-CPM 6 22 chr6:143960469:- chr12:68957678:- . NA TCGA-DX-A6BH-01A-12R-A30C-07 DLD-SHPRH 4 21 chr7:107902393:+ chr6:145864491:- FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 FOXP2-EPM2A 3 24 chr7:114163088:+ chr6:145502575:- . NA TCGA-DX-A6BH-01A-12R-A30C-07 DNM3-SHISA9 2 20 chr1:172253682:+ chr16:13235030:+ FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 AASS-ADGRF2 3 15 chr7:122113118:- chr6:47680206:+ INFRAME NA TCGA-DX-A6BH-01A-12R-A30C-07 REPS1-KCNMB4 2 8 chr6:138920215:- chr12:70400209:+ FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 ARFGEF3-RFWD2 2 6 chr6:138242994:+ chr1:176176007:- FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 ARFGEF3-MED20 2 4 chr6:138242994:+ chr6:41909522:- INFRAME NA TCGA-DX-A6BH-01A-12R-A30C-07 UTRN-LAMB4 1000 1000 chr6:144448769:+ chr7:108037595:- FRAMESHIFT NA TCGA-DX-A6BH-01A-12R-A30C-07 FRS2-AHCYL2 1000 1000 chr12:69574085:+ chr7:129379641:+ INFRAME NA TCGA-DX-A6YQ-01A-12R-A33J-07 SENP3-ARHGAP27 11 86 chr17:7571649:+ chr17:45395201:- . NA TCGA-DX-A6YQ-01A-12R-A33J-07 RGS17-PDLIM5 5 49 chr6:153043900:- chr4:94662422:+ FRAMESHIFT NA TCGA-DX-A6YQ-01A-12R-A33J-07 DNAAF5-LAMA5 5 30 chr7:729847:+ chr20:62311094:- FRAMESHIFT NA TCGA-DX-A6YQ-01A-12R-A33J-07 FBLN7-ALOXE3 3 6 chr2:112185339:+ chr17:8109254:- INFRAME NA TCGA-DX-A6YQ-01A-12R-A33J-07 MED26-ABHD8 3 4 chr19:16627872:- chr19:17301624:- FRAMESHIFT NA TCGA-DX-A6YQ-01A-12R-A33J-07 MYO9B-CPAMD8 2 4 chr19:17206152:+ chr19:16980686:- FRAMESHIFT NA TCGA-DX-A6YQ-01A-12R-A33J-07 DDA1-TMEM38A 2 3 chr19:17314389:+ chr19:16679984:+ INFRAME NA TCGA-DX-A6YR-01A-33R-A355-07 USP38-RIT2 23 69 chr4:143187961:+ chr18:42743720:- INFRAME NA TCGA-DX-A6YR-01A-33R-A355-07 HMBOX1-MCM3 19 54 chr8:28890678:+ chr6:52269226:- . NA TCGA-DX-A6YR-01A-33R-A355-07 UBQLN1-NLRP5 6 20 chr9:83677727:- chr19:56020375:+ INFRAME NA TCGA-DX-A6YR-01A-33R-A355-07 ICK-GSTA9P 5 20 chr6:53041136:- chr6:52940016:- . NA TCGA-DX-A6YR-01A-33R-A355-07 NRIP1-DSCAM 6 9 chr21:15014344:- chr21:40084006:- . NA TCGA-DX-A6YR-01A-33R-A355-07 PBX1-RFWD2 3 12 chr1:164563311:+ chr1:175989479:- INFRAME NA TCGA-DX-A6YR-01A-33R-A355-07 FAM98A-BRE 2 13 chr2:33595489:- chr2:28241323:+ FRAMESHIFT NA TCGA-DX-A6YR-01A-33R-A355-07 GRID1-AFAP1L2 2 5 chr10:86363941:- chr10:114340731:- INFRAME NA TCGA-DX-A6YR-01A-33R-A355-07 TTC28-PIWIL3 1 9 chr22:28679622:- chr22:24719588:- INFRAME NA TCGA-DX-A6YR-01A-33R-A355-07 GOLIM4-WDR49 1 5 chr3:168095099:- chr3:167576151:- FRAMESHIFT NA TCGA-DX-A6YR-01A-33R-A355-07 PPP6R2-AURKC 1 5 chr22:50423614:+ chr19:57231742:+ FRAMESHIFT NA TCGA-DX-A6YS-01A-12R-A355-07 ADAMTS5-CYYR1 36 50 chr21:26943380:- chr21:26480429:- FRAMESHIFT NA TCGA-DX-A6YS-01A-12R-A355-07 SEPT11-TMEM196 15 13 chr4:77020818:+ chr7:19719879:- . NA TCGA-DX-A6YS-01A-12R-A355-07 APPBP2-SETD2 10 18 chr17:60494466:- chr3:47019840:- FRAMESHIFT Likely Oncogenic NA TCGA-DX-A6YS-01A-12R-A355-07 CD36-ELMO1 9 6 chr7:80487781:+ chr7:37133234:- . NA TCGA-DX-A6YS-01A-12R-A355-07 GRB10-SCMH1 8 4 chr7:50614770:- chr1:41028726:- FRAMESHIFT NA TCGA-DX-A6YS-01A-12R-A355-07 EXO5-MTF1 2 16 chr1:40508877:+ chr1:37857709:- . NA TCGA-DX-A6YS-01A-12R-A355-07 EIF5-CTAGE5 5 3 chr14:103341125:+ chr14:39326864:+ . NA TCGA-DX-A6YS-01A-12R-A355-07 ATP5L-ARCN1 2 10 chr11:118401717:+ chr11:118581246:+ FRAMESHIFT NA TCGA-DX-A6YS-01A-12R-A355-07 MBNL2-MADD 1 10 chr13:97276409:+ chr11:47308591:+ INFRAME NA TCGA-DX-A6YS-01A-12R-A355-07 STX5-TAF6L 1 5 chr11:62824166:- chr11:62775771:+ . NA TCGA-DX-A6YS-01A-12R-A355-07 UPRT-GPR141 1 3 chrX:75299896:+ chr7:37729916:+ . NA TCGA-DX-A6YT-01A-21R-A355-07 RBM25-ACOT6 15 96 chr14:73083551:+ chr14:73616990:+ . NA TCGA-DX-A6YT-01A-21R-A355-07 STXBP6-ZNF410 17 38 chr14:24974665:- chr14:73903960:+ INFRAME NA TCGA-DX-A6YT-01A-21R-A355-07 ZCCHC4-SMIM20 8 14 chr4:25315400:+ chr4:25928313:+ FRAMESHIFT NA TCGA-DX-A6YT-01A-21R-A355-07 UTP6-SLC13A5 4 5 chr17:31892260:- chr17:6707156:- FRAMESHIFT NA TCGA-DX-A6YT-01A-21R-A355-07 ACOT2-ZNF320 1 6 chr14:73569883:+ chr19:52881983:- INFRAME NA TCGA-DX-A6YU-01A-12R-A33J-07 MAN2A1-HTR4 1 18 chr5:109789527:+ chr5:148451272:- INFRAME NA TCGA-DX-A6YV-01A-12R-A355-07 IFI16-UAP1 20 98 chr1:159016700:+ chr1:162576777:+ FRAMESHIFT NA TCGA-DX-A6YV-01A-12R-A355-07 GLI2-SPOP 6 123 chr2:120927466:+ chr17:49622876:- . Likely Oncogenic NA TCGA-DX-A6YV-01A-12R-A355-07 URI1-RHPN2 7 19 chr19:29942664:+ chr19:32994053:- FRAMESHIFT NA TCGA-DX-A6YV-01A-12R-A355-07 PHC2-MFSD11 4 13 chr1:33349597:- chr17:76767386:+ . NA TCGA-DX-A6YV-01A-12R-A355-07 GRK6-B4GALT7 4 12 chr5:177426897:+ chr5:177607302:+ FRAMESHIFT NA TCGA-DX-A6YV-01A-12R-A355-07 MYH10-FXR2 5 8 chr17:8487433:- chr17:7592894:- FRAMESHIFT NA TCGA-DX-A6YV-01A-12R-A355-07 CSTF1-MED13 3 6 chr20:56403798:+ chr17:61972888:- . NA TCGA-DX-A6YX-01A-11R-A41I-07 BOP1-NECAB1 38 88 chr8:144276224:- chr8:90801691:+ INFRAME NA TCGA-DX-A6YX-01A-11R-A41I-07 ZFHX4-TRAM1 9 54 chr8:76778439:+ chr8:70575005:- INFRAME NA TCGA-DX-A6YZ-01A-12R-A355-07 USP8-TSPAN3 41 97 chr15:50471795:+ chr15:77056255:- INFRAME NA TCGA-DX-A6YZ-01A-12R-A355-07 SEC23B-NAPB 4 3 chr20:18507990:+ chr20:23381317:- . NA TCGA-DX-A6YZ-01A-12R-A355-07 TNRC6B-SEMA6D 3 4 chr22:40156182:+ chr15:47470474:+ . NA TCGA-DX-A6Z0-01A-13R-A36F-07 PTPRS-ZNF627 5 23 chr19:5274199:- chr19:11614527:+ INFRAME NA TCGA-DX-A6Z0-01A-13R-A36F-07 NRK-NAP1L4P2 5 14 chrX:105831119:+ chrX:106466688:- . NA TCGA-DX-A6Z0-01A-13R-A36F-07 TMEM135-HK1 4 3 chr11:87157406:+ chr10:69398595:+ FRAMESHIFT NA TCGA-DX-A6Z0-01A-13R-A36F-07 TSPAN18-TEX13B 2 4 chr11:44860469:+ chrX:107982159:- . NA TCGA-DX-A6Z2-01A-12R-A36F-07 TBC1D2B-INTS4 9 64 chr15:77998195:- chr11:77883952:- FRAMESHIFT NA TCGA-DX-A7EF-01A-11R-A33J-07 TRIO-TERT 9 62 chr5:14420021:+ chr5:1282624:- INFRAME NA TCGA-DX-A7EF-01A-11R-A33J-07 PRMT7-EXOC4 8 27 chr16:68346280:+ chr7:133895599:+ INFRAME NA TCGA-DX-A7EF-01A-11R-A33J-07 RNMT-SNCAIP 11 5 chr18:13726729:+ chr5:122440629:+ . NA TCGA-DX-A7EF-01A-11R-A33J-07 TP53-PXDNL 3 5 chr17:7674181:- chr8:51654760:- INFRAME Likely Oncogenic NA TCGA-DX-A7EF-01A-11R-A33J-07 CEP72-CDH9 1 10 chr5:639224:+ chr5:26902729:- FRAMESHIFT NA TCGA-DX-A7EF-01A-11R-A33J-07 HERC2P2-CACNA2D1 1 6 chr15:22579723:+ chr7:82335251:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 FRS2-PARP1 139 601 chr12:69470530:+ chr1:226370517:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 MRPL42-FGD6 164 252 chr12:93487660:+ chr12:95081556:- INFRAME NA TCGA-DX-A7EI-01A-11R-A33J-07 LSM14A-TMTC2 58 364 chr19:34209051:+ chr12:83132210:+ FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 CTDSP2-LSM14A 100 187 chr12:57846372:- chr19:34208929:+ INFRAME NA TCGA-DX-A7EI-01A-11R-A33J-07 FRS2-TBK1 39 231 chr12:69470530:+ chr12:64466901:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 EEA1-HOTAIR 28 215 chr12:92929043:- chr12:53968756:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 PRICKLE1-LRIG3 45 93 chr12:42589465:- chr12:58890796:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 CTDSP2-TMTC2 5 79 chr12:57846372:- chr12:83132210:+ FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 NR2C1-BCL7A 16 35 chr12:95067331:- chr12:122030700:+ FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 KIF5A-NAV3 12 24 chr12:57583215:+ chr12:78200473:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 FBXL7-CDH10 5 37 chr5:15616072:+ chr5:24593613:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 DISC1-MDM1 9 17 chr1:231818517:+ chr12:68321628:- FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 PAWR-MARC1 8 21 chr12:79689729:- chr1:220796643:+ INFRAME NA TCGA-DX-A7EI-01A-11R-A33J-07 SDHAF1-TSPAN8 7 25 chr19:35995708:+ chr12:71132824:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 MARC1-VPS33A 9 16 chr1:220798014:+ chr12:122264199:- INFRAME NA TCGA-DX-A7EI-01A-11R-A33J-07 FAM105A-AR 6 8 chr5:14609017:+ chrX:67728674:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 NAV3-SLC25A27 4 15 chr12:77325214:+ chr6:46668709:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 ARFGEF1-SHC1 4 12 chr8:67299209:- chr1:154970199:- INFRAME NA TCGA-DX-A7EI-01A-11R-A33J-07 NCAM2-PAWR 5 7 chr21:21374013:+ chr12:79668408:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 NAV1-CPM 3 13 chr1:201740076:+ chr12:68885889:- FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 VPS33A-GLTSCR1L 4 8 chr12:122232326:- chr6:42855856:+ FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 ITGA11-NBPF13P 2 10 chr15:68339500:- chr1:147099893:- . NA TCGA-DX-A7EI-01A-11R-A33J-07 MEF2D-CD55 3 4 chr1:156500486:- chr1:207359546:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 TRIP13-GPATCH2 2 7 chr5:914577:+ chr1:217431365:- FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 COL1A1-VIM 1 8 chr17:50194130:- chr10:17236294:+ FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 CYP39A1-VPS33A 1 8 chr6:46630963:- chr12:122261447:- FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 PMEPA1-COX6B1 1 8 chr20:57711324:- chr19:35654571:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 LGR5-PPFIA2 1 5 chr12:71535186:+ chr12:81457866:- FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 TAF1A-RRP15 1 5 chr1:222589727:- chr1:218330948:+ . NA TCGA-DX-A7EI-01A-11R-A33J-07 ACSS3-CYP39A1 1000 1000 chr12:81078431:+ chr6:46550437:- FRAMESHIFT NA TCGA-DX-A7EI-01A-11R-A33J-07 SLC38A2-RAB3IP 1000 1000 chr12:46372509:- chr12:69784720:+ . NA TCGA-DX-A7EL-01A-12R-A36F-07 CARMN-ARHGEF37 3 39 chr5:149431624:+ chr5:149618861:+ . NA TCGA-DX-A7EN-01A-11R-A39D-07 ZNF540-ZNF536 2 8 chr19:37601105:+ chr19:30710757:+ INFRAME NA TCGA-DX-A7EN-01A-11R-A39D-07 ZC3H3-TRAPPC9 2 6 chr8:143536257:- chr8:140451383:- FRAMESHIFT NA TCGA-DX-A7EN-01A-11R-A39D-07 PHIP-MYO6 2 4 chr6:79060478:- chr6:75817501:+ . NA TCGA-DX-A7EO-01A-11R-A36F-07 SS18-SSX2 40 53 chr18:26032399:- chrX:52700578:- INFRAME NA TCGA-DX-A7ER-01A-11R-A36F-07 SS18-SSX2 33 44 chr18:26032399:- chrX:52700578:- INFRAME NA TCGA-DX-A7ES-01A-31R-A39D-07 CAND1-IL22 46 180 chr12:67292776:+ chr12:68248876:- FRAMESHIFT NA TCGA-DX-A7ES-01A-31R-A39D-07 PSMB7-NR6A1 21 88 chr9:124405317:- chr9:124554570:- INFRAME NA TCGA-DX-A7ET-01A-11R-A36F-07 SULF1-TERF1 2 19 chr8:69621251:+ chr8:73045961:+ FRAMESHIFT NA TCGA-DX-A8BG-01A-12R-A41I-07 STAT1-SUMO1 300 427 chr2:190974830:- chr2:202210806:- INFRAME NA TCGA-DX-A8BG-01A-12R-A41I-07 AATF-AP2B1 19 46 chr17:36953907:+ chr17:35710234:+ INFRAME NA TCGA-DX-A8BG-01A-12R-A41I-07 PDGFA-GET4 7 18 chr7:518939:- chr7:886056:+ FRAMESHIFT NA TCGA-DX-A8BG-01A-12R-A41I-07 OGFOD3-TTC25 2 21 chr17:82415398:- chr17:41961382:+ FRAMESHIFT NA TCGA-DX-A8BG-01A-12R-A41I-07 FER-COMMD10 3 9 chr5:108835807:+ chr5:116291517:+ FRAMESHIFT NA TCGA-DX-A8BG-01A-12R-A41I-07 DYM-CFAP53 1 13 chr18:49097402:- chr18:50227609:- FRAMESHIFT NA TCGA-DX-A8BG-01A-12R-A41I-07 AGO3-ISG20 1 3 chr1:36009594:+ chr15:88639343:+ . NA TCGA-DX-A8BH-01A-11R-A37L-07 MFSD1-CLDN11 152 544 chr3:158814067:+ chr3:170754389:+ . NA TCGA-DX-A8BH-01A-11R-A37L-07 RNF38-CCL19 26 32 chr9:36487308:- chr9:34690342:- . NA TCGA-DX-A8BH-01A-11R-A37L-07 DLG1-FAIM 3 37 chr3:197194425:- chr3:138621407:+ FRAMESHIFT NA TCGA-DX-A8BH-01A-11R-A37L-07 MFSD1-SPTSSB 4 5 chr3:158814067:+ chr3:161359894:- . NA TCGA-DX-A8BH-01A-11R-A37L-07 ZCCHC7-UNC13B 2 9 chr9:37126942:+ chr9:35366947:+ FRAMESHIFT NA TCGA-DX-A8BJ-01A-11R-A41I-07 PALLD-ANXA10 1 11 chr4:168631900:+ chr4:168162528:+ . NA TCGA-DX-A8BJ-01A-11R-A41I-07 ZNF16-PLEKHA4 2 4 chr8:144946011:- chr19:48852326:- FRAMESHIFT NA TCGA-DX-A8BK-01A-11R-A37L-07 PDZD4-CMC4 9 27 chrX:153830239:- chrX:155064033:- . NA TCGA-DX-A8BK-01A-11R-A37L-07 PDZD4-MTCP1 9 27 chrX:153830239:- chrX:155064033:- . NA TCGA-DX-A8BK-01A-11R-A37L-07 EHD4-TEX41 3 7 chr15:41972259:- chr2:145182204:+ . NA TCGA-DX-A8BK-01A-11R-A37L-07 ATRX-CRACR2A 2 10 chrX:77785982:- chr12:3713317:- . Likely Oncogenic NA TCGA-DX-A8BK-01A-11R-A37L-07 MTUS2-SIRT7 2 4 chr13:29480364:+ chr17:81917967:- INFRAME NA TCGA-DX-A8BK-01A-11R-A37L-07 URI1-CHD4 1 6 chr19:29986417:+ chr12:6573269:- FRAMESHIFT NA TCGA-DX-A8BL-01A-11R-A41I-07 MAP4-RBM42 28 157 chr3:47914817:- chr19:35633098:+ INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 ZNF226-EIF3K 11 122 chr19:44165807:+ chr19:38620337:+ . NA TCGA-DX-A8BL-01A-11R-A41I-07 HAUS8-QTRT1 5 106 chr19:17073274:- chr19:10712161:+ INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 COPE-TMED1 9 27 chr19:18912984:- chr19:10835353:- INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 CCDC50-LSAMP 6 28 chr3:191370036:+ chr3:116444955:- INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 CLEC3B-POMGNT2 2 36 chr3:45030925:+ chr3:43081536:- . NA TCGA-DX-A8BL-01A-11R-A41I-07 KDM6A-SSX1 4 13 chrX:44873987:+ chrX:48257222:+ . Likely Oncogenic NA TCGA-DX-A8BL-01A-11R-A41I-07 SCAP-FAM198A 3 15 chr3:47435008:- chr3:43032267:+ INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 ARID3A-RFX2 4 4 chr19:929277:+ chr19:6093947:- . NA TCGA-DX-A8BL-01A-11R-A41I-07 GATAD2A-KXD1 2 10 chr19:19406019:+ chr19:18562036:+ . NA TCGA-DX-A8BL-01A-11R-A41I-07 TMEM161A-TIMM44 3 3 chr19:19130156:- chr19:7935145:- FRAMESHIFT NA TCGA-DX-A8BL-01A-11R-A41I-07 HIVEP2-RSPO3 2 3 chr6:142945944:- chr6:127148648:+ . NA TCGA-DX-A8BL-01A-11R-A41I-07 PGPEP1-GTF2F1 1 6 chr19:18356011:+ chr19:6389637:- INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 SUGP1-TMEM221 1 5 chr19:19296989:- chr19:17436927:- INFRAME NA TCGA-DX-A8BL-01A-11R-A41I-07 PKIG-TOP1 1 2 chr20:44598890:+ chr20:41112782:+ . Likely Oncogenic NA TCGA-DX-A8BM-01A-11R-A41I-07 ZNF586-AATF 48 310 chr19:57769878:+ chr17:37056601:+ FRAMESHIFT NA TCGA-DX-A8BM-01A-11R-A41I-07 ZNF704-RPS18 28 88 chr8:80873544:- chr6:33272628:+ . NA TCGA-DX-A8BM-01A-11R-A41I-07 SNRNP70-CTNNA2 13 52 chr19:49090520:+ chr2:79339720:+ . NA TCGA-DX-A8BM-01A-11R-A41I-07 SEPT10-LRCH1 10 23 chr2:109585721:- chr13:46681741:+ FRAMESHIFT NA TCGA-DX-A8BM-01A-11R-A41I-07 PMP22-TEKT3 9 20 chr17:15239471:- chr17:15304152:- INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 SPPL2A-FAM81A 3 35 chr15:50765468:- chr15:59492271:+ INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 TRIO-CTNNA2 5 19 chr5:14336727:+ chr2:79293187:+ . NA TCGA-DX-A8BM-01A-11R-A41I-07 TUBGCP2-SORBS1 5 12 chr10:133297952:- chr10:95384285:- INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 ITGA11-ADAMTSL3 3 16 chr15:68313779:- chr15:83961573:+ . NA TCGA-DX-A8BM-01A-11R-A41I-07 ATP1B2-SLC37A3 2 10 chr17:7651630:+ chr7:140337349:- INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 ZNF511-PLPP4 3 5 chr10:133311841:+ chr10:120503818:+ INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 CORO2B-APH1B 3 4 chr15:68719552:+ chr15:63279161:+ INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 RASAL2-RHBDF1 3 4 chr1:178300118:+ chr16:65039:- . NA TCGA-DX-A8BM-01A-11R-A41I-07 PTPN9-SLC12A1 2 5 chr15:75578714:- chr15:48249575:+ FRAMESHIFT NA TCGA-DX-A8BM-01A-11R-A41I-07 MREG-DNAH2 1 8 chr2:216013233:- chr17:7830300:+ FRAMESHIFT NA TCGA-DX-A8BM-01A-11R-A41I-07 NIPBL-SPEF2 2 3 chr5:36976402:+ chr5:35628460:+ INFRAME NA TCGA-DX-A8BM-01A-11R-A41I-07 RANBP2-RAPGEF4 2 2 chr2:108719678:+ chr2:172795025:+ FRAMESHIFT NA TCGA-DX-A8BM-01A-11R-A41I-07 BBS9-ALG6 1 2 chr7:33155702:+ chr1:63370771:+ . NA TCGA-DX-A8BN-01A-11R-A37L-07 IL4R-ACMSD 2 402 chr16:27314020:+ chr2:134898341:+ . NA TCGA-DX-A8BN-01A-11R-A37L-07 KIAA0355-SLC7A9 28 82 chr19:34349153:+ chr19:32833323:- FRAMESHIFT NA TCGA-DX-A8BN-01A-11R-A37L-07 NAA38-ITFG1 15 43 chr17:7883235:- chr16:47375940:- . NA TCGA-DX-A8BN-01A-11R-A37L-07 METTL22-ITFG1 11 25 chr16:8647790:+ chr16:47375940:- . NA TCGA-DX-A8BN-01A-11R-A37L-07 ZNF771-VKORC1 1 6 chr16:30408194:+ chr16:31093482:- FRAMESHIFT NA TCGA-DX-A8BN-01A-11R-A37L-07 UBA2-LRP3 1 5 chr19:34467014:+ chr19:33196730:+ INFRAME NA TCGA-DX-A8BN-01A-11R-A37L-07 MTMR3-HORMAD2 1000 1000 chr22:30013473:+ chr22:30080174:+ . NA TCGA-DX-A8BO-01A-11R-A41I-07 FLCN-COPS3 2 7 chr17:17236912:- chr17:17249039:- . NA TCGA-DX-A8BR-01A-11R-A41I-07 AGAP3-EXOSC9 38 106 chr7:151087072:+ chr4:121801827:+ FRAMESHIFT NA TCGA-DX-A8BR-01A-11R-A41I-07 NUP205-GIMAP8 2 22 chr7:135607371:+ chr7:150474012:+ FRAMESHIFT NA TCGA-DX-A8BR-01A-11R-A41I-07 FNIP2-EXOC4 2 16 chr4:158769319:+ chr7:133937891:+ INFRAME NA TCGA-DX-A8BR-01A-11R-A41I-07 SPCS3-SKAP2 1 20 chr4:176324257:+ chr7:26690362:- FRAMESHIFT NA TCGA-DX-A8BR-01A-11R-A41I-07 OSBPL3-AOC1 1 19 chr7:24979886:- chr7:150856455:+ . NA TCGA-DX-A8BR-01A-11R-A41I-07 SGSM3-PPP6R2 2 11 chr22:40370688:+ chr22:50432265:+ . NA TCGA-DX-A8BR-01A-11R-A41I-07 GRID2-TRPC2 3 6 chr4:93085279:+ chr11:3609904:+ . NA TCGA-DX-A8BR-01A-11R-A41I-07 ARHGAP5-DLEU7 2 6 chr14:32117287:+ chr13:50713240:- FRAMESHIFT NA TCGA-DX-A8BR-01A-11R-A41I-07 CCDC14-RNF212B 2 6 chr3:123931102:- chr14:23193325:+ . NA TCGA-DX-A8BR-01A-11R-A41I-07 NUP98-AKR1C7P 1 9 chr11:3679554:- chr10:5286012:- . NA TCGA-DX-A8BR-01A-11R-A41I-07 HECTD1-NSUN3 1 8 chr14:31148721:- chr3:94081609:+ . NA TCGA-DX-A8BR-01A-11R-A41I-07 OSBPL3-TMEM176A 2 4 chr7:24979886:- chr7:150804827:+ . NA TCGA-DX-A8BR-01A-11R-A41I-07 EEFSEC-CD96 2 3 chr3:128264781:+ chr3:111567523:+ FRAMESHIFT NA TCGA-DX-A8BR-01A-11R-A41I-07 BCL9-DCAF6 1 3 chr1:147612977:+ chr1:168019545:+ INFRAME NA TCGA-DX-A8BT-01A-11R-A37L-07 DOCK1-STK32C 26 90 chr10:126905563:+ chr10:132245955:- INFRAME NA TCGA-DX-A8BT-01A-11R-A37L-07 NSD2-FBN1 8 20 chr4:1904378:+ chr15:48422068:- INFRAME NA TCGA-DX-A8BT-01A-11R-A37L-07 TP53-PFKL 7 20 chr17:7687377:- chr21:44306681:+ . Likely Oncogenic NA TCGA-DX-A8BT-01A-11R-A37L-07 CENPI-LANCL3 5 24 chrX:101148161:+ chrX:37655688:+ INFRAME NA TCGA-DX-A8BT-01A-11R-A37L-07 IDH3A-DHX32 2 10 chr15:78160206:+ chr10:125838387:- FRAMESHIFT NA TCGA-DX-A8BT-01A-11R-A37L-07 BRMS1L-NPAS3 1 5 chr14:35834923:+ chr14:33560121:+ INFRAME NA TCGA-DX-A8BU-01A-11R-A37L-07 ZNF224-CYP2S1 11 56 chr19:44097888:+ chr19:41205958:+ INFRAME NA TCGA-DX-A8BU-01A-11R-A37L-07 SAE1-HAS1 9 52 chr19:47131028:+ chr19:51719895:- FRAMESHIFT NA TCGA-DX-A8BU-01A-11R-A37L-07 TEAD3-ZFAND3 9 24 chr6:35496898:- chr6:38116572:+ . NA TCGA-DX-A8BU-01A-11R-A37L-07 NFKB1-BANK1 5 18 chr4:102594981:+ chr4:102063075:+ FRAMESHIFT NA TCGA-DX-A8BU-01A-11R-A37L-07 TGFBRAP1-DPP10 3 12 chr2:105296356:- chr2:114707117:+ . NA TCGA-DX-A8BU-01A-11R-A37L-07 AFF1-GPRIN3 2 14 chr4:87007424:+ chr4:89250233:- . NA TCGA-DX-A8BU-01A-11R-A37L-07 LSM14A-ZNF221 2 14 chr19:34196763:+ chr19:43962725:+ . NA TCGA-DX-A8BU-01A-11R-A37L-07 KIF13A-UBE2K 3 8 chr6:17987054:- chr4:39774834:+ INFRAME NA TCGA-DX-A8BU-01A-11R-A37L-07 LDLRAD3-DEPDC7 2 12 chr11:36098461:+ chr11:33033262:+ INFRAME NA TCGA-DX-A8BU-01A-11R-A37L-07 HM13-DLGAP4 1 9 chr20:31527582:+ chr20:36442727:+ INFRAME NA TCGA-DX-A8BU-01A-11R-A37L-07 SVIL-STAM 1 8 chr10:29657969:- chr10:17660464:+ . NA TCGA-DX-A8BU-01A-11R-A37L-07 PDLIM5-STPG2 1 5 chr4:94640450:+ chr4:97187833:- FRAMESHIFT NA TCGA-DX-A8BU-01A-11R-A37L-07 FECH-WDR7 1 3 chr18:57585864:- chr18:56962430:+ . NA TCGA-DX-A8BU-01A-11R-A37L-07 UQCC1-ASXL1 1 3 chr20:35347164:- chr20:32428128:+ INFRAME Likely Oncogenic NA TCGA-DX-A8BU-01A-11R-A37L-07 SMYD3-PIP 1 2 chr1:246507054:- chr7:143135194:+ INFRAME NA TCGA-DX-A8BV-01A-11R-A37L-07 DCLK1-CLDN10 2 28 chr13:36111869:- chr13:95560132:+ FRAMESHIFT NA TCGA-DX-A8BV-01A-11R-A37L-07 PLEKHM2-ECE1 1 28 chr1:15718625:+ chr1:21247363:- INFRAME NA TCGA-DX-A8BV-01A-11R-A37L-07 KDM5B-PPP1R12B 3 16 chr1:202773118:- chr1:202567778:+ INFRAME NA TCGA-DX-A8BV-01A-11R-A37L-07 ARID4B-KLHL12 2 6 chr1:235326914:- chr1:202925207:- INFRAME NA TCGA-DX-A8BV-01A-11R-A37L-07 TTC28-YPEL1 2 6 chr22:28629552:- chr22:21701218:- INFRAME NA TCGA-DX-A8BV-01A-11R-A37L-07 MRRF-NR4A1 1 3 chr9:122264938:+ chr12:52054327:+ . NA TCGA-DX-A8BX-01A-11R-A37L-07 TRIP12-ITM2C 22 53 chr2:229858772:- chr2:230873417:+ FRAMESHIFT NA TCGA-DX-A8BX-01A-11R-A37L-07 CAB39-RHBDD1 5 55 chr2:230760115:+ chr2:226995431:+ FRAMESHIFT NA TCGA-DX-A8BX-01A-11R-A37L-07 CCDC92-RPL7 11 16 chr12:123972529:- chr8:73292797:- . NA TCGA-DX-A8BX-01A-11R-A37L-07 ZFPM2-SLC27A2 11 16 chr8:105318981:+ chr15:50197500:+ INFRAME NA TCGA-DX-A8BX-01A-11R-A37L-07 HAUS2-TMPRSS12 6 18 chr15:42548965:+ chr12:50885246:+ FRAMESHIFT NA TCGA-DX-A8BX-01A-11R-A37L-07 RUSC2-TCAF1P1 10 0 chr9:35490172:+ chr7:143602774:+ . NA TCGA-DX-A8BX-01A-11R-A37L-07 RPL11-ARMC9 3 7 chr1:23694791:+ chr2:231360754:+ FRAMESHIFT NA TCGA-DX-A8BX-01A-11R-A37L-07 PAIP2-QKI 2 9 chr5:139364743:+ chr6:163563420:+ FRAMESHIFT NA TCGA-DX-A8BX-01A-11R-A37L-07 VPS13B-SPAG1 1 7 chr8:99275254:+ chr8:100191390:+ INFRAME NA TCGA-DX-A8BZ-01A-11R-A37L-07 DIAPH2-PLAC1 1 4 chrX:96758258:+ chrX:134602122:- . NA TCGA-DX-AATS-01A-12R-A41I-07 SENP6-ADGRB3 4 28 chr6:75602576:+ chr6:69354233:+ FRAMESHIFT NA TCGA-DX-AATS-01A-12R-A41I-07 AACS-ADGRA1 5 13 chr12:125091523:+ chr10:133131269:+ . NA TCGA-DX-AATS-01A-12R-A41I-07 ACSF3-ZNF483 5 9 chr16:89146049:+ chr9:111576365:+ FRAMESHIFT NA TCGA-DX-AATS-01A-12R-A41I-07 FAM120A-SUSD1 2 16 chr9:93527242:+ chr9:112041960:- INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 DLG1-WDR60 2 15 chr3:197081051:- chr7:158918740:+ INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 SS18-ZNF521 2 13 chr18:26087501:- chr18:25092081:- FRAMESHIFT NA TCGA-DX-AATS-01A-12R-A41I-07 FAM135A-GRM1 3 8 chr6:70502791:+ chr6:146027648:+ . NA TCGA-DX-AATS-01A-12R-A41I-07 DYM-OAS3 2 11 chr18:49460398:- chr12:112941570:+ . NA TCGA-DX-AATS-01A-12R-A41I-07 APP-MIR548XHG 1 14 chr21:25954590:- chr21:18589620:- . NA TCGA-DX-AATS-01A-12R-A41I-07 NFYC-FAF1 1 13 chr1:40691867:+ chr1:50491801:- . NA TCGA-DX-AATS-01A-12R-A41I-07 TRAK2-AP1S3 4 1 chr2:201420417:- chr2:223777869:- FRAMESHIFT NA TCGA-DX-AATS-01A-12R-A41I-07 UBR2-CDKAL1 1 12 chr6:42658824:+ chr6:20548593:+ INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 KDM4A-FAF1 3 3 chr1:43698013:+ chr1:50491801:- INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 NEO1-BBS4 2 6 chr15:73136027:+ chr15:72709700:+ INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 PTPA-MUSK 2 5 chr9:129142552:+ chr9:110747641:+ INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 HSPB8-INIP 2 4 chr12:119179679:+ chr9:112694233:- INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 CPS1-PLEKHM3 2 3 chr2:210616541:+ chr2:207828496:- INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 AK4-WLS 1 5 chr1:65148552:+ chr1:68159247:- INFRAME NA TCGA-DX-AATS-01A-12R-A41I-07 KLF7-PLEKHM3 1 4 chr2:207165467:- chr2:207828496:- FRAMESHIFT NA TCGA-DX-AATS-01A-12R-A41I-07 RFLNA-SH3BP4 1 4 chr12:123974020:+ chr2:234995303:+ . NA TCGA-DX-AATS-01A-12R-A41I-07 ZNF664-SH3BP4 1 4 chr12:123974020:+ chr2:234995303:+ . NA TCGA-DX-AATS-01A-12R-A41I-07 WDFY1-NYAP2 1 3 chr2:223945148:- chr2:225651432:+ FRAMESHIFT NA TCGA-DX-AATS-01A-12R-A41I-07 MFSD14A-SEC22B 1 2 chr1:100038316:+ chr1:120168949:- INFRAME NA TCGA-DX-AB2E-01A-11R-A39D-07 ANGPT1-TNFRSF11B 31 116 chr8:107497262:- chr8:118933300:- INFRAME NA TCGA-DX-AB2E-01A-11R-A39D-07 PLEC-JPH1 4 12 chr8:143938151:- chr8:74259503:- FRAMESHIFT NA TCGA-DX-AB2E-01A-11R-A39D-07 PVT1-SPATC1 1 22 chr8:127796008:+ chr8:144041232:+ . NA TCGA-DX-AB2E-01A-11R-A39D-07 MLLT3-BNC2 4 6 chr9:20620654:- chr9:16437524:- FRAMESHIFT NA TCGA-DX-AB2E-01A-11R-A39D-07 RAPGEF1-REXO4 4 6 chr9:131739770:- chr9:133412921:- FRAMESHIFT NA TCGA-DX-AB2E-01A-11R-A39D-07 BNC2-UHRF2 1 2 chr9:16870646:- chr9:6420912:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 ELK3-TSPAN8 191 1907 chr12:96194705:+ chr12:71282819:- . NA TCGA-DX-AB2F-01A-11R-A38C-07 OS9-COX7B 95 272 chr12:57696373:+ chrX:77899477:+ . NA TCGA-DX-AB2F-01A-11R-A38C-07 R3HDM2-RAP1B 38 136 chr12:57395749:- chr12:68648699:+ . NA TCGA-DX-AB2F-01A-11R-A38C-07 UHRF1BP1L-TRHDE 23 63 chr12:100142592:- chr12:72286681:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 LEMD3-KCNC2 18 78 chr12:65218619:+ chr12:75051317:- INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 NAV3-CYSLTR1 17 38 chr12:78059115:+ chrX:78327439:- . NA TCGA-DX-AB2F-01A-11R-A38C-07 FNDC3B-FGF12 11 50 chr3:172133546:+ chr3:192360538:- INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 CFAP54-NAV3 9 44 chr12:96598767:+ chr12:78146369:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 NAV3-CDH4 8 41 chr12:78159286:+ chr20:61894910:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 ZDHHC14-TSPAN8 6 27 chr6:157382266:+ chr12:71282819:- . NA TCGA-DX-AB2F-01A-11R-A38C-07 HIVEP2-MYRFL 6 22 chr6:142836935:- chr12:69926571:+ . NA TCGA-DX-AB2F-01A-11R-A38C-07 MDM2-FRS2 7 12 chr12:68824651:+ chr12:69530865:+ . NA TCGA-DX-AB2F-01A-11R-A38C-07 MAN1A1-MAGT1 7 8 chr6:119290683:- chrX:77830895:- FRAMESHIFT NA TCGA-DX-AB2F-01A-11R-A38C-07 SAMM50-PIP4K2C 6 9 chr22:43964553:+ chr12:57594025:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 FRS2-CFAP54 1 22 chr12:69532056:+ chr12:96540837:+ . NA TCGA-DX-AB2F-01A-11R-A38C-07 UST-PGK1 4 10 chr6:148964563:+ chrX:78096653:+ . NA TCGA-DX-AB2F-01A-11R-A38C-07 ATP7A-PTPRR 2 17 chrX:77910835:+ chr12:70639277:- . NA TCGA-DX-AB2F-01A-11R-A38C-07 LGR5-TSPAN8 1 14 chr12:71440292:+ chr12:71282819:- . NA TCGA-DX-AB2F-01A-11R-A38C-07 MAN1A1-COX7B 2 4 chr6:119290683:- chrX:77905184:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 TBC1D15-PDE10A 1 4 chr12:71880607:+ chr6:165396459:- FRAMESHIFT NA TCGA-DX-AB2F-01A-11R-A38C-07 PDE10A-DDX23 1 3 chr6:165661947:- chr12:48845782:- FRAMESHIFT NA TCGA-DX-AB2F-01A-11R-A38C-07 CCNY-FLT3LG 1 2 chr10:35337207:+ chr19:49476145:+ INFRAME NA TCGA-DX-AB2F-01A-11R-A38C-07 MROH1-PARP10 1 2 chr8:144200541:+ chr8:143986438:- . NA TCGA-DX-AB2G-01A-11R-A39D-07 SP1-NPFF 46 110 chr12:53383622:+ chr12:53507142:- FRAMESHIFT NA TCGA-DX-AB2G-01A-11R-A39D-07 OS9-YEATS4 31 114 chr12:57696373:+ chr12:69370706:+ INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 SP1-ATF7 18 120 chr12:53383622:+ chr12:53508027:- . NA TCGA-DX-AB2G-01A-11R-A39D-07 PPFIA2-KCNMB4 16 75 chr12:81325777:- chr12:70430485:+ INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 HMGA2-PCBP2 7 68 chr12:65838569:+ chr12:53462493:+ INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 SCN8A-FLJ12825 13 19 chr12:51591359:+ chr12:54118604:+ . NA TCGA-DX-AB2G-01A-11R-A39D-07 ATF1-PTPRR 12 14 chr12:50764307:+ chr12:70662605:- . NA TCGA-DX-AB2G-01A-11R-A39D-07 STAT6-PTPRQ 3 19 chr12:57104464:- chr12:80613592:+ FRAMESHIFT NA TCGA-DX-AB2G-01A-11R-A39D-07 TRIO-CDH18 2 18 chr5:14420021:+ chr5:19612601:- INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 LRP1-ATF1 2 16 chr12:57145490:+ chr12:50795909:+ INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 NTN4-LETMD1 4 7 chr12:95786939:- chr12:51056350:+ INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 MDM2-DIP2B 2 7 chr12:68813628:+ chr12:50660194:+ FRAMESHIFT NA TCGA-DX-AB2G-01A-11R-A39D-07 OS9-FRS2 2 6 chr12:57694323:+ chr12:69530865:+ . NA TCGA-DX-AB2G-01A-11R-A39D-07 OTOGL-ACSS3 2 5 chr12:80305695:+ chr12:81216901:+ FRAMESHIFT NA TCGA-DX-AB2G-01A-11R-A39D-07 CDH18-TERT 2 4 chr5:19612434:- chr5:1282624:- INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 ATP2B1-GRIP1 1 7 chr12:89603043:- chr12:66541950:- INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 PHACTR2-IL26 2 3 chr6:143678209:+ chr12:68202083:- FRAMESHIFT NA TCGA-DX-AB2G-01A-11R-A39D-07 SCN8A-PPFIA2 1 6 chr12:51751593:+ chr12:81457866:- INFRAME NA TCGA-DX-AB2G-01A-11R-A39D-07 METTL21B-METTL7A 1 5 chr12:57773128:+ chr12:50924667:+ . NA TCGA-DX-AB2H-01A-11R-A39D-07 MSRB3-CNOT2 339 1479 chr12:65278865:+ chr12:70335438:+ INFRAME NA TCGA-DX-AB2H-01A-11R-A39D-07 THAP2-YEATS4 217 361 chr12:71664580:+ chr12:69390147:+ FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 B4GALNT1-TSFM 37 251 chr12:57631915:- chr12:57792986:+ FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 ARHGEF25-CPNE8 51 177 chr12:57614400:+ chr12:38654070:- INFRAME NA TCGA-DX-AB2H-01A-11R-A39D-07 R3HDM2-KIF21A 32 81 chr12:57395749:- chr12:39311553:- . NA TCGA-DX-AB2H-01A-11R-A39D-07 ADSS-CAPRIN2 31 38 chr1:244415981:- chr12:30711629:- FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 HMGA2-OSBPL8 17 76 chr12:65963372:+ chr12:76487618:- . NA TCGA-DX-AB2H-01A-11R-A39D-07 DLG2-ATP23 8 35 chr11:84163461:- chr12:57945628:+ FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 SDK2-TMTC2 6 28 chr17:73379177:- chr12:82857010:+ FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 KCNMB4-MUC19 5 22 chr12:70400336:+ chr12:40493947:+ . NA TCGA-DX-AB2H-01A-11R-A39D-07 B3GALNT2-LBR 5 18 chr1:235470850:- chr1:225424089:- . NA TCGA-DX-AB2H-01A-11R-A39D-07 SCYL3-TSPAN8 3 18 chr1:169888676:- chr12:71157787:- . NA TCGA-DX-AB2H-01A-11R-A39D-07 TRHDE-SFSWAP 2 19 chr12:72575542:+ chr12:131764456:+ FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 THAP2-RAPGEF3 3 7 chr12:71664580:+ chr12:47751969:- FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 ZNF496-WIF1 2 10 chr1:247328683:- chr12:65077854:- FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 MYRFL-KCNMB4 1 13 chr12:69927748:+ chr12:70430485:+ FRAMESHIFT NA TCGA-DX-AB2H-01A-11R-A39D-07 MBD5-RAPGEF4 1 6 chr2:148021684:+ chr2:172996466:+ . NA TCGA-DX-AB2H-01A-11R-A39D-07 ZFC3H1-CDK4 1 6 chr12:71660289:- chr12:57751736:- . NA TCGA-DX-AB2H-01A-11R-A39D-07 DLG2-NELL2 1 3 chr11:84251238:- chr12:44881839:- . NA TCGA-DX-AB2O-01A-12R-A39D-07 SESTD1-FGGY 57 103 chr2:179264499:- chr1:59607803:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 DPYSL2-HMBOX1 28 108 chr8:26583983:+ chr8:28980071:+ FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 TBC1D14-EVC 37 55 chr4:6987349:+ chr4:5783552:+ INFRAME NA TCGA-DX-AB2O-01A-12R-A39D-07 STYX-DAD1 19 97 chr14:52759754:+ chr14:22565137:- FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 UBR4-C1QC 22 57 chr1:19121189:- chr1:22647227:+ INFRAME NA TCGA-DX-AB2O-01A-12R-A39D-07 RPRD1A-CHMP2B 12 51 chr18:36067254:- chr3:87245714:+ FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 INSR-CEP89 13 45 chr19:7267345:- chr19:32879378:- FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 HMBOX1-FSTL5 7 26 chr8:28980156:+ chr4:161587575:- FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 KIF5C-GULP1 7 25 chr2:149011683:+ chr2:188593940:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 EVC-ZDHHC2 4 27 chr4:5787624:+ chr8:17207960:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 DPYSL2-FSTL5 2 31 chr8:26583983:+ chr4:161587575:- FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 GNPTAB-CCDC60 5 18 chr12:101830559:- chr12:119488759:+ FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 PAK2-LPP 6 6 chr3:196740157:+ chr3:188760113:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 TAB2-KCNU1 5 9 chr6:149342833:+ chr8:36864404:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 MOK-C1orf141 3 5 chr14:102250812:- chr1:67131227:- . NA TCGA-DX-AB2O-01A-12R-A39D-07 FOXJ3-RCOR1 1 12 chr1:42265115:- chr14:102721007:+ INFRAME NA TCGA-DX-AB2O-01A-12R-A39D-07 NBPF26-C1orf137 1 12 chr1:120763709:+ chr1:116694759:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 GLI2-MARCO 2 7 chr2:120797468:+ chr2:118969160:+ INFRAME NA TCGA-DX-AB2O-01A-12R-A39D-07 RABIF-MKNK1 1 11 chr1:202888973:- chr1:46594280:- FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 TAB2-PAX7 2 7 chr6:149318015:+ chr1:18735632:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 GPR137C-LRFN5 3 2 chr14:52553591:+ chr14:41766854:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 VPS37A-WDR78 1 8 chr8:17247369:+ chr1:66871509:- INFRAME NA TCGA-DX-AB2O-01A-12R-A39D-07 NEDD1-GPHN 2 3 chr12:96907300:+ chr14:66965191:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 RNF10-DENR 2 3 chr12:120552698:+ chr12:122753693:+ . NA TCGA-DX-AB2O-01A-12R-A39D-07 TGFBRAP1-ARHGAP15 2 3 chr2:105269272:- chr2:143435601:+ INFRAME NA TCGA-DX-AB2O-01A-12R-A39D-07 KCTD8-WDR19 1 2 chr4:44447563:- chr4:39266063:+ FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 PEBP1-CCDC60 1 2 chr12:118139551:+ chr12:119488759:+ FRAMESHIFT NA TCGA-DX-AB2O-01A-12R-A39D-07 KAZN-SPATA9 1 1 chr1:14599223:+ chr5:95664048:- FRAMESHIFT NA TCGA-DX-AB2P-01A-11R-A38C-07 MYL12A-AKAIN1 16 100 chr18:3254050:+ chr18:5145755:- INFRAME NA TCGA-DX-AB2P-01A-11R-A38C-07 SEL1L-CHURC1 16 52 chr14:81484225:- chr14:64923991:+ INFRAME NA TCGA-DX-AB2P-01A-11R-A38C-07 SULF2-WFDC3 11 46 chr20:47736703:- chr20:45775602:- INFRAME NA TCGA-DX-AB2P-01A-11R-A38C-07 KAZN-PHGDH 4 17 chr1:14180592:+ chr1:119721170:+ INFRAME NA TCGA-DX-AB2P-01A-11R-A38C-07 PCCA-DNAJC3 2 8 chr13:100235878:+ chr13:95790873:+ INFRAME NA TCGA-DX-AB2Q-01A-11R-A39D-07 CELF1-XKR5 7 22 chr11:47472191:- chr8:6812339:- . NA TCGA-DX-AB2Q-01A-11R-A39D-07 NSD3-MIR99AHG 4 13 chr8:38318895:- chr21:16231056:+ . NA TCGA-DX-AB2Q-01A-11R-A39D-07 DNMBP-RFWD2 2 17 chr10:100009838:- chr1:176135086:- . NA TCGA-DX-AB2Q-01A-11R-A39D-07 BCAS3-SYTL2 3 6 chr17:61084564:+ chr11:85714507:- INFRAME NA TCGA-DX-AB2Q-01A-11R-A39D-07 CHD6-MYH7B 3 6 chr20:41440000:- chr20:34995336:+ FRAMESHIFT NA TCGA-DX-AB2Q-01A-11R-A39D-07 AXIN1-SYVN1 1 7 chr16:346148:- chr11:65133618:- . Likely Oncogenic NA TCGA-DX-AB2Q-01A-11R-A39D-07 LARGE1-EIF4ENIF1 1 2 chr22:33277060:- chr22:31444690:- FRAMESHIFT NA TCGA-DX-AB2Q-01A-11R-A39D-07 FCHSD2-FAM35A 1 1 chr11:72984088:- chr10:87175889:+ FRAMESHIFT NA TCGA-DX-AB2Q-01A-11R-A39D-07 ANKRD11-SYT15 1000 1000 chr16:89490245:- chr10:46580231:+ . NA TCGA-DX-AB2S-01A-11R-A39D-07 NIT1-C1orf105 81 244 chr1:161120232:+ chr1:172462178:+ INFRAME NA TCGA-DX-AB2S-01A-11R-A39D-07 DAP3-RPRD2 8 116 chr1:155725411:+ chr1:150464527:+ FRAMESHIFT NA TCGA-DX-AB2S-01A-11R-A39D-07 TSPAN8-IL26 5 26 chr12:71277351:- chr12:68202083:- . NA TCGA-DX-AB2S-01A-11R-A39D-07 ASH1L-RC3H1 3 13 chr1:155562153:- chr1:173993135:- . NA TCGA-DX-AB2S-01A-11R-A39D-07 MCL1-GRIP1 3 9 chr1:150578843:- chr12:66596927:- INFRAME NA TCGA-DX-AB2S-01A-11R-A39D-07 NAV3-PPFIA2 1 11 chr12:78159286:+ chr12:81445720:- INFRAME NA TCGA-DX-AB2S-01A-11R-A39D-07 CCT2-TSPAN8 1000 1000 chr12:69593103:+ chr12:71282819:- . NA TCGA-DX-AB2T-01A-11R-A38C-07 TP53-HIGD1B 22 176 chr17:7687377:- chr17:44848102:+ . Likely Oncogenic NA TCGA-DX-AB2T-01A-11R-A38C-07 CCNC-MICAL1 3 8 chr6:99568496:- chr6:109446772:- FRAMESHIFT NA TCGA-DX-AB2T-01A-11R-A38C-07 BCAT1-C1R 1 8 chr12:24878530:- chr12:7086457:- INFRAME NA TCGA-DX-AB2T-01A-11R-A38C-07 AKIRIN2-GAREM1 1 6 chr6:87701450:- chr18:32270383:- FRAMESHIFT NA TCGA-DX-AB2T-01A-11R-A38C-07 MOCOS-MEI4 1 6 chr18:36205276:+ chr6:77923089:+ INFRAME NA TCGA-DX-AB2T-01A-11R-A38C-07 TNXB-VIM 1 5 chr6:32048363:- chr10:17236294:+ INFRAME NA TCGA-DX-AB2T-01A-11R-A38C-07 CNTLN-RAB12 1 3 chr9:17143376:+ chr18:8624938:+ FRAMESHIFT NA TCGA-DX-AB2V-01A-11R-A41I-07 MAX-ACTN1 72 486 chr14:65093708:- chr14:68925672:- INFRAME NA TCGA-DX-AB2V-01A-11R-A41I-07 KIRREL-CD1C 24 115 chr1:157993728:+ chr1:158291134:+ INFRAME NA TCGA-DX-AB2V-01A-11R-A41I-07 RGL1-NMNAT2 9 28 chr1:183636501:+ chr1:183278629:- . NA TCGA-DX-AB2V-01A-11R-A41I-07 LY96-GDAP1 7 34 chr8:73991554:+ chr8:74488678:+ . NA TCGA-DX-AB2V-01A-11R-A41I-07 KIF26A-CEP170B 5 17 chr14:104139288:+ chr14:104893523:+ INFRAME NA TCGA-DX-AB2V-01A-11R-A41I-07 ARHGEF11-SHC1 2 5 chr1:157044299:- chr1:154970199:- FRAMESHIFT NA TCGA-DX-AB2V-01A-11R-A41I-07 ATAD2-WDYHV1 1 6 chr8:123372637:- chr8:123436453:+ FRAMESHIFT NA TCGA-DX-AB2V-01A-11R-A41I-07 TSG101-PPFIA1 1 5 chr11:18514678:- chr11:70383003:+ FRAMESHIFT NA TCGA-DX-AB2V-01A-11R-A41I-07 KIRREL-CD1A 1000 1000 chr1:157993728:+ chr1:158256786:+ INFRAME NA TCGA-DX-AB2W-01A-11R-A39D-07 MYO5A-GALK2 1 13 chr15:52528780:- chr15:49281987:+ INFRAME NA TCGA-DX-AB2W-01A-11R-A39D-07 NIPBL-L3MBTL4 2 5 chr5:36877178:+ chr18:6171942:- . NA TCGA-DX-AB2W-01A-11R-A39D-07 PTDSS2-B4GALNT4 2 3 chr11:460288:+ chr11:372109:+ FRAMESHIFT NA TCGA-DX-AB2X-01A-11R-A38C-07 RPL22-PRDM16 40 249 chr1:6197652:- chr1:3425581:+ FRAMESHIFT NA TCGA-DX-AB2X-01A-11R-A38C-07 FAM222B-ALDOC 26 79 chr17:28842682:- chr17:28575544:- . NA TCGA-DX-AB2Z-01A-11R-A38C-07 PHLDB1-ACTN1 61 98 chr11:118621538:+ chr14:68925672:- . NA TCGA-DX-AB2Z-01A-11R-A38C-07 CTIF-AJUBA 26 133 chr18:48539312:+ chr14:22978445:- . NA TCGA-DX-AB2Z-01A-11R-A38C-07 SENP5-FAM193A 2 6 chr3:196930900:+ chr4:2672121:+ FRAMESHIFT NA TCGA-DX-AB32-01A-11R-A41I-07 LMAN1-NBEAL1 166 476 chr18:59345919:- chr2:203226123:+ FRAMESHIFT NA TCGA-DX-AB32-01A-11R-A41I-07 ZNF407-TFAP4 2 2 chr18:74597937:+ chr16:4262701:- . NA TCGA-DX-AB35-01A-21R-A41I-07 TMEM5-FAM19A2 170 744 chr12:63802405:+ chr12:62192243:- . NA TCGA-DX-AB35-01A-21R-A41I-07 DPY19L2-NUP107 137 837 chr12:63665835:- chr12:68731110:+ FRAMESHIFT NA TCGA-DX-AB35-01A-21R-A41I-07 TBK1-TMBIM4 58 191 chr12:64455957:+ chr12:66153448:- FRAMESHIFT NA TCGA-DX-AB35-01A-21R-A41I-07 TBK1-TMTC2 37 61 chr12:64455957:+ chr12:83061768:+ FRAMESHIFT NA TCGA-DX-AB35-01A-21R-A41I-07 PTPRR-KCNC2 17 55 chr12:70698265:- chr12:75051317:- FRAMESHIFT NA TCGA-DX-AB35-01A-21R-A41I-07 CNOT2-TMTC2 8 70 chr12:70311017:+ chr12:82965024:+ INFRAME NA TCGA-DX-AB35-01A-21R-A41I-07 FRS2-PTPRR 4 42 chr12:69532056:+ chr12:70701323:- . NA TCGA-DX-AB35-01A-21R-A41I-07 ZDHHC17-MYRFL 2 16 chr12:76764329:+ chr12:69952113:+ INFRAME NA TCGA-DX-AB35-01A-21R-A41I-07 AFF1-WWOX 2 10 chr4:87115299:+ chr16:79211608:+ INFRAME NA TCGA-DX-AB35-01A-21R-A41I-07 METTL25-PTPRQ 2 4 chr12:82403130:+ chr12:80632192:+ INFRAME NA TCGA-DX-AB35-01A-21R-A41I-07 NAV3-FAM19A2 2 3 chr12:78059115:+ chr12:61755024:- FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 MVK-CPM 41 207 chr12:109586125:+ chr12:68856679:- FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 KCTD10-SLC26A10 27 76 chr12:109456906:- chr12:57625786:+ . NA TCGA-DX-AB36-01A-11R-A41I-07 PPP1R12A-METTL25 13 115 chr12:79872808:- chr12:82456727:+ INFRAME NA TCGA-DX-AB36-01A-11R-A41I-07 FGGY-CC2D1B 15 63 chr1:59626049:+ chr1:52362746:- FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 FRS2-SLC26A10 19 47 chr12:69574908:+ chr12:57620342:+ INFRAME NA TCGA-DX-AB36-01A-11R-A41I-07 CDK4-ANO5 4 53 chr12:57752175:- chr11:22270312:+ . NA TCGA-DX-AB36-01A-11R-A41I-07 TRIM44-LDLRAD3 9 33 chr11:35735445:+ chr11:36227085:+ FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 NEGR1-ZFYVE9 6 30 chr1:72282319:- chr1:52216369:+ . NA TCGA-DX-AB36-01A-11R-A41I-07 CDK17-MSRB3 8 3 chr12:96399986:- chr12:65368998:+ . NA TCGA-DX-AB36-01A-11R-A41I-07 ANO5-CPM 2 26 chr11:22276199:+ chr12:68859071:- FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 OTOGL-TRPV4 5 14 chr12:80323840:+ chr12:109814827:- . NA TCGA-DX-AB36-01A-11R-A41I-07 PCM1-VEZT 4 6 chr8:18011827:+ chr12:95266357:+ INFRAME NA TCGA-DX-AB36-01A-11R-A41I-07 FGD6-RPSAP52 1 16 chr12:95089569:- chr12:65759031:- . NA TCGA-DX-AB36-01A-11R-A41I-07 ZDHHC2-FGD6 1 13 chr8:17156853:+ chr12:95085908:- FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 YEATS4-ZFYVE9 2 6 chr12:69360023:+ chr1:52216369:+ . NA TCGA-DX-AB36-01A-11R-A41I-07 CDK17-USP30 1 5 chr12:96311052:- chr12:109067524:+ FRAMESHIFT NA TCGA-DX-AB36-01A-11R-A41I-07 ZDHHC2-RPSAP52 1 5 chr8:17156853:+ chr12:65759031:- . NA TCGA-DX-AB36-01A-11R-A41I-07 COL5A2-OS9 1000 1000 chr2:189032737:- chr12:57716699:+ . NA TCGA-DX-AB37-01A-11R-A41I-07 PLXND1-NEK11 11 57 chr3:129585952:- chr3:131349557:+ FRAMESHIFT NA TCGA-DX-AB37-01A-11R-A41I-07 CNOT2-MBD4 8 19 chr12:70319364:+ chr3:129434136:- INFRAME NA TCGA-DX-AB37-01A-11R-A41I-07 ST7-TBXAS1 5 15 chr7:116953691:+ chr7:140007091:+ FRAMESHIFT NA TCGA-DX-AB37-01A-11R-A41I-07 FGD6-PTPRR 7 5 chr12:95089569:- chr12:70639277:- FRAMESHIFT NA TCGA-DX-AB37-01A-11R-A41I-07 CNOT2-TRMT10C 4 12 chr12:70319364:+ chr3:101564770:+ . NA TCGA-DX-AB37-01A-11R-A41I-07 MUC3A-IGHJ2 7 0 chr7:100957106:+ chr14:105865247:- FRAMESHIFT NA TCGA-DX-AB37-01A-11R-A41I-07 SH2B3-RBM19 3 11 chr12:111418877:+ chr12:113937136:- INFRAME NA TCGA-DX-AB37-01A-11R-A41I-07 ZBTB20-CPM 1 7 chr3:114500352:- chr12:68859071:- . NA TCGA-DX-AB3A-01A-11R-A41I-07 MDM2-FGF18 65 124 chr12:68820374:+ chr5:171456539:+ FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 CTDSP2-LGR5 27 51 chr12:57846372:- chr12:71504614:+ FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 FKBP5-CPM 16 25 chr6:35642720:- chr12:68867048:- FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 COMMD10-NUP107 12 35 chr5:116092700:+ chr12:68741813:+ INFRAME NA TCGA-DX-AB3A-01A-11R-A41I-07 OSBPL9-FKBP5 11 37 chr1:51617221:+ chr6:35642843:- . NA TCGA-DX-AB3A-01A-11R-A41I-07 TEN1-CYP2J2 9 35 chr17:75979511:+ chr1:59916100:- . NA TCGA-DX-AB3A-01A-11R-A41I-07 CTDSP2-COMMD10 10 28 chr12:57846372:- chr5:116091079:+ FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 MRS2-LRRIQ1 4 30 chr6:24418578:+ chr12:85262915:+ . NA TCGA-DX-AB3A-01A-11R-A41I-07 GPRIN1-TM2D1 6 17 chr5:176609999:- chr1:61701025:- . NA TCGA-DX-AB3A-01A-11R-A41I-07 BCAS3-ZRANB2-AS2 4 15 chr17:60709325:+ chr1:71463331:+ . NA TCGA-DX-AB3A-01A-11R-A41I-07 ACP6-PIAS3 5 5 chr1:147669830:- chr1:145857006:- INFRAME NA TCGA-DX-AB3A-01A-11R-A41I-07 GRB10-PIP4K2C 4 9 chr7:50669722:- chr12:57594025:+ INFRAME NA TCGA-DX-AB3A-01A-11R-A41I-07 NSD1-FGF18 2 17 chr5:177257151:+ chr5:171449147:+ INFRAME Likely Oncogenic NA TCGA-DX-AB3A-01A-11R-A41I-07 CACHD1-USP32 4 8 chr1:64641969:+ chr17:60345608:- INFRAME NA TCGA-DX-AB3A-01A-11R-A41I-07 TMEM159-NDUFAB1 2 16 chr16:21161278:+ chr16:23587319:- INFRAME NA TCGA-DX-AB3A-01A-11R-A41I-07 CUEDC1-LRP8 3 10 chr17:57879611:- chr1:53280715:- FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 USP32-NIFKP2 3 6 chr17:60345481:- chr5:174923641:+ . NA TCGA-DX-AB3A-01A-11R-A41I-07 TMED7-PDE4B 2 9 chr5:115625601:- chr1:66247460:+ FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 DHX40-CEP112 3 2 chr17:59570663:+ chr17:66070001:- INFRAME NA TCGA-DX-AB3A-01A-11R-A41I-07 FRS2-CAPS2 2 4 chr12:69532056:+ chr12:75371482:- . NA TCGA-DX-AB3A-01A-11R-A41I-07 TLK2-TSPOAP1 2 4 chr17:62586226:+ chr17:58307941:- FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 RGL1-POU2F1 2 3 chr1:183806485:+ chr1:167415500:+ FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 ZCCHC11-NFIA 2 2 chr1:52552931:- chr1:61359147:+ . NA TCGA-DX-AB3A-01A-11R-A41I-07 SLC44A5-GLIS1 1 5 chr1:75339582:- chr1:53529952:- FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 TSFM-RFWD2 2 1 chr12:57793073:+ chr1:175947239:- FRAMESHIFT NA TCGA-DX-AB3A-01A-11R-A41I-07 CPEB4-CEP112 1 4 chr5:173910604:+ chr17:66183307:- . NA TCGA-DX-AB3A-01A-11R-A41I-07 RNF44-MILR1 1 2 chr5:176537731:- chr17:64467565:+ . NA TCGA-DX-AB3B-01A-11R-A41I-07 SS18-SSX1 100 404 chr18:26032399:- chrX:48263782:+ INFRAME NA TCGA-DX-AB3C-01A-11R-A41I-07 SS18-SSX2 48 105 chr18:26032399:- chrX:52700578:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 FRS2-TMTC2 174 475 chr12:69532056:+ chr12:82985925:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 RASSF3-STK10 98 346 chr12:64610743:+ chr5:172064812:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 CPSF6-COL9A1 24 534 chr12:69239706:+ chr6:70217081:- FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 ETS1-UBE2V2 25 337 chr11:128521913:- chr8:48043033:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 KCNN3-YEATS4 26 129 chr1:154733003:- chr12:69362788:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 DAP-SEMA5A 22 90 chr5:10761014:- chr5:9066646:- FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 SEMA5A-SLC6A19 14 111 chr5:9066421:- chr5:1208746:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 JAZF1-EVX1 18 64 chr7:28180463:- chr7:27245048:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 ACVR2A-SUMO1 18 61 chr2:147923111:+ chr2:202207321:- FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 DCAF6-YEATS4 21 42 chr1:168045227:+ chr12:69390147:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 DCAF6-HMCN1 11 59 chr1:168045227:+ chr1:185846026:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 PPFIA2-OTOGL 6 77 chr12:81753973:- chr12:80296827:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 ANO4-C12orf66 19 10 chr12:100717547:+ chr12:64215963:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 NDUFS2-SLC24A2 9 34 chr1:161202480:+ chr9:19597279:- FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 ABCA9-TANC2 6 43 chr17:68982562:- chr17:63267748:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 ZBTB44-FRS2 13 9 chr11:130314375:- chr12:69562180:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 C12orf66-CPM 7 28 chr12:64215678:- chr12:68957678:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 BCL9-BEST3 8 19 chr1:147541674:+ chr12:69655813:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 FXN-FPR2 7 23 chr9:69065035:+ chr19:51760032:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 B4GALT3-ERO1B 8 18 chr1:161173605:- chr1:236243495:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 TMEM255A-FPR2 4 29 chrX:120304349:- chr19:51760032:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 TNS3-ALG13 10 5 chr7:47582051:- chrX:111682132:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 ZNF146-ABCA9 3 30 chr19:36218195:+ chr17:68996014:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 CLK2-MARS 5 21 chr1:155268293:- chr12:57488030:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 ZNF665-RANBP3L 2 31 chr19:53175445:- chr5:36271311:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 OTOGL-HMGA2 4 22 chr12:80305695:+ chr12:65828001:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 SLC7A5-NOS1AP 8 4 chr16:87868885:- chr1:162154405:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 CD2AP-MGAT4C 4 16 chr6:47554766:+ chr12:86838880:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 DNM2-GDF15 2 23 chr19:10718403:+ chr19:18382350:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 RNF216-ABCB5 3 18 chr7:5711761:- chr7:20623265:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 FAM65C-TMEM189 5 9 chr20:50691126:- chr20:50143621:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 MB21D2-CTLA4 3 14 chr3:192917630:- chr2:203870586:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 SLIT3-TBC1D30 4 10 chr5:169193479:- chr12:64864668:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 TANC2-ARHGEF12 3 13 chr17:63074014:+ chr11:120446403:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 SLIT3-KCNMB4 5 3 chr5:169244705:- chr12:70398729:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 ZNF613-UGGT1 1 17 chr19:51929896:+ chr2:128145803:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 TAX1BP1-SYT1 1 16 chr7:27787603:+ chr12:79217503:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 METTL25-GTPBP10 3 7 chr12:82358824:+ chr7:90372155:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 ETV1-BTBD9 2 9 chr7:13931502:- chr6:38256516:- FRAMESHIFT Likely Oncogenic NA TCGA-FX-A2QS-01A-11R-A21T-07 RCAN2-DOCK2 1 13 chr6:46246748:- chr5:169840757:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 ASH1L-SLIT3 1 11 chr1:155562153:- chr5:169251459:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 FBXW11-LMAN2 1 10 chr5:172006458:- chr5:177338605:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 SMC2-TENM1 2 6 chr9:104120162:+ chrX:124963817:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 ANO6-MSRB3 3 1 chr12:45367793:+ chr12:65453728:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 DBF4-VAMP4 1 9 chr7:87888059:+ chr1:171738463:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 BORCS5-SPAG9 1 8 chr12:12361349:+ chr17:50998617:- FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 CLDN12-EBF1 1 8 chr7:90494430:+ chr5:158699142:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 PDCD6-COQ8B 1 8 chr5:272772:+ chr19:40710136:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 UMAD1-BEX5 1 8 chr7:7673453:+ chrX:102154810:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 VAMP4-MYRFL 2 4 chr1:171738349:- chr12:69926571:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 ZNF383-TEX14 1 8 chr19:37236074:+ chr17:58652002:- . NA TCGA-FX-A2QS-01A-11R-A21T-07 N4BP1-GPATCH2 2 3 chr16:48609775:- chr1:217620499:- FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 RAP1A-MAML1 1 7 chr1:111627563:+ chr5:179771147:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 HMCN1-ZSWIM4 1 3 chr1:186082961:+ chr19:13799720:+ FRAMESHIFT NA TCGA-FX-A2QS-01A-11R-A21T-07 HERPUD2-SCAF11 1 2 chr7:35694184:- chr12:45964188:- INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 RAB3IP-HEPH 1 2 chr12:69756663:+ chrX:66170558:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 TMTC2-MYRFL 1000 1000 chr12:82687668:+ chr12:69893763:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 PTPRR-NAV3 1000 1000 chr12:70684127:- chr12:77966229:+ INFRAME NA TCGA-FX-A2QS-01A-11R-A21T-07 CPSF6-MYRFL 1000 1000 chr12:69262561:+ chr12:69903643:+ . NA TCGA-FX-A2QS-01A-11R-A21T-07 NAV3-EVX1 1000 1000 chr12:77831704:+ chr7:27245048:+ INFRAME NA TCGA-FX-A3NJ-01A-11R-A21T-07 FRS2-TMTC2 1 1 chr12:69532056:+ chr12:82985925:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 CPM-MYRFL 122 860 chr12:68932678:- chr12:69952113:+ INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 PTPRS-ANGPTL4 74 400 chr19:5286050:- chr19:8364206:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 CTDSP2-ZDHHC17 37 229 chr12:57829448:- chr12:76848233:+ FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 FRS2-PTPRQ 30 229 chr12:69470530:+ chr12:80678602:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 FRS2-DNM2 12 179 chr12:69470530:+ chr19:10793720:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 CTDSP2-TMEM200A 28 105 chr12:57824029:- chr6:130440407:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 CPSF6-TMTC2 18 71 chr12:69239706:+ chr12:82857010:+ FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 SESN1-METTL1 23 45 chr6:108992787:- chr12:57771257:- FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 DLGAP4-HM13 13 70 chr20:36500611:+ chr20:31514481:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 OSBPL8-CSRP2 13 39 chr12:76450851:- chr12:76866261:- . NA TCGA-FX-A3NK-01A-11R-A21T-07 MDM2-MYRFL 12 39 chr12:68824651:+ chr12:69855280:+ INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 PPFIA2-TRHDE 8 44 chr12:81753973:- chr12:72377995:+ INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 WASF1-SLC41A3 9 31 chr6:110113326:- chr3:126012749:- INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 OS9-ZNF560 5 24 chr12:57696373:+ chr19:9498215:- . NA TCGA-FX-A3NK-01A-11R-A21T-07 DNM2-PTH2R 7 12 chr19:10718403:+ chr2:208428201:+ FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 SMARCA4-MYF5 6 14 chr19:10961174:+ chr12:80717040:+ . Likely Oncogenic NA TCGA-FX-A3NK-01A-11R-A21T-07 NOTCH3-CACNA1A 5 12 chr19:15197500:- chr19:13371779:- INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 SLC44A2-CDK19 3 17 chr19:10602561:+ chr6:110670541:- FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 VTA1-PPIL4 2 21 chr6:142170421:+ chr6:149505704:- INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 NAV3-CSRP2 3 16 chr12:77325214:+ chr12:76866261:- . NA TCGA-FX-A3NK-01A-11R-A21T-07 ATP8B4-LINGO1 3 13 chr15:50038768:- chr15:77615900:- FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 RBM39-OCA2 3 13 chr20:35740824:- chr15:27926254:- INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 TP53BP1-ATP8B4 3 5 chr15:43469858:- chr15:50074185:- FRAMESHIFT Likely Oncogenic NA TCGA-FX-A3NK-01A-11R-A21T-07 ZNF560-OS9 3 2 chr19:9498128:- chr12:57715760:+ . NA TCGA-FX-A3NK-01A-11R-A21T-07 OCA2-C20orf203 1 8 chr15:27871154:- chr20:32651981:- . NA TCGA-FX-A3NK-01A-11R-A21T-07 THOP1-NOTCH3 1 8 chr19:2785678:+ chr19:15197578:- INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 PDE4A-MBD3L2 1 4 chr19:10431086:+ chr19:7051041:+ FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 UST-TRIML1 1 4 chr6:148887029:+ chr4:188142252:+ INFRAME NA TCGA-FX-A3NK-01A-11R-A21T-07 NEK11-FBN3 1 2 chr3:131080588:+ chr19:8133106:- FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 CPM-BEST3 1000 1000 chr12:68932678:- chr12:69655813:- FRAMESHIFT NA TCGA-FX-A3NK-01A-11R-A21T-07 PTPRR-COL5A3 1000 1000 chr12:80619448:+ chr19:10004063:- . NA TCGA-FX-A3NK-01A-11R-A21T-07 FRS2-PTPRR 1000 1000 chr12:69470530:+ chr12:80678602:+ . NA TCGA-FX-A3RE-01A-11R-A22K-07 SND1-IMMP2L 43 265 chr7:127929329:+ chr7:110663721:- FRAMESHIFT NA TCGA-FX-A3RE-01A-11R-A22K-07 PPP2R2A-SMIM19 6 33 chr8:26293740:+ chr8:42546469:+ . NA TCGA-FX-A3RE-01A-11R-A22K-07 C1QTNF6-RAC2 6 31 chr22:37185218:- chr22:37226803:- INFRAME NA TCGA-FX-A3RE-01A-11R-A22K-07 ANKHD1-MASP2 2 17 chr5:140402273:+ chr1:11030250:- FRAMESHIFT NA TCGA-FX-A3RE-01A-11R-A22K-07 DOCK4-SND1 2 4 chr7:111736917:- chr7:128074502:+ FRAMESHIFT NA TCGA-FX-A3RE-01A-11R-A22K-07 CPM-MYRFL 2 3 chr12:68932678:- chr12:69952113:+ INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 MARK2-NCAM1 45 298 chr11:63895633:+ chr11:113133449:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 PLAUR-WDR45 32 145 chr19:43665316:- chrX:49078112:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 SPAG5-SDF2 19 97 chr17:28591698:- chr17:28649276:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 DNAJC17-TRIP4 14 80 chr15:40807369:- chr15:64454997:+ FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 MPRIP-OAZ2 7 66 chr17:17042971:+ chr15:64691591:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 AKAP10-CCL3 10 38 chr17:19977592:- chr17:36089297:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 CHD2-CCPG1 8 43 chr15:92901299:+ chr15:55385714:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 PDIA3-EFCAB5 2 62 chr15:43746706:+ chr17:30091871:+ FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 TEAD1-INSC 7 27 chr11:12883125:+ chr11:15200824:+ INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 CCPG1-YWHAE 2 46 chr15:55356312:- chr17:1365058:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 DPP8-TRPM1 6 27 chr15:65474209:- chr15:31035674:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 TLN2-VPS13C 7 22 chr15:62390685:+ chr15:61967447:- . NA TCGA-FX-A3TO-01A-11R-A22K-07 VPS13C-EHD4 5 27 chr15:61964699:- chr15:41953940:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 FBXL20-BTBD1 8 12 chr17:39343180:- chr15:83056545:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 PYGO1-FBN1 3 28 chr15:55587835:- chr15:48499038:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 TIGAR-PTPN6 4 22 chr12:4321303:+ chr12:6951609:+ INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 PRPSAP2-EPN2 4 16 chr17:18877870:+ chr17:19274051:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 AGAP1-SNX1 5 7 chr2:236049281:+ chr15:64112573:+ FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 PLXDC1-ACE 1 18 chr17:39152546:- chr17:63488648:+ FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 SNAP23-CCDC144NL 4 6 chr15:42495713:+ chr17:20893462:- . NA TCGA-FX-A3TO-01A-11R-A22K-07 MYDGF-MAP2K3 2 9 chr19:4659931:- chr17:21298413:+ INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 B2M-RASGRF1 1 12 chr15:44711613:+ chr15:78973420:- FRAMESHIFT Likely Oncogenic NA TCGA-FX-A3TO-01A-11R-A22K-07 EXOC2-GCNT2 3 4 chr6:532469:- chr6:10509087:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 FBN1-MYO5A 2 8 chr15:48452562:- chr15:52433285:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 RTN4RL2-P2RX3 1 12 chr11:57468090:+ chr11:57368009:+ FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 SOX5-SPSB2 2 7 chr12:23845983:- chr12:6882287:- . NA TCGA-FX-A3TO-01A-11R-A22K-07 ABCA1-NIPSNAP3B 2 6 chr9:104927935:- chr9:104770849:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 PRKRIP1-TMEM248 2 6 chr7:102366076:+ chr7:66941848:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 IQGAP1-RASGRF1 1 9 chr15:90390873:+ chr15:79006434:- INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 TEAD4-ERC1 1 9 chr12:2960196:+ chr12:1444562:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 SGMS1-AGAP6 1 8 chr10:50433476:- chr10:50004685:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 HS3ST3B1-TMEM92 2 3 chr17:14302072:+ chr17:50278556:+ INFRAME NA TCGA-FX-A3TO-01A-11R-A22K-07 GLIS3-TOP1 2 1 chr9:4286038:- chr20:41061394:+ INFRAME Likely Oncogenic NA TCGA-FX-A3TO-01A-11R-A22K-07 CSPG4-MYO1D 1 4 chr15:75712668:- chr17:32755662:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 SCAPER-GLCE 1 4 chr15:76800248:- chr15:69255794:+ . NA TCGA-FX-A3TO-01A-11R-A22K-07 NCOR1-UNC45B 1 3 chr17:16117888:- chr17:35148264:+ INFRAME Likely Oncogenic NA TCGA-FX-A3TO-01A-11R-A22K-07 RASGRF1-HCN4 1 3 chr15:78971866:- chr15:73343808:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 SND1-IMMP2L 1 1 chr7:127929329:+ chr7:110663721:- FRAMESHIFT NA TCGA-FX-A3TO-01A-11R-A22K-07 POM121C-TMEM248 1000 1000 chr7:75484198:- chr7:66941848:+ . NA TCGA-FX-A48G-01A-11R-A24X-07 SETD2-RBM6 301 641 chr3:47163854:- chr3:50075201:+ INFRAME Likely Oncogenic NA TCGA-FX-A48G-01A-11R-A24X-07 RFX2-ADK 3 11 chr19:6199476:- chr10:74670183:+ . NA TCGA-FX-A48G-01A-11R-A24X-07 RPTOR-GPC3 2 15 chr17:80545791:+ chrX:133953211:- FRAMESHIFT NA TCGA-FX-A48G-01A-11R-A24X-07 CNTNAP3P2-PRUNE2 2 6 chr9:67059643:+ chr9:76826732:- . NA TCGA-FX-A76Y-01A-11R-A355-07 NT5C2-DLEU1 21 116 chr10:103139406:- chr13:50104704:+ INFRAME NA TCGA-FX-A76Y-01A-11R-A355-07 ACTR10-MKX 12 34 chr14:58200294:+ chr10:27675554:- FRAMESHIFT NA TCGA-FX-A76Y-01A-11R-A355-07 PLXDC2-PDCD11 5 20 chr10:20177409:+ chr10:103422988:+ FRAMESHIFT NA TCGA-FX-A76Y-01A-11R-A355-07 KCNMA1-ESD 3 14 chr10:77403862:- chr13:46793444:- . NA TCGA-FX-A76Y-01A-11R-A355-07 MYPN-PLXDC2 3 10 chr10:68158627:+ chr10:20164468:+ FRAMESHIFT NA TCGA-FX-A76Y-01A-11R-A355-07 ENTPD7-CYSLTR2 4 5 chr10:99688750:+ chr13:48691212:+ . NA TCGA-FX-A76Y-01A-11R-A355-07 AS3MT-HERC4 1 12 chr10:102877035:+ chr10:67956976:- FRAMESHIFT NA TCGA-FX-A76Y-01A-11R-A355-07 GRTP1-SH3PXD2A 2 4 chr13:113344863:- chr10:103767169:- FRAMESHIFT NA TCGA-FX-A76Y-01A-11R-A355-07 ZNF404-DMKN 1 3 chr19:43883956:- chr19:35506185:- INFRAME NA TCGA-FX-A76Y-01A-11R-A355-07 CHCHD1-R3HCC1L 1 2 chr10:73782441:+ chr10:98156093:+ . NA TCGA-FX-A8OO-01A-11R-A36F-07 SS18-SSX2 65 124 chr18:26032399:- chrX:52700578:- INFRAME NA TCGA-HB-A2OT-01A-11R-A21T-07 RPAIN-STX8 13 175 chr17:5422829:+ chr17:9250645:- INFRAME NA TCGA-HB-A2OT-01A-11R-A21T-07 FAM212B-DHRS3 22 90 chr1:111739186:- chr1:12580666:- INFRAME NA TCGA-HB-A2OT-01A-11R-A21T-07 MYH10-TEKT3 14 59 chr17:8589081:- chr17:15314230:- INFRAME NA TCGA-HB-A2OT-01A-11R-A21T-07 C6orf89-SOD2 5 33 chr6:36926861:+ chr6:159679807:- . NA TCGA-HB-A2OT-01A-11R-A21T-07 CREBBP-WRAP53 1 23 chr16:3810603:- chr17:7688648:+ . Likely Oncogenic NA TCGA-HB-A2OT-01A-11R-A21T-07 IGFBPL1-FAM214B 3 3 chr9:38413237:- chr9:35108737:- . NA TCGA-HB-A2OT-01A-11R-A21T-07 ITGA5-MMP9 1 2 chr12:54411834:- chr20:46014124:+ INFRAME NA TCGA-HB-A3L4-01A-11R-A21T-07 FBXW2-NXNL2 5 14 chr9:120787769:- chr9:88575087:+ . NA TCGA-HB-A3L4-01A-11R-A21T-07 ADCY9-SPG20 3 13 chr16:3983232:- chr13:36329517:- FRAMESHIFT NA TCGA-HB-A3L4-01A-11R-A21T-07 IFT88-FAM114A1 1 4 chr13:20583019:+ chr4:38905522:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 RMND1-MTHFD1L 14 476 chr6:151452016:- chr6:150905650:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 YEATS4-ARFGEF3 46 174 chr12:69360023:+ chr6:138291733:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 VMP1-TK1 30 99 chr17:59707748:+ chr17:78175618:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 GRIK2-RNF217 33 53 chr6:101928632:+ chr6:125045211:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 GNA11-TMCO3 12 58 chr19:3094787:+ chr13:113520616:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 AKAP12-ASCC3 16 40 chr6:151240724:+ chr6:100590059:- FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 WDFY3-PLAGL1 15 34 chr4:84966209:- chr6:143968978:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 LAMA2-GRIK2 12 33 chr6:129192853:+ chr6:101676623:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 CCNC-ERVW-1 18 0 chr6:99568496:- chr7:92468945:- INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 CPSF6-LAMA2 4 50 chr12:69239706:+ chr6:129177706:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 GRIP1-TMEM5 4 46 chr12:66596847:- chr12:63805234:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 OPRM1-TCEAL1 9 16 chr6:154246760:+ chrX:103629472:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 OPRM1-TCEAL3 9 16 chr6:154246760:+ chrX:103629472:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 ZDHHC17-SYT1 4 33 chr12:76805439:+ chr12:78955462:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 SYT1-PPFIA2 7 15 chr12:79047362:+ chr12:81457866:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 USP15-DPY19L2 2 31 chr12:62325933:+ chr12:63591127:- INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 PLP1-CBARP 3 18 chrX:103776999:+ chr19:1236121:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 RNASEH2B-AGXT2 4 12 chr13:50910140:+ chr5:35014119:- FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 MAML3-CCDC170 4 11 chr4:139889357:- chr6:151548304:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 RGS17-SYNE1 4 11 chr6:153131124:- chr6:152488503:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 C12orf66-NXF3 4 8 chr12:64215678:- chrX:103084883:- FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 METTL24-REPS1 4 8 chr6:110357955:- chr6:138930098:- FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 PDP1-INA 4 8 chr8:93917079:+ chr10:103287035:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 TXNRD2-EVX1 5 4 chr22:19931030:- chr7:27245048:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 EEF1DP3-BLVRB 3 9 chr13:31846939:+ chr19:40458545:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 MEX3D-DOCK11 2 13 chr19:1567464:- chrX:118542725:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 FAXC-MYRFL 1 11 chr6:99333351:- chr12:69855280:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 JAM3-ACAD8 1 9 chr11:134069159:+ chr11:134256548:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 MTHFD1L-ARMT1 2 5 chr6:150866049:+ chr6:151454548:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 NFIL3-AUH 2 5 chr9:91423640:- chr9:91220992:- . NA TCGA-HB-A3YV-01A-11R-A24X-07 RBPJ-SEL1L3 1 8 chr4:26321048:+ chr4:25833569:- INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 ALX4-LMX1A 1 6 chr11:44309597:- chr1:165213813:- INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 MRPS18A-METTL7A 1 6 chr6:43681089:- chr12:50924667:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 IFNGR1-NHSL1 1 5 chr6:137219243:- chr6:138447193:- FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 FLNC-COL3A1 1 3 chr7:128842698:+ chr2:189006345:+ FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 ZBTB49-SUPT3H 1 3 chr4:4315970:+ chr6:45020632:- FRAMESHIFT NA TCGA-HB-A3YV-01A-11R-A24X-07 TMBIM4-PALLD 1 2 chr12:66169855:- chr4:168711581:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 WDR13-PBX3 1 2 chrX:48604390:+ chr9:125929655:+ INFRAME NA TCGA-HB-A3YV-01A-11R-A24X-07 UTRN-TNFAIP3 1000 1000 chr6:144426330:+ chr6:137867406:+ . NA TCGA-HB-A3YV-01A-11R-A24X-07 ATRX-ABCB7 1000 1000 chrX:77785846:- chrX:75099062:- . Likely Oncogenic NA TCGA-HB-A43Z-01A-11R-A24X-07 TBCD-HLCS 18 109 chr17:82930643:+ chr21:36767285:- INFRAME NA TCGA-HB-A43Z-01A-11R-A24X-07 MATN2-POP1 7 51 chr8:97961530:+ chr8:98123336:+ . NA TCGA-HB-A43Z-01A-11R-A24X-07 SARNP-MMP19 14 13 chr12:55817666:- chr12:55842438:- INFRAME NA TCGA-HB-A43Z-01A-11R-A24X-07 VDAC2-C10orf11 4 29 chr10:75214070:+ chr10:76036008:+ FRAMESHIFT NA TCGA-HB-A43Z-01A-11R-A24X-07 SLC8A1-SRSF7 3 10 chr2:40428473:- chr2:38750194:- FRAMESHIFT NA TCGA-HB-A43Z-01A-11R-A24X-07 UBAP2-FGF7P8 1 8 chr9:33986760:- chr9:62888535:+ . NA TCGA-HB-A43Z-01A-11R-A24X-07 ANK1-ZMAT4 1 5 chr8:41708778:- chr8:40697401:- INFRAME NA TCGA-HB-A5W3-01A-11R-A29R-07 SCMH1-HOOK3 1 12 chr1:41113283:- chr8:42906173:+ FRAMESHIFT NA TCGA-HB-A5W3-01A-11R-A29R-07 RIT1-NNMT 1 1 chr1:155904311:- chr11:114312045:+ FRAMESHIFT NA TCGA-IE-A3OV-01A-11R-A22K-07 FOXK2-SPECC1 21 105 chr17:82571870:+ chr17:20096631:+ . NA TCGA-IE-A3OV-01A-11R-A22K-07 ACACA-CCL5 8 65 chr17:37121355:- chr17:35872464:- FRAMESHIFT NA TCGA-IE-A3OV-01A-11R-A22K-07 KLHL24-MARCH7 9 46 chr3:183651276:+ chr2:159762880:+ FRAMESHIFT NA TCGA-IE-A3OV-01A-11R-A22K-07 TIMM22-C17orf51 7 37 chr17:999584:+ chr17:21535538:- INFRAME NA TCGA-IE-A3OV-01A-11R-A22K-07 TP53-FOXK2 7 37 chr17:7687377:- chr17:82585904:+ . Likely Oncogenic NA TCGA-IE-A3OV-01A-11R-A22K-07 FXR2-CAB39L 3 42 chr17:7602909:- chr13:49382941:- . NA TCGA-IE-A3OV-01A-11R-A22K-07 FOXK2-ABR 7 16 chr17:82587272:+ chr17:1083627:- FRAMESHIFT NA TCGA-IE-A3OV-01A-11R-A22K-07 ATP11B-CCDC39 3 27 chr3:182859359:+ chr3:180782124:- . NA TCGA-IE-A3OV-01A-11R-A22K-07 SMAD7-CTIF 2 25 chr18:48948384:- chr18:48636614:+ FRAMESHIFT NA TCGA-IE-A3OV-01A-11R-A22K-07 WDSUB1-FYTTD1 2 23 chr2:159275546:- chr3:197756426:+ INFRAME NA TCGA-IE-A3OV-01A-11R-A22K-07 SETDB2-AATF 2 17 chr13:49444857:+ chr17:37056601:+ . NA TCGA-IE-A3OV-01A-11R-A22K-07 PCTP-BRIP1 5 3 chr17:55751244:+ chr17:61784424:- INFRAME Likely Oncogenic NA TCGA-IE-A3OV-01A-11R-A22K-07 RPS6KA2-KIFC1 2 12 chr6:166626921:- chr6:33398029:+ INFRAME NA TCGA-IE-A3OV-01A-11R-A22K-07 MEGF8-ITPKC 3 5 chr19:42371482:+ chr19:40725340:+ INFRAME NA TCGA-IE-A3OV-01A-11R-A22K-07 NAA38-AKAP10 3 2 chr17:7883235:- chr17:19920118:- . NA TCGA-IE-A3OV-01A-11R-A22K-07 CCDC39-PECR 1 7 chr3:180870047:- chr2:216051545:- . NA TCGA-IE-A3OV-01A-11R-A22K-07 ZKSCAN8-SELENOV 1 7 chr6:28149624:+ chr19:39520146:+ . NA TCGA-IE-A3OV-01A-11R-A22K-07 AATF-DNAH2 1 6 chr17:37031685:+ chr17:7830300:+ FRAMESHIFT NA TCGA-IE-A3OV-01A-11R-A22K-07 CIZ1-SLC16A3 1 6 chr9:128176351:- chr17:82235983:+ . NA TCGA-IE-A3OV-01A-11R-A22K-07 TP53-RGS9 1 6 chr17:7687377:- chr17:65190175:+ . Likely Oncogenic NA TCGA-IE-A4EH-01A-11R-A24X-07 NAPA-PLAC1 48 151 chr19:47514843:- chrX:134566740:- . NA TCGA-IE-A4EH-01A-11R-A24X-07 ITGA8-MINDY3 3 41 chr10:15671603:- chr10:15847943:- INFRAME NA TCGA-IE-A4EH-01A-11R-A24X-07 XPO4-PCAT19 2 18 chr13:20799165:- chr19:41495427:- . NA TCGA-IE-A4EJ-01A-11R-A24X-07 DCUN1D4-IKZF1 6 31 chr4:51891851:+ chr7:50376533:+ FRAMESHIFT NA TCGA-IE-A4EJ-01A-11R-A24X-07 PIR-ZNF138 4 4 chrX:15397449:- chr7:64831451:+ INFRAME NA TCGA-IE-A4EJ-01A-11R-A24X-07 SH3KBP1-ZNF92 3 2 chrX:19683823:- chr7:65387902:+ INFRAME NA TCGA-IE-A6BZ-01A-11R-A30C-07 COX14-FBN1 62 169 chr12:50112301:+ chr15:48470756:- . NA TCGA-IE-A6BZ-01A-11R-A30C-07 RBPMS2-FAM96A 18 157 chr15:64748419:- chr15:64075537:- INFRAME NA TCGA-IE-A6BZ-01A-11R-A30C-07 VEGFA-NRDC 18 112 chr6:43771312:+ chr1:51840514:- INFRAME NA TCGA-IE-A6BZ-01A-11R-A30C-07 DUSP22-BEND6 10 68 chr6:311962:+ chr6:56981711:+ . NA TCGA-IE-A6BZ-01A-11R-A30C-07 TAF2-CLVS1 7 72 chr8:119831677:- chr8:61499455:+ FRAMESHIFT NA TCGA-IE-A6BZ-01A-11R-A30C-07 NAV1-TIMM17A 11 53 chr1:201718755:+ chr1:201957281:+ INFRAME NA TCGA-IE-A6BZ-01A-11R-A30C-07 METTL16-FXR2 1 26 chr17:2502204:- chr17:7604080:- FRAMESHIFT NA TCGA-IE-A6BZ-01A-11R-A30C-07 LDLR-TNPO2 1 19 chr19:11123344:+ chr19:12706795:- INFRAME NA TCGA-IE-A6BZ-01A-11R-A30C-07 CCT2-CACNG3 1 1 chr12:69585524:+ chr16:24361352:+ FRAMESHIFT NA TCGA-IS-A3K6-01A-11R-A21T-07 PIK3CB-CEP70 1 44 chr3:138834695:- chr3:138532570:- . Likely Oncogenic NA TCGA-IS-A3K6-01A-11R-A21T-07 TPM3-KCNN3 2 11 chr1:154169305:- chr1:154822184:- FRAMESHIFT NA TCGA-IS-A3K6-01A-11R-A21T-07 ACBD6-CCDC122 1 8 chr1:180314692:- chr13:43837429:- FRAMESHIFT NA TCGA-IS-A3K7-01A-11R-A21T-07 MREG-SPAG17 6 38 chr2:216013233:- chr1:117954049:- . NA TCGA-IS-A3K7-01A-11R-A21T-07 TTN-CHRNA1 2 26 chr2:178729288:- chr2:174784869:- . NA TCGA-IS-A3K7-01A-11R-A21T-07 RANBP10-USP10 4 8 chr16:67772034:- chr16:84716195:+ . NA TCGA-IS-A3K7-01A-11R-A21T-07 KDM2B-CORO1C 4 5 chr12:121439857:- chr12:108701323:- INFRAME NA TCGA-IS-A3KA-01A-11R-A21T-07 KLC1-APOPT1 4 4 chr14:103629494:+ chr14:103590181:+ . NA TCGA-IS-A3KA-01A-11R-A21T-07 CMTR1-KIF6 2 10 chr6:37453312:+ chr6:39691862:- . NA TCGA-IS-A3KA-01A-11R-A21T-07 ZNF638-EIF3B 2 1 chr2:71388723:+ chr7:2376950:+ INFRAME NA TCGA-IW-A3M4-01A-11R-A21T-07 USP20-CDRT4 1 20 chr9:129858112:+ chr17:15440285:- . NA TCGA-IW-A3M4-01A-11R-A21T-07 TVP23C-USP20 3 8 chr17:15545785:- chr9:129858050:+ INFRAME NA TCGA-IW-A3M4-01A-11R-A21T-07 ZCRB1-YAF2 1 8 chr12:42325924:- chr12:42210619:- . NA TCGA-IW-A3M4-01A-11R-A21T-07 CDRT4-USP20 1 7 chr17:15503098:- chr9:129858050:+ . NA TCGA-IW-A3M4-01A-11R-A21T-07 DST-RBM24 1 6 chr6:56489490:- chr6:17291756:+ FRAMESHIFT NA TCGA-IW-A3M6-01A-11R-A21T-07 NUP205-SERPINA12 15 73 chr7:135597418:+ chr14:94498430:- . NA TCGA-IW-A3M6-01A-11R-A21T-07 TARSL2-NET1 3 3 chr15:101664170:- chr10:5451830:+ . NA TCGA-JV-A5VE-01A-11R-A29R-07 GLOD4-NPLOC4 5 22 chr17:769869:- chr17:81622278:- INFRAME NA TCGA-JV-A5VE-01A-11R-A29R-07 AEBP2-LMO3 4 18 chr12:19493986:+ chr12:16600868:- INFRAME NA TCGA-JV-A5VE-01A-11R-A29R-07 MTDH-MAL2 1 15 chr8:97661173:+ chr8:119221587:+ INFRAME NA TCGA-JV-A5VF-01A-11R-A29R-07 BCL3-PPP5C 3 7 chr19:44751380:+ chr19:46375604:+ FRAMESHIFT NA TCGA-JV-A5VF-01A-11R-A29R-07 MYO10-RB1 1 5 chr5:16689824:- chr13:48360017:+ INFRAME Likely Oncogenic NA TCGA-JV-A75J-01A-11R-A32Q-07 UBA2-SMIM17 1 132 chr19:34464131:+ chr19:56655103:+ FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 PANK1-CRYBB1 18 37 chr10:89644600:- chr22:26612190:- FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 NUBP2-RHOT2 11 51 chr16:1783036:+ chr16:672686:+ . NA TCGA-JV-A75J-01A-11R-A32Q-07 EIF2AK1-PHF14 13 26 chr7:6054546:- chr7:11051612:+ FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 GNA12-CUL1 5 37 chr7:2794928:- chr7:148729962:+ . NA TCGA-JV-A75J-01A-11R-A32Q-07 NSMCE2-COL22A1 10 17 chr8:125182256:+ chr8:138844158:- INFRAME NA TCGA-JV-A75J-01A-11R-A32Q-07 BCR-KB-1572G7.5 7 12 chr22:23295155:+ chr22:23607042:+ . NA TCGA-JV-A75J-01A-11R-A32Q-07 FSCN1-CLIC2 5 14 chr7:5593768:+ chrX:155299145:- FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 NUBP2-RHBDL1 7 6 chr16:1783036:+ chr16:676971:+ INFRAME NA TCGA-JV-A75J-01A-11R-A32Q-07 NOM1-UVRAG 4 16 chr7:156950724:+ chr11:76065710:+ FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 KANSL1-WRAP53 1 27 chr17:46223671:- chr17:7688648:+ . NA TCGA-JV-A75J-01A-11R-A32Q-07 SLC7A1-AKNA 3 12 chr13:29595416:- chr9:114381446:- . NA TCGA-JV-A75J-01A-11R-A32Q-07 NSMCE2-EXT1 1 19 chr8:125156098:+ chr8:117804893:- . NA TCGA-JV-A75J-01A-11R-A32Q-07 SUZ12P1-GID4 1 19 chr17:30784892:+ chr17:18065180:+ . NA TCGA-JV-A75J-01A-11R-A32Q-07 BTAF1-HOGA1 1 15 chr10:91953873:+ chr10:97601857:+ FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 GSK3A-ZSCAN5A 3 6 chr19:42239955:- chr19:56274908:- . NA TCGA-JV-A75J-01A-11R-A32Q-07 PCNT-NSMCE2 1 13 chr21:46351540:+ chr8:125151171:+ INFRAME NA TCGA-JV-A75J-01A-11R-A32Q-07 SCRIB-FER1L6 1 10 chr8:143809551:- chr8:124082288:+ FRAMESHIFT NA TCGA-JV-A75J-01A-11R-A32Q-07 AKNA-ENOX1 1 9 chr9:114387860:- chr13:43667544:- . NA TCGA-K1-A3PN-01A-11R-A22K-07 ARHGAP35-SAE1 1 9 chr19:46937408:+ chr19:47143494:+ FRAMESHIFT NA TCGA-K1-A6RT-01A-32R-A33J-07 VPS45-PSMB4 4 19 chr1:150072226:+ chr1:151401817:+ FRAMESHIFT NA TCGA-K1-A6RT-01A-32R-A33J-07 PPP6R3-ATP6V0D2 2 9 chr11:68460827:+ chr8:86098904:+ . NA TCGA-K1-A6RT-01A-32R-A33J-07 MAPK1-YPEL1 2 6 chr22:21867322:- chr22:21710908:- . NA TCGA-K1-A6RT-01A-32R-A33J-07 RALGPS1-NUP210L 2 6 chr9:126915012:+ chr1:153995180:- . NA TCGA-K1-A6RU-01A-11R-A32Q-07 P2RX5-TRPV1 28 103 chr17:3679590:- chr17:3572249:- FRAMESHIFT NA TCGA-K1-A6RU-01A-11R-A32Q-07 FAM102A-RAD23B 26 40 chr9:127979992:- chr9:107318752:+ FRAMESHIFT NA TCGA-K1-A6RU-01A-11R-A32Q-07 SPTAN1-TBC1D13 15 32 chr9:128552696:+ chr9:128788334:+ . NA TCGA-K1-A6RU-01A-11R-A32Q-07 TP53-ELL 12 31 chr17:7687377:- chr19:18450975:- . Likely Oncogenic NA TCGA-K1-A6RU-01A-11R-A32Q-07 SVEP1-TJP2 9 36 chr9:110512926:- chr9:69249375:+ FRAMESHIFT NA TCGA-K1-A6RU-01A-11R-A32Q-07 RMI1-LCN2 4 45 chr9:83980891:+ chr9:128151638:+ . NA TCGA-K1-A6RU-01A-11R-A32Q-07 CORO1C-RBFOX1 6 13 chr12:108701124:- chr16:7518147:+ INFRAME NA TCGA-K1-A6RU-01A-11R-A32Q-07 SULF2-TSHZ2 3 21 chr20:47736703:- chr20:53487144:+ . NA TCGA-K1-A6RU-01A-11R-A32Q-07 AKT2-SMIM17 7 3 chr19:40256926:- chr19:56645568:+ . Likely Oncogenic NA TCGA-K1-A6RU-01A-11R-A32Q-07 APBA1-SUSD1 3 17 chr9:69456247:- chr9:112041960:- INFRAME NA TCGA-K1-A6RU-01A-11R-A32Q-07 NUP188-APBA1 2 17 chr9:128952846:+ chr9:69517279:- . NA TCGA-K1-A6RU-01A-11R-A32Q-07 GPBP1-DERL2 2 10 chr5:57261282:+ chr17:5477999:- . NA TCGA-K1-A6RU-01A-11R-A32Q-07 AKAP2-AGTPBP1 3 2 chr9:110048855:+ chr9:85712566:- . NA TCGA-K1-A6RU-01A-11R-A32Q-07 FAM207A-FER 2 4 chr21:44960168:+ chr5:109100396:+ INFRAME NA TCGA-K1-A6RU-01A-11R-A32Q-07 AGTPBP1-DAPK1 1 4 chr9:85741775:- chr9:87637943:+ INFRAME NA TCGA-K1-A6RU-01A-11R-A32Q-07 SKIV2L2-GPBP1 1 4 chr5:55308147:+ chr5:57214074:+ . NA TCGA-K1-A6RV-01A-11R-A32Q-07 WDR1-SLC2A9 93 476 chr4:10077304:- chr4:9835008:- INFRAME NA TCGA-K1-A6RV-01A-11R-A32Q-07 GALNT13-SMYD1 15 44 chr2:154140505:+ chr2:88084316:+ INFRAME NA TCGA-K1-A6RV-01A-11R-A32Q-07 PDCD11-FBXL15 13 41 chr10:103406790:+ chr10:102421052:+ INFRAME NA TCGA-K1-A6RV-01A-11R-A32Q-07 GPAT3-COPS4 10 46 chr4:83544602:+ chr4:83066438:+ INFRAME NA TCGA-K1-A6RV-01A-11R-A32Q-07 NPAS2-EXT2 10 12 chr2:100820414:+ chr11:44232353:+ . NA TCGA-K1-A6RV-01A-11R-A32Q-07 ZBTB20-TESMIN 3 26 chr3:114500352:- chr11:68708500:- . NA TCGA-K1-A6RV-01A-11R-A32Q-07 NTM-SORL1 2 25 chr11:131911648:+ chr11:121605113:+ FRAMESHIFT NA TCGA-K1-A6RV-01A-11R-A32Q-07 DIP2C-ORC4 4 9 chr10:689494:- chr2:147975975:- . NA TCGA-K1-A6RV-01A-11R-A32Q-07 LTN1-RPL39P40 4 5 chr21:28982316:- chr21:17500804:- . NA TCGA-K1-A6RV-01A-11R-A32Q-07 RASA1-XRCC4 1 9 chr5:87349364:+ chr5:83353125:+ INFRAME Likely Oncogenic NA TCGA-K1-A6RV-01A-11R-A32Q-07 ANXA7-DNAJC9 1 5 chr10:73387689:- chr10:73183576:- . NA TCGA-KD-A5QS-01A-11R-A27Q-07 CHSY3-RBM22 10 67 chr5:129908360:+ chr5:150698631:- INFRAME NA TCGA-KD-A5QS-01A-11R-A27Q-07 FAM118A-VAPB 2 25 chr22:45310183:+ chr20:58434602:+ . NA TCGA-KD-A5QS-01A-11R-A27Q-07 HMGB1P10-CCNA1 3 16 chr22:26560994:+ chr13:36437627:+ . NA TCGA-KD-A5QS-01A-11R-A27Q-07 AMOTL1-PIWIL4 2 4 chr11:94768560:+ chr11:94607439:+ FRAMESHIFT NA TCGA-KD-A5QS-01A-11R-A27Q-07 ARHGAP26-PRMT8 1 7 chr5:142770915:+ chr12:3549936:+ FRAMESHIFT NA TCGA-KD-A5QS-01A-11R-A27Q-07 CSRP1-ATG13 1 7 chr1:201496192:- chr11:46630045:+ . NA TCGA-KD-A5QS-01A-11R-A27Q-07 HEATR6-STXBP4 1 7 chr17:60076130:- chr17:55031168:+ INFRAME NA TCGA-KD-A5QS-01A-11R-A27Q-07 PIBF1-ELDR 1 7 chr13:72854155:+ chr7:55238666:- . NA TCGA-KD-A5QS-01A-11R-A27Q-07 WASHC4-PRDM4 2 3 chr12:105121204:+ chr12:107754109:- FRAMESHIFT NA TCGA-KD-A5QS-01A-11R-A27Q-07 SH3GL1-ZIC1 2 1 chr19:4400324:- chr3:147412518:+ FRAMESHIFT NA TCGA-KD-A5QS-01A-11R-A27Q-07 TPST1-TRIM24 1 5 chr7:66286709:+ chr7:138504290:+ FRAMESHIFT NA TCGA-KD-A5QS-01A-11R-A27Q-07 SLC22A17-MYH7 1 3 chr14:23352646:- chr14:23420234:- INFRAME NA TCGA-KD-A5QS-01A-11R-A27Q-07 ARHGEF7-RTTN 1 1 chr13:111153991:+ chr18:70150733:- INFRAME NA TCGA-KD-A5QS-01A-11R-A27Q-07 HMGB1-CCNA1 1000 1000 chr13:30462538:- chr13:36437629:+ INFRAME NA TCGA-KD-A5QT-01A-11R-A27Q-07 HS6ST3-FAM155A 8 40 chr13:96091569:+ chr13:107170786:- FRAMESHIFT NA TCGA-KD-A5QT-01A-11R-A27Q-07 YPEL1-DIAPH3 6 4 chr22:21735615:- chr13:59666846:- . NA TCGA-KD-A5QT-01A-11R-A27Q-07 ARHGAP44-ZSWIM7 1000 1000 chr17:12929046:+ chr17:15981144:- INFRAME NA TCGA-KD-A5QU-01A-11R-A27Q-07 TP53-DUS3L 7 56 chr17:7687377:- chr19:5788398:- . Likely Oncogenic NA TCGA-KD-A5QU-01A-11R-A27Q-07 MAST2-NASP 2 20 chr1:45829581:+ chr1:45613169:+ FRAMESHIFT NA TCGA-KD-A5QU-01A-11R-A27Q-07 DACH1-TNFSF11 1 13 chr13:71630556:- chr13:42606497:+ INFRAME NA TCGA-KD-A5QU-01A-11R-A27Q-07 PDE4D-NOA1 1 8 chr5:59180595:- chr4:56974022:- INFRAME NA TCGA-KD-A5QU-01A-11R-A27Q-07 RAD21-TPM2 1 1 chr8:116850618:- chr9:35685551:- FRAMESHIFT Likely Oncogenic NA TCGA-KD-A5QU-01A-11R-A27Q-07 TIMM8A-CAST 1 1 chrX:101348533:- chr5:96675539:+ INFRAME NA TCGA-KF-A41W-01A-11R-A24X-07 TMCO3-ATP11A 80 570 chr13:113539507:+ chr13:112717322:+ . NA TCGA-KF-A41W-01A-11R-A24X-07 CUL4A-F7 7 31 chr13:113239551:+ chr13:113117473:+ INFRAME NA TCGA-KF-A41W-01A-11R-A24X-07 SLC39A14-IL4I1 2 13 chr8:22367408:+ chr19:49896053:- . NA TCGA-KF-A41W-01A-11R-A24X-07 LAMP1-F7 1 14 chr13:113297495:+ chr13:113113847:+ INFRAME NA TCGA-KF-A41W-01A-11R-A24X-07 TSHZ1-RNASEH2B 2 10 chr18:75211916:+ chr13:50927407:+ INFRAME NA TCGA-KF-A41W-01A-11R-A24X-07 SAMD11-PROZ 2 2 chr1:926013:+ chr13:113170413:+ INFRAME NA TCGA-KF-A41W-01A-11R-A24X-07 MCF2L-PCID2 1 5 chr13:113045361:+ chr13:113200516:- INFRAME NA TCGA-KF-A41W-01A-11R-A24X-07 PIK3C3-CTIF 1 2 chr18:41955359:+ chr18:48636614:+ FRAMESHIFT NA TCGA-LI-A67I-01A-31R-A30C-07 AUTS2-ACTR1A 5 13 chr7:69899498:+ chr10:102490613:- INFRAME NA TCGA-LI-A67I-01A-31R-A30C-07 EIF4EBP1-ADAM18 2 6 chr8:38030718:+ chr8:39706790:+ FRAMESHIFT NA TCGA-LI-A9QH-01A-11R-A37L-07 SETD2-CCRL2 58 142 chr3:47097955:- chr3:46407389:+ . Likely Oncogenic NA TCGA-LI-A9QH-01A-11R-A37L-07 FBN1-URI1 34 86 chr15:48644606:- chr19:29985223:+ INFRAME NA TCGA-LI-A9QH-01A-11R-A37L-07 ZNF507-FXYD1 6 28 chr19:32360618:+ chr19:35140076:+ . NA TCGA-LI-A9QH-01A-11R-A37L-07 RB1-DIAPH3 7 21 chr13:48307406:+ chr13:60132989:- INFRAME Likely Oncogenic NA TCGA-LI-A9QH-01A-11R-A37L-07 EPN2-PIBF1 5 14 chr17:19237531:+ chr13:72893784:+ . NA TCGA-LI-A9QH-01A-11R-A37L-07 KDELC2-TAF1D 4 17 chr11:108498165:- chr11:93742898:- . NA TCGA-LI-A9QH-01A-11R-A37L-07 DDX10-AIPL1 2 24 chr11:108723462:+ chr17:6428506:- INFRAME NA TCGA-LI-A9QH-01A-11R-A37L-07 ESD-FAM124A 4 10 chr13:46793397:- chr13:51251468:+ . NA TCGA-LI-A9QH-01A-11R-A37L-07 HIF1A-C14orf37 4 10 chr14:61695839:+ chr14:58139414:- . NA TCGA-LI-A9QH-01A-11R-A37L-07 KLF12-USP32P1 2 10 chr13:73943981:- chr17:16791827:+ . NA TCGA-LI-A9QH-01A-11R-A37L-07 ADAMTS17-SLC12A1 2 8 chr15:100330889:- chr15:48255811:+ INFRAME NA TCGA-LI-A9QH-01A-11R-A37L-07 TIPIN-ATP8B4 3 3 chr15:66356639:- chr15:49934182:- . NA TCGA-LI-A9QH-01A-11R-A37L-07 UVRAG-ACER3 2 6 chr11:76016980:+ chr11:77015016:+ INFRAME NA TCGA-LI-A9QH-01A-11R-A37L-07 CLASP2-STT3B 1 6 chr3:33684359:- chr3:31576396:+ INFRAME NA TCGA-LI-A9QH-01A-11R-A37L-07 ADAMTS2-C5orf60 1 2 chr5:179272911:- chr5:179643490:- . NA TCGA-LI-A9QH-01A-11R-A37L-07 KDSR-ZNF565 1000 1000 chr18:63331534:- chr19:36195156:- . NA TCGA-MB-A5Y9-01A-11R-A29R-07 SKIV2L2-MACROD2 4 3 chr5:55422982:+ chr20:15885764:+ INFRAME NA TCGA-MB-A5Y9-01A-11R-A29R-07 DYNC1H1-MARCH11 3 6 chr14:102028141:+ chr5:16091081:- INFRAME NA TCGA-MB-A5YA-01A-11R-A29R-07 LPAR6-RNASEH2B 11 51 chr13:48412421:- chr13:50927407:+ FRAMESHIFT NA TCGA-MB-A5YA-01A-11R-A29R-07 RNASEH2B-LPAR6 1 28 chr13:50910140:+ chr13:48389812:- . NA TCGA-MB-A5YA-01A-11R-A29R-07 UBR5-PSMB1 2 1 chr8:102412173:- chr6:170549113:- INFRAME NA TCGA-MB-A8JK-01A-11R-A36F-07 NEO1-ZFAT 9 32 chr15:73136027:+ chr8:134657737:- INFRAME NA TCGA-MB-A8JK-01A-11R-A36F-07 NFIX-SEMA3A 3 7 chr19:13025552:+ chr7:83985477:- FRAMESHIFT NA TCGA-MB-A8JK-01A-11R-A36F-07 OXCT1-OR4F17 2 9 chr5:41840451:- chr19:110625:+ . NA TCGA-MB-A8JK-01A-11R-A36F-07 PKN1-DDX39A 1 10 chr19:14452023:+ chr19:14413224:- . NA TCGA-MB-A8JK-01A-11R-A36F-07 CRTAP-EOMES 1 8 chr3:33134265:+ chr3:27720325:- FRAMESHIFT NA TCGA-MB-A8JL-01A-11R-A36F-07 LRIG3-ATP23 61 220 chr12:58913982:- chr12:57945628:+ FRAMESHIFT NA TCGA-MB-A8JL-01A-11R-A36F-07 RBMS1-SLC20A1 4 54 chr2:160493289:- chr2:112662864:+ INFRAME NA TCGA-MB-A8JL-01A-11R-A36F-07 MGA-STRC 5 15 chr15:41621298:+ chr15:43605399:- . Likely Oncogenic NA TCGA-MB-A8JL-01A-11R-A36F-07 PPM1H-PDZRN4 3 15 chr12:62693936:- chr12:41506456:+ INFRAME NA TCGA-MB-A8JL-01A-11R-A36F-07 RBMS1-NT5DC4 3 7 chr2:160493289:- chr2:112721818:+ FRAMESHIFT NA TCGA-MB-A8JL-01A-11R-A36F-07 ADAL-TERB2 1 11 chr15:43345980:+ chr15:44956896:+ INFRAME NA TCGA-MB-A8JL-01A-11R-A36F-07 PIEZO1-KLHDC4 1 11 chr16:88749384:- chr16:87714573:- FRAMESHIFT NA TCGA-MB-A8JL-01A-11R-A36F-07 SHF-MYO18A 1 2 chr15:45171883:- chr17:29167021:- . NA TCGA-MB-A8JL-01A-11R-A36F-07 CILP-IGF2 1000 1000 chr15:65199062:- chr11:2139029:- . NA TCGA-MJ-A68H-01A-11R-A30C-07 CDH2-EPB41L3 13 59 chr18:28147673:- chr18:5489194:- INFRAME NA TCGA-MJ-A68H-01A-11R-A30C-07 HIF3A-DNMT1 7 10 chr19:46334986:+ chr19:10166685:- FRAMESHIFT NA TCGA-MJ-A68H-01A-11R-A30C-07 ZNF846-UNC13A 1 20 chr19:9785926:- chr19:17610099:- . NA TCGA-MJ-A68H-01A-11R-A30C-07 RPS5-SLC27A5 1 15 chr19:58388245:+ chr19:58501410:- FRAMESHIFT NA TCGA-MJ-A68H-01A-11R-A30C-07 SIN3B-C19orf57 2 5 chr19:16841968:+ chr19:13886055:- INFRAME NA TCGA-MJ-A850-01A-11R-A355-07 SS18-SSX1 115 434 chr18:26032399:- chrX:48263782:+ INFRAME NA TCGA-N1-A6IA-01A-12R-A32Q-07 HELZ-OAZ1 7 65 chr17:67203319:- chr19:2272735:+ FRAMESHIFT NA TCGA-N1-A6IA-01A-12R-A32Q-07 TNPO1-ZNF366 10 32 chr5:72861914:+ chr5:72461510:- . NA TCGA-N1-A6IA-01A-12R-A32Q-07 ARMC7-TRIM80P 5 7 chr17:75110606:+ chr17:75074604:+ . NA TCGA-N1-A6IA-01A-12R-A32Q-07 GPATCH8-METTL16 3 12 chr17:44435065:- chr17:2477885:- FRAMESHIFT NA TCGA-N1-A6IA-01A-12R-A32Q-07 MGAT4B-RNF130 2 7 chr5:179798165:- chr5:179920426:- INFRAME NA TCGA-PC-A5DK-01A-11R-A27Q-07 KLHL1-HNRNPF 2 8 chr13:69796738:- chr10:43396590:- . NA TCGA-PC-A5DK-01A-11R-A27Q-07 FLNA-COL6A1 1 6 chrX:154359484:- chr21:45994167:+ FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 VPS29-HSPB8 236 566 chr12:110496012:- chr12:119220714:+ FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 KCNMB4-GLIPR1L2 56 245 chr12:70367070:+ chr12:75422904:+ INFRAME NA TCGA-PC-A5DN-01A-12R-A27Q-07 BEST3-MYRFL 15 53 chr12:69671428:- chr12:69855280:+ FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 COX6A1-PPP1R12A 8 81 chr12:120438229:+ chr12:79872938:- FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 ATF7IP-FAM83B 10 53 chr12:14385400:+ chr6:54939706:+ INFRAME NA TCGA-PC-A5DN-01A-12R-A27Q-07 HSP90B1-MDM2 15 29 chr12:103947430:+ chr12:68835829:+ INFRAME NA TCGA-PC-A5DN-01A-12R-A27Q-07 ANO2-NUDT3 14 28 chr12:5806052:- chr6:34295685:- INFRAME NA TCGA-PC-A5DN-01A-12R-A27Q-07 NUAK1-C12orf65 3 46 chr12:106083864:- chr12:123253647:+ . NA TCGA-PC-A5DN-01A-12R-A27Q-07 YEATS4-PTPRR 9 13 chr12:69370975:+ chr12:70662605:- FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 MAPKAPK5-UNC119B 5 12 chr12:111888618:+ chr12:120719920:+ FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 EIF2B1-DIABLO 3 16 chr12:123620779:- chr12:122218258:- . NA TCGA-PC-A5DN-01A-12R-A27Q-07 TMEM63B-HCG23 5 7 chr6:44141098:+ chr6:32390692:+ . NA TCGA-PC-A5DN-01A-12R-A27Q-07 GTF2H3-NUAK1 5 6 chr12:123633872:+ chr12:106072843:- FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 LRP1-ETV6 2 13 chr12:57145490:+ chr12:11884445:+ INFRAME Likely Oncogenic NA TCGA-PC-A5DN-01A-12R-A27Q-07 C6orf52-DST 3 6 chr6:10694494:- chr6:56900621:- . NA TCGA-PC-A5DN-01A-12R-A27Q-07 SSR1-NTF3 2 6 chr6:7289868:- chr12:5494194:+ FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 MAPKAPK5-PAWR 1 8 chr12:111888618:+ chr12:79613609:- FRAMESHIFT NA TCGA-PC-A5DN-01A-12R-A27Q-07 FAT1-APP 1 2 chr4:186706563:- chr21:26000182:- INFRAME Likely Oncogenic NA TCGA-QC-A6FX-01A-11R-A32Q-07 XYLT1-EEF2KMT 7 22 chr16:17470434:- chr16:5095514:- INFRAME NA TCGA-QC-A6FX-01A-11R-A32Q-07 ANKFN1-PRR11 8 15 chr17:56499098:+ chr17:59169748:+ INFRAME NA TCGA-QC-A6FX-01A-11R-A32Q-07 MRPL18-C6orf118 4 20 chr6:159791126:+ chr6:165290067:- FRAMESHIFT NA TCGA-QC-A6FX-01A-11R-A32Q-07 STXBP5-SASH1 7 6 chr6:147239270:+ chr6:148468545:+ INFRAME NA TCGA-QC-A6FX-01A-11R-A32Q-07 PTRH2-ANKFN1 6 2 chr17:59707371:- chr17:56227917:+ . NA TCGA-QC-A6FX-01A-11R-A32Q-07 ZNF730-CEP89 3 13 chr19:23117176:+ chr19:32901412:- FRAMESHIFT NA TCGA-QC-A6FX-01A-11R-A32Q-07 RHOA-C3orf84 3 9 chr3:49375434:- chr3:49178538:- INFRAME NA TCGA-QC-A6FX-01A-11R-A32Q-07 EPB41L2-ADGB 3 7 chr6:131063155:- chr6:146635375:+ . NA TCGA-QC-A6FX-01A-11R-A32Q-07 RHOA-CCDC71 2 8 chr3:49375434:- chr3:49164260:- . NA TCGA-QC-A6FX-01A-11R-A32Q-07 SEPT9-LGALS3BP 3 4 chr17:77402703:+ chr17:78972574:- FRAMESHIFT NA TCGA-QC-A6FX-01A-11R-A32Q-07 SEPT9-DNAI2 2 6 chr17:77402703:+ chr17:74289594:+ FRAMESHIFT NA TCGA-QC-A6FX-01A-11R-A32Q-07 SNX9-SERAC1 1 6 chr6:157928702:+ chr6:158158364:- . NA TCGA-QC-A6FX-01A-11R-A32Q-07 LACTB-RAB8B 1 1 chr15:63129650:+ chr15:63244756:+ FRAMESHIFT NA TCGA-QC-AA9N-01A-11R-A39D-07 PDS5B-COL4A1 41 74 chr13:32586593:+ chr13:110242734:- . NA TCGA-QC-AA9N-01A-11R-A39D-07 MARCH8-NCAM2 19 55 chr10:45594235:- chr21:21324383:+ . NA TCGA-QC-AA9N-01A-11R-A39D-07 RORA-FSTL1 15 39 chr15:60592387:- chr3:120404971:- FRAMESHIFT NA TCGA-QC-AA9N-01A-11R-A39D-07 NRIP1-CSNK1G1 5 23 chr21:15043495:- chr15:64216713:- . NA TCGA-QC-AA9N-01A-11R-A39D-07 TP53-EFCAB5 3 30 chr17:7687377:- chr17:29993165:+ . Likely Oncogenic NA TCGA-QC-AA9N-01A-11R-A39D-07 FSTL1-RORA 6 5 chr3:120409532:- chr15:60531851:- FRAMESHIFT NA TCGA-QC-AA9N-01A-11R-A39D-07 TIAM1-NCAM2 4 8 chr21:31558927:- chr21:21324383:+ . NA TCGA-QC-AA9N-01A-11R-A39D-07 NCAM2-CBR1 4 7 chr21:21374013:+ chr21:36070092:+ . NA TCGA-QC-AA9N-01A-11R-A39D-07 CNTN1-TMEM117 1 5 chr12:41029219:+ chr12:44376595:+ FRAMESHIFT NA TCGA-QQ-A5V9-01A-11R-A32Q-07 ROCK1-LAMP5 21 40 chr18:21039472:- chr20:9529642:+ INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 NPAT-OAF 3 104 chr11:108222500:- chr11:120225661:+ FRAMESHIFT NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ANLN-TMEM135 11 34 chr7:36439290:+ chr11:87157341:+ INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ZBTB24-STK32C 9 36 chr6:109476175:- chr10:132245955:- INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 SMPX-PDHA1 11 26 chrX:21743750:- chrX:19349312:+ INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 MELTF-DLEU2 10 17 chr3:197003901:- chr13:49997419:- . NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ARHGEF12-CEP164 5 35 chr11:120337275:+ chr11:117338566:+ . NA TCGA-QQ-A5VA-01A-12R-A32Q-07 MAFF-OSBP2 9 16 chr22:38202212:+ chr22:30870429:+ . NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ANO6-EDA 3 23 chr12:45403536:+ chrX:69860857:+ FRAMESHIFT NA TCGA-QQ-A5VA-01A-12R-A32Q-07 SPECC1L-TM6SF1 3 23 chr22:24369320:+ chr15:83127358:+ INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 SCAMP2-CHRNA9 3 16 chr15:74845473:- chr4:40348882:+ FRAMESHIFT NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ZFC3H1-TSPAN8 2 17 chr12:71619315:- chr12:71282819:- . NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ANLN-DGKB 1 20 chr7:36396419:+ chr7:14478225:- FRAMESHIFT NA TCGA-QQ-A5VA-01A-12R-A32Q-07 XKR6-DLGAP2 1 16 chr8:11200576:- chr8:907912:+ INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 SKAP2-CEP126 2 10 chr7:26844030:- chr11:101944265:+ FRAMESHIFT NA TCGA-QQ-A5VA-01A-12R-A32Q-07 BLMH-ABCA9 2 3 chr17:30285388:- chr17:68996014:- INFRAME NA TCGA-QQ-A5VA-01A-12R-A32Q-07 ISPD-ANKMY2 1 2 chr7:16216066:- chr7:16636455:- FRAMESHIFT NA TCGA-QQ-A5VB-01A-11R-A36F-07 MED26-PLCB1 14 34 chr19:16627872:- chr20:8628294:+ INFRAME NA TCGA-QQ-A5VC-01A-31R-A32Q-07 ERC1-MRPS9 25 190 chr12:1371977:+ chr2:105099670:+ FRAMESHIFT NA TCGA-QQ-A5VC-01A-31R-A32Q-07 NEK7-SMYD3 7 26 chr1:198232637:+ chr1:245929937:- INFRAME NA TCGA-QQ-A5VC-01A-31R-A32Q-07 EP400-NOC4L 2 4 chr12:131961954:+ chr12:132150981:+ FRAMESHIFT NA TCGA-QQ-A5VC-01A-31R-A32Q-07 PUM3-KCNV2 1 8 chr9:2828675:- chr9:2729446:+ FRAMESHIFT NA TCGA-QQ-A5VC-01A-31R-A32Q-07 NARS2-RSF1 1 6 chr11:78528842:- chr11:77667491:- FRAMESHIFT NA TCGA-QQ-A5VC-01A-31R-A32Q-07 ZEB1-MSRB2 2 2 chr10:31319292:+ chr10:23110242:+ FRAMESHIFT NA TCGA-QQ-A8VB-01A-11R-A37L-07 CNOT2-TBC1D30 5 4 chr12:70243480:+ chr12:64843380:+ . NA TCGA-QQ-A8VD-01A-42R-A39D-07 SHC1-COL1A2 1 3 chr1:154963329:- chr7:94413690:+ . NA TCGA-QQ-A8VD-01A-42R-A39D-07 HTRA1-COL1A1 1000 1000 chr10:122514489:+ chr17:50197997:- . NA TCGA-QQ-A8VF-01A-11R-A37L-07 PPP1R37-ZNF383 10 50 chr19:45093527:+ chr19:37230409:+ . NA TCGA-QQ-A8VF-01A-11R-A37L-07 ZNF223-AP2A1 7 19 chr19:44055191:+ chr19:49795630:+ INFRAME NA TCGA-QQ-A8VF-01A-11R-A37L-07 CLIP1-RSRC2 4 15 chr12:122340753:- chr12:122508447:- FRAMESHIFT NA TCGA-QQ-A8VF-01A-11R-A37L-07 LIPE-CALM3 3 2 chr19:42412365:- chr19:46605827:+ FRAMESHIFT NA TCGA-QQ-A8VF-01A-11R-A37L-07 ZNF383-CEBPG 1 9 chr19:37218274:+ chr19:33379144:+ . NA TCGA-QQ-A8VF-01A-11R-A37L-07 RUVBL2-CLASRP 2 4 chr19:48993902:+ chr19:45056450:+ . NA TCGA-QQ-A8VF-01A-11R-A37L-07 UACA-ISLR2 1 3 chr15:70660151:- chr15:74131207:+ . NA TCGA-QQ-A8VH-01A-11R-A37L-07 MEG3-SIVA1 2 463 chr14:100831534:+ chr14:104766790:+ . NA TCGA-QQ-A8VH-01A-11R-A37L-07 ATP1B1-DCAF6 5 2 chr1:169111498:+ chr1:167951800:+ INFRAME NA TCGA-QQ-A8VH-01A-11R-A37L-07 CCDC40-PRKG1 1 8 chr17:80038186:+ chr10:52288726:+ FRAMESHIFT NA TCGA-RN-AAAQ-01A-21R-A39D-07 CUX1-POP7 26 132 chr7:102158608:+ chr7:100706821:+ . NA TCGA-RN-AAAQ-01A-21R-A39D-07 UBE3C-TYW1B 12 15 chr7:157187019:+ chr7:72694824:- . NA TCGA-RN-AAAQ-01A-21R-A39D-07 EML1-GPI 3 12 chr14:99793543:+ chr19:34393728:+ INFRAME NA TCGA-RN-AAAQ-01A-21R-A39D-07 NFE2L3-POU6F2 1 8 chr7:26178122:+ chr7:39339642:+ FRAMESHIFT NA TCGA-SG-A6Z4-01A-22R-A33J-07 KLHL26-GATAD2A 2 8 chr19:18637137:+ chr19:19492306:+ INFRAME NA TCGA-SG-A6Z4-01A-22R-A33J-07 FAM214A-CCDC102B 3 2 chr15:52593578:- chr18:69054030:+ INFRAME NA TCGA-SG-A6Z4-01A-22R-A33J-07 NARS2-TENM4 1 1 chr11:78559539:- chr11:78771138:- FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 RAB21-DNM3 54 532 chr12:71755288:+ chr1:172081832:+ INFRAME NA TCGA-SG-A6Z7-01A-12R-A32Q-07 SYT1-EPYC 78 278 chr12:79047362:+ chr12:91002578:- . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 KCNMB4-ARHGAP9 90 167 chr12:70367070:+ chr12:57477269:- INFRAME NA TCGA-SG-A6Z7-01A-12R-A32Q-07 SLC16A7-SYT1 20 116 chr12:59596236:+ chr12:79047297:+ . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 YY1AP1-ARHGEF2 17 76 chr1:155668627:- chr1:155983200:- FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 RAB21-SLC4A8 12 43 chr12:71774022:+ chr12:51469614:+ FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 LINC-PINT-MDM2 10 31 chr7:131107720:- chr12:68824363:+ . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 LGR5-FAM19A2 11 26 chr12:71535186:+ chr12:61867426:- INFRAME NA TCGA-SG-A6Z7-01A-12R-A32Q-07 TSFM-LRRIQ1 5 28 chr12:57787162:+ chr12:85124070:+ FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 ZNF251-CHMP4C 5 18 chr8:144753683:- chr8:81753064:+ INFRAME NA TCGA-SG-A6Z7-01A-12R-A32Q-07 TSFM-METTL11B 2 18 chr12:57787162:+ chr1:170157969:+ . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 RWDD1-CEP85L 1 16 chr6:116584857:+ chr6:118523920:- INFRAME NA TCGA-SG-A6Z7-01A-12R-A32Q-07 RAB21-MGAT4C 3 5 chr12:71774022:+ chr12:86049723:- . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 CPM-DNM3 1 12 chr12:68932678:- chr1:172308728:+ FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 CERK-CELSR1 3 1 chr22:46738007:- chr22:46439411:- INFRAME NA TCGA-SG-A6Z7-01A-12R-A32Q-07 POC1B-TNR 1 9 chr12:89491936:- chr1:175406777:- . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 PLXNA4-TRHDE 1 8 chr7:132576422:- chr12:72286681:+ . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 QSOX1-EDARADD 1 8 chr1:180184050:+ chr1:236468231:+ FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 SLC4A8-MGAT4C 2 4 chr12:51471532:+ chr12:86049723:- . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 FAM157B-RNMT 1 7 chr9:138231103:+ chr18:13762039:+ . NA TCGA-SG-A6Z7-01A-12R-A32Q-07 DNM1L-FGD4 2 2 chr12:32679465:+ chr12:32624422:+ FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 NKAIN2-DCBLD1 1 2 chr6:123804254:+ chr6:117503767:+ FRAMESHIFT NA TCGA-SG-A6Z7-01A-12R-A32Q-07 SLC16A7-EPYC 1000 1000 chr12:59655208:+ chr12:91002535:- . NA TCGA-SG-A849-01A-11R-A355-07 YKT6-EIF3B 63 174 chr7:44201239:+ chr7:2379394:+ FRAMESHIFT NA TCGA-SG-A849-01A-11R-A355-07 FBN1-EIF3B 12 42 chr15:48465568:- chr7:2375389:+ FRAMESHIFT NA TCGA-SG-A849-01A-11R-A355-07 EIF3B-GDI2 8 7 chr7:2379242:+ chr10:5786050:- INFRAME NA TCGA-SG-A849-01A-11R-A355-07 GAS7-ATP8B4 3 6 chr17:10198208:- chr15:49981294:- FRAMESHIFT NA TCGA-SG-A849-01A-11R-A355-07 DOCK7-ADAM32 1 10 chr1:62552732:- chr8:39223040:+ INFRAME NA TCGA-SG-A849-01A-11R-A355-07 PPP2R2A-TM2D2 1 6 chr8:26293740:+ chr8:38995794:- . NA TCGA-SI-A71O-01A-12R-A33J-07 MRPS23-FAM117A 24 27 chr17:57849240:- chr17:49732720:- INFRAME NA TCGA-SI-A71O-01A-12R-A33J-07 COL1A2-CPOX 23 0 chr7:94430220:+ chr3:98580152:- . NA TCGA-SI-A71O-01A-12R-A33J-07 NTM-CTNNA2 8 26 chr11:132212147:+ chr2:79858013:+ INFRAME NA TCGA-SI-A71O-01A-12R-A33J-07 KAT7-F10 7 21 chr17:49798558:+ chr13:113138457:+ FRAMESHIFT NA TCGA-SI-A71O-01A-12R-A33J-07 RALY-ATRN 5 14 chr20:34031604:+ chr20:3535253:+ . NA TCGA-SI-A71O-01A-12R-A33J-07 KDM2A-SLC5A4 3 5 chr11:67180217:+ chr22:32254213:- FRAMESHIFT NA TCGA-SI-A71O-01A-12R-A33J-07 SDHC-F10 3 3 chr1:161328497:+ chr13:113129452:+ FRAMESHIFT NA TCGA-SI-A71O-01A-12R-A33J-07 COL1A2-POSTN 1 8 chr7:94399084:+ chr13:37587986:- INFRAME NA TCGA-SI-A71O-01A-12R-A33J-07 PHF3-SYT4 1 8 chr6:63646795:+ chr18:43274394:- INFRAME NA TCGA-SI-A71O-01A-12R-A33J-07 YLPM1-KHDRBS2 1 6 chr14:74824307:+ chr6:61732764:- FRAMESHIFT NA TCGA-SI-A71O-01A-12R-A33J-07 SLC39A4-APBB1IP 1 3 chr8:144412563:- chr10:26492327:+ FRAMESHIFT NA TCGA-SI-A71O-01A-12R-A33J-07 UBE2D1-MFSD11 1 2 chr10:58335225:+ chr17:76774997:+ FRAMESHIFT NA TCGA-SI-A71P-01A-12R-A33J-07 MYH10-CDKN2A 133 231 chr17:8622902:- chr9:21971208:- INFRAME Likely Oncogenic NA TCGA-SI-A71P-01A-12R-A33J-07 CDKN2A-MYH10 3 11 chr9:21994139:- chr17:8604982:- FRAMESHIFT Likely Oncogenic NA TCGA-SI-A71P-01A-12R-A33J-07 IQCE-TIMP2 1 4 chr7:2590106:+ chr17:78857646:- FRAMESHIFT NA TCGA-SI-A71Q-01A-12R-A33J-07 LAMB1-HBP1 62 186 chr7:107961206:- chr7:107179879:+ . NA TCGA-SI-A71Q-01A-12R-A33J-07 RPL30-PPHLN1 10 181 chr8:98044943:- chr12:42374863:+ INFRAME NA TCGA-SI-A71Q-01A-12R-A33J-07 HNRNPM-DMD 22 56 chr19:8465515:+ chrX:31968514:- INFRAME NA TCGA-SI-A71Q-01A-12R-A33J-07 LONP1-FZR1 7 60 chr19:5694650:- chr19:3535150:+ . NA TCGA-SI-A71Q-01A-12R-A33J-07 C19orf24-CREB3L3 7 27 chr19:1277299:+ chr19:4168351:+ FRAMESHIFT NA TCGA-SI-A71Q-01A-12R-A33J-07 ARHGAP31-CFAP100 6 24 chr3:119295004:+ chr3:126407172:+ INFRAME NA TCGA-SI-A71Q-01A-12R-A33J-07 ERC1-TEKT4P2 5 18 chr12:1083580:+ chr21:9127547:- . NA TCGA-SI-A71Q-01A-12R-A33J-07 SMIM7-EPS15L1 4 17 chr19:16647120:- chr19:16418104:- . NA TCGA-SI-A71Q-01A-12R-A33J-07 CD83-EHF 5 10 chr6:14118065:+ chr11:34642628:+ INFRAME NA TCGA-SI-A71Q-01A-12R-A33J-07 MIB1-MAU2 1 9 chr18:21705123:+ chr19:19335718:+ . NA TCGA-SI-A71Q-01A-12R-A33J-07 VCAN-EDIL3 3 1 chr5:83493931:+ chr5:83963360:- FRAMESHIFT NA TCGA-SI-A71Q-01A-12R-A33J-07 ZNF268-LPAR1 2 4 chr12:133182030:+ chr9:110942168:- INFRAME NA TCGA-SI-A71Q-01A-12R-A33J-07 NAT10-METTL15 2 1 chr11:34123855:+ chr11:28398788:+ . NA TCGA-SI-A71Q-01A-12R-A33J-07 LRRCC1-SAYSD1 1 3 chr8:85110180:+ chr6:39105776:- FRAMESHIFT NA TCGA-SI-AA8B-01A-11R-A38C-07 RUBCNL-CUBN 21 115 chr13:46387677:- chr10:16851443:- . NA TCGA-SI-AA8B-01A-11R-A38C-07 PTPRM-DLGAP1-AS5 17 38 chr18:7955414:+ chr18:4293160:+ . NA TCGA-SI-AA8B-01A-11R-A38C-07 CDK8-GCNT7 8 38 chr13:26353880:+ chr20:56495297:- FRAMESHIFT NA TCGA-SI-AA8B-01A-11R-A38C-07 RORA-PTPN9 4 9 chr15:60592387:- chr15:75506003:- FRAMESHIFT NA TCGA-SI-AA8B-01A-11R-A38C-07 COMMD7-DUSP15 1 20 chr20:32743308:- chr20:31869597:- INFRAME NA TCGA-SI-AA8B-01A-11R-A38C-07 RB1-RUBCNL 2 15 chr13:48381443:+ chr13:46344831:- INFRAME Likely Oncogenic NA TCGA-SI-AA8B-01A-11R-A38C-07 C1orf21-ANGPTL1 3 10 chr1:184477603:+ chr1:178853787:- INFRAME NA TCGA-SI-AA8B-01A-11R-A38C-07 PHACTR3-BCAS1 3 5 chr20:59577617:+ chr20:54058723:- . NA TCGA-SI-AA8B-01A-11R-A38C-07 MAD1L1-RPA3 1 3 chr7:2014502:- chr7:7641175:- . NA TCGA-SI-AA8B-01A-11R-A38C-07 WDR45B-SEPT9 1 2 chr17:82643949:- chr17:77482144:+ INFRAME NA TCGA-SI-AA8C-01A-11R-A38C-07 PPP2R2D-RGS10 34 80 chr10:131901330:+ chr10:119527424:- INFRAME NA TCGA-SI-AA8C-01A-11R-A38C-07 PSMF1-CHST8 19 47 chr20:1125650:+ chr19:33689176:+ . NA TCGA-SI-AA8C-01A-11R-A38C-07 ARHGAP24-MAPK10 3 18 chr4:85942273:+ chr4:86017370:- FRAMESHIFT NA TCGA-SI-AA8C-01A-11R-A38C-07 LRP5L-SGSM3 3 13 chr22:25375813:- chr22:40400696:+ . NA TCGA-SI-AA8C-01A-11R-A38C-07 KLF12-UCHL3 1 6 chr13:73943981:- chr13:75560753:+ INFRAME NA TCGA-SI-AA8C-01A-11R-A38C-07 ITM2C-COL1A2 1 2 chr2:230875808:+ chr7:94414222:+ INFRAME NA TCGA-UE-A6QU-01A-12R-A32Q-07 GNL3L-GABRB3 13 85 chrX:54532585:+ chr15:26583414:- FRAMESHIFT NA TCGA-VT-A80G-01A-11R-A36F-07 UBP1-SLC24A3 19 57 chr3:33409236:- chr20:19584971:+ INFRAME NA TCGA-VT-A80G-01A-11R-A36F-07 PPP4R1-NUP93 9 79 chr18:9614226:- chr16:56823707:+ FRAMESHIFT NA TCGA-VT-A80G-01A-11R-A36F-07 SUPT20H-POSTN 12 34 chr13:37029765:- chr13:37564560:- FRAMESHIFT NA TCGA-VT-A80G-01A-11R-A36F-07 TMEM9B-PSIP1 7 51 chr11:8962092:- chr9:15490124:- INFRAME NA TCGA-VT-A80G-01A-11R-A36F-07 XXYLT1-ETV5 7 6 chr3:195156449:- chr3:186066072:- INFRAME NA TCGA-VT-A80G-01A-11R-A36F-07 LRAT-NAALADL2 3 21 chr4:154636396:+ chr3:175096790:+ . NA TCGA-VT-A80G-01A-11R-A36F-07 ATRX-SNTB2 5 10 chrX:77697583:- chr16:69270143:+ INFRAME Likely Oncogenic NA TCGA-VT-A80G-01A-11R-A36F-07 ITGAV-ARHGAP15 1 18 chr2:186669814:+ chr2:143228581:+ FRAMESHIFT NA TCGA-VT-A80G-01A-11R-A36F-07 SNTB2-NUP93 1 5 chr16:69270285:+ chr16:56818664:+ FRAMESHIFT NA TCGA-VT-A80G-01A-11R-A36F-07 GLIS3-IL17REL 1 4 chr9:3932360:- chr22:50001231:- . NA TCGA-VT-A80G-01A-11R-A36F-07 ZNF721-CHL1 1 3 chr4:435770:- chr3:244613:+ . NA TCGA-VT-A80J-01A-11R-A36F-07 PNPLA8-SEM1 12 138 chr7:108526029:- chr7:96694891:- . NA TCGA-VT-A80J-01A-11R-A36F-07 ATF6-TENM3 12 12 chr1:161792327:+ chr4:182600924:+ INFRAME NA TCGA-VT-A80J-01A-11R-A36F-07 PPFIA1-BBOX1 7 12 chr11:70356254:+ chr11:27115452:+ INFRAME NA TCGA-VT-A80J-01A-11R-A36F-07 MYO5A-NEDD4 5 14 chr15:52340196:- chr15:55924699:- INFRAME NA TCGA-VT-A80J-01A-11R-A36F-07 SMAD3-INTS14 5 14 chr15:67066360:+ chr15:65584888:- FRAMESHIFT Likely Oncogenic NA TCGA-VT-A80J-01A-11R-A36F-07 GNG12-PLXNA2 2 5 chr1:67833344:- chr1:208084580:- . NA TCGA-VT-A80J-01A-11R-A36F-07 MGA-CHP1 1 6 chr15:41621298:+ chr15:41270557:+ . Likely Oncogenic NA TCGA-VT-A80J-01A-11R-A36F-07 MOSPD2-ARHGAP6 1 3 chrX:14873758:+ chrX:11182118:- INFRAME NA TCGA-VT-A80J-01A-11R-A36F-07 HSPB11-CACHD1 1 2 chr1:53939985:- chr1:64679595:+ FRAMESHIFT NA TCGA-VT-AB3D-01A-12R-A41I-07 BCL9-C1orf21 3 12 chr1:147615902:+ chr1:184619518:+ INFRAME NA TCGA-WK-A8XO-01A-11R-A37L-07 TMTC3-PRRC2C 22 105 chr12:88176319:+ chr1:171591587:+ FRAMESHIFT NA TCGA-WK-A8XO-01A-11R-A37L-07 SENP6-AKIRIN2 15 55 chr6:75678927:+ chr6:87675607:- FRAMESHIFT NA TCGA-WK-A8XO-01A-11R-A37L-07 CEP290-FGGY 8 61 chr12:88089032:- chr1:59625988:+ INFRAME NA TCGA-WK-A8XO-01A-11R-A37L-07 ZNF418-MYO9B 4 18 chr19:57927977:- chr19:17209586:+ FRAMESHIFT NA TCGA-WK-A8XO-01A-11R-A37L-07 CNOT2-CEP290 3 20 chr12:70278274:+ chr12:88089487:- INFRAME NA TCGA-WK-A8XO-01A-11R-A37L-07 RAB3IP-NUCB2 4 13 chr12:69739031:+ chr11:17282789:+ . NA TCGA-WK-A8XO-01A-11R-A37L-07 B4GALNT1-EPYC 4 9 chr12:57631915:- chr12:91002578:- . NA TCGA-WK-A8XO-01A-11R-A37L-07 MDM2-PTPRR 1 10 chr12:68813628:+ chr12:70684783:- FRAMESHIFT NA TCGA-WK-A8XO-01A-11R-A37L-07 MDM2-IL22 1 7 chr12:68828931:+ chr12:68248876:- INFRAME NA TCGA-WK-A8XO-01A-11R-A37L-07 NTN4-CCT2 2 1 chr12:95713212:- chr12:69597156:+ INFRAME NA TCGA-WK-A8XO-01A-11R-A37L-07 ELK3-NUP107 1 4 chr12:96247734:+ chr12:68731110:+ INFRAME NA TCGA-WK-A8XO-01A-11R-A37L-07 PPP2CA-PDLIM4 1 3 chr5:134225760:- chr5:132262609:+ INFRAME NA TCGA-WK-A8XS-01A-11R-A37L-07 CALCOCO2-WRAP53 44 153 chr17:48856187:+ chr17:7700741:+ INFRAME NA TCGA-WK-A8XS-01A-11R-A37L-07 EFCAB13-NPEPPS 7 24 chr17:47374966:+ chr17:47612460:+ INFRAME NA TCGA-WK-A8XS-01A-11R-A37L-07 COG4-PMFBP1 7 14 chr16:70512239:- chr16:72154459:- INFRAME NA TCGA-WK-A8XS-01A-11R-A37L-07 SNX30-SEC16A 4 7 chr9:112804967:+ chr9:136443900:- INFRAME NA TCGA-WK-A8XS-01A-11R-A37L-07 CRYL1-MLNR 2 12 chr13:20525754:- chr13:49222040:+ FRAMESHIFT NA TCGA-WK-A8XT-01A-11R-A37L-07 SS18-SSX2 63 114 chr18:26032399:- chrX:52700578:- INFRAME NA TCGA-WK-A8XX-01A-11R-A37L-07 MPDU1-SPEM1 8 24 chr17:7583965:+ chr17:7420627:+ INFRAME NA TCGA-WK-A8XX-01A-11R-A37L-07 RNF217-ANKRD6 8 21 chr6:124963426:+ chr6:89629112:+ INFRAME NA TCGA-WK-A8XX-01A-11R-A37L-07 JPH2-RNF20 3 10 chr20:44159618:- chr9:101535398:+ . NA TCGA-WK-A8XX-01A-11R-A37L-07 PPARA-NFIC 3 7 chr22:46151970:+ chr19:3456550:+ . NA TCGA-WK-A8XX-01A-11R-A37L-07 NUP58-SPATA13 2 6 chr13:25315467:+ chr13:24222819:+ . NA TCGA-WK-A8XX-01A-11R-A37L-07 TMEM147-LLGL1 2 4 chr19:35545816:+ chr17:18229941:+ FRAMESHIFT NA TCGA-WK-A8Y0-01A-11R-A41I-07 DHX8-SPACA3 130 579 chr17:43484185:+ chr17:32996843:+ INFRAME NA TCGA-WK-A8Y0-01A-11R-A41I-07 ACLY-TAF15 84 526 chr17:41897749:- chr17:35836132:+ INFRAME NA TCGA-WK-A8Y0-01A-11R-A41I-07 ALKBH5-NUF2 2 24 chr17:18185013:+ chr1:163336751:+ FRAMESHIFT NA TCGA-WK-A8Y0-01A-11R-A41I-07 SOCS6-PMS1 2 6 chr18:70289090:+ chr2:189873496:+ . NA TCGA-WK-A8Y0-01A-11R-A41I-07 ATP6V0A1-THCAT158 1 6 chr17:42501304:+ chr17:47303782:- . NA TCGA-WP-A9GB-01A-11R-A37L-07 TNS1-DIRC3 17 81 chr2:217978765:- chr2:217284863:- . NA TCGA-WP-A9GB-01A-11R-A37L-07 GNAO1-FTO 1 55 chr16:56192616:+ chr16:53933985:+ FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 USP48-KALRN 6 16 chr1:21701498:- chr3:124562843:+ INFRAME NA TCGA-WP-A9GB-01A-11R-A37L-07 MEIS2-BBS2 5 14 chr15:36950324:- chr16:56511284:- FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 CLPTM1-NECTIN2 2 13 chr19:44955467:+ chr19:44865271:+ FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 XPNPEP1-FAM13B 2 11 chr10:109915011:- chr5:137962469:- FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 BBS2-C15orf41 3 5 chr16:56519746:- chr15:36654098:+ FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 DAAM1-MNAT1 1 13 chr14:59331920:+ chr14:60879714:+ INFRAME NA TCGA-WP-A9GB-01A-11R-A37L-07 MYLK-USP48 3 5 chr3:123793677:- chr1:21690099:- INFRAME NA TCGA-WP-A9GB-01A-11R-A37L-07 TTC1-MED4 1 10 chr5:160010858:+ chr13:48090418:- FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 CYSTM1-MYLK 2 3 chr5:140194652:+ chr3:123752538:- FRAMESHIFT NA TCGA-WP-A9GB-01A-11R-A37L-07 AMFR-FTO 1 4 chr16:56367444:- chr16:53933985:+ INFRAME NA TCGA-WP-A9GB-01A-11R-A37L-07 INO80-CYSTM1 1000 1000 chr15:41044905:- chr5:140281496:+ . NA TCGA-X2-A95T-01A-11R-A37L-07 RB1-TEX21P 7 29 chr13:48381443:+ chr14:64346428:- . Likely Oncogenic NA TCGA-X2-A95T-01A-11R-A37L-07 SLC4A1AP-ZNF512 2 37 chr2:27675692:+ chr2:27615168:+ INFRAME NA TCGA-X2-A95T-01A-11R-A37L-07 FAM98C-PPP5C 4 9 chr19:38403694:+ chr19:46375604:+ FRAMESHIFT NA TCGA-X2-A95T-01A-11R-A37L-07 SH3YL1-MTHFD1L 3 11 chr2:229966:- chr6:150922205:+ FRAMESHIFT NA TCGA-X2-A95T-01A-11R-A37L-07 RB1-ESR2 1 3 chr13:48381443:+ chr14:64283075:- . Likely Oncogenic NA TCGA-X6-A7W8-01A-21R-A355-07 FAM222B-PRPSAP1 12 41 chr17:28842682:- chr17:76313891:- . NA TCGA-X6-A7W8-01A-21R-A355-07 PAN3-MICU2 9 5 chr13:28220378:+ chr13:21522650:- INFRAME NA TCGA-X6-A7W8-01A-21R-A355-07 PIEZO2-IMPA2 5 19 chr18:10672690:- chr18:12030343:+ INFRAME NA TCGA-X6-A7W8-01A-21R-A355-07 ARFGEF2-TTLL9 6 8 chr20:49017550:+ chr20:31922963:+ INFRAME NA TCGA-X6-A7W8-01A-21R-A355-07 MAP3K14-SRP68 2 8 chr17:45284812:- chr17:76067330:- INFRAME NA TCGA-X6-A7W8-01A-21R-A355-07 ACACA-PARD6G 2 5 chr17:37358999:- chr18:80202932:- . NA TCGA-X6-A7WA-01A-12R-A355-07 PLEKHA1-CAP1P2 15 54 chr10:122413047:+ chr10:43605699:- . NA TCGA-X6-A7WA-01A-12R-A355-07 PDZD8-CACUL1 14 28 chr10:117318872:- chr10:118674460:- . NA TCGA-X6-A7WA-01A-12R-A355-07 S1PR5-CDC37 1 4 chr19:10517398:- chr19:10396203:- . NA TCGA-X6-A7WA-01A-12R-A355-07 PLEKHS1-BTBD16 1 2 chr10:113769900:+ chr10:122329480:+ FRAMESHIFT NA TCGA-X6-A7WA-01A-12R-A355-07 ZNF239-ARMS2 1 2 chr10:43567899:- chr10:122456907:+ . NA TCGA-X6-A7WB-01A-11R-A355-07 KLF12-CAMK2G 14 26 chr13:73943981:- chr10:73817554:- FRAMESHIFT NA TCGA-X6-A7WB-01A-11R-A355-07 CAMK2G-BMS1P4 11 24 chr10:73847225:- chr10:73705078:- . NA TCGA-X6-A7WB-01A-11R-A355-07 WDFY2-STK26 5 33 chr13:51584824:+ chrX:132054631:+ FRAMESHIFT NA TCGA-X6-A7WB-01A-11R-A355-07 GLTSCR1L-TMEM217 8 6 chr6:42782101:+ chr6:37219041:- . NA TCGA-X6-A7WB-01A-11R-A355-07 PPARD-SLC22A7 3 16 chr6:35411217:+ chr6:43299898:+ INFRAME NA TCGA-X6-A7WC-01A-12R-A355-07 NEURL4-SOX15 15 27 chr17:7326255:- chr17:7589738:- . NA TCGA-X6-A7WC-01A-12R-A355-07 ARHGEF17-AAMDC 12 14 chr11:73311830:+ chr11:77842479:+ INFRAME NA TCGA-X6-A7WC-01A-12R-A355-07 SENP3-NLGN2 9 22 chr17:7565764:+ chr17:7405034:+ . NA TCGA-X6-A7WC-01A-12R-A355-07 WRN-WDR70 3 20 chr8:31083779:+ chr5:37697655:+ INFRAME NA TCGA-X6-A7WC-01A-12R-A355-07 TNIP1-SGCD 2 13 chr5:151039097:- chr5:156123856:+ . NA TCGA-X6-A7WC-01A-12R-A355-07 ZNF431-EPS15L1 3 7 chr19:21143643:+ chr19:16417637:- INFRAME NA TCGA-X6-A7WC-01A-12R-A355-07 TTLL4-DHRSX 2 3 chr2:218711037:+ chrY:2291603:- . NA TCGA-X6-A7WC-01A-12R-A355-07 VWCE-SH3D19 1 7 chr11:61280624:- chr4:151176955:- FRAMESHIFT NA TCGA-X6-A7WC-01A-12R-A355-07 ZNF131-GHR 2 3 chr5:43068217:+ chr5:42688890:+ . NA TCGA-X6-A7WC-01A-12R-A355-07 SGCD-HMMR 1 3 chr5:156595051:+ chr5:163463856:+ INFRAME NA TCGA-X6-A7WC-01A-12R-A355-07 ZNF398-TPK1 1 2 chr7:149147766:+ chr7:144835618:- . NA TCGA-X6-A8C2-01A-11R-A36F-07 CLTC-DNAH17 17 62 chr17:59620173:+ chr17:78515022:- INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 MTMR12-MAEL 9 39 chr5:32312758:- chr1:166992686:+ FRAMESHIFT NA TCGA-X6-A8C2-01A-11R-A36F-07 PRRC2A-TREM2 3 32 chr6:31620858:+ chr6:41159882:- . NA TCGA-X6-A8C2-01A-11R-A36F-07 MTFR1-LIG1 4 19 chr8:65693759:+ chr19:48143963:- INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 TNFAIP6-ORC4 4 17 chr2:151357760:+ chr2:147938393:- INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 ZNF595-RAB28 6 7 chr4:53491:+ chr4:13381594:- INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 DPH6-COX5A 1 19 chr15:35410835:- chr15:74920442:- INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 SCAMP2-SLCO3A1 1 11 chr15:74873199:- chr15:92094881:+ FRAMESHIFT NA TCGA-X6-A8C2-01A-11R-A36F-07 LYRM7-SLC6A7 3 2 chr5:131171038:+ chr5:150194728:+ INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 TANK-CACNB4 2 6 chr2:161160486:+ chr2:151883370:- . NA TCGA-X6-A8C2-01A-11R-A36F-07 BACH2-BIVM 2 4 chr6:90206569:- chr13:102816428:+ . NA TCGA-X6-A8C2-01A-11R-A36F-07 NFATC2IP-KIAA0556 2 4 chr16:28952204:+ chr16:27749584:+ INFRAME NA TCGA-X6-A8C2-01A-11R-A36F-07 ARHGEF6-NDC1 1 6 chrX:136732102:- chr1:53809746:- FRAMESHIFT NA TCGA-X6-A8C2-01A-11R-A36F-07 RIF1-TNFAIP6 1 4 chr2:151469864:+ chr2:151363943:+ FRAMESHIFT NA TCGA-X6-A8C2-01A-11R-A36F-07 KDM4C-PSPH 1 3 chr9:7049200:+ chr7:56034103:- . NA TCGA-X6-A8C3-01A-11R-A36F-07 RORA-LOXL1 23 92 chr15:60592387:- chr15:73942854:+ INFRAME NA TCGA-X6-A8C3-01A-11R-A36F-07 ENOSF1-PPT1 14 121 chr18:706470:- chr1:40092507:- INFRAME NA TCGA-X6-A8C3-01A-11R-A36F-07 PRPF19-NLRP14 6 10 chr11:60900582:- chr11:7038566:+ . NA TCGA-X6-A8C3-01A-11R-A36F-07 MACF1-SHISA6 3 11 chr1:39258028:+ chr17:11379414:+ FRAMESHIFT NA TCGA-X6-A8C3-01A-11R-A36F-07 RABGEF1-CPED1 3 11 chr7:66712224:+ chr7:121015665:+ . NA TCGA-X6-A8C3-01A-11R-A36F-07 SDHAF2-TPH1 2 8 chr11:61438113:+ chr11:18040788:- INFRAME NA TCGA-X6-A8C3-01A-11R-A36F-07 FAM168A-OSBPL5 1 6 chr11:73468405:- chr11:3119631:- FRAMESHIFT NA TCGA-X6-A8C3-01A-11R-A36F-07 ITGA4-UBE2E3 1 2 chr2:181482651:+ chr2:181060665:+ INFRAME NA TCGA-X6-A8C4-01A-11R-A36F-07 MPDU1-DNAH9 6 39 chr17:7583965:+ chr17:11886825:+ INFRAME NA TCGA-X6-A8C4-01A-11R-A36F-07 GALNT11-PTPRN2 2 10 chr7:152025884:+ chr7:158489785:- . NA TCGA-X6-A8C4-01A-11R-A36F-07 TUBGCP6-TCF7L1 2 6 chr22:50229404:- chr2:85302484:+ INFRAME NA TCGA-X6-A8C4-01A-11R-A36F-07 RAB21-CRADD 2 4 chr12:71782658:+ chr12:93859319:+ INFRAME NA TCGA-X6-A8C4-01A-11R-A36F-07 TP53-MYH2 1 8 chr17:7687377:- chr17:10549417:- . Likely Oncogenic NA TCGA-X6-A8C4-01A-11R-A36F-07 DHX40-UNC45B 1 7 chr17:59588053:+ chr17:35148261:+ . NA TCGA-X6-A8C5-01A-11R-A36F-07 ZNF177-TECR 16 46 chr19:9364948:+ chr19:14562525:+ . NA TCGA-X6-A8C5-01A-11R-A36F-07 ZFYVE28-CRMP1 4 17 chr4:2418285:- chr4:5856307:- FRAMESHIFT NA TCGA-X6-A8C5-01A-11R-A36F-07 MYH10-OLFM4 5 12 chr17:8630654:- chr13:53034348:+ . NA TCGA-X6-A8C5-01A-11R-A36F-07 EVC2-TMED11P 5 10 chr4:5663107:- chr4:1116410:- . NA TCGA-X6-A8C6-01A-11R-A36F-07 TP53-DNAH2 12 135 chr17:7687377:- chr17:7830300:+ . Likely Oncogenic NA TCGA-X6-A8C6-01A-11R-A36F-07 CD44-EXT2 30 40 chr11:35139370:+ chr11:44244149:+ FRAMESHIFT NA TCGA-X6-A8C6-01A-11R-A36F-07 LAMB1-NRCAM 11 26 chr7:107986022:- chr7:108160492:- INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 KIDINS220-COLEC11 7 18 chr2:8750112:- chr2:3604315:+ FRAMESHIFT NA TCGA-X6-A8C6-01A-11R-A36F-07 CASC4-LRRC8D 6 17 chr15:44338317:+ chr1:89933067:+ . NA TCGA-X6-A8C6-01A-11R-A36F-07 CTPS2-RGN 3 29 chrX:16698238:- chrX:47081128:+ . NA TCGA-X6-A8C6-01A-11R-A36F-07 EMC7-CD27 6 16 chr15:34095895:- chr12:6445424:+ FRAMESHIFT NA TCGA-X6-A8C6-01A-11R-A36F-07 FBXO8-PALLD 7 9 chr4:174283410:- chr4:168668190:+ . NA TCGA-X6-A8C6-01A-11R-A36F-07 REPS2-GLRA2 4 12 chrX:17103779:+ chrX:14690710:+ INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 HIRA-NSMCE2 3 15 chr22:19431440:- chr8:125357219:+ INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 DERA-CA3 2 16 chr12:15911414:+ chr8:85439712:+ INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 LIMK1-SEM1 3 12 chr7:74109036:+ chr7:96694891:- FRAMESHIFT NA TCGA-X6-A8C6-01A-11R-A36F-07 LIMK1-GNAT3 4 6 chr7:74115958:+ chr7:80494647:- INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 R3HDM2-NTN4 3 9 chr12:57395749:- chr12:95683711:- . NA TCGA-X6-A8C6-01A-11R-A36F-07 SUCO-DENND1B 3 7 chr1:172578389:+ chr1:197772932:- FRAMESHIFT NA TCGA-X6-A8C6-01A-11R-A36F-07 COLEC11-PINX1 2 8 chr2:3604470:+ chr8:10834775:- INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 FSD1L-OTUD7B 2 5 chr9:105448235:+ chr1:149977576:- . NA TCGA-X6-A8C6-01A-11R-A36F-07 UCK2-PBX1 2 4 chr1:165891322:+ chr1:164563238:+ INFRAME NA TCGA-X6-A8C6-01A-11R-A36F-07 KIDINS220-PINX1 1 6 chr2:8750112:- chr8:10834775:- FRAMESHIFT NA TCGA-X6-A8C6-01A-11R-A36F-07 CRACR2A-SYT10 1 5 chr12:3696772:- chr12:33426495:- FRAMESHIFT NA TCGA-X6-A8C7-01A-11R-A36F-07 SS18-SSX1 84 344 chr18:26032399:- chrX:48263782:+ INFRAME NA TCGA-X6-A8C7-01A-11R-A36F-07 GSE1-LBP 10 38 chr16:85171807:+ chr20:38376625:+ INFRAME NA TCGA-X9-A971-01A-11R-A38C-07 NKD1-SPATC1L 6 39 chr16:50549555:+ chr21:46168658:- FRAMESHIFT NA TCGA-X9-A971-01A-11R-A38C-07 PEAK1-ZBTB25 8 13 chr15:77420006:- chr14:64449638:- . NA TCGA-X9-A971-01A-11R-A38C-07 ZFP3-DGCR2 3 10 chr17:5078575:+ chr22:19068225:- . NA TCGA-X9-A971-01A-11R-A38C-07 PELI2-FOXN3 3 7 chr14:56118737:+ chr14:89412490:- . NA TCGA-X9-A971-01A-11R-A38C-07 PEAK1-TEX21P 1 7 chr15:77420006:- chr14:64354922:- . NA TCGA-X9-A971-01A-11R-A38C-07 CBFA2T2-SNTA1 1 6 chr20:33490301:+ chr20:33439026:- INFRAME NA TCGA-Z4-A8JB-01A-23R-A37L-07 COL6A2-PSMD4 7 1 chr21:46122148:+ chr1:151267191:+ FRAMESHIFT NA TCGA-Z4-A8JB-01A-23R-A37L-07 ZNF469-COL1A1 1000 1000 chr16:88440091:+ chr17:50197033:- . NA TCGA-Z4-A9VC-01A-11R-A37L-07 DDIT3-FUS 3 23 chr12:57520418:- chr16:31189665:+ . NA TCGA-Z4-AAPF-01A-11R-A39D-07 SS18-SSX2 47 83 chr18:26032399:- chrX:52700578:- INFRAME NA TCGA-3N-A9WB-06A-11R-A38C-07 GARS-HOXA13 5 33 chr7:30612245:+ chr7:27198442:- FRAMESHIFT NA TCGA-3N-A9WB-06A-11R-A38C-07 SRGAP2C-NTNG1 4 3 chr1:121324640:+ chr1:107324282:+ INFRAME NA TCGA-3N-A9WC-06A-11R-A38C-07 AIF1L-NRSN2 12 30 chr9:131096863:+ chr20:349249:+ . NA TCGA-3N-A9WC-06A-11R-A38C-07 DESI2-PGBD5 12 15 chr1:244653355:+ chr1:230357321:- FRAMESHIFT NA TCGA-3N-A9WC-06A-11R-A38C-07 FOXK2-MS4A12 11 18 chr17:82563548:+ chr11:60497313:+ . NA TCGA-3N-A9WC-06A-11R-A38C-07 STK32A-PDXDC1 2 5 chr5:147361614:+ chr16:15016129:+ FRAMESHIFT NA TCGA-3N-A9WC-06A-11R-A38C-07 NRSN2-OSBPL1A 2 3 chr20:347142:+ chr18:24196200:- . NA TCGA-3N-A9WC-06A-11R-A38C-07 CDK13-YAE1D1 1 5 chr7:40002031:+ chr7:39570506:+ FRAMESHIFT NA TCGA-3N-A9WC-06A-11R-A38C-07 MYO1E-ADAM10 1 1 chr15:59372498:- chr15:58717727:- FRAMESHIFT NA TCGA-D3-A1Q1-06A-21R-A18T-07 USP10-ATP2C2 22 32 chr16:84740369:+ chr16:84408405:+ FRAMESHIFT NA TCGA-D3-A1Q1-06A-21R-A18T-07 ATG101-CSRNP2 11 25 chr12:52070483:+ chr12:51076647:- . NA TCGA-D3-A1Q1-06A-21R-A18T-07 RIMKLB-ELP3 7 26 chr12:8714041:+ chr8:28097219:+ INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 WDR70-AGXT2 13 108 chr5:37396570:+ chr5:35014119:- INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 RAI14-MAPK9 18 67 chr5:34757598:+ chr5:180269409:- INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 MED15-AHRR 9 85 chr22:20555148:+ chr5:376610:+ INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 PI4KA-CDH10 16 34 chr22:20793193:- chr5:24537674:- INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 UFD1L-PLEKHG4B 6 32 chr22:19479083:- chr5:181514:+ FRAMESHIFT NA TCGA-D3-A1Q3-06A-11R-A18T-07 PI4KA-MYO18B 2 26 chr22:20761304:- chr22:25781734:+ FRAMESHIFT NA TCGA-D3-A1Q3-06A-11R-A18T-07 C5orf42-SEMA5A 4 11 chr5:37165539:- chr5:9237890:- INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 DDX17-CDH10 1 22 chr22:38492056:- chr5:24498519:- INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 DGCR2-IRX4 3 7 chr22:19122128:- chr5:1882747:- . NA TCGA-D3-A1Q3-06A-11R-A18T-07 NIPBL-ROPN1L 2 10 chr5:36976402:+ chr5:10442127:+ . NA TCGA-D3-A1Q3-06A-11R-A18T-07 SHANK3-MAPK1 1 13 chr22:50676693:+ chr22:21799128:- INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 OXCT1-GHR 1 7 chr5:41840451:- chr5:42565864:+ FRAMESHIFT NA TCGA-D3-A1Q3-06A-11R-A18T-07 HCN1-SPEF2 1 6 chr5:45645185:- chr5:35667072:+ INFRAME NA TCGA-D3-A1Q3-06A-11R-A18T-07 DAP-CDH12 1 4 chr5:10748175:- chr5:22212639:- . NA TCGA-D3-A1Q4-06A-11R-A18T-07 SEMA3C-PPP1R12C 8 174 chr7:80789306:- chr19:55103568:- INFRAME NA TCGA-D3-A1Q4-06A-11R-A18T-07 WWP1-ESRP1 20 36 chr8:86342930:+ chr8:94662501:+ . NA TCGA-D3-A1Q4-06A-11R-A18T-07 NDUFAF6-LRRCC1 4 39 chr8:94980973:+ chr8:85129919:+ . NA TCGA-D3-A1Q4-06A-11R-A18T-07 PPP1R12C-RPL28 1 22 chr19:55112467:- chr19:55402943:+ FRAMESHIFT NA TCGA-D3-A1Q4-06A-11R-A18T-07 C10orf90-ADAM12 1 1 chr10:126670241:- chr10:126330509:- . NA TCGA-D3-A1Q5-06A-11R-A18T-07 ERBIN-ARL15 1 47 chr5:66014725:+ chr5:53886713:- FRAMESHIFT NA TCGA-D3-A1Q5-06A-11R-A18T-07 PLXDC2-THNSL1 1 11 chr10:19817191:+ chr10:25021742:+ . NA TCGA-D3-A1Q6-06A-11R-A18T-07 MLLT3-DENND4C 2 16 chr9:20620654:- chr9:19276158:+ . NA TCGA-D3-A1Q7-06A-11R-A18T-07 WTAP-MAS1 5 22 chr6:159739045:+ chr6:159906920:+ . NA TCGA-D3-A1Q9-06A-11R-A18T-07 ERC1-METTL4 57 230 chr12:1236904:+ chr18:2567654:- . NA TCGA-D3-A1Q9-06A-11R-A18T-07 RBM39-EDEM2 9 111 chr20:35738968:- chr20:35131783:- FRAMESHIFT NA TCGA-D3-A1Q9-06A-11R-A18T-07 KDM5A-IQSEC3 2 34 chr12:333487:- chr12:157025:+ FRAMESHIFT NA TCGA-D3-A1Q9-06A-11R-A18T-07 EIF2S2-KCNB1 4 18 chr20:34093675:- chr20:49310799:- . NA TCGA-D3-A1Q9-06A-11R-A18T-07 GRIK4-EHBP1L1 6 6 chr11:120511887:+ chr11:65589751:+ . NA TCGA-D3-A1Q9-06A-11R-A18T-07 POFUT1-PRICKLE2 3 13 chr20:32216721:+ chr3:64198967:- INFRAME NA TCGA-D3-A1Q9-06A-11R-A18T-07 CD9-C6 2 5 chr12:6225534:+ chr5:41186208:- FRAMESHIFT NA TCGA-D3-A1QB-06A-11R-A18T-07 SHANK1-IGHJ6 9 0 chr19:50668011:- chr14:105863239:- INFRAME NA TCGA-D3-A2J6-06A-11R-A18T-07 DBT-CCDC18 135 201 chr1:100218644:- chr1:93180054:+ . NA TCGA-D3-A2J6-06A-11R-A18T-07 INPP5A-LRRC27 28 126 chr10:132607956:+ chr10:132361457:+ INFRAME NA TCGA-D3-A2J6-06A-11R-A18T-07 ZFAND6-KCNRG 12 69 chr15:80098578:+ chr13:50020214:+ . NA TCGA-D3-A2J6-06A-11R-A18T-07 ZFAND6-TRIM13 12 69 chr15:80098578:+ chr13:50020214:+ . NA TCGA-D3-A2J6-06A-11R-A18T-07 NUP37-ACSS3 2 24 chr12:102099106:- chr12:81109560:+ INFRAME NA TCGA-D3-A2J6-06A-11R-A18T-07 MYL6B-RAB5B 3 18 chr12:56155592:+ chr12:55979372:+ . NA TCGA-D3-A2J6-06A-11R-A18T-07 IREB2-C6orf52 1 23 chr15:78494264:+ chr6:10687164:- INFRAME NA TCGA-D3-A2J6-06A-11R-A18T-07 CDK18-CNTN2 1 14 chr1:205504796:+ chr1:205057921:+ . NA TCGA-D3-A2J6-06A-11R-A18T-07 ZFAND6-DLEU1 1 3 chr15:80059809:+ chr13:50083142:+ . NA TCGA-D3-A2J8-06A-11R-A18T-07 KPNA4-WWTR1 40 323 chr3:160515452:- chr3:149657309:- . NA TCGA-D3-A2J8-06A-11R-A18T-07 BBX-KPNA4 24 57 chr3:107748039:+ chr3:160509871:- INFRAME NA TCGA-D3-A2J8-06A-11R-A18T-07 ZIC1-BBX 5 10 chr3:147393942:+ chr3:107772628:+ FRAMESHIFT NA TCGA-D3-A2J9-06A-11R-A18T-07 FARS2-LYRM4 1 21 chr6:5613320:+ chr6:5216738:- INFRAME NA TCGA-D3-A2J9-06A-11R-A18T-07 CPSF6-SEC61B 2 1 chr12:69262562:+ chr9:99230337:+ INFRAME NA TCGA-D3-A2JA-06A-11R-A18T-07 SPTBN1-STX8 15 49 chr2:54526566:+ chr17:9378653:- INFRAME NA TCGA-D3-A2JA-06A-11R-A18T-07 C3orf67-CRTAP 2 8 chr3:59039557:- chr3:33142395:+ FRAMESHIFT NA TCGA-D3-A2JA-06A-11R-A18T-07 RPS6KA5-BMP4 1 5 chr14:91060332:- chr14:53953400:- . NA TCGA-D3-A2JB-06A-11R-A18T-07 CTNND1-PACS1 18 112 chr11:57762046:+ chr11:66193486:+ . NA TCGA-D3-A2JB-06A-11R-A18T-07 GDPD5-ACER3 4 30 chr11:75456757:- chr11:77011330:+ . NA TCGA-D3-A2JB-06A-11R-A18T-07 SMYD2-LPGAT1 5 9 chr1:214324708:+ chr1:211751067:- INFRAME NA TCGA-D3-A2JB-06A-11R-A18T-07 TRIM48-ADAMTS16 4 11 chr11:55262311:+ chr5:5262657:+ FRAMESHIFT NA TCGA-D3-A2JB-06A-11R-A18T-07 RSF1-OR5AP2 3 10 chr11:77698487:- chr11:56642447:- . NA TCGA-D3-A2JC-06A-11R-A18T-07 MYO10-C5orf38 200 952 chr5:16877609:- chr5:2755029:+ INFRAME NA TCGA-D3-A2JC-06A-11R-A18T-07 POLR3H-CTNND2 21 88 chr22:41540699:- chr5:11732272:- INFRAME NA TCGA-D3-A2JC-06A-11R-A18T-07 MIR4458HG-GRAP2 22 52 chr5:8457766:+ chr22:39947093:+ . NA TCGA-D3-A2JC-06A-11R-A18T-07 TRIP12-MAFF 6 13 chr2:229921880:- chr22:38213823:+ . NA TCGA-D3-A2JC-06A-11R-A18T-07 TRMU-ST13 2 26 chr22:46352330:+ chr22:40835887:- INFRAME NA TCGA-D3-A2JC-06A-11R-A18T-07 POLR1A-ACO2 1 23 chr2:86032272:- chr22:41499726:+ INFRAME NA TCGA-D3-A2JC-06A-11R-A18T-07 SNU13-ATXN10 3 7 chr22:41680244:- chr22:45702689:+ FRAMESHIFT NA TCGA-D3-A2JC-06A-11R-A18T-07 SHISA9-CREB5 2 6 chr16:12916815:+ chr7:28488175:+ FRAMESHIFT NA TCGA-D3-A2JD-06A-11R-A18T-07 PDPK1-HN1L 1 1 chr16:2577500:+ chr16:1685439:+ INFRAME NA TCGA-D3-A2JE-06A-11R-A37K-07 ZSCAN5A-DKKL1 3 271 chr19:56313283:- chr19:49374717:+ . NA TCGA-D3-A2JE-06A-11R-A37K-07 ZNF544-GRIN2D 7 24 chr19:58230462:+ chr19:48404734:+ . NA TCGA-D3-A2JE-06A-11R-A37K-07 SPIDR-UBE2V2 2 20 chr8:47713641:+ chr8:48043033:+ INFRAME NA TCGA-D3-A2JE-06A-11R-A37K-07 GTPBP3-RBM42 2 4 chr19:17339599:+ chr19:35631140:+ FRAMESHIFT NA TCGA-D3-A2JG-06A-11R-A18T-07 GXYLT2-PRICKLE2 49 223 chr3:72908559:+ chr3:64163129:- INFRAME NA TCGA-D3-A2JG-06A-11R-A18T-07 SS18L1-JAM2 36 155 chr20:62165514:+ chr21:25683883:+ INFRAME NA TCGA-D3-A2JG-06A-11R-A18T-07 CADPS-FAM19A1 7 37 chr3:62465367:- chr3:68417280:+ FRAMESHIFT NA TCGA-D3-A2JG-06A-11R-A18T-07 R3HDM4-NLRP1 3 22 chr19:900829:- chr17:5501872:- INFRAME NA TCGA-D3-A2JG-06A-11R-A18T-07 MITF-PSMD6 4 5 chr3:69739701:+ chr3:64022523:- FRAMESHIFT NA TCGA-D3-A2JG-06A-11R-A18T-07 CDC25A-RBM6 1 13 chr3:48182929:- chr3:50048245:+ INFRAME NA TCGA-D3-A2JH-06A-11R-A18T-07 ERBIN-TMEM232 8 110 chr5:66054951:+ chr5:110424916:- INFRAME NA TCGA-D3-A2JN-06A-11R-A18S-07 SAFB2-AP2A1 2 2 chr19:5598793:- chr19:49791935:+ FRAMESHIFT NA TCGA-D3-A2JN-06A-11R-A18S-07 AP2A1-VRK3 1 3 chr19:49792064:+ chr19:49979242:- FRAMESHIFT NA TCGA-D3-A2JO-06A-11R-A18S-07 CELSR1-KIAA1644 1 8 chr22:46533627:- chr22:44300977:- . NA TCGA-D3-A2JO-06A-11R-A18S-07 PPFIA1-ZNF717 1 1 chr11:70272436:+ chr3:75741865:- . NA TCGA-D3-A2JP-06A-11R-A18S-07 GRIK2-GPC1 5 5 chr6:101399392:+ chr2:240459030:+ INFRAME NA TCGA-D3-A3BZ-06A-12R-A18S-07 RBM19-PTPRQ 25 109 chr12:113914969:- chr12:80588129:+ FRAMESHIFT NA TCGA-D3-A3BZ-06A-12R-A18S-07 MPRIP-TRAT1 4 29 chr17:17078076:+ chr3:108830670:+ FRAMESHIFT NA TCGA-D3-A3BZ-06A-12R-A18S-07 SGK3-NCK1 5 25 chr8:66843547:+ chr3:136948259:+ INFRAME NA TCGA-D3-A3BZ-06A-12R-A18S-07 IFT81-GLIPR1L2 3 17 chr12:110180571:+ chr12:75410434:+ INFRAME NA TCGA-D3-A3BZ-06A-12R-A18S-07 NMNAT3-SELENOT 2 11 chr3:139677705:- chr3:150622385:+ . NA TCGA-D3-A3BZ-06A-12R-A18S-07 TAOK1-RAB8B 2 2 chr17:29510992:+ chr15:63244756:+ FRAMESHIFT NA TCGA-D3-A3C1-06A-12R-A18S-07 CD63-C12orf10 551 2084 chr12:55726700:- chr12:53300150:+ INFRAME NA TCGA-D3-A3C1-06A-12R-A18S-07 HIPK2-ARPC1A 55 129 chr7:139777605:- chr7:99338181:+ INFRAME NA TCGA-D3-A3C1-06A-12R-A18S-07 KMT2C-LHFPL3 8 120 chr7:152435626:- chr7:104736675:+ FRAMESHIFT Likely Oncogenic NA TCGA-D3-A3C1-06A-12R-A18S-07 PCBP2-HMGA2 17 38 chr12:53452376:+ chr12:65828001:+ . NA TCGA-D3-A3C1-06A-12R-A18S-07 CNOT4-AKR1B10 6 74 chr7:135509889:- chr7:134530643:+ . NA TCGA-D3-A3C1-06A-12R-A18S-07 GTF2H3-NCOR2 3 19 chr12:123645561:+ chr12:124378384:- FRAMESHIFT NA TCGA-D3-A3C1-06A-12R-A18S-07 KDM7A-ATP5J2 2 23 chr7:140127442:- chr7:99460193:- FRAMESHIFT NA TCGA-D3-A3C1-06A-12R-A18S-07 RPF1-PRKACB 2 10 chr1:84479509:+ chr1:84235180:+ INFRAME NA TCGA-D3-A3C1-06A-12R-A18S-07 RAB40C-IRF3 1 1 chr16:590433:+ chr19:49663258:- INFRAME NA TCGA-D3-A3C3-06A-12R-A18S-07 KMT2C-IRF5 3 13 chr7:152282983:- chr7:128942071:+ . Likely Oncogenic NA TCGA-D3-A3C3-06A-12R-A18S-07 NRF1-RHEB 1 2 chr7:129717376:+ chr7:151484804:- FRAMESHIFT NA TCGA-D3-A3C7-06A-11R-A18U-07 DNMT3A-DTNB 18 29 chr2:25341826:- chr2:25379323:- . Likely Oncogenic NA TCGA-D3-A3CC-06A-11R-A18S-07 ING4-A2ML1 251 45 chr12:6663065:- chr12:8874425:+ FRAMESHIFT NA TCGA-D3-A3CC-06A-11R-A18S-07 CENPBD1P1-PEPD 38 192 chr19:58575588:+ chr19:33413643:- . NA TCGA-D3-A3CC-06A-11R-A18S-07 USP9X-RBBP7 29 96 chrX:41086109:+ chrX:16863100:- . NA TCGA-D3-A3CC-06A-11R-A18S-07 KIAA1551-A2ML1 26 60 chr12:31960871:+ chr12:8851784:+ . NA TCGA-D3-A3CC-06A-11R-A18S-07 AEBP2-PRLR 13 41 chr12:19493986:+ chr5:35118122:- . NA TCGA-D3-A3CC-06A-11R-A18S-07 CAPRIN2-R3HDM2 10 39 chr12:30741020:- chr12:57305663:- INFRAME NA TCGA-D3-A3CC-06A-11R-A18S-07 LONP1-CARD8 8 42 chr19:5719704:- chr19:48215384:- INFRAME NA TCGA-D3-A3CC-06A-11R-A18S-07 PHC1-FGF10 11 19 chr12:8917791:+ chr5:44310530:- FRAMESHIFT NA TCGA-D3-A3CC-06A-11R-A18S-07 PEPD-GRAMD1A 2 26 chr19:33462995:- chr19:35009119:+ INFRAME NA TCGA-D3-A3CC-06A-11R-A18S-07 MYH14-SIGLEC16 3 21 chr19:50217771:+ chr19:49973043:+ . NA TCGA-D3-A3CC-06A-11R-A18S-07 GIPR-LGALS7 4 14 chr19:45678226:+ chr19:38772030:- FRAMESHIFT NA TCGA-D3-A3CC-06A-11R-A18S-07 ZNF283-DPRX 1 20 chr19:43837179:+ chr19:53634531:+ INFRAME NA TCGA-D3-A3CC-06A-11R-A18S-07 MYO9B-DOCK6 2 13 chr19:17102557:+ chr19:11253726:- FRAMESHIFT NA TCGA-D3-A3CC-06A-11R-A18S-07 LIG1-NTF4 2 9 chr19:48161372:- chr19:49063862:- . NA TCGA-D3-A3CC-06A-11R-A18S-07 SLC27A1-KMT5C 1 13 chr19:17470707:+ chr19:55346213:+ FRAMESHIFT NA TCGA-D3-A3CC-06A-11R-A18S-07 RGS17-LAMA2 2 6 chr6:153131124:- chr6:129049918:+ . NA TCGA-D3-A3CC-06A-11R-A18S-07 TEAD4-CPM 1 8 chr12:2960196:+ chr12:68932840:- . NA TCGA-D3-A3CC-06A-11R-A18S-07 UACA-PHF20 1 5 chr15:70695017:- chr20:35847350:+ FRAMESHIFT NA TCGA-D3-A3CC-06A-11R-A18S-07 MYO10-FAM134B 1 4 chr5:16935788:- chr5:16572102:- FRAMESHIFT NA TCGA-D3-A3CE-06A-11R-A18S-07 SLC26A11-RPTOR 5 7 chr17:80220496:+ chr17:80707841:+ . NA TCGA-D3-A3CF-06A-11R-A18T-07 LBH-FLT4 56 262 chr2:30234507:+ chr5:180631778:- FRAMESHIFT NA TCGA-D3-A3CF-06A-11R-A18T-07 CLIP4-TMEM18 24 164 chr2:29121521:+ chr2:675630:- FRAMESHIFT NA TCGA-D3-A3CF-06A-11R-A18T-07 ITSN2-MYO10 11 44 chr2:24360304:- chr5:16818167:- . NA TCGA-D3-A3CF-06A-11R-A18T-07 SNTG2-RBKS 12 33 chr2:1316375:+ chr2:27832777:- FRAMESHIFT NA TCGA-D3-A3CF-06A-11R-A18T-07 FBXL7-FOSL2 5 27 chr5:15500713:+ chr2:28404107:+ FRAMESHIFT NA TCGA-D3-A3CF-06A-11R-A18T-07 FAM228B-SNTG2 4 28 chr2:24135187:+ chr2:1308494:+ INFRAME NA TCGA-D3-A3CF-06A-11R-A18T-07 NCOA1-GUSBP1 6 20 chr2:24683128:+ chr5:21585530:+ . NA TCGA-D3-A3CF-06A-11R-A18T-07 ITSN2-KIDINS220 4 24 chr2:24275713:- chr2:8786357:- INFRAME NA TCGA-D3-A3CF-06A-11R-A18T-07 PLOD1-FBXL7 3 16 chr1:11965593:+ chr5:15615983:+ FRAMESHIFT NA TCGA-D3-A3CF-06A-11R-A18T-07 RBKS-FAM228B 3 4 chr2:27827567:- chr2:24164198:+ INFRAME NA TCGA-D3-A3ML-06A-11R-A21D-07 AKT3-CDC14A 10 24 chr1:243843125:- chr1:100390732:+ FRAMESHIFT Likely Oncogenic NA TCGA-D3-A3MO-06A-11R-A21D-07 MINOS1-DENND2C 76 224 chr1:19597109:+ chr1:114587952:- INFRAME NA TCGA-D3-A3MO-06A-11R-A21D-07 DHDDS-FAAHP1 41 273 chr1:26433008:+ chr1:46482210:+ . NA TCGA-D3-A3MO-06A-11R-A21D-07 NFAT5-DENND2C 13 70 chr16:69566374:+ chr1:114587952:- INFRAME NA TCGA-D3-A3MO-06A-11R-A21D-07 LRP12-RALGPS1 4 28 chr8:104588819:- chr9:126962225:+ . NA TCGA-D3-A3MO-06A-11R-A21D-07 C9orf3-VCAN 1 16 chr9:94979427:+ chr5:83572416:+ INFRAME NA TCGA-D3-A3MO-06A-11R-A21D-07 GPAT4-LY6H 2 7 chr8:41584917:+ chr8:143159709:- . NA TCGA-D3-A3MO-06A-11R-A21D-07 TRAPPC9-PLEKHA2 1 2 chr8:140023937:- chr8:38935994:+ FRAMESHIFT NA TCGA-D3-A3MR-06A-11R-A21D-07 ALG14-HACD1 1 24 chr1:95041493:- chr10:17599411:- . NA TCGA-D3-A3MV-06A-11R-A21D-07 RCC1-RPL22 1 1 chr1:28508160:+ chr1:6197756:- . NA TCGA-D3-A51E-06A-11R-A266-07 NFASC-CCNDBP1 8 42 chr1:204828782:+ chr15:43189199:+ . NA TCGA-D3-A51E-06A-11R-A266-07 GALNT2-RGS7 2 9 chr1:230067406:+ chr1:240983129:- FRAMESHIFT NA TCGA-D3-A51E-06A-11R-A266-07 TNFRSF1B-FBXO6 2 1 chr1:12167169:+ chr1:11673277:+ FRAMESHIFT NA TCGA-D3-A51E-06A-11R-A266-07 NUMA1-CNTNAP3 1 1 chr11:72035902:- chr9:39074011:- FRAMESHIFT NA TCGA-D3-A51G-06A-11R-A266-07 USP13-KCNMB2 310 1059 chr3:179742350:+ chr3:178842653:+ FRAMESHIFT NA TCGA-D3-A51G-06A-11R-A266-07 SMYD3-KIF28P 1 16 chr1:246507054:- chr1:246781057:- . NA TCGA-D3-A51G-06A-11R-A266-07 MBOAT1-F13A1 2 4 chr6:20112876:- chr6:6224860:- INFRAME NA TCGA-D3-A51H-06A-12R-A266-07 TMEM117-KCNC2 50 152 chr12:43844928:+ chr12:75051317:- FRAMESHIFT NA TCGA-D3-A51H-06A-12R-A266-07 CLIP1-RSRC2 5 15 chr12:122422521:- chr12:122508447:- . NA TCGA-D3-A51H-06A-12R-A266-07 CSRP2-NAV3 1 4 chr12:76878938:- chr12:77940319:+ . NA TCGA-D3-A51N-06A-11R-A266-07 POLK-HSD17B4 36 252 chr5:75552591:+ chr5:119456315:+ FRAMESHIFT NA TCGA-D3-A51N-06A-11R-A266-07 FBXW11-TTC33 30 110 chr5:172006458:- chr5:40513069:- FRAMESHIFT NA TCGA-D3-A51N-06A-11R-A266-07 G3BP1-PDE4D 20 83 chr5:151791062:+ chr5:59988717:- INFRAME NA TCGA-D3-A51N-06A-11R-A266-07 MCCC2-NNT 12 42 chr5:71604468:+ chr5:43675511:+ INFRAME NA TCGA-D3-A51N-06A-11R-A266-07 STK32A-SPINK5 5 19 chr5:147239686:+ chr5:148070323:+ FRAMESHIFT NA TCGA-D3-A51N-06A-11R-A266-07 SRFBP1-MGC32805 4 14 chr5:121962068:+ chr5:122454509:- . NA TCGA-D3-A51N-06A-11R-A266-07 SREK1IP1-CCDC112 3 16 chr5:64764975:- chr5:115277054:- . NA TCGA-D3-A51N-06A-11R-A266-07 SPINK5-DNAJC21 2 19 chr5:148125850:+ chr5:34945761:+ INFRAME NA TCGA-D3-A51N-06A-11R-A266-07 FAM114A2-FBN2 2 14 chr5:154033791:- chr5:128273968:- INFRAME NA TCGA-D3-A51N-06A-11R-A266-07 TMEM161B-CTNND2 1 18 chr5:88268721:- chr5:11117567:- FRAMESHIFT NA TCGA-D3-A51N-06A-11R-A266-07 AP3B1-IPO11 2 7 chr5:78294452:- chr5:62467131:+ FRAMESHIFT NA TCGA-D3-A51N-06A-11R-A266-07 ARL15-STK32A 1 4 chr5:54171784:- chr5:147323898:+ FRAMESHIFT NA TCGA-D3-A5GL-06A-11R-A27Q-07 FMN1-AVEN 17 65 chr15:32798804:- chr15:33875995:- FRAMESHIFT NA TCGA-D3-A5GL-06A-11R-A27Q-07 ANKS1B-ERP29 2 18 chr12:98773042:- chr12:112019756:+ INFRAME NA TCGA-D3-A5GN-06A-11R-A27Q-07 USP18-YWHAH 6 9 chr22:18150223:+ chr22:31956140:+ . NA TCGA-D3-A5GR-06A-11R-A27Q-07 TDRD3-CUL4A 354 973 chr13:60397405:+ chr13:113253082:+ FRAMESHIFT NA TCGA-D3-A5GR-06A-11R-A27Q-07 KATNAL1-CUL4A 97 447 chr13:30283616:- chr13:113253082:+ INFRAME NA TCGA-D3-A5GR-06A-11R-A27Q-07 KATNAL1-UBE2L5P 45 231 chr13:30283616:- chr13:30426725:+ . NA TCGA-D3-A5GS-06A-11R-A27Q-07 WARS2-NTNG1 5 33 chr1:119076350:- chr1:107480611:+ FRAMESHIFT NA TCGA-D3-A5GU-06A-11R-A27Q-07 NOTCH2-REG4 21 71 chr1:120069334:- chr1:119803165:- INFRAME NA TCGA-D3-A5GU-06A-11R-A27Q-07 SUZ12-VANGL1 1 7 chr17:31996877:+ chr1:115659641:+ INFRAME NA TCGA-D3-A8GB-06A-11R-A37K-07 XRRA1-EMSY 25 123 chr11:74948928:- chr11:76463821:+ . NA TCGA-D3-A8GB-06A-11R-A37K-07 LSM4-GRK2 29 43 chr19:18323018:- chr11:67279200:+ FRAMESHIFT NA TCGA-D3-A8GB-06A-11R-A37K-07 CTSF-RANBP3 19 48 chr11:66568274:- chr19:5921321:- INFRAME NA TCGA-D3-A8GC-06A-11R-A37K-07 FAM129B-SNRNP25 6 35 chr9:127516857:- chr16:55777:+ INFRAME NA TCGA-D3-A8GC-06A-11R-A37K-07 CMSS1-AXIN1 2 2 chr3:99818043:+ chr16:298251:- FRAMESHIFT Likely Oncogenic NA TCGA-D3-A8GI-06A-11R-A37K-07 AXIN1-NPRL3 2 9 chr16:346148:- chr16:119255:- INFRAME Likely Oncogenic NA TCGA-D3-A8GJ-06A-11R-A37K-07 MTMR3-EMID1 13 11 chr22:29883359:+ chr22:29214926:+ . NA TCGA-D3-A8GJ-06A-11R-A37K-07 TBX15-AP4B1 1 5 chr1:118987591:- chr1:113904793:- . NA TCGA-D3-A8GN-06A-11R-A37K-07 DCAKD-SMAP1 5 31 chr17:45060888:- chr6:70754980:+ . NA TCGA-D3-A8GN-06A-11R-A37K-07 LNPEP-FLT4 8 10 chr5:96936174:+ chr5:180621904:- INFRAME NA TCGA-D3-A8GO-06A-11R-A37K-07 FAM13A-ABCG2 9 16 chr4:88822976:- chr4:88132635:- INFRAME NA TCGA-D3-A8GR-06A-11R-A37K-07 MAPK1-PRAMENP 1 8 chr22:21799012:- chr22:22026327:- . NA TCGA-D3-A8GR-06A-11R-A37K-07 TACC3-TMEM129 1 5 chr4:1737702:+ chr4:1718626:- FRAMESHIFT NA TCGA-D9-A149-06A-11R-A18S-07 YWHAG-OPA3 24 66 chr7:76358722:- chr19:45553911:- FRAMESHIFT NA TCGA-D9-A1JW-06A-11R-A18S-07 GRB2-VMP1 9 54 chr17:75393551:- chr17:59764971:+ INFRAME NA TCGA-D9-A1JX-06A-11R-A18S-07 FMN1-TRPM1 91 561 chr15:33008014:- chr15:31061514:- INFRAME NA TCGA-D9-A1JX-06A-11R-A18S-07 ZNF280B-BPIFC 8 39 chr22:22507810:- chr22:32447340:- . NA TCGA-D9-A1JX-06A-11R-A18S-07 MKL1-FAM19A5 10 0 chr22:40636478:- chr22:48646597:+ . NA TCGA-D9-A1JX-06A-11R-A18S-07 PEX26-RTCB 2 27 chr22:18085258:+ chr22:32388099:- FRAMESHIFT NA TCGA-D9-A1JX-06A-11R-A18S-07 THOC5-ISX 5 5 chr22:29528078:- chr22:35066752:+ . NA TCGA-D9-A1JX-06A-11R-A18S-07 PAK2-SENP5 1 15 chr3:196782833:+ chr3:196899666:+ INFRAME NA TCGA-D9-A1X3-06A-11R-A18S-07 CNOT2-YEATS4 6 15 chr12:70342307:+ chr12:69362788:+ INFRAME NA TCGA-D9-A1X3-06A-11R-A18S-07 CAND1-DYRK2 5 12 chr12:67299095:+ chr12:67657106:+ FRAMESHIFT NA TCGA-D9-A1X3-06A-11R-A18S-07 CLNK-WDR70 5 10 chr4:10540494:- chr5:37437922:+ FRAMESHIFT NA TCGA-D9-A1X3-06A-11R-A18S-07 TRIO-CLNK 5 3 chr5:14401064:+ chr4:10584955:- FRAMESHIFT NA TCGA-D9-A1X3-06A-11R-A18S-07 VAV2-CLNK 1 3 chr9:133992075:- chr4:10598049:- FRAMESHIFT NA TCGA-D9-A1X3-06A-11R-A18S-07 DNAJA4-CLIC4 1 2 chr15:78264393:+ chr1:24797742:+ FRAMESHIFT NA TCGA-D9-A3Z1-06A-11R-A239-07 ARAP3-DIAPH1 2 2 chr5:141679545:- chr5:141534433:- FRAMESHIFT NA TCGA-D9-A3Z3-06A-11R-A239-07 NADSYN1-PPP6R3 8 25 chr11:71478469:+ chr11:68554145:+ INFRAME NA TCGA-D9-A3Z3-06A-11R-A239-07 RNF121-MRPL21 5 20 chr11:71960891:+ chr11:68900605:- FRAMESHIFT NA TCGA-D9-A3Z3-06A-11R-A239-07 CHKA-NADSYN1 1 28 chr11:68068879:- chr11:71480755:+ INFRAME NA TCGA-D9-A3Z3-06A-11R-A239-07 PTGDS-NOC4L 1 1 chr9:136977692:+ chr12:132150981:+ FRAMESHIFT NA TCGA-D9-A4Z6-06A-12R-A266-07 FAM126A-TRA2A 20 67 chr7:22983944:- chr7:23507535:- INFRAME NA TCGA-D9-A4Z6-06A-12R-A266-07 MPRIP-RAF1 6 49 chr17:17180088:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-D9-A6E9-06A-12R-A311-07 ZCRB1-LIMA1 18 64 chr12:42324019:- chr12:50222485:- INFRAME NA TCGA-D9-A6E9-06A-12R-A311-07 NCBP3-ATP2A3 4 5 chr17:3814322:- chr17:3953710:- INFRAME NA TCGA-D9-A6E9-06A-12R-A311-07 SAP30BP-PPY 1 3 chr17:75671863:+ chr17:43941654:- INFRAME NA TCGA-D9-A6EA-06A-11R-A311-07 ZNF101-NDUFA13 2 19 chr19:19668966:+ chr19:19526182:+ FRAMESHIFT NA TCGA-D9-A6EA-06A-11R-A311-07 PLXNA1-TNK2 1 3 chr3:126991566:+ chr3:195888606:- INFRAME NA TCGA-D9-A6EA-06A-11R-A311-07 OSBPL5-CTBP1 1 2 chr11:3165216:- chr4:1241519:- . NA TCGA-D9-A6EC-06A-11R-A311-07 ROBO1-THAP4 53 212 chr3:78714392:- chr2:241606477:- . NA TCGA-DA-A1HW-06A-11R-A18U-07 SEC11A-VPS33B 126 632 chr15:84716025:- chr15:91003131:- FRAMESHIFT NA TCGA-DA-A1HW-06A-11R-A18U-07 SPTY2D1-SERGEF 20 117 chr11:18634198:- chr11:17788413:- FRAMESHIFT NA TCGA-DA-A1HW-06A-11R-A18U-07 PDE8A-SLCO3A1 13 24 chr15:84982348:+ chr15:92094881:+ FRAMESHIFT NA TCGA-DA-A1HW-06A-11R-A18U-07 SERGEF-KCNC1 6 12 chr11:17959470:- chr11:17771665:+ INFRAME NA TCGA-DA-A1HW-06A-11R-A18U-07 NAALADL2-VPS13C 3 17 chr3:174441032:+ chr15:62013992:- . NA TCGA-DA-A1HW-06A-11R-A18U-07 FBXL19-ZNF720 4 10 chr16:30930584:+ chr16:31792630:+ FRAMESHIFT NA TCGA-DA-A1HW-06A-11R-A18U-07 BDH2-MANBA 4 4 chr4:103099783:- chr4:102674070:- . NA TCGA-DA-A1HW-06A-11R-A18U-07 TNRC18-HDAC9 2 11 chr7:5361897:- chr7:18325512:+ . NA TCGA-DA-A1HW-06A-11R-A18U-07 ABCC4-PTPN4 2 9 chr13:95301241:- chr2:119926598:+ INFRAME NA TCGA-DA-A1HW-06A-11R-A18U-07 PSMA1-SERGEF 3 5 chr11:14610966:- chr11:17959636:- FRAMESHIFT NA TCGA-DA-A1HW-06A-11R-A18U-07 HDAC9-LINGO2 1 5 chr7:18585522:+ chr9:28476025:- . NA TCGA-DA-A1HW-06A-11R-A18U-07 CDC42-ALPL 1 4 chr1:22052742:+ chr1:21553978:+ . NA TCGA-DA-A1HW-06A-11R-A18U-07 MAP4K4-MBNL2 1 4 chr2:101698538:+ chr13:97391322:+ INFRAME NA TCGA-DA-A1HW-06A-11R-A18U-07 SUN1-SI 1 4 chr7:843520:+ chr3:165076012:- FRAMESHIFT NA TCGA-DA-A1HY-06A-11R-A18T-07 OLMALINC-CALCOCO2 8 33 chr10:100374012:+ chr17:48848064:+ . NA TCGA-DA-A1I0-06A-11R-A20F-07 ESYT2-NCAPG2 13 112 chr7:158759486:- chr7:158658408:- INFRAME NA TCGA-DA-A1I0-06A-11R-A20F-07 ZNF136-XAB2 18 46 chr19:12163206:+ chr19:7628298:- INFRAME NA TCGA-DA-A1I0-06A-11R-A20F-07 ZNF20-TINCR 11 40 chr19:12140180:- chr19:5562211:- FRAMESHIFT NA TCGA-DA-A1I0-06A-11R-A20F-07 ZNF57-NANOS3 11 34 chr19:2901048:+ chr19:13880442:+ FRAMESHIFT NA TCGA-DA-A1I0-06A-11R-A20F-07 FZR1-MAN2B1 4 56 chr19:3536976:+ chr19:12657558:- . NA TCGA-DA-A1I0-06A-11R-A20F-07 DST-MLIP 9 18 chr6:56506443:- chr6:54121447:+ INFRAME NA TCGA-DA-A1I0-06A-11R-A20F-07 SLC39A3-DDX39A 1 32 chr19:2737048:- chr19:14411598:- INFRAME NA TCGA-DA-A1I0-06A-11R-A20F-07 AKAP8L-GAS5 1 1 chr19:15397150:- chr1:173864506:- . NA TCGA-DA-A1I0-06A-11R-A20F-07 PLEKHG1-DTYMK 1 1 chr6:150819774:+ chr2:241685877:- INFRAME NA TCGA-DA-A1I4-06A-11R-A18U-07 RAB12-TWSG1 1 8 chr18:8609953:+ chr18:9337193:+ . NA TCGA-DA-A1I7-06A-22R-A18S-07 NEURL4-MSI2 22 20 chr17:7317788:- chr17:57432586:+ FRAMESHIFT NA TCGA-DA-A1I7-06A-22R-A18S-07 ZMYM4-SMYD3 5 24 chr1:35361789:+ chr1:245929937:- INFRAME NA TCGA-DA-A1I7-06A-22R-A18S-07 HAPLN1-EDIL3 5 10 chr5:83720789:- chr5:83943568:- . NA TCGA-DA-A1I7-06A-22R-A18S-07 SMYD3-ZMYM4 2 16 chr1:246327201:- chr1:35370029:+ INFRAME NA TCGA-DA-A1I7-06A-22R-A18S-07 MYO10-MARCH11 2 13 chr5:16935788:- chr5:16177881:- INFRAME NA TCGA-DA-A1I7-06A-22R-A18S-07 CERK-KIAA1644 3 5 chr22:46720086:- chr22:44249685:- FRAMESHIFT NA TCGA-DA-A1I8-06A-11R-A18T-07 PDZD8-ENO4 21 62 chr10:117318872:- chr10:116855623:+ INFRAME NA TCGA-DA-A1I8-06A-11R-A18T-07 FAM104A-SLC39A11 2 24 chr17:73232086:- chr17:73088775:- . NA TCGA-DA-A1I8-06A-11R-A18T-07 DUSP22-HDHD5 3 13 chr6:311962:+ chr22:17149745:- INFRAME NA TCGA-DA-A1IA-06A-11R-A18S-07 LRRFIP1-DBF4B 9 25 chr2:237627740:+ chr17:44722880:+ FRAMESHIFT NA TCGA-DA-A1IA-06A-11R-A18S-07 PFDN2-RXRG 1 3 chr1:161117952:- chr1:165428966:- FRAMESHIFT NA TCGA-DA-A1IA-06A-11R-A18S-07 LMBR1L-SSU72 1 1 chr12:49101250:- chr1:1545002:- INFRAME NA TCGA-DA-A3F3-06A-11R-A20F-07 ZDHHC21-PHGDH 26 115 chr9:14639896:- chr1:119734634:+ INFRAME NA TCGA-DA-A3F3-06A-11R-A20F-07 RECK-ACER3 10 71 chr9:36052323:+ chr11:76976289:+ INFRAME NA TCGA-DA-A3F3-06A-11R-A20F-07 COL4A3BP-ELOVL7 19 28 chr5:75505982:- chr5:60787431:- . NA TCGA-DA-A3F3-06A-11R-A20F-07 CLPB-KIAA2026 14 32 chr11:72430312:- chr9:5881675:- . NA TCGA-DA-A3F3-06A-11R-A20F-07 NDUFS4-HMGCR 5 26 chr5:53658624:+ chr5:75342583:+ . NA TCGA-DA-A3F3-06A-11R-A20F-07 PPFIA1-TSKU 2 12 chr11:70356254:+ chr11:76795609:+ . NA TCGA-DA-A3F5-06A-11R-A20F-07 ISL2-PEAK1 11 83 chr15:76336941:+ chr15:77182040:- . NA TCGA-DA-A3F5-06A-11R-A20F-07 PEAK1-PSTPIP1 12 59 chr15:77178790:- chr15:77025284:+ INFRAME NA TCGA-DA-A3F5-06A-11R-A20F-07 RUNX1-IFNAR1 2 33 chr21:34834410:- chr21:33352758:+ FRAMESHIFT Likely Oncogenic NA TCGA-DA-A3F5-06A-11R-A20F-07 NPTN-HMG20A 4 16 chr15:73633125:- chr15:77458404:+ . NA TCGA-DA-A3F5-06A-11R-A20F-07 NRCAM-SEM1 3 10 chr7:108456243:- chr7:96694891:- . NA TCGA-DA-A3F5-06A-11R-A20F-07 ETFA-IMP3 2 7 chr15:76274412:- chr15:75640268:- . NA TCGA-DA-A95V-06A-11R-A37K-07 FAM168A-MYEOV 7 54 chr11:73597923:- chr11:69341510:+ . NA TCGA-DA-A95V-06A-11R-A37K-07 NUMA1-C2CD3 6 54 chr11:72069842:- chr11:74013525:- . NA TCGA-DA-A95V-06A-11R-A37K-07 C7orf57-SUGCT 1 6 chr7:48049977:+ chr7:40496284:+ INFRAME NA TCGA-DA-A95V-06A-11R-A37K-07 ZNF682-CRLF1 1 3 chr19:20039343:- chr19:18599846:- FRAMESHIFT NA TCGA-DA-A95W-06A-11R-A37K-07 FMN1-SNAP23 1 46 chr15:32964107:- chr15:42511833:+ . NA TCGA-DA-A95Y-06A-11R-A37K-07 EIF2AK3-NBAS 16 63 chr2:88626967:- chr2:15427794:- INFRAME NA TCGA-DA-A95Y-06A-11R-A37K-07 RNF144A-MSH2 8 21 chr2:6941147:+ chr2:47408401:+ . Likely Oncogenic NA TCGA-DA-A95Y-06A-11R-A37K-07 MRPL21-GDPD4 6 3 chr11:68892890:- chr11:77287420:- . NA TCGA-DA-A95Y-06A-11R-A37K-07 ARID2-C12orf56 2 13 chr12:45731314:+ chr12:64353056:- FRAMESHIFT Likely Oncogenic NA TCGA-DA-A95Y-06A-11R-A37K-07 RNASEH1-DYSF 2 12 chr2:3552144:- chr2:71643965:+ FRAMESHIFT NA TCGA-EB-A44Q-06A-11R-A266-07 TRIO-ADAMTS12 15 110 chr5:14381252:+ chr5:33881480:- FRAMESHIFT NA TCGA-EB-A44Q-06A-11R-A266-07 CNOT2-FBXO4 34 27 chr12:70243480:+ chr5:41929697:+ . NA TCGA-EB-A44Q-06A-11R-A266-07 R3HDM2-PRDM9 31 39 chr12:57430720:- chr5:23493471:+ . NA TCGA-EB-A44Q-06A-11R-A266-07 MYO10-FAM186A 4 43 chr5:16818009:- chr12:50356248:- FRAMESHIFT NA TCGA-EB-A44Q-06A-11R-A266-07 KDM2B-SNRNP35 5 24 chr12:121532806:- chr12:123458021:+ . NA TCGA-EB-A44Q-06A-11R-A266-07 MAPK14-SIN3A 4 14 chr6:36028273:+ chr15:75430408:- . NA TCGA-EB-A44Q-06A-11R-A266-07 ADAMTS12-RAI14 4 11 chr5:33881119:- chr5:34757468:+ INFRAME NA TCGA-EB-A44Q-06A-11R-A266-07 NOS1-UBC 3 14 chr12:117285241:- chr12:124913774:- . NA TCGA-EB-A44Q-06A-11R-A266-07 SLC16A7-GOLPH3 4 9 chr12:59596236:+ chr5:32135686:- . NA TCGA-EB-A44Q-06A-11R-A266-07 SDHAF4-SH3BGRL2 3 9 chr6:70579566:+ chr6:79673614:+ FRAMESHIFT NA TCGA-EB-A44Q-06A-11R-A266-07 GABPB1-C15orf52 1 15 chr15:50354985:- chr15:40337893:- . NA TCGA-EB-A44Q-06A-11R-A266-07 MITF-FRMD4B 3 5 chr3:69739701:+ chr3:69432761:- . NA TCGA-EB-A44Q-06A-11R-A266-07 SLC12A7-LACE1 1 6 chr5:1065283:- chr6:108356690:+ INFRAME NA TCGA-EB-A44R-06A-41R-A266-07 BASP1-C5orf17 43 461 chr5:17089161:+ chr5:24177837:+ . NA TCGA-EB-A44R-06A-41R-A266-07 SUB1-ELMO1 34 80 chr5:32585625:+ chr7:37133234:- . NA TCGA-EB-A44R-06A-41R-A266-07 DNAAF5-BRAT1 14 62 chr7:729847:+ chr7:2547478:- FRAMESHIFT NA TCGA-EB-A44R-06A-41R-A266-07 NEK3-GXYLT2 11 46 chr13:52148415:- chr3:72957229:+ INFRAME NA TCGA-EB-A44R-06A-41R-A266-07 FOXK1-THSD7A 4 37 chr7:4741023:+ chr7:11382616:- INFRAME NA TCGA-EB-A44R-06A-41R-A266-07 NBPF26-PHTF1 5 18 chr1:120793496:+ chr1:113698387:- FRAMESHIFT NA TCGA-EB-A44R-06A-41R-A266-07 BRAT1-GUSBP1 4 17 chr7:2554305:- chr5:21459678:+ . NA TCGA-EB-A44R-06A-41R-A266-07 SEMA5A-BASP1 4 14 chr5:9545584:- chr5:17089073:+ . NA TCGA-EB-A44R-06A-41R-A266-07 MICALL2-HDAC9 3 9 chr7:1444652:- chr7:18644671:+ FRAMESHIFT NA TCGA-EB-A44R-06A-41R-A266-07 GLCCI1-DGKB 2 7 chr7:7969807:+ chr7:14841450:- . NA TCGA-EB-A44R-06A-41R-A266-07 GXYLT2-NEK3 1 6 chr3:72922335:+ chr13:52144891:- INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 PPIP5K2-PRODH 8 53 chr5:103173972:+ chr22:18919798:- INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 SEMA5A-RBFOX2 3 65 chr5:9545584:- chr22:35761468:- . NA TCGA-EB-A5KH-06A-11R-A27Q-07 SPECC1L-MED15 8 18 chr22:24412707:+ chr22:20551436:+ INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 TMEM167A-PAM 7 22 chr5:83061877:- chr5:102959875:+ FRAMESHIFT NA TCGA-EB-A5KH-06A-11R-A27Q-07 COMT-ZDHHC8 6 23 chr22:19941897:+ chr22:20139194:+ . NA TCGA-EB-A5KH-06A-11R-A27Q-07 RBFOX2-MED15 5 16 chr22:36028240:- chr22:20551436:+ INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 TOB2-MPPED1 6 12 chr22:41446379:- chr22:43424908:+ . NA TCGA-EB-A5KH-06A-11R-A27Q-07 ACO2-AHRR 7 5 chr22:41469182:+ chr5:422729:+ INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 DPYSL3-IL17B 4 9 chr5:147509478:- chr5:149377025:- INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 UFSP2-ZNF621 5 5 chr4:185425866:- chr3:40574383:+ . NA TCGA-EB-A5KH-06A-11R-A27Q-07 HMGXB3-PAM 2 15 chr5:150006647:+ chr5:102901356:+ INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 L3MBTL2-EFCAB6 3 4 chr22:41214026:+ chr22:43678163:- INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 TMEM167A-ABLIM3 1 12 chr5:83077321:- chr5:149216959:+ INFRAME NA TCGA-EB-A5KH-06A-11R-A27Q-07 HIC2-SNX2 2 0 chr22:21442857:+ chr5:122795266:+ FRAMESHIFT NA TCGA-EB-A5KH-06A-11R-A27Q-07 TMEM167A-NUDT12 1 4 chr5:83077321:- chr5:103560254:- . NA TCGA-EB-A5SH-06A-11R-A311-07 GAB2-NUDC 123 258 chr11:78417646:- chr1:26924089:+ INFRAME NA TCGA-EB-A5SH-06A-11R-A311-07 SBNO2-RAP1GAP 46 235 chr19:1154184:- chr1:21649796:- FRAMESHIFT NA TCGA-EB-A5SH-06A-11R-A311-07 CHERP-HSH2D 34 223 chr19:16532598:- chr19:16157210:+ FRAMESHIFT NA TCGA-EB-A5SH-06A-11R-A311-07 SMAP2-NLRX1 23 40 chr1:40374223:+ chr11:119171356:+ . NA TCGA-EB-A5SH-06A-11R-A311-07 C6orf106-PRAMEF19 5 67 chr6:34646601:- chr1:13369640:- FRAMESHIFT NA TCGA-EB-A5SH-06A-11R-A311-07 CD2AP-FKBP5 8 33 chr6:47533755:+ chr6:35720548:- . NA TCGA-EB-A5SH-06A-11R-A311-07 DUSP16-PDE2A 1 14 chr12:12562117:- chr11:72631139:- . NA TCGA-EB-A5SH-06A-11R-A311-07 ANO1-KIF21A 2 9 chr11:70078714:+ chr12:39311553:- FRAMESHIFT NA TCGA-EB-A5UL-06A-11R-A311-07 R3HCC1L-PCBP2 2 21 chr10:98186563:+ chr12:53479406:+ . NA TCGA-EB-A5UL-06A-11R-A311-07 PCBP2-R3HCC1L 3 6 chr12:53471807:+ chr10:98208101:+ . NA TCGA-EB-A5UL-06A-11R-A311-07 FNDC3B-SUCNR1 2 6 chr3:172133546:+ chr3:151879852:+ . NA TCGA-EB-A5UL-06A-11R-A311-07 CHCHD6-MYO1A 2 4 chr3:126780430:+ chr12:57031174:- . NA TCGA-EB-A5UL-06A-11R-A311-07 FNDC3B-PGM5 1 7 chr3:172133546:+ chr9:68479418:+ INFRAME NA TCGA-EB-A5UN-06A-11R-A311-07 EPC1-DIP2C 1 33 chr10:32378491:- chr10:419199:- FRAMESHIFT NA TCGA-EB-A6L9-06A-11R-A32P-07 SRBD1-C2orf91 16 49 chr2:45562653:- chr2:41938613:- FRAMESHIFT NA TCGA-EB-A6L9-06A-11R-A32P-07 PRKCE-ADGRG6 2 36 chr2:45843063:+ chr6:142437434:+ INFRAME NA TCGA-EB-A6L9-06A-11R-A32P-07 ZNF404-LYPD5 6 9 chr19:43900868:- chr19:43799834:- . NA TCGA-EB-A6L9-06A-11R-A32P-07 PEX19-AIG1 3 16 chr1:160282944:- chr6:143165082:+ FRAMESHIFT NA TCGA-EB-A6L9-06A-11R-A32P-07 YWHAE-TXLNB 2 11 chr17:1400047:- chr6:139247909:- FRAMESHIFT NA TCGA-EB-A6L9-06A-11R-A32P-07 UTRN-PITPNA 1 3 chr6:144474759:+ chr17:1548387:- FRAMESHIFT NA TCGA-EE-A17Y-06A-11R-A18T-07 RAI1-NOS2 2 3 chr17:17724159:+ chr17:27767837:- . NA TCGA-EE-A17Z-06A-11R-A18S-07 ARID1A-DGKA 98 355 chr1:26780231:+ chr12:55952905:+ INFRAME Likely Oncogenic NA TCGA-EE-A17Z-06A-11R-A18S-07 YAP1-MAML2 3 18 chr11:102206074:+ chr11:96093517:- INFRAME Likely Oncogenic NA TCGA-EE-A17Z-06A-11R-A18S-07 ASB1-SH3BP4 4 12 chr2:238436009:+ chr2:235034867:+ . NA TCGA-EE-A17Z-06A-11R-A18S-07 MED15-BCL2L13 2 16 chr22:20568631:+ chr22:17638102:+ . NA TCGA-EE-A17Z-06A-11R-A18S-07 HIP1-SLC30A5 4 7 chr7:75581237:- chr5:69129447:+ FRAMESHIFT NA TCGA-EE-A17Z-06A-11R-A18S-07 MAML2-YAP1 2 6 chr11:96341383:- chr11:102223622:+ INFRAME Likely Oncogenic NA TCGA-EE-A17Z-06A-11R-A18S-07 ZCWPW2-OSBPL10 2 2 chr3:28349203:+ chr3:31879830:- . NA TCGA-EE-A181-06A-11R-A18S-07 AKAP6-PRKD1 39 295 chr14:32600792:+ chr14:29626556:- INFRAME NA TCGA-EE-A181-06A-11R-A18S-07 GPR63-NPC1L1 2 4 chr6:96837268:- chr7:44522242:- . NA TCGA-EE-A181-06A-11R-A18S-07 SOGA3-NPC1L1 1 2 chr6:127475293:- chr7:44522242:- INFRAME NA TCGA-EE-A181-06A-11R-A18S-07 WDR33-LRP1B 1 1 chr2:127763062:- chr2:141810401:- INFRAME NA TCGA-EE-A182-06A-11R-A18T-07 ARHGEF11-PLEKHA6 4 37 chr1:157044299:- chr1:204274809:- INFRAME NA TCGA-EE-A182-06A-11R-A18T-07 CAPN2-SH2D1B 3 13 chr1:223766416:+ chr1:162399087:- INFRAME NA TCGA-EE-A182-06A-11R-A18T-07 THEM4-ARHGEF11 2 4 chr1:151888273:- chr1:156940425:- FRAMESHIFT NA TCGA-EE-A183-06A-11R-A18S-07 SPRED1-FRG1CP 13 12 chr15:38253217:+ chr20:28600461:- . NA TCGA-EE-A184-06A-11R-A18S-07 EIF3L-CECR1 65 364 chr22:37878171:+ chr22:17191810:- INFRAME NA TCGA-EE-A184-06A-11R-A18S-07 FREM2-SNAP29 13 209 chr13:38697787:+ chr22:20887679:+ INFRAME NA TCGA-EE-A184-06A-11R-A18S-07 COMT-ZDHHC11 36 59 chr22:19941897:+ chr5:825251:- . NA TCGA-EE-A184-06A-11R-A18S-07 C5orf42-KB-1639H6.2 28 41 chr5:37173785:- chr8:103021225:- . NA TCGA-EE-A184-06A-11R-A18S-07 RICTOR-LHFP 3 4 chr5:38966641:- chr13:39378526:- FRAMESHIFT NA TCGA-EE-A184-06A-11R-A18S-07 VWA8-RICTOR 1 3 chr13:41960853:- chr5:38964892:- FRAMESHIFT NA TCGA-EE-A184-06A-11R-A18S-07 ZFR-RPL3 1 2 chr5:32444229:- chr22:39318592:- FRAMESHIFT NA TCGA-EE-A20C-06A-11R-A18S-07 OSBPL5-SLC22A18AS 7 13 chr11:3165216:- chr11:2888635:- . NA TCGA-EE-A20C-06A-11R-A18S-07 POLD3-ENC1 1 4 chr11:74613010:+ chr5:74637701:- . NA TCGA-EE-A20F-06A-21R-A18S-07 CLPTM1L-VARS 269 767 chr5:1337904:- chr6:31795250:- . NA TCGA-EE-A20F-06A-21R-A18S-07 EEF1G-NXF1 66 248 chr11:62566806:- chr11:62796345:- INFRAME NA TCGA-EE-A20F-06A-21R-A18S-07 MGRN1-C16orf96 16 50 chr16:4625048:+ chr16:4571561:+ FRAMESHIFT NA TCGA-EE-A20F-06A-21R-A18S-07 SCYL3-CLPTM1L 4 10 chr1:169888676:- chr5:1325816:- INFRAME NA TCGA-EE-A20H-06A-11R-A18S-07 NPHP4-CDKN2A 51 218 chr1:5986155:- chr9:21971208:- INFRAME Likely Oncogenic NA TCGA-EE-A20I-06A-11R-A18U-07 GPR158-KIAA1217 91 306 chr10:25221157:+ chr10:24513259:+ INFRAME NA TCGA-EE-A20I-06A-11R-A18U-07 NRP2-PARD3B 14 45 chr2:205792285:+ chr2:205553324:+ FRAMESHIFT NA TCGA-EE-A20I-06A-11R-A18U-07 LMBRD2-CTNND2 16 30 chr5:36108534:- chr5:11364890:- INFRAME NA TCGA-EE-A20I-06A-11R-A18U-07 MKLN1-CDK14 9 35 chr7:131397376:+ chr7:90747681:+ INFRAME NA TCGA-EE-A20I-06A-11R-A18U-07 BBX-TBC1D23 5 30 chr3:107526398:+ chr3:100283607:+ . NA TCGA-EE-A20I-06A-11R-A18U-07 CHCHD3-MKLN1 4 18 chr7:133070142:- chr7:131411306:+ INFRAME NA TCGA-EE-A20I-06A-11R-A18U-07 MKLN1-GRM8 3 21 chr7:131411383:+ chr7:127243515:- . NA TCGA-EE-A20I-06A-11R-A18U-07 NIPBL-BASP1 2 18 chr5:37001078:+ chr5:17275208:+ . NA TCGA-EE-A20I-06A-11R-A18U-07 CDK14-TFEC 1 19 chr7:90899353:+ chr7:115984513:- INFRAME NA TCGA-EE-A20I-06A-11R-A18U-07 LMBRD2-ICE1 4 5 chr5:36109945:- chr5:5457680:+ FRAMESHIFT NA TCGA-EE-A20I-06A-11R-A18U-07 SP110-TPTE2P2 1 13 chr2:230207991:- chr13:52227096:- . NA TCGA-EE-A29A-06A-12R-A18U-07 ASTN2-AKAP2 8 29 chr9:116618324:- chr9:110136127:+ FRAMESHIFT NA TCGA-EE-A29C-06A-21R-A18S-07 NUP58-KL 5 15 chr13:25301880:+ chr13:33053767:+ FRAMESHIFT NA TCGA-EE-A29D-06A-11R-A18T-07 SENP3-FXR2 44 96 chr17:7567004:+ chr17:7595994:- INFRAME NA TCGA-EE-A29D-06A-11R-A18T-07 SCAPER-TSPAN3 42 101 chr15:76841734:- chr15:77056255:- INFRAME NA TCGA-EE-A29D-06A-11R-A18T-07 FANCD2-ARPC4 8 18 chr3:10028721:+ chr3:9800185:+ FRAMESHIFT NA TCGA-EE-A29D-06A-11R-A18T-07 MARK1-RHOU 4 29 chr1:220653352:+ chr1:228737673:+ FRAMESHIFT NA TCGA-EE-A29D-06A-11R-A18T-07 TRIM44-CD44 1 13 chr11:35735445:+ chr11:35176575:+ FRAMESHIFT NA TCGA-EE-A29D-06A-11R-A18T-07 MACROD2-SPTLC3 2 5 chr20:14085728:+ chr20:13110112:+ INFRAME NA TCGA-EE-A29E-06A-11R-A18T-07 DYM-RPL17 3 27 chr18:49460398:- chr18:49491584:- . NA TCGA-EE-A29L-06A-12R-A18S-07 ZFAND3-RPTOR 9 25 chr6:37820016:+ chr17:80891720:+ FRAMESHIFT NA TCGA-EE-A29L-06A-12R-A18S-07 SMURF2-UBAC2 9 24 chr17:64583461:- chr13:99314097:+ INFRAME NA TCGA-EE-A29L-06A-12R-A18S-07 MICU3-TGFBR3 4 34 chr8:17027660:+ chr1:91734959:- INFRAME NA TCGA-EE-A29L-06A-12R-A18S-07 USP25-SLITRK6 3 25 chr21:15791664:+ chr13:85798986:- . NA TCGA-EE-A29L-06A-12R-A18S-07 NPTX1-FBXO7 2 10 chr17:80475511:- chr22:32479133:+ INFRAME NA TCGA-EE-A29L-06A-12R-A18S-07 RHEB-IFNAR1 1 5 chr7:151470571:- chr21:33335524:+ FRAMESHIFT NA TCGA-EE-A29M-06A-11R-A18T-07 RBX1-ZNF442 2 8 chr22:40967884:+ chr19:12353114:- FRAMESHIFT NA TCGA-EE-A29P-06A-11R-A18T-07 MYO5A-FAM214A 1 2 chr15:52375304:- chr15:52678122:- . NA TCGA-EE-A29Q-06A-11R-A18T-07 PKN1-RPLP0 1 1 chr19:14467967:+ chr12:120198739:- INFRAME NA TCGA-EE-A29S-06A-11R-A18T-07 SERF1B-ANKRD55 3 10 chr5:70026515:+ chr5:56143929:- FRAMESHIFT NA TCGA-EE-A29V-06A-12R-A18S-07 CELSR1-CFAP46 38 150 chr22:46533627:- chr10:132814914:- INFRAME NA TCGA-EE-A29V-06A-12R-A18S-07 LRRFIP2-DEPTOR 17 85 chr3:37174539:- chr8:120049576:+ . NA TCGA-EE-A29V-06A-12R-A18S-07 TSPAN9-KLRG1 6 48 chr12:3083719:+ chr12:9008975:+ . NA TCGA-EE-A29V-06A-12R-A18S-07 MRPL52-C14orf93 8 28 chr14:22830254:+ chr14:22999156:- . NA TCGA-EE-A29V-06A-12R-A18S-07 RPTOR-RAB34 4 25 chr17:80545791:+ chr17:28715901:- FRAMESHIFT NA TCGA-EE-A29X-06A-11R-A18T-07 MID1-C6orf106 1 17 chrX:10620290:- chr6:34654779:- . NA TCGA-EE-A29X-06A-11R-A18T-07 SNX29-HS3ST4 2 5 chr16:12129758:+ chr16:26135612:+ INFRAME NA TCGA-EE-A2A0-06A-11R-A18T-07 RNGTT-AHI1 1 10 chr6:88769774:- chr6:135285647:- INFRAME NA TCGA-EE-A2A1-06A-11R-A18T-07 PLXNA1-TNK2 1 1 chr3:126991566:+ chr3:195888606:- INFRAME NA TCGA-EE-A2A6-06A-11R-A18T-07 DDB2-LRRC9 40 173 chr11:47217049:+ chr14:60063323:+ INFRAME NA TCGA-EE-A2A6-06A-11R-A18T-07 CALD1-AKR1B10 3 61 chr7:134891673:+ chr7:134530643:+ FRAMESHIFT NA TCGA-EE-A2A6-06A-11R-A18T-07 DAAM1-C12orf10 5 37 chr14:59331920:+ chr12:53305908:+ INFRAME NA TCGA-EE-A2A6-06A-11R-A18T-07 CKAP5-DAAM1 1 7 chr11:46821175:- chr14:59331209:+ INFRAME NA TCGA-EE-A2GB-06A-11R-A18T-07 GAREM1-PTPRM 8 35 chr18:32392895:- chr18:7888106:+ INFRAME NA TCGA-EE-A2GB-06A-11R-A18T-07 METTL21B-PIP4K2C 8 32 chr12:57773128:+ chr12:57594025:+ INFRAME NA TCGA-EE-A2GH-06A-11R-A18T-07 POMK-LSS 2 8 chr8:43103830:+ chr21:46196267:- FRAMESHIFT NA TCGA-EE-A2GI-06A-11R-A18T-07 MAP3K14-HDAC5 1 4 chr17:45265163:- chr17:44093834:- FRAMESHIFT NA TCGA-EE-A2GJ-06A-11R-A18U-07 NDST1-FAM114A2 17 72 chr5:150486023:+ chr5:154034967:- . NA TCGA-EE-A2GJ-06A-11R-A18U-07 LCP2-SLC34A1 20 49 chr5:170274301:- chr5:177393694:+ INFRAME NA TCGA-EE-A2GK-06A-11R-A18S-07 BIRC7-ZNF200 2 12 chr20:63239610:+ chr16:3235360:- . NA TCGA-EE-A2GL-06A-11R-A18S-07 HIVEP3-C1orf168 2 11 chr1:42035807:- chr1:56767938:- . NA TCGA-EE-A2GN-06A-11R-A18S-07 ABR-YWHAE 1 1 chr17:1179667:- chr17:1365058:- INFRAME NA TCGA-EE-A2GP-06A-11R-A18S-07 C6orf62-MRS2 22 78 chr6:24714318:- chr6:24423584:+ INFRAME NA TCGA-EE-A2GP-06A-11R-A18S-07 MRS2-C6orf62 3 79 chr6:24423050:+ chr6:24708911:- INFRAME NA TCGA-EE-A2GP-06A-11R-A18S-07 ATP1A1-ATG4C 12 33 chr1:116373523:+ chr1:62863992:+ INFRAME NA TCGA-EE-A2GP-06A-11R-A18S-07 USP39-REEP1 3 3 chr2:85619289:+ chr2:86282242:- INFRAME NA TCGA-EE-A2GR-06A-11R-A18S-07 SBF2-CNTN5 8 25 chr11:10193902:- chr11:100191126:+ FRAMESHIFT NA TCGA-EE-A2GR-06A-11R-A18S-07 TATDN2-IRAK2 3 30 chr3:10271015:+ chr3:10238748:+ INFRAME NA TCGA-EE-A2GR-06A-11R-A18S-07 ARRB1-PRCP 1 21 chr11:75351588:- chr11:82838574:- FRAMESHIFT NA TCGA-EE-A2GR-06A-11R-A18S-07 MAN1A2-ZNF697 1 5 chr1:117368485:+ chr1:119626137:- . NA TCGA-EE-A2GR-06A-11R-A18S-07 RAD9A-CLPB 1 3 chr11:67392078:+ chr11:72430363:- INFRAME NA TCGA-EE-A2GU-06A-11R-A18T-07 TP53-CHD3 34 182 chr17:7687377:- chr17:7895339:+ . Likely Oncogenic NA TCGA-EE-A2GU-06A-11R-A18T-07 PTPRS-TMEM8A 17 56 chr19:5293141:- chr16:384396:- . NA TCGA-EE-A2GU-06A-11R-A18T-07 RBMS1-ORC4 12 74 chr2:160367216:- chr2:147943522:- FRAMESHIFT NA TCGA-EE-A2GU-06A-11R-A18T-07 ORC4-MAPK4 11 26 chr2:147952373:- chr18:50729158:+ FRAMESHIFT NA TCGA-EE-A2M6-06A-12R-A18S-07 TNIK-STXBP5L 1 13 chr3:171084155:- chr3:121378716:+ INFRAME NA TCGA-EE-A2M6-06A-12R-A18S-07 FRMD4B-DAZL 1 8 chr3:69542206:- chr3:16598598:- . NA TCGA-EE-A2M6-06A-12R-A18S-07 NMNAT3-PLA1A 2 4 chr3:139627616:- chr3:119618019:+ INFRAME NA TCGA-EE-A2M7-06A-11R-A18U-07 TMEM248-SBDS 20 255 chr7:66951135:+ chr7:66995390:- INFRAME NA TCGA-EE-A2M7-06A-11R-A18U-07 MGAT4B-ETF1 11 51 chr5:179806487:- chr5:138518867:- FRAMESHIFT NA TCGA-EE-A2M7-06A-11R-A18U-07 RNF145-PDE4D 5 43 chr5:159169679:- chr5:59215968:- INFRAME NA TCGA-EE-A2M7-06A-11R-A18U-07 MGAM2-TTC26 6 16 chr7:142159343:+ chr7:139165132:+ INFRAME NA TCGA-EE-A2M7-06A-11R-A18U-07 GRIA1-RAD17 2 16 chr5:153706067:+ chr5:69381901:+ FRAMESHIFT NA TCGA-EE-A2M8-06A-12R-A18S-07 SCP2-STXBP3 4 23 chr1:53015043:+ chr1:108793582:+ FRAMESHIFT NA TCGA-EE-A2MC-06A-12R-A18S-07 PSMB7-PID1 49 88 chr9:124384598:- chr2:229026108:- INFRAME NA TCGA-EE-A2MC-06A-12R-A18S-07 PSEN1-STK4 3 33 chr14:73198129:+ chr20:45075018:+ FRAMESHIFT NA TCGA-EE-A2MD-06A-11R-A18T-07 PRKAA2-USP24 4 15 chr1:56645481:+ chr1:55075523:- FRAMESHIFT NA TCGA-EE-A2ME-06A-11R-A18T-07 CSNK1E-PHF5A 34 86 chr22:38314082:- chr22:41468147:- INFRAME NA TCGA-EE-A2ME-06A-11R-A18T-07 CENPM-SNU13 13 160 chr22:41943610:- chr22:41680364:- INFRAME NA TCGA-EE-A2ME-06A-11R-A18T-07 TBC1D22A-ARFGAP3 5 23 chr22:46762848:+ chr22:42799160:- FRAMESHIFT NA TCGA-EE-A2ME-06A-11R-A18T-07 ACO2-C1QTNF7 2 1 chr22:41469182:+ chr4:15435736:+ FRAMESHIFT NA TCGA-EE-A2ME-06A-11R-A18T-07 RANGAP1-FAM53A 1 5 chr22:41280933:- chr4:1641607:- INFRAME NA TCGA-EE-A2ME-06A-11R-A18T-07 ENTHD1-RNF212 1 4 chr22:39861765:- chr4:1073662:- FRAMESHIFT NA TCGA-EE-A2MF-06A-11R-A21D-07 ATP5L-AHCYL2 61 237 chr11:118401717:+ chr7:129379641:+ FRAMESHIFT NA TCGA-EE-A2MG-06A-11R-A18T-07 PNPLA6-ATP13A1 33 333 chr19:7543084:+ chr19:19645532:- INFRAME NA TCGA-EE-A2MH-06A-11R-A18S-07 VAPB-PKIA 6 31 chr20:58389517:+ chr8:78572811:+ . NA TCGA-EE-A2MH-06A-11R-A18S-07 WWP1-ZNF704 6 8 chr8:86402203:+ chr8:80821615:- . NA TCGA-EE-A2MH-06A-11R-A18S-07 NFATC2-PHACTR3 3 11 chr20:51432067:- chr20:59845189:+ FRAMESHIFT NA TCGA-EE-A2MH-06A-11R-A18S-07 STAU2-OSBPL2 3 6 chr8:73595166:- chr20:62256057:+ . NA TCGA-EE-A2MH-06A-11R-A18S-07 RB1CC1-SNX16 1 13 chr8:52656008:- chr8:81823940:- FRAMESHIFT NA TCGA-EE-A2MH-06A-11R-A18S-07 PCMTD1-SLCO5A1 2 7 chr8:51845661:- chr8:69761875:- FRAMESHIFT NA TCGA-EE-A2MH-06A-11R-A18S-07 NFATC2-DOK5 1 3 chr20:51516784:- chr20:54554933:+ INFRAME NA TCGA-EE-A2MH-06A-11R-A18S-07 RASSF3-TBK1 1 1 chr12:64610743:+ chr12:64495483:+ INFRAME NA TCGA-EE-A2MI-06A-11R-A18U-07 TRAK1-RAF1 22 102 chr3:42193898:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-EE-A2MI-06A-11R-A18U-07 RAF1-TRAK1 21 76 chr3:12604136:- chr3:42194804:+ INFRAME Likely Oncogenic NA TCGA-EE-A2MI-06A-11R-A18U-07 SSH2-VSIR 8 25 chr17:29929938:- chr10:71762026:- FRAMESHIFT NA TCGA-EE-A2MK-06A-11R-A18S-07 AEBP1-CSRP1 1 6 chr7:44107931:+ chr1:201507123:- . NA TCGA-EE-A2ML-06A-11R-A18S-07 RXRG-FAM78B 4 14 chr1:165417041:- chr1:166070763:- FRAMESHIFT NA TCGA-EE-A2ML-06A-11R-A18S-07 MIR181A1HG-CDC42BPA 4 7 chr1:198937226:- chr1:227091991:- . NA TCGA-EE-A2MM-06A-11R-A18S-07 PPP6C-DENND1A 3 13 chr9:125171090:- chr9:123523293:- . NA TCGA-EE-A2MM-06A-11R-A18S-07 FGFR1OP2-TEC 1 14 chr12:26938710:+ chr4:48156734:- . NA TCGA-EE-A2MM-06A-11R-A18S-07 FAM192A-CES2 1 3 chr16:57173728:- chr16:66938037:+ INFRAME NA TCGA-EE-A2MN-06A-11R-A18S-07 CDH11-KIFC3 5 32 chr16:64948609:- chr16:57761536:- FRAMESHIFT NA TCGA-EE-A2MN-06A-11R-A18S-07 WDR59-KIFC3 4 19 chr16:74984964:- chr16:57761171:- INFRAME NA TCGA-EE-A2MN-06A-11R-A18S-07 WDR59-CDH11 6 8 chr16:74984964:- chr16:64948787:- FRAMESHIFT NA TCGA-EE-A2MP-06A-11R-A18S-07 PCGF5-RNLS 1 3 chr10:91264520:+ chr10:88573061:- FRAMESHIFT NA TCGA-EE-A2MR-06A-11R-A18S-07 CACNA1C-DERA 18 48 chr12:2512984:+ chr12:15956936:+ INFRAME NA TCGA-EE-A2MR-06A-11R-A18S-07 ACAP2-SOX2-OT 9 49 chr3:195333028:- chr3:181790673:+ . NA TCGA-EE-A2MR-06A-11R-A18S-07 CSK-TMEM266 5 34 chr15:74782720:+ chr15:76134168:+ . NA TCGA-EE-A2MR-06A-11R-A18S-07 ZNF609-MIR9-3HG 4 17 chr15:64680862:+ chr15:89388501:+ . NA TCGA-EE-A2MR-06A-11R-A18S-07 GTPBP2-USP49 2 5 chr6:43625756:- chr6:41798929:- FRAMESHIFT NA TCGA-EE-A2MR-06A-11R-A18S-07 KHDRBS3-ANXA13 1 3 chr8:135457954:+ chr8:123702736:- INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 ZDHHC17-GLIPR1L1 57 125 chr12:76764329:+ chr12:75363102:+ FRAMESHIFT NA TCGA-EE-A2MS-06A-11R-A18S-07 R3HDM2-INHBE 15 133 chr12:57266731:- chr12:57455744:+ FRAMESHIFT NA TCGA-EE-A2MS-06A-11R-A18S-07 ERGIC1-ADGRV1 17 74 chr5:172932536:+ chr5:90788071:+ INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 LYST-NID1 14 79 chr1:235787200:- chr1:236048989:- FRAMESHIFT NA TCGA-EE-A2MS-06A-11R-A18S-07 SH3KBP1-VSIG1 17 37 chrX:19836125:- chrX:108058038:+ FRAMESHIFT NA TCGA-EE-A2MS-06A-11R-A18S-07 DMXL2-PTPRR 4 23 chr15:51622459:- chr12:70764778:- INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 PTPRR-C12orf54 3 27 chr12:70764665:- chr12:48486688:+ INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 TMEM117-MCRS1 3 6 chr12:43844928:+ chr12:49566215:- INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 ARL16-RAB37 2 9 chr17:81683536:- chr17:74729256:+ INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 PARD3-FAM83B 1 7 chr10:34814876:- chr6:54870187:+ . NA TCGA-EE-A2MS-06A-11R-A18S-07 UQCRH-TSPAN1 1 7 chr1:46309127:+ chr1:46184191:+ INFRAME NA TCGA-EE-A2MS-06A-11R-A18S-07 LIPE-CEACAM1 2 1 chr19:42423419:- chr19:42512479:- INFRAME NA TCGA-EE-A2MU-06A-21R-A18S-07 DDX17-CPT1B 7 22 chr22:38498085:- chr22:50572122:- INFRAME NA TCGA-EE-A3AA-06A-11R-A18S-07 GNB1-CASZ1 8 8 chr1:1890820:- chr1:10705544:- . NA TCGA-EE-A3AB-06A-11R-A18S-07 DCBLD1-NUS1 1 6 chr6:117503979:+ chr6:117693042:+ INFRAME NA TCGA-EE-A3AD-06A-11R-A18S-07 SHC1-IQGAP3 127 243 chr1:154968204:- chr1:156529082:- INFRAME NA TCGA-EE-A3AD-06A-11R-A18S-07 PTGIS-IFT52 13 44 chr20:49539570:- chr20:43604183:+ INFRAME NA TCGA-EE-A3AG-06A-31R-A18S-07 NOL4L-EFCAB8 1 29 chr20:32456118:- chr20:32906843:+ FRAMESHIFT NA TCGA-EE-A3AG-06A-31R-A18S-07 LMBR1-KIAA0825 2 9 chr7:156796389:- chr5:94537127:- . NA TCGA-EE-A3AG-06A-31R-A18S-07 SPATS2L-KCTD18 1 9 chr2:200329480:+ chr2:200493274:- FRAMESHIFT NA TCGA-EE-A3AG-06A-31R-A18S-07 CCDC90B-DLG2 2 4 chr11:83285873:- chr11:83874488:- FRAMESHIFT NA TCGA-EE-A3AG-06A-31R-A18S-07 HEATR5B-NCALD 2 4 chr2:37053502:- chr8:101692896:- INFRAME NA TCGA-EE-A3AH-06A-11R-A18S-07 KIFAP3-COPA 2 4 chr1:169954011:- chr1:160314125:- FRAMESHIFT NA TCGA-EE-A3AH-06A-11R-A18S-07 PACSIN2-SGSM3 1 1 chr22:42959799:- chr22:40400696:+ . NA TCGA-EE-A3J4-06A-11R-A20F-07 PACSIN2-EEFSEC 2 10 chr22:42946897:- chr3:128408069:+ . NA TCGA-EE-A3J4-06A-11R-A20F-07 RNF157-RHBDF2 2 3 chr17:76212364:- chr17:76487909:- . NA TCGA-EE-A3J5-06A-11R-A20F-07 KDM5B-RASAL2 1 4 chr1:202808102:- chr1:178420511:+ INFRAME NA TCGA-EE-A3J7-06A-11R-A20F-07 SLC25A36-CLSTN2 13 79 chr3:140963227:+ chr3:140175951:+ INFRAME NA TCGA-EE-A3JB-06A-11R-A21D-07 CFL1-LRRC41 39 108 chr11:65858097:- chr1:46286499:- INFRAME NA TCGA-EE-A3JB-06A-11R-A21D-07 COL16A1-TSGA10IP 6 58 chr1:31662334:- chr11:65946880:+ INFRAME NA TCGA-EE-A3JB-06A-11R-A21D-07 MBNL1-CPHL1P 5 18 chr3:152269092:+ chr3:149247496:- . NA TCGA-EE-A3JB-06A-11R-A21D-07 HPS3-P2RY14 1 3 chr3:149129940:+ chr3:151219642:- . NA TCGA-EE-A3JH-06A-11R-A21D-07 ZNF644-DPYD 12 4 chr1:91021990:- chr1:97234994:- . NA TCGA-EE-A3JI-06A-11R-A21D-07 FARS2-SYCP2L 6 60 chr6:5261660:+ chr6:10930370:+ . NA TCGA-EE-A3JI-06A-11R-A21D-07 CDYL-EEF1E1 8 41 chr6:4892379:+ chr6:8097467:- FRAMESHIFT NA TCGA-EE-A3JI-06A-11R-A21D-07 LYRM4-PHACTR1 2 15 chr6:5260648:- chr6:13278268:+ FRAMESHIFT NA TCGA-EE-A3JI-06A-11R-A21D-07 PTK2B-ICA1L 1 4 chr8:27420073:+ chr2:202829016:- . NA TCGA-ER-A193-06A-12R-A18S-07 DIP2B-BCAT1 25 98 chr12:50505240:+ chr12:24829897:- FRAMESHIFT NA TCGA-ER-A193-06A-12R-A18S-07 TULP3-PRMT8 14 45 chr12:2890988:+ chr12:3568706:+ FRAMESHIFT NA TCGA-ER-A193-06A-12R-A18S-07 TMBIM6-FKBP11 6 39 chr12:49741611:+ chr12:48925678:- . NA TCGA-ER-A193-06A-12R-A18S-07 TMEM117-UBC 5 35 chr12:44376724:+ chr12:124913774:- . NA TCGA-ER-A193-06A-12R-A18S-07 ST8SIA1-AEBP2 7 11 chr12:22249006:- chr12:19512398:+ FRAMESHIFT NA TCGA-ER-A193-06A-12R-A18S-07 AEBP2-ST8SIA1 1 27 chr12:19500221:+ chr12:22202038:- FRAMESHIFT NA TCGA-ER-A193-06A-12R-A18S-07 CTDSP2-ARHGAP9 2 14 chr12:57846372:- chr12:57480834:- INFRAME NA TCGA-ER-A195-06A-11R-A18U-07 APC-NREP 12 51 chr5:112707882:+ chr5:111735507:- INFRAME Likely Oncogenic NA TCGA-ER-A195-06A-11R-A18U-07 CHD1-POLK 1 34 chr5:98928539:- chr5:75552472:+ . NA TCGA-ER-A195-06A-11R-A18U-07 ZNF615-SLC17A7 1 7 chr19:52008141:- chr19:49432960:- INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 CHD2-ACSBG1 38 92 chr15:92901299:+ chr15:78173839:- FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 MCAT-GTSE1 26 101 chr22:43137081:- chr22:46312141:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 PAFAH1B1-CTDNEP1 10 66 chr17:2594006:+ chr17:7247343:- . NA TCGA-ER-A197-06A-32R-A18S-07 TBC1D2B-LUC7L2 6 63 chr15:77998187:- chr7:139398599:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 NSA2-PCDHA13 4 69 chr5:74767363:+ chr5:140978949:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 NSA2-PCDHAC1 4 69 chr5:74767363:+ chr5:140978949:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 NSA2-PCDHAC2 4 69 chr5:74767363:+ chr5:140978949:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 ZEB2-AKT3 11 34 chr2:144424796:- chr1:243545597:- FRAMESHIFT Likely Oncogenic NA TCGA-ER-A197-06A-32R-A18S-07 TEX41-GRM1 8 45 chr2:145172131:+ chr6:146027648:+ . NA TCGA-ER-A197-06A-32R-A18S-07 SDCCAG8-TFB2M 14 18 chr1:243274656:+ chr1:246551302:- INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 RAP1B-SNUPN 2 61 chr12:68611043:+ chr15:75605227:- . NA TCGA-ER-A197-06A-32R-A18S-07 TJP1-SLC20A1 7 40 chr15:29822002:- chr2:112647653:+ FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 IGFBP7-SPATA22 11 20 chr4:57040824:- chr17:3446601:- INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 MTMR3-MB 9 16 chr22:29883359:+ chr22:35637208:- . NA TCGA-ER-A197-06A-32R-A18S-07 PDGFA-OCA2 4 34 chr7:517394:- chr15:28032163:- FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 ACVR1-CDK4 6 21 chr2:157875796:- chr12:57751736:- . NA TCGA-ER-A197-06A-32R-A18S-07 NCKAP5-ARHGAP15 7 12 chr2:133213716:- chr2:143487373:+ FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 ARID1B-RCN2 2 30 chr6:156829421:+ chr15:76932361:+ INFRAME Likely Oncogenic NA TCGA-ER-A197-06A-32R-A18S-07 AKT3-PTPRR 5 17 chr1:243613671:- chr12:70684264:- INFRAME Likely Oncogenic NA TCGA-ER-A197-06A-32R-A18S-07 KLHL22-SMCR2 1 32 chr22:20488985:- chr17:17675522:- . NA TCGA-ER-A197-06A-32R-A18S-07 PLD5-PLA2R1 3 18 chr1:242524088:- chr2:159949776:- INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 CNST-LNX1 4 13 chr1:246591941:+ chr4:53507469:- INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 IGFBP7-CNST 4 12 chr4:57040824:- chr1:246591512:+ . NA TCGA-ER-A197-06A-32R-A18S-07 ITCH-CFAP47 3 16 chr20:34369470:+ chrX:36188620:+ . NA TCGA-ER-A197-06A-32R-A18S-07 ZBTB49-SLC23A2 3 7 chr4:4290352:+ chr20:4970915:- . NA TCGA-ER-A197-06A-32R-A18S-07 ARID1B-SAMD5 3 5 chr6:156829421:+ chr6:147564394:+ INFRAME Likely Oncogenic NA TCGA-ER-A197-06A-32R-A18S-07 ARID4B-SCCPDH 3 5 chr1:235194013:- chr1:246764246:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 ACSF2-ABCA9 3 4 chr17:50426389:+ chr17:69024353:- INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 PEMT-SCUBE1 2 7 chr17:17576920:- chr22:43258335:- FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 CHD2-ZNF880 3 2 chr15:92901299:+ chr19:52383849:+ FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 DGAT2-TMEM126A 2 5 chr11:75769112:+ chr11:85654063:+ FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 RFX3-ARID4B 2 5 chr9:3525747:- chr1:235196115:- . NA TCGA-ER-A197-06A-32R-A18S-07 CHST12-PLA2G4E 2 4 chr7:2403645:+ chr15:41984619:- . NA TCGA-ER-A197-06A-32R-A18S-07 PCMT1-CCT2 1 8 chr6:149773169:+ chr12:69587505:+ INFRAME NA TCGA-ER-A197-06A-32R-A18S-07 TBC1D22A-SMYD3 1 6 chr22:46762848:+ chr1:246335474:- FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 PTGDS-NOC4L 2 1 chr9:136977692:+ chr12:132150981:+ FRAMESHIFT NA TCGA-ER-A197-06A-32R-A18S-07 ARID1B-SASH1 1 4 chr6:156829421:+ chr6:148390134:+ INFRAME Likely Oncogenic NA TCGA-ER-A197-06A-32R-A18S-07 CEP135-TRIM58 1 3 chr4:55981379:+ chr1:247860617:+ INFRAME NA TCGA-ER-A198-06A-11R-A18T-07 B2M-PPP4R1 27 467 chr15:44711613:+ chr18:9562075:- FRAMESHIFT Likely Oncogenic NA TCGA-ER-A19B-06A-11R-A18S-07 DCUN1D4-USP46 5 34 chr4:51886638:+ chr4:52610617:- INFRAME NA TCGA-ER-A19C-06A-11R-A18S-07 C15orf41-RAC2 26 113 chr15:36709961:+ chr22:37232918:- INFRAME NA TCGA-ER-A19C-06A-11R-A18S-07 TAB1-PHF21B 8 33 chr22:39417849:+ chr22:44885938:- FRAMESHIFT NA TCGA-ER-A19C-06A-11R-A18S-07 ADAMTS17-NCF4 2 28 chr15:99993048:- chr22:36864045:+ FRAMESHIFT NA TCGA-ER-A19E-06A-11R-A18S-07 GPATCH11-DYM 13 96 chr2:37088440:+ chr18:49163787:- INFRAME NA TCGA-ER-A19E-06A-11R-A18S-07 XRCC2-WASL 8 76 chr7:152676041:- chr7:123692378:- FRAMESHIFT Likely Oncogenic NA TCGA-ER-A19E-06A-11R-A18S-07 MVB12B-MAMDC2 10 37 chr9:126421948:+ chr9:70218337:+ INFRAME NA TCGA-ER-A19E-06A-11R-A18S-07 DNM1L-BICD1 9 18 chr12:32679465:+ chr12:32334516:+ INFRAME NA TCGA-ER-A19E-06A-11R-A18S-07 RNF38-LCE5A 4 27 chr9:36424613:- chr1:152511514:+ . NA TCGA-ER-A19E-06A-11R-A18S-07 SMC2-AKNA 2 4 chr9:104111814:+ chr9:114364619:- INFRAME NA TCGA-ER-A19E-06A-11R-A18S-07 CORO2A-C9orf3 1 7 chr9:98157460:- chr9:95005158:+ INFRAME NA TCGA-ER-A19E-06A-11R-A18S-07 ARV1-CAPN9 1 5 chr1:230990263:+ chr1:230778973:+ FRAMESHIFT NA TCGA-ER-A19E-06A-11R-A18S-07 FAM19A4-UBA3 1 5 chr3:68880730:- chr3:69056283:- FRAMESHIFT NA TCGA-ER-A19E-06A-11R-A18S-07 EXOC4-PTPRN2 1 3 chr7:134007835:+ chr7:158489785:- FRAMESHIFT NA TCGA-ER-A19E-06A-11R-A18S-07 TM9SF2-HSP90B1 1 1 chr13:99520129:+ chr12:103938340:+ INFRAME NA TCGA-ER-A19F-06A-11R-A18S-07 XRN1-RUVBL1 25 54 chr3:142380082:- chr3:128119414:- INFRAME NA TCGA-ER-A19F-06A-11R-A18S-07 NPL-LAMC1 1 7 chr1:182816806:+ chr1:183110488:+ FRAMESHIFT NA TCGA-ER-A19G-06A-11R-A18U-07 MINOS1-PQLC2 46 152 chr1:19597109:+ chr1:19324633:+ FRAMESHIFT NA TCGA-ER-A19G-06A-11R-A18U-07 CPSF6-NUP107 2 20 chr12:69262562:+ chr12:68732637:+ FRAMESHIFT NA TCGA-ER-A19H-06A-12R-A18S-07 DCLK2-UST 7 16 chr4:150079448:+ chr6:149073833:+ INFRAME NA TCGA-ER-A19H-06A-12R-A18S-07 NELL1-SMCO4 4 24 chr11:20885540:+ chr11:93499348:- . NA TCGA-ER-A19H-06A-12R-A18S-07 PRKCSH-PGPEP1 2 15 chr19:11445473:+ chr19:18355895:+ FRAMESHIFT NA TCGA-ER-A19H-06A-12R-A18S-07 STK32B-GINS1 1 4 chr4:5139960:+ chr20:25417104:+ FRAMESHIFT NA TCGA-ER-A19J-06A-11R-A18S-07 DOCK2-LMAN2 1 5 chr5:169840852:+ chr5:177334403:- FRAMESHIFT NA TCGA-ER-A19J-06A-11R-A18S-07 LMAN2-DOCK2 1 5 chr5:177351173:- chr5:169747396:+ FRAMESHIFT NA TCGA-ER-A19L-06A-12R-A18S-07 CLCN6-RAF1 30 98 chr1:11807190:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-ER-A19L-06A-12R-A18S-07 SNX5-PCSK2 21 102 chr20:17952587:- chr20:17358327:+ INFRAME NA TCGA-ER-A19L-06A-12R-A18S-07 CYSLTR2-DLEU1 2 20 chr13:48696626:+ chr13:50104704:+ . NA TCGA-ER-A19L-06A-12R-A18S-07 ZNF79-SLC2A8 4 7 chr9:127436003:+ chr9:127399907:+ FRAMESHIFT NA TCGA-ER-A19M-06A-61R-A239-07 ZNF667-ZNF837 17 79 chr19:56462338:- chr19:58369928:- . NA TCGA-ER-A19M-06A-61R-A239-07 TBCB-SCGB1B2P 1 20 chr19:36115674:+ chr19:34577456:- . NA TCGA-ER-A19M-06A-61R-A239-07 SLC27A1-RASGRP4 2 14 chr19:17470707:+ chr19:38420262:- INFRAME NA TCGA-ER-A19M-06A-61R-A239-07 SFMBT1-PTPRG 1 10 chr3:53046460:- chr3:61989625:+ . NA TCGA-ER-A19M-06A-61R-A239-07 EPS15L1-ZNF568 2 4 chr19:16413773:- chr19:36922586:+ . NA TCGA-ER-A19N-06A-11R-A18S-07 SPAG9-RDX 59 125 chr17:51079584:- chr11:110232033:- FRAMESHIFT NA TCGA-ER-A19N-06A-11R-A18S-07 IGHG1-HSP90AB1 3 7 chr14:105741635:- chr6:44253211:+ FRAMESHIFT NA TCGA-ER-A19O-06A-11R-A18S-07 PIAS2-SKOR2 2 8 chr18:46917322:- chr18:47212151:- INFRAME NA TCGA-ER-A19S-06A-11R-A18U-07 CHD9-RBL2 1 4 chr16:53297158:+ chr16:53439016:+ FRAMESHIFT NA TCGA-ER-A19T-01A-11R-A18T-07 SPPL2A-TENM4 35 269 chr15:50719940:- chr11:79070009:- . NA TCGA-ER-A19T-01A-11R-A18T-07 GAB2-FGF7 26 263 chr11:78250157:- chr15:49424032:+ . NA TCGA-ER-A19T-01A-11R-A18T-07 FAM168A-PXDNL 15 118 chr11:73597923:- chr8:51426758:- . NA TCGA-ER-A19T-01A-11R-A18T-07 FAM168A-RNF121 20 49 chr11:73597923:- chr11:71957227:+ . NA TCGA-ER-A19T-01A-11R-A18T-07 PVT1-TPCN2 8 60 chr8:127794734:+ chr11:69062884:+ . NA TCGA-ER-A19T-01A-11R-A18T-07 RNF121-PXDNL 14 24 chr11:71957264:+ chr8:51426758:- FRAMESHIFT NA TCGA-ER-A19T-01A-11R-A18T-07 UBAC1-SHANK2 9 41 chr9:135961025:- chr11:71224796:- . NA TCGA-ER-A19T-01A-11R-A18T-07 PXDNL-USP8 5 53 chr8:51339624:- chr15:50477276:+ FRAMESHIFT NA TCGA-ER-A19T-01A-11R-A18T-07 SHC2-RNF126 9 34 chr19:460529:- chr19:652884:- INFRAME NA TCGA-ER-A19T-01A-11R-A18T-07 CD55-PLD5 10 26 chr1:207339417:+ chr1:242220115:- INFRAME NA TCGA-ER-A19T-01A-11R-A18T-07 FCHSD2-ATP6V1H 2 44 chr11:73140031:- chr8:53769743:- INFRAME NA TCGA-ER-A19T-01A-11R-A18T-07 RAB6A-RP1 4 29 chr11:73760566:- chr8:54857028:+ FRAMESHIFT NA TCGA-ER-A19T-01A-11R-A18T-07 ZNF704-IMPA1 3 30 chr8:80687226:- chr8:81671047:- FRAMESHIFT NA TCGA-ER-A19T-01A-11R-A18T-07 CACNA2D2-THRSP 4 12 chr3:50503218:- chr11:78067659:+ . NA TCGA-ER-A19T-01A-11R-A18T-07 SCYL2-ANKS1B 2 12 chr12:100267792:+ chr12:99825389:- . NA TCGA-ER-A19T-01A-11R-A18T-07 NLGN4Y-TXLNGY 2 7 chrY:14524708:+ chrY:19587210:+ . NA TCGA-ER-A19T-01A-11R-A18T-07 FBL-RASGRP4 2 6 chr19:39846291:- chr19:38410096:- FRAMESHIFT NA TCGA-ER-A19T-01A-11R-A18T-07 SLC9A1-WASF2 1 7 chr1:27153983:- chr1:27428933:- . NA TCGA-ER-A19T-01A-11R-A18T-07 SMAD3-LRP5 2 3 chr15:67066360:+ chr11:68347847:+ FRAMESHIFT Likely Oncogenic NA TCGA-ER-A19W-06A-41R-A239-07 C12orf76-IFT81 80 415 chr12:110073422:- chr12:110180422:+ FRAMESHIFT NA TCGA-ER-A19W-06A-41R-A239-07 MYO5A-TRPM1 31 195 chr15:52405287:- chr15:31042243:- INFRAME NA TCGA-ER-A19W-06A-41R-A239-07 FCHSD2-TPCN2 13 80 chr11:72902543:- chr11:69057578:+ INFRAME NA TCGA-ER-A19W-06A-41R-A239-07 WASF2-FGR 4 61 chr1:27489986:- chr1:27625151:- . NA TCGA-ER-A19W-06A-41R-A239-07 CPT1A-KMT5B 7 14 chr11:68841775:- chr11:68175183:- . NA TCGA-ER-A19W-06A-41R-A239-07 FAM118B-DCPS 7 9 chr11:126211830:+ chr11:126331405:+ . NA TCGA-ER-A19W-06A-41R-A239-07 ADCK5-HSF1 5 16 chr8:144383230:+ chr8:144313511:+ INFRAME NA TCGA-ER-A19W-06A-41R-A239-07 MBNL1-SERP1 4 18 chr3:152432920:+ chr3:150567106:- . NA TCGA-ER-A19W-06A-41R-A239-07 CLMN-SOS2 4 10 chr14:95319711:- chr14:50120384:- INFRAME NA TCGA-ER-A19W-06A-41R-A239-07 SLC38A10-NPLOC4 3 8 chr17:81289691:- chr17:81622278:- FRAMESHIFT NA TCGA-ER-A1A1-06A-11R-A18U-07 BANP-JPH3 15 17 chr16:88018667:+ chr16:87644258:+ INFRAME NA TCGA-ER-A1A1-06A-11R-A18U-07 CMSS1-LNP1 2 9 chr3:99818043:+ chr3:100429697:+ . NA TCGA-ER-A1A1-06A-11R-A18U-07 ZNF791-KMT2E 1 4 chr19:12611082:+ chr7:105073619:+ FRAMESHIFT NA TCGA-ER-A2NC-06A-11R-A18T-07 ADAM19-FNDC9 5 11 chr5:157492973:- chr5:157343543:- . NA TCGA-ER-A2ND-06A-11R-A18T-07 USP33-WASHC3 19 204 chr1:77711747:- chr12:102013192:- FRAMESHIFT NA TCGA-ER-A2ND-06A-11R-A18T-07 NFE2L2-USP33 7 15 chr2:177334393:- chr1:77701471:- . NA TCGA-ER-A2NE-06A-21R-A18T-07 AVIL-TRHDE 23 55 chr12:57808194:- chr12:72286681:+ FRAMESHIFT NA TCGA-ER-A2NE-06A-21R-A18T-07 MED31-FBXW10 7 23 chr17:6650356:- chr17:18747941:+ INFRAME NA TCGA-ER-A2NE-06A-21R-A18T-07 TXNDC17-YBX2 4 32 chr17:6641227:+ chr17:7290535:- FRAMESHIFT NA TCGA-ER-A2NE-06A-21R-A18T-07 HOXB6-EPHA5 2 12 chr17:48604480:- chr4:65643427:- . NA TCGA-ER-A2NE-06A-21R-A18T-07 HOXB3-EPHA5 2 7 chr17:48604480:- chr4:65643427:- . NA TCGA-ER-A2NE-06A-21R-A18T-07 ERICH1-PTPRR 1 8 chr8:692478:- chr12:70892977:- INFRAME NA TCGA-ER-A2NF-01A-11R-A18T-07 CBR4-GALNTL6 2 3 chr4:169002071:- chr4:172809361:+ INFRAME NA TCGA-ER-A2NG-06A-11R-A18T-07 IL12RB2-SDC3 4 19 chr1:67351089:+ chr1:30877165:- INFRAME NA TCGA-ER-A2NG-06A-11R-A18T-07 KCNAB2-ACOT7 3 8 chr1:6040645:+ chr1:6349866:- INFRAME NA TCGA-ER-A2NH-06A-11R-A18S-07 CDKL3-SIL1 12 4 chr5:134370998:- chr5:139127853:- . NA TCGA-ER-A2NH-06A-11R-A18S-07 KLF7-PARD3B 2 5 chr2:207123774:- chr2:205047581:+ INFRAME NA TCGA-ER-A3ES-06A-11R-A20F-07 BAP1-PBRM1 1 6 chr3:52404453:- chr3:52629035:- INFRAME Likely Oncogenic NA TCGA-ER-A3ET-06A-11R-A20F-07 PRR12-FDX2 16 91 chr19:49601918:+ chr19:10310940:- FRAMESHIFT NA TCGA-ER-A3ET-06A-11R-A20F-07 EGLN2-SIGLEC20P 7 105 chr19:40801415:+ chr19:51190623:+ . NA TCGA-ER-A3ET-06A-11R-A20F-07 RALY-PAK5 21 46 chr20:34031604:+ chr20:9557734:- . NA TCGA-ER-A3ET-06A-11R-A20F-07 SCAMP2-PLAUR 1 28 chr15:74873199:- chr19:43656640:- FRAMESHIFT NA TCGA-ER-A3ET-06A-11R-A20F-07 NEGR1-CYP2J2 4 11 chr1:72282319:- chr1:59916100:- FRAMESHIFT NA TCGA-ER-A3ET-06A-11R-A20F-07 OTUB1-DLG2 4 5 chr11:63986514:+ chr11:84534731:- FRAMESHIFT NA TCGA-ER-A3ET-06A-11R-A20F-07 ZNF134-RYR1 3 8 chr19:57614503:+ chr19:38543347:+ . NA TCGA-ER-A3ET-06A-11R-A20F-07 C1orf87-FGGY 1 10 chr1:59997609:- chr1:59757931:+ FRAMESHIFT NA TCGA-ER-A3ET-06A-11R-A20F-07 ADAMTS7-TMEM135 2 5 chr15:78811121:- chr11:87236638:+ FRAMESHIFT NA TCGA-ER-A3ET-06A-11R-A20F-07 XXYLT1-CEACAM7 1 5 chr3:195156449:- chr19:41684063:- FRAMESHIFT NA TCGA-ER-A3EV-06A-11R-A20F-07 ZFAND2A-PHF14 11 45 chr7:1159964:- chr7:11169416:+ . NA TCGA-ER-A3EV-06A-11R-A20F-07 CUBN-ALDH16A1 14 25 chr10:16982484:- chr19:49458486:+ INFRAME NA TCGA-ER-A3EV-06A-11R-A20F-07 DCAF8-ETV3 9 20 chr1:160237135:- chr1:157136365:- . NA TCGA-ER-A3EV-06A-11R-A20F-07 ZMIZ1-BTD 4 38 chr10:79162133:+ chr3:15635424:+ . NA TCGA-ER-A3EV-06A-11R-A20F-07 JARID2-NEDD9 4 6 chr6:15246584:+ chr6:11306155:- . NA TCGA-ER-A3EV-06A-11R-A20F-07 C10orf90-ADAM12 3 8 chr10:126646565:- chr10:126049669:- . NA TCGA-ER-A3EV-06A-11R-A20F-07 PRPF3-TARS2 1 13 chr1:150335241:+ chr1:150496482:+ INFRAME NA TCGA-ER-A3EV-06A-11R-A20F-07 RNF144B-KDM1B 3 4 chr6:18427685:+ chr6:18197057:+ INFRAME NA TCGA-ER-A3EV-06A-11R-A20F-07 METTL5-MERTK 2 5 chr2:169819561:- chr2:112028351:+ FRAMESHIFT NA TCGA-ER-A3EV-06A-11R-A20F-07 ROBO1-HMCN1 1 9 chr3:78938601:- chr1:185997429:+ INFRAME NA TCGA-ER-A3EV-06A-11R-A20F-07 MED25-ST8SIA6 2 4 chr19:49819296:+ chr10:17390620:- INFRAME NA TCGA-ER-A3EV-06A-11R-A20F-07 CABIN1-LRRC41 1 6 chr22:24043084:+ chr1:46261404:- FRAMESHIFT NA TCGA-ER-A3EV-06A-11R-A20F-07 ETV3-SEC22B 2 1 chr1:157135471:- chr1:120163370:- INFRAME NA TCGA-ER-A3EV-06A-11R-A20F-07 EXOC2-MDGA1 1 5 chr6:693019:- chr6:37644649:- . NA TCGA-ER-A3EV-06A-11R-A20F-07 JARID2-MRS2 1 4 chr6:15246584:+ chr6:24405168:+ FRAMESHIFT NA TCGA-ER-A3EV-06A-11R-A20F-07 ARAP1-DYNC2H1 1 2 chr11:72721850:- chr11:103191517:+ . NA TCGA-ER-A3EV-06A-11R-A20F-07 PAG1-FAM13C 1 2 chr8:81070112:- chr10:59247737:- . NA TCGA-ER-A3EV-06A-11R-A20F-07 CDYL-TBC1D22B 1 1 chr6:4776807:+ chr6:37282185:+ FRAMESHIFT NA TCGA-ER-A3PL-06A-11R-A239-07 FAM86C1-STX8 1 4 chr11:71796166:+ chr17:9378653:- FRAMESHIFT NA TCGA-ER-A3PL-06A-11R-A239-07 FGFR1OP-AFDN 1 2 chr6:166999514:+ chr6:167902317:+ FRAMESHIFT NA TCGA-ER-A42K-06A-11R-A24X-07 CREBBP-C16orf59 2 8 chr16:3738559:- chr16:2464039:+ INFRAME Likely Oncogenic NA TCGA-ER-A42L-06A-11R-A24X-07 APP-CCT8 15 39 chr21:26170564:- chr21:29070337:- INFRAME NA TCGA-ER-A42L-06A-11R-A24X-07 DTNB-ADCY3 3 17 chr2:25673386:- chr2:24834936:- . NA TCGA-ER-A42L-06A-11R-A24X-07 N4BP2L2-ZMYM5 1 3 chr13:32538618:- chr13:19838985:- . NA TCGA-FR-A3YN-06A-11R-A239-07 KIRREL-CD48 1 9 chr1:157993728:+ chr1:160685189:- INFRAME NA TCGA-FR-A3YN-06A-11R-A239-07 KIF27-UBQLN1 1 2 chr9:83870519:- chr9:83678599:- INFRAME NA TCGA-FR-A3YO-06A-11R-A239-07 ANKRD11-BRMS1 58 235 chr16:89418284:- chr11:66342241:- . NA TCGA-FR-A3YO-06A-11R-A239-07 UBASH3B-GRIK4 5 37 chr11:122656210:+ chr11:120952855:+ FRAMESHIFT NA TCGA-FR-A3YO-06A-11R-A239-07 SIPA1-FRMD8 1 3 chr11:65642639:+ chr11:65404864:+ INFRAME NA TCGA-FR-A44A-06A-11R-A24X-07 TMEM120B-ORAI1 8 37 chr12:121712964:+ chr12:121641041:+ INFRAME NA TCGA-FR-A44A-06A-11R-A24X-07 IL17RC-TTLL3 2 6 chr3:9928630:+ chr3:9816074:+ INFRAME NA TCGA-FR-A44A-06A-11R-A24X-07 RAB22A-L3MBTL1 1 7 chr20:58311122:+ chr20:43513476:+ . NA TCGA-FR-A729-06A-11R-A352-07 TNRC18-DGKB 16 47 chr7:5394440:- chr7:14178151:- INFRAME NA TCGA-FR-A729-06A-11R-A352-07 SNX7-WNK1 1 5 chr1:98701903:+ chr12:878212:+ INFRAME NA TCGA-FR-A7U8-06A-21R-A352-07 INTS4-ALG8 1 20 chr11:77938651:- chr11:78106912:- INFRAME NA TCGA-FR-A7U8-06A-21R-A352-07 ZNF207-LRRC37B 2 16 chr17:32369782:+ chr17:32049102:+ . NA TCGA-FR-A7U8-06A-21R-A352-07 WDHD1-DLGAP5 3 8 chr14:55000503:- chr14:55154806:- FRAMESHIFT NA TCGA-FR-A7U9-06A-11R-A352-07 ADAMTSL1-WNT5B 18 49 chr9:18474295:+ chr12:1631298:+ . NA TCGA-FR-A7U9-06A-11R-A352-07 VPS13B-CDH17 7 11 chr8:99038566:+ chr8:94177721:- INFRAME NA TCGA-FR-A7U9-06A-11R-A352-07 MTCH2-NDUFS3 3 3 chr11:47622701:- chr11:47582088:+ INFRAME NA TCGA-FR-A7UA-06A-32R-A352-07 PPFIA1-SRD5A3 2 9 chr11:70330319:+ chr4:55359346:+ FRAMESHIFT NA TCGA-FR-A7UA-06A-32R-A352-07 LRRC8D-PALMD 2 3 chr1:89843782:+ chr1:99662319:+ . NA TCGA-FR-A8YC-06A-11R-A37K-07 KANSL1-AARS 6 29 chr17:46066537:- chr16:70261157:- INFRAME NA TCGA-FR-A8YD-06A-11R-A37K-07 MICAL3-CRYBB2P1 10 1 chr22:17841822:- chr22:25520682:+ . NA TCGA-FR-A8YE-06A-11R-A37K-07 EXOC3-TRIP13 4 32 chr5:447752:+ chr5:894787:+ FRAMESHIFT NA TCGA-FR-A8YE-06A-11R-A37K-07 SUB1-GHR 1 8 chr5:32591685:+ chr5:42565864:+ FRAMESHIFT NA TCGA-FS-A1YW-06A-11R-A18T-07 GATAD2B-S100A4 3 116 chr1:153922733:- chr1:153544809:- . NA TCGA-FS-A1YW-06A-11R-A18T-07 GATAD2B-S100A3 5 32 chr1:153922733:- chr1:153548490:- . NA TCGA-FS-A1YW-06A-11R-A18T-07 FBXL18-ELFN1 3 15 chr7:5491231:- chr7:1709091:+ . NA TCGA-FS-A1YX-06A-11R-A18T-07 PGGT1B-CCDC112 1 5 chr5:115262712:- chr5:115275606:- INFRAME NA TCGA-FS-A1YX-06A-11R-A18T-07 SLC35C2-ELMO2 1 3 chr20:46354882:- chr20:46367560:- INFRAME NA TCGA-FS-A1YY-06A-11R-A18T-07 ZNF507-BCL2L13 14 98 chr19:32360618:+ chr22:17726677:+ INFRAME NA TCGA-FS-A1Z0-06A-11R-A18T-07 KCNQ5-RNF217 5 19 chr6:73003998:+ chr6:125076657:+ INFRAME NA TCGA-FS-A1Z0-06A-11R-A18T-07 PNLDC1-KLHL32 4 7 chr6:159804637:+ chr6:97041492:+ FRAMESHIFT NA TCGA-FS-A1Z0-06A-11R-A18T-07 FIG4-PPP1R14C 1 17 chr6:109716568:+ chr6:150214744:+ FRAMESHIFT NA TCGA-FS-A1Z0-06A-11R-A18T-07 PPP1R14C-AKIRIN2 2 1 chr6:150143498:+ chr6:87681763:- FRAMESHIFT NA TCGA-FS-A1Z0-06A-11R-A18T-07 AKAP7-ADGB 1 4 chr6:131219808:+ chr6:146635375:+ FRAMESHIFT NA TCGA-FS-A1Z3-06A-11R-A18T-07 SIK3-PCSK7 1 3 chr11:117098143:- chr11:117208064:- INFRAME NA TCGA-FS-A1Z4-06A-11R-A18T-07 MAP3K8-LYZL2 59 158 chr10:30459501:+ chr10:30612024:- FRAMESHIFT NA TCGA-FS-A1Z4-06A-11R-A18T-07 GABRG1-DHX8 18 76 chr4:46123810:- chr17:43489449:+ FRAMESHIFT NA TCGA-FS-A1Z4-06A-11R-A18T-07 PDDC1-ALOX5AP 12 72 chr11:767294:- chr13:30752052:+ FRAMESHIFT NA TCGA-FS-A1Z4-06A-11R-A18T-07 FMN1-KANSL1 19 24 chr15:33064957:- chr17:46172232:- . NA TCGA-FS-A1Z4-06A-11R-A18T-07 ILF3-OR1M1 5 32 chr19:10679192:+ chr19:9093232:+ . NA TCGA-FS-A1Z4-06A-11R-A18T-07 GON4L-MED27 2 21 chr1:155771067:- chr9:131893992:- INFRAME NA TCGA-FS-A1Z4-06A-11R-A18T-07 NOS1AP-POM121C 6 3 chr1:162300706:+ chr7:75419442:- FRAMESHIFT NA TCGA-FS-A1Z4-06A-11R-A18T-07 KANSL1-FMN1 5 6 chr17:46192823:- chr15:33092203:- . NA TCGA-FS-A1Z4-06A-11R-A18T-07 ODF2L-F8 2 10 chr1:86396033:- chrX:154931676:- . NA TCGA-FS-A1Z4-06A-11R-A18T-07 TRIM2-ARFIP1 1 14 chr4:153152612:+ chr4:152863606:+ . NA TCGA-FS-A1Z4-06A-11R-A18T-07 GTF2I-NOS1AP 1 13 chr7:74749451:+ chr1:162300633:+ FRAMESHIFT NA TCGA-FS-A1Z4-06A-11R-A18T-07 RHOA-DNAH1 3 2 chr3:49411820:- chr3:52326140:+ . NA TCGA-FS-A1Z4-06A-11R-A18T-07 ATAD2B-TP53I3 2 5 chr2:23926555:- chr2:24084860:- . NA TCGA-FS-A1Z4-06A-11R-A18T-07 UBTD2-C5orf58 2 4 chr5:172283596:- chr5:170245962:+ INFRAME NA TCGA-FS-A1Z4-06A-11R-A18T-07 MKLN1-KCNMB1 1 4 chr7:131414710:+ chr5:170385471:- . NA TCGA-FS-A1Z4-06A-11R-A18T-07 BRE-ZNF57 1 3 chr2:28025420:+ chr19:2915522:+ INFRAME NA TCGA-FS-A1Z4-06A-11R-A18T-07 LLGL2-CDR2L 1 1 chr17:75564507:+ chr17:74999504:+ INFRAME NA TCGA-FS-A1Z4-06A-11R-A18T-07 MLLT1-MAD1L1 1 1 chr19:6230570:- chr7:2002121:- INFRAME NA TCGA-FS-A1Z7-06A-11R-A18T-07 RNF185-DEPDC5 4 27 chr22:31160303:+ chr22:31857445:+ . NA TCGA-FS-A1ZB-06A-12R-A18S-07 SEMA3E-CEP41 14 29 chr7:83648428:- chr7:130416966:- INFRAME NA TCGA-FS-A1ZC-06A-11R-A18T-07 CAP1-MACF1 9 9 chr1:40040801:+ chr1:39468615:+ . NA TCGA-FS-A1ZD-06A-11R-A18T-07 CEP170-AKT3 23 33 chr1:243185779:- chr1:243573048:- INFRAME Likely Oncogenic NA TCGA-FS-A1ZD-06A-11R-A18T-07 CD55-CENPL 7 82 chr1:207336818:+ chr1:173811306:- . NA TCGA-FS-A1ZD-06A-11R-A18T-07 INPP5F-GRK5 17 42 chr10:119726359:+ chr10:119380815:+ INFRAME NA TCGA-FS-A1ZD-06A-11R-A18T-07 CALM3-CHRNA4 7 54 chr19:46601437:+ chr20:63344386:- . NA TCGA-FS-A1ZD-06A-11R-A18T-07 SH3D19-INPP4B 5 27 chr4:151226047:- chr4:142431385:- . Likely Oncogenic NA TCGA-FS-A1ZD-06A-11R-A18T-07 CARD8-POLR3H 3 20 chr19:48249477:- chr22:41530896:- . NA TCGA-FS-A1ZD-06A-11R-A18T-07 ADSS-BPNT1 4 12 chr1:244451635:- chr1:220089951:- . NA TCGA-FS-A1ZE-06A-11R-A18T-07 WIPI2-AIMP2 78 222 chr7:5218014:+ chr7:6023303:+ FRAMESHIFT NA TCGA-FS-A1ZE-06A-11R-A18T-07 RALGAPB-DSN1 32 185 chr20:38493132:+ chr20:36762548:- FRAMESHIFT NA TCGA-FS-A1ZE-06A-11R-A18T-07 KIAA1755-CNBD2 26 82 chr20:38223538:- chr20:35957721:+ INFRAME NA TCGA-FS-A1ZE-06A-11R-A18T-07 DHX35-TOX2 14 20 chr20:38962407:+ chr20:43973367:+ FRAMESHIFT NA TCGA-FS-A1ZE-06A-11R-A18T-07 TCF20-SLC25A17 8 12 chr22:42343479:- chr22:40779125:- . NA TCGA-FS-A1ZE-06A-11R-A18T-07 SOGA1-RALY 2 33 chr20:36862658:- chr20:34031522:+ . NA TCGA-FS-A1ZE-06A-11R-A18T-07 MAPRE1-PLAGL2 8 7 chr20:32820028:+ chr20:32202292:- . NA TCGA-FS-A1ZE-06A-11R-A18T-07 ZNF316-GNA12 3 18 chr7:6644593:+ chr7:2795143:- FRAMESHIFT NA TCGA-FS-A1ZE-06A-11R-A18T-07 MPP6-HIBADH 3 11 chr7:24680520:+ chr7:27649623:- FRAMESHIFT NA TCGA-FS-A1ZE-06A-11R-A18T-07 POFUT1-MAPRE1 2 8 chr20:32216721:+ chr20:32825925:+ . NA TCGA-FS-A1ZE-06A-11R-A18T-07 ASAP1-CDKN2B 1 6 chr8:130358017:- chr9:22006247:- INFRAME Likely Oncogenic NA TCGA-FS-A1ZF-06A-12R-A18S-07 ANKRD28-TM9SF4 5 48 chr3:15795223:- chr20:32133013:+ INFRAME NA TCGA-FS-A1ZF-06A-12R-A18S-07 METTL21B-MBD6 2 9 chr12:57773128:+ chr12:57524029:+ . NA TCGA-FS-A1ZG-06A-11R-A18T-07 MYO10-SLC12A7 24 95 chr5:16794646:- chr5:1094248:- FRAMESHIFT NA TCGA-FS-A1ZG-06A-11R-A18T-07 DAP-SEMA5A 10 40 chr5:10748175:- chr5:9380023:- . NA TCGA-FS-A1ZG-06A-11R-A18T-07 FAM134B-ANKH 5 12 chr5:16565763:- chr5:14769191:- FRAMESHIFT NA TCGA-FS-A1ZJ-06A-12R-A18S-07 RNF130-HRH2 21 51 chr5:180040453:- chr5:175682709:+ . NA TCGA-FS-A1ZJ-06A-12R-A18S-07 CHCHD6-UBA5 17 40 chr3:126730630:+ chr3:132665823:+ INFRAME NA TCGA-FS-A1ZJ-06A-12R-A18S-07 HOXA3-PARP8 11 50 chr7:27140083:- chr5:50759643:+ . NA TCGA-FS-A1ZJ-06A-12R-A18S-07 UBL3-SUCLA2 14 30 chr13:29849512:- chr13:47997023:- INFRAME NA TCGA-FS-A1ZJ-06A-12R-A18S-07 PDE8A-BNC1 8 32 chr15:85100198:+ chr15:83258126:- FRAMESHIFT NA TCGA-FS-A1ZJ-06A-12R-A18S-07 SETDB1-PIP5K1A 5 31 chr1:150951481:+ chr1:151246920:+ INFRAME NA TCGA-FS-A1ZJ-06A-12R-A18S-07 TBC1D1-LIMCH1 3 22 chr4:37891348:+ chr4:41650393:+ . NA TCGA-FS-A1ZJ-06A-12R-A18S-07 CRLF3-CRHR1 4 10 chr17:30824523:- chr17:45816463:+ FRAMESHIFT NA TCGA-FS-A1ZJ-06A-12R-A18S-07 FOXL2NB-PROS1 2 15 chr3:138947464:+ chr3:93927407:- INFRAME NA TCGA-FS-A1ZJ-06A-12R-A18S-07 TEAD1-ARNTL 1 19 chr11:12764434:+ chr11:13349945:+ . NA TCGA-FS-A1ZJ-06A-12R-A18S-07 PIK3R4-KALRN 4 6 chr3:130744486:- chr3:124395135:+ FRAMESHIFT NA TCGA-FS-A1ZJ-06A-12R-A18S-07 ATAD5-PSMA1 4 5 chr17:30855327:+ chr11:14519041:- FRAMESHIFT NA TCGA-FS-A1ZJ-06A-12R-A18S-07 DIP2C-TBX18 1 4 chr10:440871:- chr6:84760356:- FRAMESHIFT NA TCGA-FS-A1ZJ-06A-12R-A18S-07 CCDC102B-AHCTF1 1 3 chr18:69011104:+ chr1:246843928:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 DGCR2-GNB1L 50 155 chr22:19064848:- chr22:19788960:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 COMMD9-C11orf91 46 149 chr11:36278477:- chr11:33698514:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 COMMD9-CD59 46 149 chr11:36278477:- chr11:33698514:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 SLC3A2-GRAP2 17 117 chr11:62885608:+ chr22:39969411:+ INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 GRAP2-BRD1 22 68 chr22:39969533:+ chr22:49799119:- INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 RNF157-CA10 19 56 chr17:76240153:- chr17:51633650:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 BRD1-SLC3A2 10 81 chr22:49825730:- chr11:62885177:+ . NA TCGA-FS-A1ZK-06A-11R-A18T-07 SMARCD2-NUFIP2 17 45 chr17:63834705:- chr17:29267530:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 FAM222B-CRLF3 8 72 chr17:28812209:- chr17:30804108:- . NA TCGA-FS-A1ZK-06A-11R-A18T-07 SBF1-TENM4 12 43 chr22:50467338:- chr11:78757021:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 ZNF814-EIF3B 8 34 chr19:57888767:- chr7:2376950:+ INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 MBTD1-PART1 7 30 chr17:51259143:- chr5:60529404:+ . NA TCGA-FS-A1ZK-06A-11R-A18T-07 APPBP2-CA10 6 18 chr17:60500399:- chr17:51633650:- FRAMESHIFT NA TCGA-FS-A1ZK-06A-11R-A18T-07 CHIC2-SIPA1L3 6 14 chr4:54048955:- chr19:38029089:+ . NA TCGA-FS-A1ZK-06A-11R-A18T-07 SUN1-ABHD16A 9 0 chr7:816673:+ chr6:31691918:- . NA TCGA-FS-A1ZK-06A-11R-A18T-07 TJP2-RPRD2 1 17 chr9:69174432:+ chr1:150457288:+ INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 ANKRD11-CPNE7 3 8 chr16:89490245:- chr16:89591007:+ . NA TCGA-FS-A1ZK-06A-11R-A18T-07 CAPN5-OR7E1P 3 6 chr11:77116303:+ chr11:67975018:- . NA TCGA-FS-A1ZK-06A-11R-A18T-07 SPECC1L-SQLE 1 13 chr22:24369320:+ chr8:125003176:+ INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 RBFOX2-MKL1 2 8 chr22:35746473:- chr22:40463286:- INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 SYN3-C6orf48 2 8 chr22:32596674:- chr6:31835411:+ . NA TCGA-FS-A1ZK-06A-11R-A18T-07 SNU13-FGF4 1 9 chr22:41688794:- chr11:69773485:- INFRAME NA TCGA-FS-A1ZK-06A-11R-A18T-07 GNAZ-TDH 1 8 chr22:23070570:+ chr8:11364720:+ . NA TCGA-FS-A1ZK-06A-11R-A18T-07 RANGAP1-PBX2 1 8 chr22:41257948:- chr6:32188504:- FRAMESHIFT NA TCGA-FS-A1ZM-06A-12R-A18S-07 MED13-SUMO2P17 5 9 chr17:62052537:- chr17:48879345:- . NA TCGA-FS-A1ZM-06A-12R-A18S-07 UBAC2-SARM1 3 7 chr13:99200939:+ chr17:28384357:+ FRAMESHIFT NA TCGA-FS-A1ZM-06A-12R-A18S-07 HOXC10-C6orf89 1 5 chr12:53986010:+ chr6:36879008:+ . NA TCGA-FS-A1ZM-06A-12R-A18S-07 FARP1-GALR2 1 2 chr13:98143492:+ chr17:76076636:+ . NA TCGA-FS-A1ZP-06A-11R-A18T-07 C9orf85-FXN 30 146 chr9:71911836:+ chr9:69064938:+ INFRAME NA TCGA-FS-A1ZQ-06A-11R-A18U-07 GPR180-GPC6 4 17 chr13:94605549:+ chr13:94382414:+ FRAMESHIFT NA TCGA-FS-A1ZQ-06A-11R-A18U-07 PLEKHA6-NUCKS1 3 20 chr1:204367799:- chr1:205729621:- INFRAME NA TCGA-FS-A1ZQ-06A-11R-A18U-07 ABCC5-SPRR4 1 15 chr3:183927330:- chr1:152971871:+ . NA TCGA-FS-A1ZQ-06A-11R-A18U-07 RAF1-AGGF1 1 12 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-FS-A1ZS-06A-12R-A18T-07 PRCP-DLG2 2 16 chr11:82853177:- chr11:84099047:- INFRAME NA TCGA-FS-A1ZT-06A-11R-A18U-07 HIST1H2AC-TNFRSF21 3 43 chr6:26124749:+ chr6:47286595:- . NA TCGA-FS-A1ZT-06A-11R-A18U-07 RSF1-ARRB1 5 15 chr11:77672042:- chr11:75290039:- INFRAME NA TCGA-FS-A1ZT-06A-11R-A18U-07 TAF4-ENPP7P8 3 9 chr20:62064451:- chr11:71731422:+ . NA TCGA-FS-A1ZU-06A-12R-A18T-07 CALD1-SLC41A1 32 82 chr7:134891673:+ chr1:205811087:- . NA TCGA-FS-A1ZU-06A-12R-A18T-07 CDC73-KCNT2 1 7 chr1:193152444:+ chr1:196479238:- INFRAME NA TCGA-FS-A1ZY-06A-11R-A18S-07 TNRC18-TSGA13 5 37 chr7:5374055:- chr7:130671788:- FRAMESHIFT NA TCGA-FS-A1ZZ-06A-11R-A18S-07 SEC22C-MRPS28 32 183 chr3:42582193:- chr8:79919148:- . NA TCGA-FS-A1ZZ-06A-11R-A18S-07 OXSR1-ATXN7 7 26 chr3:38190839:+ chr3:63952379:+ INFRAME NA TCGA-FS-A1ZZ-06A-11R-A18S-07 AHR-CUL4B 5 23 chr7:17299329:+ chrX:120574630:- . NA TCGA-FS-A1ZZ-06A-11R-A18S-07 MRPS28-NKAIN3 4 13 chr8:80002999:- chr8:62965354:+ . NA TCGA-FS-A4F0-06A-11R-A24X-07 ACOT7-NPHP4 3 16 chr1:6349749:- chr1:5933329:- INFRAME NA TCGA-FS-A4F0-06A-11R-A24X-07 PPP1CB-EIF2B4 2 1 chr2:28752176:+ chr2:27364599:- INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 ADCY2-CLPTM1L 27 190 chr5:7789800:+ chr5:1320731:- INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 NAV2-ERC1 42 78 chr11:19892594:+ chr12:1490093:+ FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 ARFGAP3-FBLN1 17 121 chr22:42857114:- chr22:45600307:+ FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 TBC1D22A-SREBF2 14 123 chr22:46912188:+ chr22:41866831:+ INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 TSPO-CDH18 11 126 chr22:43161190:+ chr5:19981178:- . NA TCGA-FS-A4F4-06A-12R-A266-07 TSPO-LZTR1 14 57 chr22:43151604:+ chr22:20987504:+ . NA TCGA-FS-A4F4-06A-12R-A266-07 EP300-FBLN1 13 44 chr22:41155113:+ chr22:45600307:+ FRAMESHIFT Likely Oncogenic NA TCGA-FS-A4F4-06A-12R-A266-07 GRK3-EP300 11 37 chr22:25565153:+ chr22:41154995:+ FRAMESHIFT Likely Oncogenic NA TCGA-FS-A4F4-06A-12R-A266-07 TRIO-SLC9A3 13 26 chr5:14394130:+ chr5:492071:- FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 SULT4A1-TFIP11 9 37 chr22:43862214:- chr22:26503793:- INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 RAI14-CYB5R3 10 28 chr5:34686955:+ chr22:42619945:- FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 THAP7-A4GALT 5 47 chr22:21000647:- chr22:42695631:- . NA TCGA-FS-A4F4-06A-12R-A266-07 FAM109B-RAI14 8 30 chr22:42075652:+ chr5:34686872:+ . NA TCGA-FS-A4F4-06A-12R-A266-07 PI4KA-PHF21B 6 24 chr22:20834562:- chr22:44969205:- . NA TCGA-FS-A4F4-06A-12R-A266-07 PLA2G6-TMEM184B 10 4 chr22:38181784:- chr22:38231334:- . NA TCGA-FS-A4F4-06A-12R-A266-07 RANGAP1-CERK 5 18 chr22:41268097:- chr22:46687206:- FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 CYB5R3-RBX1 4 20 chr22:42619837:- chr22:40964047:+ FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 MICALL1-PRLR 2 21 chr22:37933112:+ chr5:35152973:- . NA TCGA-FS-A4F4-06A-12R-A266-07 RAB18-KIAA1549L 1 21 chr10:27509930:+ chr11:33552108:+ INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 NF2-EFCAB6 2 13 chr22:29655676:+ chr22:43687581:- INFRAME Likely Oncogenic NA TCGA-FS-A4F4-06A-12R-A266-07 WDR70-GRAMD4 4 3 chr5:37605238:+ chr22:46626751:+ . NA TCGA-FS-A4F4-06A-12R-A266-07 XYLT1-HS3ST4 2 9 chr16:17198212:- chr16:26135612:+ INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 EFCAB6-CYB5R3 3 3 chr22:43716848:- chr22:42636846:- INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 FAM118A-ST13 1 9 chr22:45310183:+ chr22:40850880:- . NA TCGA-FS-A4F4-06A-12R-A266-07 PARVB-PPARA 2 5 chr22:44024451:+ chr22:46151888:+ . NA TCGA-FS-A4F4-06A-12R-A266-07 RANGAP1-ARHGAP8 2 5 chr22:41274600:- chr22:44786457:+ . NA TCGA-FS-A4F4-06A-12R-A266-07 FAM19A5-MCAT 1 8 chr22:48576571:+ chr22:43137298:- INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 PRMT3-MALRD1 1 8 chr11:20494254:+ chr10:19387528:+ INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 ADCY2-SAMM50 2 3 chr5:7414770:+ chr22:43963286:+ INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 TBC1D22A-ARFGAP3 1 6 chr22:46793841:+ chr22:42823702:- INFRAME NA TCGA-FS-A4F4-06A-12R-A266-07 KIAA1644-TTLL12 1 3 chr22:44300879:- chr22:43183149:- FRAMESHIFT NA TCGA-FS-A4F4-06A-12R-A266-07 PTPRZ1-SRRM3 1 3 chr7:121928221:+ chr7:76235028:+ . NA TCGA-FS-A4F9-06A-11R-A24X-07 PARP11-PIK3C2G 2 15 chr12:3863836:- chr12:18640429:+ . NA TCGA-FS-A4FB-06A-11R-A266-07 API5-GANC 11 71 chr11:43322136:+ chr15:42306546:+ INFRAME NA TCGA-FS-A4FB-06A-11R-A266-07 CLCN3P1-SLC1A1 5 18 chr9:14987893:- chr9:4572204:+ . NA TCGA-FS-A4FB-06A-11R-A266-07 PLAT-C12orf66 1 1 chr8:42207494:- chr12:64215963:- . NA TCGA-FS-A4FD-06A-11R-A266-07 PRKCA-CACNG1 4 17 chr17:66689047:+ chr17:67053996:+ FRAMESHIFT NA TCGA-FW-A3I3-06A-11R-A21D-07 PEAK1-NRG4 21 73 chr15:77252367:- chr15:75943654:- . NA TCGA-FW-A3I3-06A-11R-A21D-07 FBXO33-SERINC5 6 22 chr14:39431564:- chr5:80175047:- FRAMESHIFT NA TCGA-FW-A3I3-06A-11R-A21D-07 SERINC5-MYO10 7 12 chr5:80202886:- chr5:16704685:- INFRAME NA TCGA-FW-A3I3-06A-11R-A21D-07 NSF-NFE2L1 6 8 chr17:46704854:+ chr17:48056386:+ INFRAME NA TCGA-FW-A3I3-06A-11R-A21D-07 ANKRD27-RNF38 5 6 chr19:32649682:- chr9:36376127:- INFRAME NA TCGA-FW-A3I3-06A-11R-A21D-07 GPHN-PRKCH 2 7 chr14:66508591:+ chr14:61391225:+ FRAMESHIFT NA TCGA-FW-A3I3-06A-11R-A21D-07 KCTD15-MSI2 1 10 chr19:33811552:+ chr17:57615970:+ INFRAME NA TCGA-FW-A3R5-06A-11R-A239-07 TRIM2-LRBA 36 138 chr4:153152612:+ chr4:150817257:- . NA TCGA-FW-A3R5-06A-11R-A239-07 ZNF420-SPINT2 2 4 chr19:37078570:+ chr19:38283627:+ . NA TCGA-FW-A3TU-06A-11R-A239-07 MPRIP-P4HA1 2 11 chr17:17042971:+ chr10:73030370:- FRAMESHIFT NA TCGA-FW-A3TV-06A-11R-A239-07 GIT2-SMYD5 5 57 chr12:109991627:- chr2:73218861:+ INFRAME NA TCGA-FW-A3TV-06A-11R-A239-07 TAF3-SVIL 6 33 chr10:7824560:+ chr10:29569312:- . NA TCGA-FW-A3TV-06A-11R-A239-07 HCG4P5-APOD 3 8 chr6:29942925:- chr3:195579477:- . NA TCGA-GF-A3OT-06A-23R-A239-07 ANPEP-MMP14 1 16 chr15:89790460:- chr14:22844371:+ INFRAME NA TCGA-GF-A4EO-06A-12R-A24X-07 RTN4RL1-IGHJ4 75 0 chr17:1937739:- chr14:105864257:- FRAMESHIFT NA TCGA-GF-A4EO-06A-12R-A24X-07 PDE12-ROBO2 3 5 chr3:57559388:+ chr3:77622227:+ FRAMESHIFT NA TCGA-GF-A6C8-06A-12R-A311-07 TANGO6-CFDP1 2 84 chr16:68843711:+ chr16:75305182:- FRAMESHIFT NA TCGA-GF-A6C8-06A-12R-A311-07 PRELID2-PAIP1 1 5 chr5:145764931:- chr5:43555999:- . NA TCGA-GF-A6C9-06A-11R-A311-07 ARHGAP5-LSAMP 3 30 chr14:32077435:+ chr3:116444955:- INFRAME NA TCGA-GF-A6C9-06A-11R-A311-07 CMTM7-FHIT 1 6 chr3:32454542:+ chr3:60536979:- . NA TCGA-GF-A6C9-06A-11R-A311-07 RARB-OSBPL10 1 6 chr3:25174575:+ chr3:31879830:- FRAMESHIFT NA TCGA-GN-A262-06A-11R-A18T-07 IREB2-DIAPH3 18 26 chr15:78439881:+ chr13:59924870:- INFRAME NA TCGA-GN-A264-06A-11R-A18U-07 PRPF4B-F13A1 161 223 chr6:4021466:+ chr6:6197326:- INFRAME NA TCGA-GN-A264-06A-11R-A18U-07 HDAC4-PDE11A 5 32 chr2:239352678:- chr2:177905187:- FRAMESHIFT NA TCGA-GN-A264-06A-11R-A18U-07 FMNL3-CPNE8 3 8 chr12:49707055:- chr12:38677554:- FRAMESHIFT NA TCGA-GN-A264-06A-11R-A18U-07 NIPBL-SPEF2 2 8 chr5:37046199:+ chr5:35641431:+ FRAMESHIFT NA TCGA-GN-A264-06A-11R-A18U-07 NOTCH2-REG4 2 0 chr1:119953543:- chr1:119803165:- INFRAME NA TCGA-GN-A265-06A-21R-A18T-07 AKAP13-ADAMTS7P4 6 49 chr15:85380798:+ chr15:85314984:- . NA TCGA-GN-A265-06A-21R-A18T-07 TMX1-TRIM9 2 18 chr14:51243971:+ chr14:51000840:- INFRAME NA TCGA-GN-A265-06A-21R-A18T-07 GTF3C5-PHF2 2 2 chr9:133054809:+ chr9:93673585:+ FRAMESHIFT NA TCGA-GN-A265-06A-21R-A18T-07 CDC34-MIER2 1 3 chr19:532108:+ chr19:336173:- INFRAME NA TCGA-GN-A266-06A-11R-A18T-07 SRRM2-BCAR4 2 21 chr16:2760499:+ chr16:11821755:- . NA TCGA-GN-A268-06A-11R-A18T-07 PAK1IP1-MEP1A 27 183 chr6:10702639:+ chr6:46819529:+ INFRAME NA TCGA-GN-A268-06A-11R-A18T-07 SBF2-MRGPRX3 3 10 chr11:10294015:- chr11:18132614:+ . NA TCGA-GN-A26A-06A-11R-A18T-07 CCDC33-RCN2 2 77 chr15:74203098:+ chr15:76943758:+ . NA TCGA-GN-A26A-06A-11R-A18T-07 MEF2A-WDR61 6 34 chr15:99566104:+ chr15:78295725:- . NA TCGA-GN-A26A-06A-11R-A18T-07 POGZ-HHIPL2 7 19 chr1:151408694:- chr1:222538774:- FRAMESHIFT NA TCGA-GN-A26A-06A-11R-A18T-07 ADAMTS17-AKAP13 1 36 chr15:99993048:- chr15:85721991:+ INFRAME NA TCGA-GN-A26A-06A-11R-A18T-07 HEXA-MYO9A 2 10 chr15:72375720:- chr15:71916492:- INFRAME NA TCGA-GN-A26A-06A-11R-A18T-07 SNX27-ILF2 1 6 chr1:151693483:+ chr1:153670230:- FRAMESHIFT NA TCGA-GN-A26A-06A-11R-A18T-07 FAM103A1-IGF1R 1 4 chr15:82987384:+ chr15:98891325:+ . NA TCGA-GN-A26D-06A-11R-A18T-07 RASSF3-ITGA7 891 3000 chr12:64610743:+ chr12:55685288:- INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 GNS-FAM19A2 158 896 chr12:64744809:- chr12:62207250:- . NA TCGA-GN-A26D-06A-11R-A18T-07 CNOT2-RPS11P6 148 777 chr12:70278274:+ chr12:64389033:+ . NA TCGA-GN-A26D-06A-11R-A18T-07 GNS-RAB3IP 109 924 chr12:64744809:- chr12:69812964:+ INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 NDUFC2-AAMDC 120 382 chr11:78079579:- chr11:77918061:+ FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 BCAP31-HMGB3 16 281 chrX:153720872:- chrX:150985595:+ . NA TCGA-GN-A26D-06A-11R-A18T-07 TSFM-HMGA2 35 99 chr12:57786291:+ chr12:65951383:+ INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 ZDHHC9-SLCO1A2 10 165 chrX:129843259:- chr12:21334709:- . NA TCGA-GN-A26D-06A-11R-A18T-07 USP28-DRD2 15 140 chr11:113841663:- chr11:113424682:- . NA TCGA-GN-A26D-06A-11R-A18T-07 LRIG3-ATP5B 26 80 chr12:58876445:- chr12:56645353:- INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 YAP1-TTC12 16 88 chr11:102227581:+ chr11:113368187:+ INFRAME Likely Oncogenic NA TCGA-GN-A26D-06A-11R-A18T-07 TBK1-GRIP1 22 58 chr12:64455957:+ chr12:66465422:- FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 GABRA3-SARNP 14 58 chrX:152224763:- chr12:55752840:- . NA TCGA-GN-A26D-06A-11R-A18T-07 PAK1-PDGFD 19 37 chr11:77473552:- chr11:103947724:- . NA TCGA-GN-A26D-06A-11R-A18T-07 ENDOD1-RAB30 16 33 chr11:95090227:+ chr11:82994122:- INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 MARK2-BATF2 9 50 chr11:63839560:+ chr11:64994549:- INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 FAM19A2-RAB3IP 7 48 chr12:62207172:- chr12:69812964:+ . NA TCGA-GN-A26D-06A-11R-A18T-07 R3HDM2-PPM1H 8 30 chr12:57395749:- chr12:62737586:- . NA TCGA-GN-A26D-06A-11R-A18T-07 HMGA2-GABRA3 6 29 chr12:65838569:+ chrX:152224845:- FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 PAK1-ARHGAP42 6 28 chr11:77473552:- chr11:100795105:+ . NA TCGA-GN-A26D-06A-11R-A18T-07 TBC1D15-MYF6 5 22 chr12:71873003:+ chr12:80707855:+ INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 RSF1-TRPC6 5 19 chr11:77764598:- chr11:101504798:- FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 SHMT2-SLC16A7 5 15 chr12:57234110:+ chr12:59771219:+ INFRAME NA TCGA-GN-A26D-06A-11R-A18T-07 PLXNB3-PYM1 4 12 chrX:153765580:+ chr12:55915555:- . NA TCGA-GN-A26D-06A-11R-A18T-07 ANKH-ANO6 2 13 chr5:14741827:- chr12:45302014:+ FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 CAND1-PTPRR 2 11 chr12:67282053:+ chr12:70892977:- FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 INTS4-PGR 1 8 chr11:77955942:- chr11:101091876:- FRAMESHIFT NA TCGA-GN-A26D-06A-11R-A18T-07 TESK2-KNCN 1 5 chr1:45457564:- chr1:46550002:- FRAMESHIFT NA TCGA-GN-A4U3-06A-11R-A32P-07 ESRRA-TEX40 36 206 chr11:64307504:+ chr11:64303482:+ INFRAME NA TCGA-GN-A4U3-06A-11R-A32P-07 RNF40-SLC6A10P 9 17 chr16:30774251:+ chr16:32879325:- . NA TCGA-GN-A4U3-06A-11R-A32P-07 POLD3-EFCAB5 4 3 chr11:74634979:+ chr17:29929938:+ . NA TCGA-GN-A4U4-06A-11R-A32P-07 CABIN1-GSTT2 9 7 chr22:24113748:+ chr22:23980948:+ INFRAME NA TCGA-GN-A4U7-06A-21R-A32P-07 NUMA1-YAP1 7 23 chr11:72035902:- chr11:102223622:+ INFRAME Likely Oncogenic NA TCGA-GN-A4U9-06A-11R-A32P-07 ADGRB3-CFHR1 1 8 chr6:69018499:+ chr1:196830500:+ INFRAME NA TCGA-GN-A8LK-06A-11R-A37K-07 MYO1D-MT4 22 69 chr17:32605087:- chr16:56565093:+ . NA TCGA-GN-A8LK-06A-11R-A37K-07 STIM1-PNPLA2 6 23 chr11:3856409:+ chr11:821628:+ INFRAME NA TCGA-GN-A8LL-06A-21R-A37K-07 GDPD5-SERPINH1 27 71 chr11:75477619:- chr11:75566316:+ . NA TCGA-GN-A8LL-06A-21R-A37K-07 SERPINH1-MYO7A 7 15 chr11:75566971:+ chr11:77130589:+ . NA TCGA-GN-A8LL-06A-21R-A37K-07 TANGO2-USP18 6 4 chr22:20043443:+ chr22:18176772:+ FRAMESHIFT NA TCGA-GN-A8LL-06A-21R-A37K-07 LDLRAD3-VWA5B2 3 12 chr11:36098461:+ chr3:184234631:+ INFRAME NA TCGA-GN-A8LL-06A-21R-A37K-07 TRIOBP-RAB6A 3 10 chr22:37769375:+ chr11:73720899:- INFRAME NA TCGA-GN-A8LL-06A-21R-A37K-07 ZNF429-C2CD3 1 5 chr19:21506080:+ chr11:74098255:- . NA TCGA-GN-A8LL-06A-21R-A37K-07 SCNM1-SSBP3 1 1 chr1:151166203:+ chr1:54251860:- INFRAME NA TCGA-LH-A9QB-06A-11R-A38C-07 UQCC1-RBM39 1 5 chr20:35381918:- chr20:35739017:- INFRAME NA TCGA-OD-A75X-06A-12R-A32P-07 STXBP5-SAMD5 35 236 chr6:147316407:+ chr6:147564394:+ FRAMESHIFT NA TCGA-OD-A75X-06A-12R-A32P-07 DLEU2-CAB39L 10 35 chr13:50125302:- chr13:49344238:- . NA TCGA-OD-A75X-06A-12R-A32P-07 ZNRF3-MYH9 4 5 chr22:28884066:+ chr22:36297014:- FRAMESHIFT NA TCGA-OD-A75X-06A-12R-A32P-07 SAR1A-HNRNPF 1 3 chr10:70170413:- chr10:43396590:- . NA TCGA-QB-AA9O-06A-11R-A39D-07 ANAPC5-ADAM15 71 317 chr12:121345839:- chr1:155062245:+ INFRAME NA TCGA-QB-AA9O-06A-11R-A39D-07 ARID4B-IGFN1 6 48 chr1:235327769:- chr1:201225824:+ . NA TCGA-QB-AA9O-06A-11R-A39D-07 SHC1-ANAPC5 4 22 chr1:154974248:- chr12:121342069:- . NA TCGA-QB-AA9O-06A-11R-A39D-07 FOCAD-IFT74 4 4 chr9:20823115:+ chr9:27009020:+ FRAMESHIFT NA TCGA-QB-AA9O-06A-11R-A39D-07 IPO9-S100A13 2 10 chr1:201829372:+ chr1:153627598:- . NA TCGA-QB-AA9O-06A-11R-A39D-07 SLC39A1-PFDN2 2 10 chr1:153967386:- chr1:161102375:- . NA TCGA-RP-A693-06A-13R-A311-07 HMGN1-UBE2G2 4 17 chr21:39345146:- chr21:44777417:- FRAMESHIFT NA TCGA-RP-A693-06A-13R-A311-07 UBE2G2-SON 1 4 chr21:44787920:- chr21:33546213:+ INFRAME NA TCGA-RP-A694-06A-11R-A311-07 ZNF268-TRPM3 1 19 chr12:133182030:+ chr9:70640660:- FRAMESHIFT NA TCGA-RP-A695-06A-11R-A311-07 MLLT10-SLC16A1 6 45 chr10:21534804:+ chr1:112929352:- . NA TCGA-RP-A695-06A-11R-A311-07 ARID1A-PRPF40B 6 44 chr1:26732792:+ chr12:49583562:+ . Likely Oncogenic NA TCGA-RP-A695-06A-11R-A311-07 RPAP1-SYTL1 12 19 chr15:41544219:- chr1:27347421:+ . NA TCGA-RP-A695-06A-11R-A311-07 APBA2-SOAT2 5 43 chr15:28995806:+ chr12:53118890:+ . NA TCGA-RP-A695-06A-11R-A311-07 HERC2-IGFBP6 2 5 chr15:28142238:- chr12:53100712:+ FRAMESHIFT NA TCGA-W3-A824-06A-21R-A352-07 ENAH-SCCPDH 10 63 chr1:225652686:- chr1:246758226:+ FRAMESHIFT NA TCGA-W3-A825-06A-11R-A352-07 SETD7-NPY5R 25 60 chr4:139546920:- chr4:163345714:+ . NA TCGA-W3-A825-06A-11R-A352-07 PPP1R10-MUS81 22 53 chr6:30616478:- chr11:65860675:+ . NA TCGA-W3-A825-06A-11R-A352-07 RAPGEF2-PRDM5 9 27 chr4:159193256:+ chr4:120685025:- . NA TCGA-W3-A825-06A-11R-A352-07 DPF2-PPP1R10 7 26 chr11:65333918:+ chr6:30609955:- . NA TCGA-W3-A828-06A-11R-A352-07 GOLIM4-MECOM 5 46 chr3:168024526:- chr3:169143832:- INFRAME NA TCGA-W3-A828-06A-11R-A352-07 CAT-TRIM44 6 33 chr11:34461389:+ chr11:35806358:+ FRAMESHIFT NA TCGA-W3-A828-06A-11R-A352-07 TCF20-CENPM 5 17 chr22:42209651:- chr22:41946496:- INFRAME NA TCGA-W3-A828-06A-11R-A352-07 MECOM-GOLIM4 1 3 chr3:169381187:- chr3:168010823:- INFRAME NA TCGA-W3-AA1O-06A-11R-A38C-07 ICMT-NPHP4 3 48 chr1:6234886:- chr1:5969259:- FRAMESHIFT NA TCGA-W3-AA1R-06A-11R-A39D-07 HMGXB4-MGMT 134 204 chr22:35257557:+ chr10:129707895:+ . NA TCGA-W3-AA1R-06A-11R-A39D-07 PELI2-GPHN 27 87 chr14:56178464:+ chr14:67023633:+ INFRAME NA TCGA-W3-AA1R-06A-11R-A39D-07 CMTM8-RPN1 20 50 chr3:32239119:+ chr3:128626832:- FRAMESHIFT NA TCGA-W3-AA1R-06A-11R-A39D-07 RPN1-SLC22A13 3 6 chr3:128629951:- chr3:38265994:+ INFRAME NA TCGA-W3-AA1V-06B-11R-A40A-07 ETV6-ITLN1 48 168 chr12:11650160:+ chr1:160884883:- . Likely Oncogenic NA TCGA-W3-AA1V-06B-11R-A40A-07 SLC25A16-DRGX 12 24 chr10:68488467:- chr10:49366381:- FRAMESHIFT NA TCGA-W3-AA1V-06B-11R-A40A-07 ST5-DENND5A 7 38 chr11:8831556:- chr11:9150209:- . NA TCGA-W3-AA1V-06B-11R-A40A-07 MARCH3-OPCML 1 20 chr5:127030350:- chr11:132943010:- . NA TCGA-W3-AA1W-06A-11R-A38C-07 DNMBP-CPN1 2 17 chr10:99955214:- chr10:100057152:- INFRAME NA TCGA-WE-A8K1-06A-21R-A37K-07 PLXNC1-CRADD 5 77 chr12:94304051:+ chr12:93678769:+ . NA TCGA-WE-A8K1-06A-21R-A37K-07 WDR76-IDH3A 3 77 chr15:43828366:+ chr15:78168922:+ INFRAME NA TCGA-WE-A8K1-06A-21R-A37K-07 MRPL48-SUGP2 5 15 chr11:73808350:+ chr19:19010342:- FRAMESHIFT NA TCGA-WE-A8K1-06A-21R-A37K-07 BST2-SLC27A1 2 25 chr19:17403680:- chr19:17486563:+ . NA TCGA-WE-A8K1-06A-21R-A37K-07 GLE1-SLC27A4 5 13 chr9:128509097:+ chr9:128355398:+ FRAMESHIFT NA TCGA-WE-A8K1-06A-21R-A37K-07 TCHP-MYO1H 2 5 chr12:109900426:+ chr12:109388683:+ . NA TCGA-WE-A8K1-06A-21R-A37K-07 DNM2-C19orf66 1 5 chr19:10718403:+ chr19:10086929:+ FRAMESHIFT NA TCGA-WE-A8K5-06A-11R-A37K-07 IPO7-CTR9 6 18 chr11:9384847:+ chr11:10752672:+ INFRAME NA TCGA-WE-A8K5-06A-11R-A37K-07 KANSL1-VAT1 4 15 chr17:46169531:- chr17:43016548:- . NA TCGA-WE-A8ZM-06A-11R-A37K-07 ZNF212-PDE3B 21 67 chr7:149250807:+ chr11:14818183:+ INFRAME NA TCGA-WE-A8ZM-06A-11R-A37K-07 PDE3B-ZNF212 5 87 chr11:14835095:+ chr7:149250681:+ FRAMESHIFT NA TCGA-WE-A8ZM-06A-11R-A37K-07 LUC7L2-IGSF22 3 30 chr7:139407350:+ chr11:18717000:- FRAMESHIFT NA TCGA-WE-A8ZM-06A-11R-A37K-07 CPEB1-CRTC3 3 26 chr15:82647137:- chr15:90604385:+ . NA TCGA-WE-A8ZM-06A-11R-A37K-07 UMAD1-GCK 3 16 chr7:7640821:+ chr7:44153463:- . NA TCGA-WE-A8ZM-06A-11R-A37K-07 UNC45A-RALGAPB 4 9 chr15:90950615:+ chr20:38551071:+ FRAMESHIFT NA TCGA-WE-A8ZN-06A-11R-A37K-07 JAK2-DOCK8 3 14 chr9:5055788:+ chr9:286461:+ INFRAME Likely Oncogenic NA TCGA-WE-A8ZN-06A-11R-A37K-07 FOSL1-SYT7 2 1 chr11:65900241:- chr11:61528185:- INFRAME NA TCGA-WE-A8ZO-06A-11R-A37K-07 MAP4K4-IL1R1 5 5 chr2:101877146:+ chr2:102153941:+ . NA TCGA-WE-A8ZQ-06A-41R-A37K-07 ZFP90-CBFB 2 10 chr16:68539825:+ chr16:67082213:+ INFRAME NA TCGA-WE-A8ZT-06A-11R-A37K-07 BAP1-MLLT3 49 313 chr3:52409714:- chr9:20342650:- . Likely Oncogenic NA TCGA-WE-A8ZT-06A-11R-A37K-07 CDKAL1-MICB 24 47 chr6:20548705:+ chr6:31505617:+ INFRAME NA TCGA-WE-A8ZT-06A-11R-A37K-07 UBALD2-FMN1 11 35 chr17:76265969:+ chr15:32969477:- INFRAME NA TCGA-WE-A8ZT-06A-11R-A37K-07 FOCAD-SMIM4 6 9 chr9:20720534:+ chr3:52579018:+ FRAMESHIFT NA TCGA-WE-A8ZT-06A-11R-A37K-07 FMN1-UBALD2 2 8 chr15:32926174:- chr17:76270194:+ FRAMESHIFT NA TCGA-WE-A8ZX-06A-11R-A37K-07 CHD8-NDRG2 4 14 chr14:21456032:- chr14:21023321:- . NA TCGA-WE-A8ZX-06A-11R-A37K-07 SLC2A13-FAM186A 3 9 chr12:40105253:- chr12:50334103:- INFRAME NA TCGA-WE-A8ZX-06A-11R-A37K-07 CHD8-MIR6717 4 2 chr14:21456032:- chr14:21023321:- . NA TCGA-WE-A8ZX-06A-11R-A37K-07 MIPOL1-SCFD1 3 5 chr14:37270525:+ chr14:30649528:+ INFRAME NA TCGA-WE-A8ZX-06A-11R-A37K-07 MITF-MORC1 2 5 chr3:69879383:+ chr3:109069757:- FRAMESHIFT NA TCGA-WE-A8ZX-06A-11R-A37K-07 NUMB-TSHR 1 5 chr14:73355626:- chr14:81062148:+ FRAMESHIFT NA TCGA-WE-AA9Y-06A-12R-A38C-07 UBE2E1-RAB14 1 10 chr3:23811510:+ chr9:121193419:- . NA TCGA-WE-AAA3-06A-11R-A38C-07 CYP7B1-SULF1 9 37 chr8:64798466:- chr8:69563539:+ . NA TCGA-WE-AAA3-06A-11R-A38C-07 SEC22B-WARS2 11 17 chr1:120176307:- chr1:119076607:- INFRAME NA TCGA-WE-AAA3-06A-11R-A38C-07 NKAIN3-TOX 2 12 chr8:62249127:+ chr8:58808269:- INFRAME NA TCGA-WE-AAA3-06A-11R-A38C-07 LACTB2-CYP7B1 2 8 chr8:70657756:- chr8:64624539:- INFRAME NA TCGA-YD-A89C-06A-11R-A37K-07 DNAH14-ARF1 53 398 chr1:224929835:+ chr1:228097078:+ . NA TCGA-YD-A89C-06A-11R-A37K-07 SLC22A23-LRRC49 36 124 chr6:3410188:- chr15:70904552:+ INFRAME NA TCGA-YD-A89C-06A-11R-A37K-07 NUP153-MESP1 19 109 chr6:17706277:- chr15:89750227:- INFRAME NA TCGA-YD-A89C-06A-11R-A37K-07 OBSCN-KCNK2 13 92 chr1:228337383:+ chr1:215194953:+ INFRAME NA TCGA-YD-A89C-06A-11R-A37K-07 CORO2B-SLC22A23 7 23 chr15:68579277:+ chr6:3415855:- INFRAME NA TCGA-YD-A89C-06A-11R-A37K-07 OTUD7B-HIST2H2BF 6 18 chr1:149977426:- chr1:149783260:- FRAMESHIFT NA TCGA-YD-A89C-06A-11R-A37K-07 BTBD9-CHSY1 1 9 chr6:38577600:- chr15:101178980:- FRAMESHIFT NA TCGA-YD-A89C-06A-11R-A37K-07 CHSY1-BTBD9 1 7 chr15:101235082:- chr6:38580437:- FRAMESHIFT NA TCGA-YD-A9TA-06A-11R-A39D-07 ZNF691-MAST2 5 7 chr1:42846657:+ chr1:45959386:+ . NA TCGA-YD-A9TA-06A-11R-A39D-07 ROCK1-MAP1B 2 14 chr18:20966917:- chr5:72183743:+ INFRAME NA TCGA-YD-A9TA-06A-11R-A39D-07 PPIH-CCDC30 2 10 chr1:42667440:+ chr1:42581360:+ . NA TCGA-YD-A9TA-06A-11R-A39D-07 FZD6-SDCCAG8 1 8 chr8:103330065:+ chr1:243270105:+ FRAMESHIFT NA TCGA-YD-A9TA-06A-11R-A39D-07 CCDC30-ERMAP 1 3 chr1:42589483:+ chr1:42840033:+ FRAMESHIFT NA TCGA-YD-A9TA-06A-11R-A39D-07 NLGN1-FNDC3B 1 3 chr3:173435078:+ chr3:172362633:+ . NA TCGA-YG-AA3O-06A-11R-A38C-07 GSE1-C16orf74 125 464 chr16:85648751:+ chr16:85690777:- FRAMESHIFT NA TCGA-YG-AA3O-06A-11R-A38C-07 SPG7-GSE1 35 474 chr16:89532636:+ chr16:85648552:+ INFRAME NA TCGA-YG-AA3O-06A-11R-A38C-07 JAZF1-CREB5 37 89 chr7:28180463:- chr7:28570365:+ FRAMESHIFT NA TCGA-YG-AA3O-06A-11R-A38C-07 TERF2IP-CMTM1 26 116 chr16:75648552:+ chr16:66577104:+ FRAMESHIFT NA TCGA-YG-AA3O-06A-11R-A38C-07 TERF2IP-CKLF 12 99 chr16:75648552:+ chr16:66565886:+ FRAMESHIFT NA TCGA-YG-AA3O-06A-11R-A38C-07 PAFAH1B1-ABR 29 25 chr17:2594006:+ chr17:1058867:- . NA TCGA-YG-AA3O-06A-11R-A38C-07 CLIP2-GTF2I 2 27 chr7:74380863:+ chr7:74689124:+ . NA TCGA-YG-AA3O-06A-11R-A38C-07 CREB5-JAZF1 2 3 chr7:28507737:+ chr7:27991981:- FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 UBE2V1-PAAF1 15 121 chr20:50096672:- chr11:73899146:+ INFRAME NA TCGA-YG-AA3P-06A-11R-A38C-07 CTTN-PPP6R3 17 98 chr11:70425401:+ chr11:68583043:+ FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 GAB2-ELMO2 16 74 chr11:78417646:- chr20:46387419:- FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 PPP6R3-ACER3 13 55 chr11:68537891:+ chr11:76976289:+ FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 RPL7L1-UBR2 8 68 chr6:42880966:+ chr6:42683055:+ FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 RSF1-NARS2 13 43 chr11:77820528:- chr11:78443758:- INFRAME NA TCGA-YG-AA3P-06A-11R-A38C-07 FAM104A-ACLY 11 18 chr17:73227165:- chr17:41901813:- INFRAME NA TCGA-YG-AA3P-06A-11R-A38C-07 CCND1-ANO1 10 8 chr11:69643991:+ chr11:70078542:+ . Likely Oncogenic NA TCGA-YG-AA3P-06A-11R-A38C-07 USP35-CHRDL2 3 18 chr11:78200808:+ chr11:74718832:- FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 GAB2-PTPRT 5 9 chr11:78417646:- chr20:42199388:- FRAMESHIFT Likely Oncogenic NA TCGA-YG-AA3P-06A-11R-A38C-07 MRPL48-NARS2 5 7 chr11:73825796:+ chr11:78528936:- INFRAME NA TCGA-YG-AA3P-06A-11R-A38C-07 ATP6V0A1-STAT5B 3 9 chr17:42458963:+ chr17:42232137:- . NA TCGA-YG-AA3P-06A-11R-A38C-07 UVRAG-P4HA3 1 15 chr11:75912039:+ chr11:74304412:- INFRAME NA TCGA-YG-AA3P-06A-11R-A38C-07 ARRB1-PAK1 3 4 chr11:75351588:- chr11:77392541:- . NA TCGA-YG-AA3P-06A-11R-A38C-07 RBM38-CAPN5 1 12 chr20:57393333:+ chr11:77112589:+ FRAMESHIFT NA TCGA-YG-AA3P-06A-11R-A38C-07 ZSWIM3-PTPRT 1 4 chr20:45857980:+ chr20:42885932:- FRAMESHIFT Likely Oncogenic NA TCGA-Z2-A8RT-06A-11R-A37K-07 CLINT1-UCHL3 9 38 chr5:157858930:- chr13:75560753:+ FRAMESHIFT NA TCGA-Z2-A8RT-06A-11R-A37K-07 GRAP2-ADSL 4 11 chr22:39966036:+ chr22:40349832:+ FRAMESHIFT NA TCGA-Z2-A8RT-06A-11R-A37K-07 C9orf3-TBC1D9 3 10 chr9:94726751:+ chr4:140701614:- . NA TCGA-Z2-A8RT-06A-11R-A37K-07 LRBA-TBC1D9 1 2 chr4:150735258:- chr4:140662107:- FRAMESHIFT NA TCGA-Z2-AA3S-06A-11R-A39D-07 SNRK-SUCLG2 50 386 chr3:43286675:+ chr3:67400851:- . NA TCGA-Z2-AA3S-06A-11R-A39D-07 HOXD3-MTX2 3 19 chr2:176136999:+ chr2:176296860:+ . NA TCGA-Z2-AA3S-06A-11R-A39D-07 SHTN1-HSPA12A 6 7 chr10:116968652:- chr10:116707285:- INFRAME NA TCGA-Z2-AA3S-06A-11R-A39D-07 FHIT-ARHGEF3 1 3 chr3:61200617:- chr3:56882354:- . NA TCGA-Z2-AA3V-06A-11R-A39D-07 KCNAB2-ACOT7 1 12 chr1:6040645:+ chr1:6349866:- INFRAME NA TCGA-Z2-AA3V-06A-11R-A39D-07 MYH10-RHBDD2 3 3 chr17:8546544:- chr7:75881365:+ FRAMESHIFT NA TCGA-Z2-AA3V-06A-11R-A39D-07 RGS12-NSG1 2 5 chr4:3386437:+ chr4:4409573:+ FRAMESHIFT NA TCGA-B7-5816-01A-21R-1602-13 ARHGAP26-CLDN18 58 0 chr5:142913269:+ chr3:138031723:+ . NA TCGA-B7-5816-01A-21R-1602-13 CLDN18-ARHGAP26 12 2 chr3:138031105:+ chr5:142913199:+ INFRAME NA TCGA-B7-5818-01A-11R-1602-13 CD44-SLC1A2 52 1 chr11:35221732:+ chr11:35317516:- INFRAME NA TCGA-B7-A5TN-01A-21R-A31P-31 GPRC5A-NRG1 62 101 chr12:12891664:+ chr8:32595828:+ . NA TCGA-B7-A5TN-01A-21R-A31P-31 SESN1-PPIL6 14 1 chr6:109093795:- chr6:109392937:- FRAMESHIFT NA TCGA-BR-4187-01A-01R-1131-13 SSBP2-RPS23 93 20 chr5:81750981:- chr5:82277852:- FRAMESHIFT NA TCGA-BR-4187-01A-01R-1131-13 MAP2K2-DAPK3 13 3 chr19:4123784:- chr19:3969829:- . NA TCGA-BR-4255-01A-01R-1131-13 ZZZ3-CDH1 24 18 chr1:77683262:- chr16:68801670:+ . Likely Oncogenic NA TCGA-BR-4255-01A-01R-1131-13 CDC20-DEF8 10 7 chr1:43359783:+ chr16:89959144:+ FRAMESHIFT NA TCGA-BR-4256-01A-01R-1131-13 RPL10AP5-MIR7111 52 0 chr1:242365650:+ chr6:35470578:+ . NA TCGA-BR-4267-01A-01R-1131-13 LYZ-CLDN18 13 29 chr12:69353479:+ chr3:138032392:+ . NA TCGA-BR-4267-01A-01R-1131-13 GBF1-AGBL1 15 0 chr10:102260116:+ chr15:86142004:+ FRAMESHIFT NA TCGA-BR-4280-01A-01R-1131-13 MEIS2-TRPM1 11 4 chr15:37036814:- chr15:31076984:- INFRAME NA TCGA-BR-6453-01A-11R-1802-13 CLDN18-ARHGAP26 5 0 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-BR-6454-01A-11R-1802-13 CERS5-LIMA1 55 2 chr12:50167101:- chr12:50182037:- FRAMESHIFT NA TCGA-BR-6454-01A-11R-1802-13 LIN54-PLAC8 16 2 chr4:83012792:- chr4:83117971:- . NA TCGA-BR-6456-01A-11R-1802-13 KMT2E-ZBTB8A 52 1 chr7:105066807:+ chr1:32592931:+ . NA TCGA-BR-6456-01A-11R-1802-13 KDM2A-SYNDIG1 49 3 chr11:67231960:+ chr20:24584856:+ INFRAME NA TCGA-BR-6456-01A-11R-1802-13 TNKS2-FAM107B 27 0 chr10:91842391:+ chr10:14667691:- FRAMESHIFT NA TCGA-BR-6456-01A-11R-1802-13 MTMR2-CLNS1A 14 1 chr11:95914242:- chr11:77629899:- . NA TCGA-BR-6456-01A-11R-1802-13 FAM53B-NUAK2 11 1 chr10:124681607:- chr1:205308732:- FRAMESHIFT NA TCGA-BR-6458-01A-11R-1802-13 C1orf27-EGLN1 12 0 chr1:186383156:+ chr1:231374099:- INFRAME NA TCGA-BR-6564-01A-12R-1884-13 BAIAP2L1-CYP3A7 18 1 chr7:98400802:- chr7:99731152:- FRAMESHIFT NA TCGA-BR-6566-01A-11R-1802-13 UBXN11-IGHJ2 22 0 chr1:26282851:- chr14:105865249:- . NA TCGA-BR-6706-01A-11R-1884-13 EGFR-INSL4 16 0 chr7:55019365:+ chr9:5233654:+ INFRAME Likely Oncogenic NA TCGA-BR-6706-01A-11R-1884-13 EGFR-RCL1 13 0 chr7:55019365:+ chr9:4849447:+ FRAMESHIFT Likely Oncogenic NA TCGA-BR-6802-01A-11R-1884-13 PPP6R3-MARK2 17 0 chr11:68576043:+ chr11:63895159:+ INFRAME NA TCGA-BR-6803-01A-11R-1884-13 DYRK1A-PKNOX1 12 3 chr21:37367628:+ chr21:43004326:+ . NA TCGA-BR-6852-01A-11R-1884-13 SPPL3-KNTC1 32 1 chr12:120903845:- chr12:122618343:+ FRAMESHIFT NA TCGA-BR-7197-01A-11R-2203-13 TCF3-DNAJC11 165 78 chr19:1619780:- chr1:6654039:- INFRAME NA TCGA-BR-7197-01A-11R-2203-13 ZFAND2B-CYP27A1 16 10 chr2:219207042:+ chr2:218809577:+ FRAMESHIFT NA TCGA-BR-7197-01A-11R-2203-13 OLFM2-PSENEN 7 9 chr19:9936304:- chr19:35745835:+ . NA TCGA-BR-7707-01A-11R-2055-13 FIP1L1-SCFD2 13 1 chr4:53399839:+ chr4:53313763:- INFRAME NA TCGA-BR-7715-01A-11R-2055-13 NAA15-MGST2 40 1 chr4:139301831:+ chr4:139740212:+ . NA TCGA-BR-7715-01A-11R-2055-13 SEPT11-FAM198B 37 1 chr4:76996539:+ chr4:158131012:- FRAMESHIFT NA TCGA-BR-7715-01A-11R-2055-13 PIN4-HDAC8 10 1 chrX:72196904:+ chrX:72351838:- INFRAME NA TCGA-BR-7716-01A-21R-2055-13 TOMM20-EPHB2 106 19 chr1:235128595:- chr1:22882359:+ INFRAME NA TCGA-BR-7716-01A-21R-2055-13 RAPGEF1-WDR83 65 19 chr9:131739770:- chr19:12672847:+ FRAMESHIFT NA TCGA-BR-7716-01A-21R-2055-13 SVIL-TAF3 37 7 chr10:29657969:- chr10:7963920:+ . NA TCGA-BR-7716-01A-21R-2055-13 RSU1-PARG 32 4 chr10:16752539:- chr10:49843632:- INFRAME NA TCGA-BR-7716-01A-21R-2055-13 ZMYND11-PCDH15 24 9 chr10:180128:+ chr10:54090063:- FRAMESHIFT NA TCGA-BR-7716-01A-21R-2055-13 PARD3B-SLC50A1 19 5 chr2:204546119:+ chr1:155137979:+ INFRAME NA TCGA-BR-7716-01A-21R-2055-13 PPP3CC-PIWIL2 17 7 chr8:22441458:+ chr8:22352959:+ FRAMESHIFT NA TCGA-BR-7716-01A-21R-2055-13 ADGRG7-LNP1 16 3 chr3:100669105:+ chr3:100451719:+ INFRAME NA TCGA-BR-7716-01A-21R-2055-13 DCTN1-M1AP 14 5 chr2:74378000:- chr2:74640327:- . NA TCGA-BR-7716-01A-21R-2055-13 CDK13-POU6F2 14 4 chr7:40078851:+ chr7:39339642:+ INFRAME NA TCGA-BR-7716-01A-21R-2055-13 ARHGAP39-ZNF16 6 11 chr8:144545249:- chr8:144932590:- INFRAME NA TCGA-BR-7717-01A-11R-2055-13 PINX1-HGSNAT 60 9 chr8:10826152:- chr8:43182145:+ INFRAME NA TCGA-BR-7717-01A-11R-2055-13 VAPB-RBM38 18 2 chr20:58389517:+ chr20:57392654:+ FRAMESHIFT NA TCGA-BR-7723-01A-11R-2055-13 CHMP4B-EDEM2 73 3 chr20:33811658:+ chr20:35115933:- FRAMESHIFT NA TCGA-BR-7723-01A-11R-2055-13 RANGAP1-HECTD4 18 4 chr22:41274600:- chr12:112208630:- FRAMESHIFT NA TCGA-BR-7723-01A-11R-2055-13 RNF169-POLD3 16 3 chr11:74789699:+ chr11:74611499:+ INFRAME NA TCGA-BR-7723-01A-11R-2055-13 ABCC1-DLGAP1 16 1 chr16:15949799:+ chr18:3582248:- FRAMESHIFT NA TCGA-BR-7723-01A-11R-2055-13 TMEM116-RANGAP1 14 0 chr12:112013002:- chr22:41268156:- . NA TCGA-BR-7723-01A-11R-2055-13 COMMD7-MMP24 10 4 chr20:32727893:- chr20:35263791:+ INFRAME NA TCGA-BR-7723-01A-11R-2055-13 P3H4-URI1 8 3 chr17:41811132:- chr19:29971193:+ INFRAME NA TCGA-BR-7723-01A-11R-2055-13 SHANK2-CNTN6 8 2 chr11:71147120:- chr3:1278413:+ FRAMESHIFT NA TCGA-BR-7723-01A-11R-2055-13 TRAPPC11-WWC2 8 2 chr4:183686748:+ chr4:183280776:+ INFRAME NA TCGA-BR-7851-01A-11R-2203-13 MARK2-RTN3 9 2 chr11:63839560:+ chr11:63749991:+ FRAMESHIFT NA TCGA-BR-7901-01A-11R-2203-13 BACE2-WDR81 103 151 chr21:41168575:+ chr17:1735572:+ FRAMESHIFT NA TCGA-BR-7901-01A-11R-2203-13 EDF1-DPP7 23 13 chr9:136866181:- chr9:137110950:- INFRAME NA TCGA-BR-7901-01A-11R-2203-13 BRD4-MFSD12 18 6 chr19:15332290:- chr19:3538756:- . Oncogenic NA TCGA-BR-7901-01A-11R-2203-13 LUC7L3-ABCC3 16 8 chr17:50719831:+ chr17:50667554:+ INFRAME NA TCGA-BR-7901-01A-11R-2203-13 TBL1XR1-ROCK1 14 13 chr3:177197121:- chr18:21039563:- . NA TCGA-BR-7901-01A-11R-2203-13 CYB5R3-ARFGAP3 13 6 chr22:42649295:- chr22:42799160:- FRAMESHIFT NA TCGA-BR-7901-01A-11R-2203-13 NBEAL2-ATP2A3 10 18 chr3:46979912:+ chr17:3945148:- INFRAME NA TCGA-BR-7901-01A-11R-2203-13 CWC25-PLXDC1 12 6 chr17:38812795:- chr17:39109391:- INFRAME NA TCGA-BR-7901-01A-11R-2203-13 PUM2-WDR35 10 8 chr2:20327310:- chr2:19930552:- INFRAME NA TCGA-BR-7901-01A-11R-2203-13 PLEK2-TMEM229B 10 5 chr14:67412018:- chr14:67473941:- . NA TCGA-BR-7901-01A-11R-2203-13 FAM83E-HSD17B14 9 5 chr19:48609876:- chr19:48815141:- FRAMESHIFT NA TCGA-BR-7901-01A-11R-2203-13 SRSF3-BCAR4 7 12 chr6:36594481:+ chr16:11820297:- . NA TCGA-BR-7901-01A-11R-2203-13 ZNF585B-MYRIP 6 11 chr19:37207040:- chr3:40182220:+ INFRAME NA TCGA-BR-7901-01A-11R-2203-13 PRKDC-SPIDR 2 0 chr8:47834196:- chr8:47279270:+ . NA TCGA-BR-7958-01A-21R-2343-13 PPP1R13L-RAB44 38 14 chr19:45396675:- chr6:36732673:+ . NA TCGA-BR-7959-01A-11R-2343-13 NT5DC3-KNTC1 247 106 chr12:103840949:- chr12:122610822:+ FRAMESHIFT NA TCGA-BR-7959-01A-11R-2343-13 APAF1-HOXC10 131 124 chr12:98648497:+ chr12:53989169:+ FRAMESHIFT NA TCGA-BR-7959-01A-11R-2343-13 TMPO-CS 60 32 chr12:98537572:+ chr12:56286645:- INFRAME NA TCGA-BR-7959-01A-11R-2343-13 TPPP-FAM134B 36 16 chr5:677750:- chr5:16572102:- INFRAME NA TCGA-BR-7959-01A-11R-2343-13 SRGAP1-KNTC1 26 7 chr12:63844883:+ chr12:122590607:+ FRAMESHIFT NA TCGA-BR-8058-01A-31R-2343-13 USP6NL-ITIH5 14 5 chr10:11509595:- chr10:7655675:- INFRAME NA TCGA-BR-8058-01A-31R-2343-13 FOXJ3-EIF4G3 11 8 chr1:42335626:- chr1:20942330:- . NA TCGA-BR-8059-01A-11R-2343-13 PPP1R12C-PTPRH 21 3 chr19:55112467:- chr19:55182151:- FRAMESHIFT NA TCGA-BR-8059-01A-11R-2343-13 NET1-TUBAL3 9 8 chr10:5412820:+ chr10:5395475:- FRAMESHIFT NA TCGA-BR-8077-01A-11R-2343-13 TPX2-ACLY 36 13 chr20:31742647:+ chr17:41913900:- . NA TCGA-BR-8077-01A-11R-2343-13 TFB2M-SMYD3 32 15 chr1:246564346:- chr1:245929937:- INFRAME NA TCGA-BR-8077-01A-11R-2343-13 DENND4A-HBD 21 4 chr15:65792010:- chr11:5234213:- . NA TCGA-BR-8077-01A-11R-2343-13 NUPL2-DFNA5 13 10 chr7:23182206:+ chr7:24719218:- FRAMESHIFT NA TCGA-BR-8077-01A-11R-2343-13 YAF2-ZCRB1 9 8 chr12:42210355:- chr12:42313986:- . NA TCGA-BR-8080-01A-11R-2343-13 MMP15-DRC7 34 17 chr16:58026512:+ chr16:57727299:+ INFRAME NA TCGA-BR-8080-01A-11R-2343-13 MSI2-RNF135 10 5 chr17:57401471:+ chr17:30984617:+ INFRAME NA TCGA-BR-8080-01A-11R-2343-13 TCF3-C19orf25 4 8 chr19:1619111:- chr19:1461824:- INFRAME NA TCGA-BR-8284-01A-11R-2343-13 CLDN18-ARHGAP26 39 10 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-BR-8289-01A-11R-2343-13 FAM120A-CARD19 234 90 chr9:93452389:+ chr9:93112992:+ FRAMESHIFT NA TCGA-BR-8289-01A-11R-2343-13 GALE-PITHD1 81 137 chr1:23799368:- chr1:23785673:+ . NA TCGA-BR-8289-01A-11R-2343-13 RAB1A-C7orf50 98 27 chr2:65129893:- chr7:1000551:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 CBFA2T2-ACOX1 77 3 chr20:33490301:+ chr17:75957566:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 ATP1A1-IGSF3 63 18 chr1:116403975:+ chr1:116579877:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 GDE1-FLYWCH2 54 34 chr16:19510839:- chr16:2895220:+ . NA TCGA-BR-8289-01A-11R-2343-13 FKBP11-PRKAG1 44 14 chr12:48923782:- chr12:49005852:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 IHH-NHEJ1 42 15 chr2:219055816:- chr2:219078206:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 KIAA1456-LEKR1 40 19 chr8:12952358:+ chr3:157045340:+ . NA TCGA-BR-8289-01A-11R-2343-13 CFDP1-CHST6 39 16 chr16:75395090:- chr16:75473467:- . NA TCGA-BR-8289-01A-11R-2343-13 SON-IL10RB 29 13 chr21:33559775:+ chr21:33296184:+ INFRAME NA TCGA-BR-8289-01A-11R-2343-13 TCOF1-GPX3 23 1 chr5:150361211:+ chr5:151025340:+ FRAMESHIFT NA TCGA-BR-8289-01A-11R-2343-13 SOCS1-BCAR4 17 18 chr16:11256079:- chr16:11820297:- . NA TCGA-BR-8289-01A-11R-2343-13 THRA-CDK12 19 9 chr17:40089333:+ chr17:39530631:+ FRAMESHIFT Likely Oncogenic NA TCGA-BR-8289-01A-11R-2343-13 KDM5A-NINJ2 20 1 chr12:350621:- chr12:566178:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 URI1-C19orf12 16 9 chr19:29942664:+ chr19:29702977:- FRAMESHIFT NA TCGA-BR-8289-01A-11R-2343-13 ZNF681-IMMP2L 13 12 chr19:23758747:- chr7:110963565:- FRAMESHIFT NA TCGA-BR-8289-01A-11R-2343-13 USP6NL-UPF2 13 7 chr10:11481770:- chr10:11943168:- FRAMESHIFT NA TCGA-BR-8289-01A-11R-2343-13 TECR-TGFBR3L 9 21 chr19:14529711:+ chr19:7918057:+ FRAMESHIFT NA TCGA-BR-8289-01A-11R-2343-13 TECR-GIPC1 5 34 chr19:14529711:+ chr19:14483006:- . NA TCGA-BR-8289-01A-11R-2343-13 FAM76A-GPR3 10 6 chr1:27749154:+ chr1:27393794:+ . NA TCGA-BR-8289-01A-11R-2343-13 PGM2L1-CHRDL2 9 6 chr11:74398051:- chr11:74713479:- INFRAME NA TCGA-BR-8289-01A-11R-2343-13 STK11-BSG 9 6 chr19:1207203:+ chr19:580379:+ INFRAME Likely Oncogenic NA TCGA-BR-8289-01A-11R-2343-13 PPP1R1C-EIF2B2 5 10 chr2:181954634:+ chr14:75003275:+ . NA TCGA-BR-8297-01A-12R-2343-13 SCYL3-KIFAP3 23 19 chr1:169888676:- chr1:170016624:- INFRAME NA TCGA-BR-8297-01A-12R-2343-13 STK24-DOCK9 16 6 chr13:98576745:- chr13:98797253:- FRAMESHIFT NA TCGA-BR-8297-01A-12R-2343-13 ELL-LRRC25 13 2 chr19:18521921:- chr19:18392125:- FRAMESHIFT NA TCGA-BR-8297-01A-12R-2343-13 LAMA3-NDUFS8 7 8 chr18:23784157:+ chr11:68032923:+ INFRAME NA TCGA-BR-8297-01A-12R-2343-13 CASZ1-MTOR 4 0 chr1:10796564:- chr1:11130777:- . NA TCGA-BR-8361-01A-11R-2343-13 KCMF1-DNAH6 169 69 chr2:84971467:+ chr2:84796306:+ INFRAME NA TCGA-BR-8361-01A-11R-2343-13 POGZ-PI4KB 23 19 chr1:151459152:- chr1:151294541:- . NA TCGA-BR-8361-01A-11R-2343-13 PLXNA3-ATP6AP1 21 10 chrX:154471638:+ chrX:154431830:+ INFRAME NA TCGA-BR-8361-01A-11R-2343-13 SDHC-KLHDC9 17 4 chr1:161356840:+ chr1:161100061:+ FRAMESHIFT NA TCGA-BR-8361-01A-11R-2343-13 AFMID-TMC8 13 17 chr17:78202751:+ chr17:78140834:+ FRAMESHIFT NA TCGA-BR-8361-01A-11R-2343-13 CLASRP-PPP1R37 14 6 chr19:45040311:+ chr19:45145207:+ INFRAME NA TCGA-BR-8361-01A-11R-2343-13 RPTOR-DGKZ 14 1 chr17:80754185:+ chr11:46367291:+ INFRAME NA TCGA-BR-8361-01A-11R-2343-13 PPL-ADCY9 11 1 chr16:4936984:- chr16:4007558:- FRAMESHIFT NA TCGA-BR-8363-01A-11R-2343-13 ZFP1-IGKJ4 137 0 chr16:75149198:+ chr2:88860921:- . NA TCGA-BR-8365-01A-21R-2343-13 PARD3-COLQ 9 5 chr10:34470085:- chr3:15479382:- INFRAME NA TCGA-BR-8367-01A-11R-2343-13 CLDN18-ARHGAP26 20 10 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-BR-8368-01A-11R-2343-13 TACC2-ZNF365 18 14 chr10:122143706:+ chr10:62459741:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 HEXB-FAM169A 95 36 chr5:74705320:+ chr5:74783134:- INFRAME NA TCGA-BR-8373-01A-11R-2343-13 C21orf59-URB1 71 22 chr21:32607649:- chr21:32378541:- INFRAME NA TCGA-BR-8373-01A-11R-2343-13 SMG5-PMF1 63 47 chr1:156265781:- chr1:156236288:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 PVT1-QRSL1 49 43 chr8:127794734:+ chr6:106662980:+ . NA TCGA-BR-8373-01A-11R-2343-13 MBNL2-HS6ST3 35 15 chr13:97276409:+ chr13:96832490:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 ANAPC5-KDM2B 28 21 chr12:121335533:- chr12:121430469:- INFRAME NA TCGA-BR-8373-01A-11R-2343-13 GDI2-IL2RA 28 10 chr10:5773842:- chr10:6012896:- FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 ISYNA1-SUGP2 28 9 chr19:18434536:- chr19:18991652:- . NA TCGA-BR-8373-01A-11R-2343-13 ARHGAP5-NPAS3 24 18 chr14:32094386:+ chr14:33367186:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 SLC7A7-TMEM114 27 5 chr14:22778793:- chr16:8537826:- . NA TCGA-BR-8373-01A-11R-2343-13 ITGB5-ZNF148 23 10 chr3:124809022:- chr3:125313656:- . NA TCGA-BR-8373-01A-11R-2343-13 CCND3-TRERF1 23 8 chr6:42048501:- chr6:42363079:- . NA TCGA-BR-8373-01A-11R-2343-13 IKBKAP-EPB41L4B 21 11 chr9:108933864:- chr9:109279921:- . NA TCGA-BR-8373-01A-11R-2343-13 MIB1-GREB1L 22 5 chr18:21779685:+ chr18:21508118:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 WWP2-NFAT5 16 9 chr16:69842120:+ chr16:69626403:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 TCEA3-HMGCL 17 3 chr1:23417249:- chr1:23826183:- . NA TCGA-BR-8373-01A-11R-2343-13 CMTM7-GPD1L 16 2 chr3:32392065:+ chr3:32128076:+ FRAMESHIFT NA TCGA-BR-8373-01A-11R-2343-13 ABCC3-TMEM104 12 3 chr17:50634981:+ chr17:74819750:+ INFRAME NA TCGA-BR-8373-01A-11R-2343-13 ACVR1B-ANKRD33 8 6 chr12:51981199:+ chr12:51888568:+ INFRAME NA TCGA-BR-8382-01A-11R-2402-13 SLC5A1-YWHAH 3 2 chr22:32104891:+ chr22:31956139:+ INFRAME NA TCGA-BR-8384-01A-21R-2402-13 CLDN18-ARHGAP26 3 4 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-BR-8483-01A-31R-2402-13 ACACA-RARA 984 702 chr17:37330173:- chr17:40330857:+ . NA TCGA-BR-8483-01A-31R-2402-13 PGAP3-TOP2A 118 78 chr17:39687834:- chr17:40400663:- FRAMESHIFT NA TCGA-BR-8483-01A-31R-2402-13 TADA2A-NT5C3B 10 11 chr17:37470532:+ chr17:41832477:- FRAMESHIFT NA TCGA-BR-8483-01A-31R-2402-13 CSDE1-ST7L 7 3 chr1:114736758:- chr1:112578417:- FRAMESHIFT NA TCGA-BR-8483-01A-31R-2402-13 FKBP10-ERBB2 1 14 chr17:41813279:+ chr17:39699537:+ . NA TCGA-BR-8484-01A-11R-2402-13 SMURF1-CDK14 281 172 chr7:99060599:- chr7:91045897:+ FRAMESHIFT NA TCGA-BR-8484-01A-11R-2402-13 TRRAP-ANKIB1 36 25 chr7:98985044:+ chr7:92294889:+ . NA TCGA-BR-8484-01A-11R-2402-13 PCGF3-HTT 18 16 chr4:744688:+ chr4:3134401:+ INFRAME NA TCGA-BR-8485-01A-11R-2402-13 PNPLA2-EPS8L2 30 22 chr11:822606:+ chr11:720062:+ INFRAME NA TCGA-BR-8485-01A-11R-2402-13 CAB39-GBF1 17 17 chr2:230713230:+ chr10:102365397:+ . NA TCGA-BR-8485-01A-11R-2402-13 TPD52-ZNF704 12 24 chr8:80171425:- chr8:80643129:- FRAMESHIFT NA TCGA-BR-8485-01A-11R-2402-13 FLNB-GON4L 8 8 chr3:58008856:+ chr1:155767541:- FRAMESHIFT NA TCGA-BR-8485-01A-11R-2402-13 IGHG1-COL4A1 2 21 chr14:105742341:- chr13:110198631:- INFRAME NA TCGA-BR-8485-01A-11R-2402-13 ILF3-C19orf38 5 5 chr19:10655123:+ chr19:10848441:+ . NA TCGA-BR-8485-01A-11R-2402-13 FANCA-ANKRD11 4 3 chr16:89746584:- chr16:89418368:- . Likely Oncogenic NA TCGA-BR-8485-01A-11R-2402-13 AP3D1-ABHD17A 3 4 chr19:2115233:- chr19:1881914:- . NA TCGA-BR-8590-01A-11R-2402-13 CDK12-IKZF3 46 36 chr17:39517556:+ chr17:39757965:- . Likely Oncogenic NA TCGA-BR-8590-01A-11R-2402-13 SLC12A2-MEGF10 34 26 chr5:128151396:+ chr5:127454566:+ INFRAME NA TCGA-BR-8590-01A-11R-2402-13 NACA-R3HDM2 23 52 chr12:56724452:- chr12:57295507:- FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 CASZ1-MTOR 29 17 chr1:10705492:- chr1:11228918:- . NA TCGA-BR-8590-01A-11R-2402-13 GSE1-CDH13 28 12 chr16:85613398:+ chr16:83486477:+ INFRAME NA TCGA-BR-8590-01A-11R-2402-13 MAP4-SHISA5 22 13 chr3:47857431:- chr3:48501293:- INFRAME NA TCGA-BR-8590-01A-11R-2402-13 DSTYK-NUCKS1 11 16 chr1:205211271:- chr1:205729621:- FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 BMPR2-SPATS2L 12 9 chr2:202467689:+ chr2:200412311:+ FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 PYGB-KIZ 11 8 chr20:25294292:+ chr20:21214535:+ FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 ABCC3-ACSF2 7 16 chr17:50634981:+ chr17:50471028:+ INFRAME NA TCGA-BR-8590-01A-11R-2402-13 FOXK2-RNF213 9 6 chr17:82520307:+ chr17:80287815:+ FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 PRKCI-GPR160 8 10 chr3:170268000:+ chr3:170079774:+ . NA TCGA-BR-8590-01A-11R-2402-13 EFEMP2-C6orf132 8 6 chr11:65869857:- chr6:42128778:- INFRAME NA TCGA-BR-8590-01A-11R-2402-13 NUCKS1-CNTN2 9 1 chr1:205749957:- chr1:205071947:+ FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 PMF1-SYT11 7 9 chr1:156213176:+ chr1:155880500:+ INFRAME NA TCGA-BR-8590-01A-11R-2402-13 PCBP2-STAT3 7 6 chr12:53456001:+ chr17:42331531:- FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 NOL10-ROCK2 7 5 chr2:10684567:- chr2:11183440:- FRAMESHIFT NA TCGA-BR-8590-01A-11R-2402-13 SMURF2P1-EFCAB5 7 5 chr17:30610942:+ chr17:30107834:+ . NA TCGA-BR-8590-01A-11R-2402-13 OTX1-EHBP1 5 9 chr2:63054198:+ chr2:62979188:+ INFRAME NA TCGA-BR-8590-01A-11R-2402-13 PACS1-FAM32A 5 9 chr11:66070842:+ chr19:16185624:+ INFRAME NA TCGA-BR-8590-01A-11R-2402-13 TRIM37-DNAH17 5 6 chr17:59084002:- chr17:78445680:- INFRAME NA TCGA-BR-8590-01A-11R-2402-13 EXTL3-MIDN 4 6 chr8:28622810:+ chr19:1251562:+ . NA TCGA-BR-8590-01A-11R-2402-13 CHMP1A-FANCA 2 9 chr16:89653904:- chr16:89767237:- FRAMESHIFT Likely Oncogenic NA TCGA-BR-8590-01A-11R-2402-13 LARP1B-SLC25A31 2 8 chr4:128107313:+ chr4:127744672:+ INFRAME NA TCGA-BR-8677-01A-11R-2402-13 ARID3A-TEX38 7 4 chr19:960164:+ chr1:46673024:+ FRAMESHIFT NA TCGA-BR-8677-01A-11R-2402-13 TRAF3-SIVA1 3 8 chr14:102777675:+ chr14:104766790:+ . NA TCGA-BR-8677-01A-11R-2402-13 C4orf19-TBC1D1 3 3 chr4:37558076:+ chr4:38035588:+ . NA TCGA-BR-8677-01A-11R-2402-13 ROCK1-ANKRD29 2 5 chr18:21110818:- chr18:23649193:- INFRAME NA TCGA-BR-8678-01A-11R-2402-13 NKD1-ADCY7 92 87 chr16:50549555:+ chr16:50287912:+ . NA TCGA-BR-8678-01A-11R-2402-13 FAM20B-RALGPS2 91 76 chr1:179054638:+ chr1:178877498:+ INFRAME NA TCGA-BR-8678-01A-11R-2402-13 URI1-PLEKHF1 67 38 chr19:29986417:+ chr19:29673824:+ . NA TCGA-BR-8678-01A-11R-2402-13 NSD2-NAT8L 67 35 chr4:1930770:+ chr4:2060998:+ INFRAME NA TCGA-BR-8678-01A-11R-2402-13 IP6K1-TRAIP 29 10 chr3:49786354:- chr3:49848200:- . NA TCGA-BR-8678-01A-11R-2402-13 SPECC1L-SMARCB1 19 21 chr22:24270983:+ chr22:23791756:+ . Likely Oncogenic NA TCGA-BR-8678-01A-11R-2402-13 TAP2-DAXX 16 11 chr6:32832333:- chr6:33324030:- . NA TCGA-BR-8678-01A-11R-2402-13 WDFY2-FOXO1 15 14 chr13:51584824:+ chr13:40560860:- FRAMESHIFT NA TCGA-BR-8678-01A-11R-2402-13 DPP7-EXD3 8 6 chr9:137113865:- chr9:137324143:- FRAMESHIFT NA TCGA-BR-8678-01A-11R-2402-13 RECQL5-UNC13D 6 11 chr17:75658298:- chr17:75843266:- INFRAME NA TCGA-BR-8678-01A-11R-2402-13 ITPR2-RAD17 7 5 chr12:26400128:- chr5:69410493:+ FRAMESHIFT NA TCGA-BR-A44U-01A-11R-A36D-31 CASC3-TMEM99 25 19 chr17:40141607:+ chr17:40833115:+ . NA TCGA-BR-A44U-01A-11R-A36D-31 WIPF2-ORMDL3 5 15 chr17:40219492:+ chr17:39924220:- . NA TCGA-BR-A452-01A-91R-A251-31 TESC-FBXO21 80 33 chr12:117046559:- chr12:117146277:- FRAMESHIFT NA TCGA-BR-A452-01A-91R-A251-31 POLA2-VPS51 47 21 chr11:65267609:+ chr11:65111125:+ . NA TCGA-BR-A452-01A-91R-A251-31 ADAM9-LETM2 20 4 chr8:38997160:+ chr8:38387950:+ . NA TCGA-BR-A452-01A-91R-A251-31 MAPKAPK5-ALDH2 19 6 chr12:111880527:+ chr12:111781918:+ INFRAME NA TCGA-BR-A452-01A-91R-A251-31 CHTF18-RHOT2 13 4 chr16:791967:+ chr16:668670:+ . NA TCGA-BR-A452-01A-91R-A251-31 ARHGAP1-CKAP5 12 5 chr11:46688173:- chr11:46770982:- FRAMESHIFT NA TCGA-BR-A4CR-01A-11R-A24K-31 SETD2-SCAP 40 10 chr3:47097955:- chr3:47443091:- . Likely Oncogenic NA TCGA-BR-A4CR-01A-11R-A24K-31 FAM49B-PSKH2 35 10 chr8:129862229:- chr8:86074171:- . NA TCGA-BR-A4CR-01A-11R-A24K-31 ATP11A-ULK4 33 11 chr13:112875941:+ chr3:41789843:- INFRAME NA TCGA-BR-A4CR-01A-11R-A24K-31 ASAP1-RIMS2 22 7 chr8:130358017:- chr8:104093471:+ INFRAME NA TCGA-BR-A4CR-01A-11R-A24K-31 RRBP1-RPL23AP47 20 1 chr20:17641797:- chr6:170745518:+ . NA TCGA-BR-A4J1-01A-11R-A251-31 POLR1D-RPL21 25 1 chr13:27648453:+ chr13:27253765:+ . NA TCGA-BR-A4J1-01A-11R-A251-31 ASIC2-CASC8 13 13 chr17:33291408:- chr8:127290060:- . NA TCGA-BR-A4J1-01A-11R-A251-31 CCAT1-THRA1/BTR 13 4 chr8:127218810:- chr17:48307331:+ . NA TCGA-BR-A4J1-01A-11R-A251-31 SMC1A-HUWE1 11 8 chrX:53377951:- chrX:53532752:- . NA TCGA-BR-A4J4-01A-12R-A251-31 OSBPL5-TRPM5 9 4 chr11:3104193:- chr11:2406091:- INFRAME NA TCGA-BR-A4J6-01A-11R-A251-31 LTA4H-SLC25A24 17 0 chr12:96009094:- chr1:108143710:- INFRAME NA TCGA-BR-A4J6-01A-11R-A251-31 DENND2C-BCL2L15 12 2 chr1:114618386:- chr1:113886658:- INFRAME NA TCGA-BR-A4PE-01A-31R-A251-31 R3HCC1-ENTPD4 124 23 chr8:23289153:+ chr8:23386045:- INFRAME NA TCGA-BR-A4PE-01A-31R-A251-31 DNAJC2-ALDH1A1 71 14 chr7:103344559:- chr9:72931019:- FRAMESHIFT NA TCGA-BR-A4PE-01A-31R-A251-31 SPINT1-SERP1 37 5 chr15:40845029:+ chr3:150567106:- . NA TCGA-BR-A4PE-01A-31R-A251-31 SRSF3-PTCHD4 17 3 chr6:36598983:+ chr6:48009114:- FRAMESHIFT NA TCGA-BR-A4PF-01A-11R-A251-31 EPS8-RERGL 152 45 chr12:15789161:- chr12:18088956:- . NA TCGA-BR-A4PF-01A-11R-A251-31 PLEKHA5-RERGL 76 16 chr12:19132450:+ chr12:18088956:- FRAMESHIFT NA TCGA-BR-A4PF-01A-11R-A251-31 FAR2-NFE2 38 15 chr12:29321924:+ chr12:54295304:- . NA TCGA-BR-A4PF-01A-11R-A251-31 ATP2A3-ZZEF1 31 4 chr17:3964174:- chr17:4096700:- INFRAME NA TCGA-BR-A4PF-01A-11R-A251-31 NFE2-C12orf60 24 9 chr12:54292229:- chr12:14904007:+ . NA TCGA-CD-5799-01A-11R-1602-13 CPD-WNT3 30 6 chr17:30385236:+ chr17:46773909:- FRAMESHIFT NA TCGA-CD-5799-01A-11R-1602-13 ACACA-LGALS9 24 4 chr17:37270751:- chr17:27638263:+ INFRAME NA TCGA-CD-5799-01A-11R-1602-13 CPD-ERBB2 21 3 chr17:30379514:+ chr17:39719358:+ . NA TCGA-CD-5800-01A-11R-1602-13 RAB3D-MLLT1 41 1 chr19:11335447:- chr19:6227102:- FRAMESHIFT NA TCGA-CD-5800-01A-11R-1602-13 GNB1-NADK 36 3 chr1:1890820:- chr1:1765446:- . NA TCGA-CD-5800-01A-11R-1602-13 TYK2-KEAP1 17 2 chr19:10379615:- chr19:10500080:- . Likely Oncogenic NA TCGA-CD-5800-01A-11R-1602-13 NSD2-CFAP99 16 2 chr4:1871542:+ chr4:2458723:+ . NA TCGA-CD-5803-01A-11R-1602-13 TULP4-AHCYL1 16 0 chr6:158232303:+ chr1:110018552:+ . NA TCGA-CD-5803-01A-11R-1602-13 TMEM242-TIAM2 9 1 chr6:157318782:- chr6:154907730:+ . NA TCGA-CD-5804-01A-12R-2055-13 USP48-WNT4 11 3 chr1:21736446:- chr1:22121576:- INFRAME NA TCGA-CD-8524-01A-11R-2343-13 TNRC18-RNF216 52 28 chr7:5421060:- chr7:5641376:- FRAMESHIFT NA TCGA-CD-8524-01A-11R-2343-13 ANKRD11-ERGIC2 39 57 chr16:89490245:- chr12:29371670:- . NA TCGA-CD-8524-01A-11R-2343-13 B3GLCT-MRPS35 32 7 chr13:31215100:+ chr12:27719808:+ INFRAME NA TCGA-CD-8524-01A-11R-2343-13 ARL5A-IL1B 13 16 chr2:151812357:- chr2:112836244:- . NA TCGA-CD-8524-01A-11R-2343-13 TLK1-XPO7 16 4 chr2:171160290:- chr8:21966857:+ FRAMESHIFT NA TCGA-CD-8524-01A-11R-2343-13 CYB5B-SSPN 11 2 chr16:69424857:+ chr12:26252868:+ INFRAME NA TCGA-CD-8526-01A-11R-2343-13 MIB1-ANKRD29 36 8 chr18:21705123:+ chr18:23601309:- . NA TCGA-CD-8526-01A-11R-2343-13 CPS1-SPPL3 35 11 chr2:210595582:+ chr12:120810886:- FRAMESHIFT NA TCGA-CD-8526-01A-11R-2343-13 SPPL3-CPS1 33 14 chr12:120903845:- chr2:210556719:+ FRAMESHIFT NA TCGA-CD-8526-01A-11R-2343-13 POLK-ANKDD1B 13 4 chr5:75552591:+ chr5:75653142:+ INFRAME NA TCGA-CD-8528-01A-11R-2343-13 PVT1-QRSL1 3738 14741 chr8:127794734:+ chr6:106662980:+ . NA TCGA-CD-8528-01A-11R-2343-13 QRSL1-CD24 3249 1981 chr6:106629705:+ chr6:106971834:- INFRAME NA TCGA-CD-8528-01A-11R-2343-13 MIR1204-QRSL1 3128 2123 chr8:127796008:+ chr6:106662980:+ . NA TCGA-CD-8528-01A-11R-2343-13 UBE2Q2P2-WDR72 298 10 chr15:82355374:+ chr15:53733161:- . NA TCGA-CD-8528-01A-11R-2343-13 ATG5-CASC8 146 99 chr6:106201972:- chr8:127323154:- . NA TCGA-CD-8528-01A-11R-2343-13 OCLN-ARHGAP26 75 28 chr5:69514109:+ chr5:143014080:+ INFRAME NA TCGA-CD-8528-01A-11R-2343-13 SLTM-EPB42 18 20 chr15:58932356:- chr15:43131142:- . NA TCGA-CD-8528-01A-11R-2343-13 EFL1-GLDN 16 7 chr15:82130377:- chr15:51394835:+ FRAMESHIFT NA TCGA-CD-8528-01A-11R-2343-13 ARHGAP26-CAST 16 6 chr5:142932125:+ chr5:96675539:+ INFRAME NA TCGA-CD-8528-01A-11R-2343-13 IGF1R-EFL1 5 7 chr15:98708107:+ chr15:82163984:- INFRAME NA TCGA-CD-8529-01A-11R-2343-13 GART-IGHG2 200 98 chr21:33517489:- chr14:105644789:- INFRAME NA TCGA-CD-8529-01A-11R-2343-13 KLC1-APOPT1 29 11 chr14:103629494:+ chr14:103590181:+ . NA TCGA-CD-8529-01A-11R-2343-13 KIAA1671-HTR1E 23 2 chr22:25181823:+ chr6:87015150:+ . NA TCGA-CD-8529-01A-11R-2343-13 PVT1-QRSL1 16 9 chr8:127794734:+ chr6:106662980:+ . NA TCGA-CD-8529-01A-11R-2343-13 PPFIA1-FADD 13 2 chr11:70272436:+ chr11:70206133:+ FRAMESHIFT NA TCGA-CD-8529-01A-11R-2343-13 PCBP4-RPL29 9 14 chr3:51967326:- chr3:51995902:- . NA TCGA-CD-8529-01A-11R-2343-13 SMG1-MYH11 3 1 chr16:18877131:- chr16:15838269:- . NA TCGA-CD-8530-01A-11R-2343-13 MAP4K5-NIN 10 0 chr14:50504800:- chr14:50743529:- FRAMESHIFT NA TCGA-CD-8531-01A-11R-2343-13 HIST1H4I-BCL6 195 6 chr6:27139330:+ chr3:187734907:- . Likely Oncogenic NA TCGA-CD-8531-01A-11R-2343-13 FCHSD2-ZNF705E 23 5 chr11:73140031:- chr11:71821547:- . NA TCGA-CD-8531-01A-11R-2343-13 DIP2B-PRELID1 13 0 chr12:50505024:+ chr5:177303832:+ . NA TCGA-CD-8532-01A-11R-2343-13 RAP1A-ABCD3 9 5 chr1:111619934:+ chr1:94458607:+ . NA TCGA-CD-8535-01A-11R-2343-13 RNF168-SMCO1 154 65 chr3:196502873:- chr3:196508331:- FRAMESHIFT NA TCGA-CD-8535-01A-11R-2343-13 SLC12A2-PDHA1 37 20 chr5:128084710:+ chrX:19349312:+ INFRAME NA TCGA-CD-8535-01A-11R-2343-13 OSBPL5-MRGPRE 35 16 chr11:3119547:- chr11:3228860:- . NA TCGA-CD-8535-01A-11R-2343-13 CLTA-RIN2 28 38 chr9:36205692:+ chr20:20000747:+ . NA TCGA-CD-8535-01A-11R-2343-13 KMT2E-KANSL1 35 7 chr7:105041023:+ chr17:46172232:- . NA TCGA-CD-8535-01A-11R-2343-13 CCNB2-RNF111 26 19 chr15:59117368:+ chr15:59094783:+ FRAMESHIFT NA TCGA-CD-8535-01A-11R-2343-13 FAM131A-HTR3D 16 14 chr3:184337371:+ chr3:184035057:+ . NA TCGA-CD-8535-01A-11R-2343-13 CDC5L-HSP90AB1 11 6 chr6:44408632:+ chr6:44248630:+ INFRAME NA TCGA-CD-8535-01A-11R-2343-13 TCF19-PSORS1C1 10 8 chr6:31159707:+ chr6:31139641:+ FRAMESHIFT NA TCGA-CD-8535-01A-11R-2343-13 KMT2E-MAPT 10 4 chr7:105066807:+ chr17:45962321:+ . NA TCGA-CD-8535-01A-11R-2343-13 CASZ1-C1orf127 10 2 chr1:10796564:- chr1:10970068:- . NA TCGA-CD-8536-01A-11R-2343-13 ATP8A1-PDS5A 21 14 chr4:42549013:- chr4:39863459:- INFRAME NA TCGA-CD-A487-01A-21R-A24K-31 CNOT1-PRRX2 49 19 chr16:58585338:- chr9:129719231:+ FRAMESHIFT NA TCGA-CD-A487-01A-21R-A24K-31 RNF20-PLPPR1 17 0 chr9:101535552:+ chr9:101269880:+ INFRAME NA TCGA-CD-A487-01A-21R-A24K-31 INTS12-PPA2 15 0 chr4:105708638:- chr4:105456745:- . NA TCGA-CD-A487-01A-21R-A24K-31 RNF169-POLD3 12 3 chr11:74817714:+ chr11:74668777:+ FRAMESHIFT NA TCGA-CD-A487-01A-21R-A24K-31 SLC7A6-TANGO6 9 6 chr16:68275249:+ chr16:68974028:+ INFRAME NA TCGA-CD-A487-01A-21R-A24K-31 ZBTB8OS-SYNC 7 4 chr1:32650433:- chr1:32684382:- INFRAME NA TCGA-CD-A487-01A-21R-A24K-31 USP31-GGA2 6 5 chr16:23072045:- chr16:23488709:- INFRAME NA TCGA-CD-A489-01A-11R-A24K-31 DGCR2-CLTCL1 8 1 chr22:19056986:- chr22:19275830:- FRAMESHIFT NA TCGA-CD-A48A-01A-12R-A36D-31 RBBP8-DSCAS 16 6 chr18:23006432:+ chr18:31103123:+ . NA TCGA-CD-A48A-01A-12R-A36D-31 FAM193A-HTT 13 3 chr4:2700544:+ chr4:3188951:+ FRAMESHIFT NA TCGA-CG-4437-01A-01R-1802-13 ANXA2-SLC51A 99 0 chr15:60360941:- chr3:196232419:+ INFRAME NA TCGA-CG-4437-01A-01R-1802-13 CDKL5-SUV39H1 10 0 chrX:18425695:+ chrX:48706265:+ . NA TCGA-CG-4441-01A-01R-1802-13 CDK19-AMD1 166 8 chr6:110746126:- chr6:110888857:+ INFRAME NA TCGA-CG-4441-01A-01R-1802-13 PRRC2B-POMT1 35 1 chr9:131394263:+ chr9:131506403:+ . NA TCGA-CG-4441-01A-01R-1802-13 SLC30A5-MRPS36 25 0 chr5:69115407:+ chr5:69226338:+ INFRAME NA TCGA-CG-4441-01A-01R-1802-13 KIAA0232-TBC1D14 18 0 chr4:6842204:+ chr4:6994184:+ INFRAME NA TCGA-CG-4441-01A-01R-1802-13 MICU1-DNAJB12 16 0 chr10:72626010:- chr10:72345127:- . NA TCGA-CG-4441-01A-01R-1802-13 FAM53B-NKX1-2 12 0 chr10:124681607:- chr10:124448147:- FRAMESHIFT NA TCGA-CG-5717-01A-11R-1602-13 TOB2-MKL1 23 1 chr22:41446379:- chr22:40411907:- . NA TCGA-CG-5718-01A-11R-1602-13 EIF2S3-PRDX4 34 0 chrX:24060182:+ chrX:23686285:+ INFRAME NA TCGA-CG-5718-01A-11R-1602-13 MGAT5-GPR39 15 1 chr2:134428439:+ chr2:132645101:+ FRAMESHIFT NA TCGA-CG-5718-01A-11R-1602-13 SGSM2-PTK6 10 2 chr17:2337745:+ chr20:63533704:- INFRAME NA TCGA-CG-5718-01A-11R-1602-13 SSH2-PIPOX 9 2 chr17:29929938:- chr17:28953364:+ . NA TCGA-CG-5719-01A-11R-1602-13 FAM3D-EFHD2 46 4 chr3:58666576:- chr1:15425871:+ . NA TCGA-CG-5724-01A-11R-1602-13 OXR1-CASC8 92 1 chr8:106448048:+ chr8:127290060:- . NA TCGA-CG-5732-01A-11R-1602-13 OCLN-RAD17 12 3 chr5:69504294:+ chr5:69414031:+ INFRAME NA TCGA-CG-5732-01A-11R-1602-13 ZHX3-VSTM2L 9 3 chr20:41238688:- chr20:37931635:+ . NA TCGA-D7-6518-01A-11R-1802-13 RAB20-MYO16 26 1 chr13:110561348:- chr13:108957688:+ FRAMESHIFT NA TCGA-D7-6519-01A-11R-1802-13 F11R-NECTIN4 40 4 chr1:161021010:- chr1:161079949:- INFRAME NA TCGA-D7-6520-01A-11R-1802-13 TULP4-WDR27 42 0 chr6:158461729:+ chr6:169457634:- INFRAME NA TCGA-D7-6521-01A-11R-1802-13 PHF14-MEOX2 31 5 chr7:10990847:+ chr7:15612611:- FRAMESHIFT NA TCGA-D7-6526-01A-11R-1802-13 CSNK1E-FAM227A 31 0 chr22:38314082:- chr22:38586199:- FRAMESHIFT NA TCGA-D7-6526-01A-11R-1802-13 CRCP-RELN 16 0 chr7:66152474:+ chr7:103523531:- . NA TCGA-D7-6527-01A-11R-1802-13 PUM1-NKAIN1 181 10 chr1:30974651:- chr1:31188187:- INFRAME NA TCGA-D7-6527-01A-11R-1802-13 PDCD6IP-GADL1 111 2 chr3:33828969:+ chr3:30728415:- INFRAME NA TCGA-D7-6527-01A-11R-1802-13 ZNF257-ARIH2 110 0 chr19:22052635:+ chr3:48979482:+ FRAMESHIFT NA TCGA-D7-6527-01A-11R-1802-13 CLK1-ORC2 92 0 chr2:200864564:- chr2:200913992:- . NA TCGA-D7-6527-01A-11R-1802-13 POLR2J-DNAJC2 80 1 chr7:102478811:- chr7:103324562:- INFRAME NA TCGA-D7-6527-01A-11R-1802-13 UBP1-EIF3K 45 3 chr3:33439736:- chr19:38620337:+ INFRAME NA TCGA-D7-6527-01A-11R-1802-13 TAF15-PDK3 41 0 chr17:35809576:+ chrX:24531657:+ FRAMESHIFT NA TCGA-D7-6527-01A-11R-1802-13 PPARGC1B-TCOF1 35 4 chr5:149730420:+ chr5:150361156:+ INFRAME NA TCGA-D7-6527-01A-11R-1802-13 PAF1-YWHAG 31 0 chr19:39390069:- chr7:76358824:- . NA TCGA-D7-6527-01A-11R-1802-13 NCAPG2-ORC5 23 0 chr7:158704724:- chr7:104136893:- . NA TCGA-D7-6527-01A-11R-1802-13 PTPRN2-DNAJC2 22 3 chr7:158587558:- chr7:103313101:- INFRAME NA TCGA-D7-6527-01A-11R-1802-13 DNAJC2-ZNF385D 20 1 chr7:103337736:- chr3:21665028:- INFRAME NA TCGA-D7-6527-01A-11R-1802-13 MYRIP-BABAM1 18 0 chr3:39809916:+ chr19:17273904:+ . NA TCGA-D7-6527-01A-11R-1802-13 SNX6-BAZ1A 18 0 chr14:34593045:- chr14:34774490:- INFRAME NA TCGA-D7-6527-01A-11R-1802-13 CSNK1A1-MYO15B 17 0 chr5:149550075:- chr17:75610166:+ INFRAME NA TCGA-D7-6527-01A-11R-1802-13 PNPLA7-EXD3 16 0 chr9:137497187:- chr9:137324143:- INFRAME NA TCGA-D7-6528-01A-11R-1802-13 PARD3-ARHGAP12 29 1 chr10:34814876:- chr10:31843586:- INFRAME NA TCGA-D7-6815-01A-11R-1884-13 ZKSCAN4-SLC44A4 133 8 chr6:28248067:- chr6:31866126:- INFRAME NA TCGA-D7-6815-01A-11R-1884-13 LASP1-WIPF2 22 2 chr17:38898519:+ chr17:40256391:+ . NA TCGA-D7-6815-01A-11R-1884-13 AATF-UBE2G1 19 0 chr17:36953907:+ chr17:4307123:- INFRAME NA TCGA-D7-6817-01A-11R-1884-13 KIAA0753-CCDC92B 14 0 chr17:6620788:- chr17:2725000:- . NA TCGA-D7-6818-01A-11R-1884-13 PTOV1-CA10 90 4 chr19:49858653:+ chr17:51747818:- INFRAME NA TCGA-D7-6818-01A-11R-1884-13 IGKV1OR10-1-IGKJ4 67 0 chr10:42185790:+ chr2:88860921:- . NA TCGA-D7-6818-01A-11R-1884-13 PSMD13-OR4G4P 44 1 chr11:247448:+ chr1:53282:+ . NA TCGA-D7-6818-01A-11R-1884-13 AGAP1-NAA35 36 0 chr2:235750488:+ chr9:85996399:+ INFRAME NA TCGA-D7-6820-01A-11R-1884-13 CDC42EP4-AMZ2 222 20 chr17:73311893:- chr17:68248640:+ . NA TCGA-D7-6822-01A-11R-1884-13 PUM1-KANSL1 91 0 chr1:31059204:- chr17:46067667:- INFRAME NA TCGA-D7-6822-01A-11R-1884-13 SKI-FAF1 40 0 chr1:2229735:+ chr1:50801677:- INFRAME NA TCGA-D7-6822-01A-11R-1884-13 FAF1-SKI 27 0 chr1:50959767:- chr1:2302978:+ INFRAME NA TCGA-D7-8570-01A-11R-2343-13 RNF111-CCNB2 59 22 chr15:58988068:+ chr15:59123517:+ . NA TCGA-D7-8573-01A-11R-2343-13 WIPF2-THRA 40 22 chr17:40219492:+ chr17:40074192:+ . NA TCGA-D7-8573-01A-11R-2343-13 ERBB2-WIPF2 25 21 chr17:39717480:+ chr17:40256391:+ . NA TCGA-D7-8573-01A-11R-2343-13 PGAP3-PPP1R1B 24 25 chr17:39674617:- chr17:39627306:+ . NA TCGA-D7-8573-01A-11R-2343-13 ERBB2-IKZF3 3 5 chr17:39730263:+ chr17:39792933:- . NA TCGA-D7-8575-01A-11R-2343-13 ABHD17C-BHLHE41 17 14 chr15:80696019:+ chr12:26124582:- INFRAME NA TCGA-D7-8575-01A-11R-2343-13 NF2-CABP7 13 15 chr22:29604112:+ chr22:29729055:+ INFRAME Likely Oncogenic NA TCGA-D7-8576-01A-11R-2343-13 ELF1-DCLK1 15 16 chr13:41019228:- chr13:36126156:- . NA TCGA-D7-8576-01A-11R-2343-13 ELF1-MTIF3 17 5 chr13:41060838:- chr13:27445156:- . NA TCGA-D7-8576-01A-11R-2343-13 CLDN18-ARHGAP26 16 7 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-D7-8576-01A-11R-2343-13 CDK8-GTF2F2 12 5 chr13:26337642:+ chr13:45283442:+ INFRAME NA TCGA-D7-8576-01A-11R-2343-13 ARHGEF18-INSR 1 1 chr19:7395247:+ chr19:7267896:- . NA TCGA-D7-8578-01A-21R-2343-13 TM9SF2-IL17D 17 2 chr13:99554455:+ chr13:20721636:+ INFRAME NA TCGA-D7-8578-01A-21R-2343-13 TM9SF2-DCUN1D2-AS 6 8 chr13:99554455:+ chr13:113475860:+ . NA TCGA-D7-8579-01A-11R-2343-13 TMPRSS4-TMEM25 50 27 chr11:118104820:+ chr11:118533857:+ FRAMESHIFT NA TCGA-D7-8579-01A-11R-2343-13 PTPRN2-IMMP2L 19 10 chr7:158587558:- chr7:111521449:- . NA TCGA-D7-8579-01A-11R-2343-13 CLDN18-ARHGAP26 19 2 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-D7-8579-01A-11R-2343-13 VMP1-TBX4 17 5 chr17:59738947:+ chr17:61456488:+ . NA TCGA-D7-8579-01A-11R-2343-13 NUP153-ZNF280D 9 8 chr6:17706277:- chr15:56693215:- INFRAME NA TCGA-D7-A4YU-01A-21R-A251-31 DIS3L2-EFHD1 22 9 chr2:232210405:+ chr2:232681585:+ FRAMESHIFT NA TCGA-D7-A4YU-01A-21R-A251-31 SEMA3B-ALS2CR12 22 7 chr3:50271480:+ chr2:201289785:- FRAMESHIFT NA TCGA-D7-A4YY-01A-11R-A251-31 GABRP-RANBP17 346 112 chr5:170789247:+ chr5:170953597:+ INFRAME NA TCGA-D7-A4YY-01A-11R-A251-31 ITGA6-RAPGEF4 321 154 chr2:172491523:+ chr2:173033914:+ INFRAME NA TCGA-D7-A4YY-01A-11R-A251-31 AP1M2-FBXL12 62 30 chr19:10578892:- chr19:9811717:- INFRAME NA TCGA-D7-A4YY-01A-11R-A251-31 PRIM2-COL22A1 20 10 chr6:57326045:+ chr8:138737577:- INFRAME NA TCGA-D7-A4YY-01A-11R-A251-31 DENND5B-FAM60A 21 4 chr12:31590706:- chr12:31298224:- . NA TCGA-D7-A4YY-01A-11R-A251-31 XRCC6-SREBF2 15 7 chr22:41637791:+ chr22:41866831:+ FRAMESHIFT NA TCGA-D7-A4YY-01A-11R-A251-31 ZNF148-OSBPL11 11 4 chr3:125375102:- chr3:125552679:- . NA TCGA-D7-A4Z0-01A-22R-A251-31 CLDN18-ARHGAP6 36 9 chr3:138031105:+ chrX:11254707:- INFRAME NA TCGA-D7-A6EV-01A-11R-A31P-31 TUBB6-OSBPL1A 34 7 chr18:12308795:+ chr18:24181279:- FRAMESHIFT NA TCGA-D7-A6EX-01A-11R-A31P-31 HDAC8-RPS4X 37 8 chrX:72462004:- chrX:72256054:- . NA TCGA-D7-A6EX-01A-11R-A31P-31 CDK6-SEMA3D 16 1 chr7:92774696:- chr7:85055859:- FRAMESHIFT NA TCGA-D7-A6EX-01A-11R-A31P-31 PCLO-CDK14 12 2 chr7:82965771:- chr7:90747681:+ INFRAME NA TCGA-D7-A6EX-01A-11R-A31P-31 BCKDHB-COQ3 4 6 chr6:80171390:+ chr6:99383824:- INFRAME NA TCGA-D7-A6EY-01A-21R-A31P-31 OPLAH-EEF1D 28 12 chr8:144055029:- chr8:143590081:- INFRAME NA TCGA-D7-A6EY-01A-21R-A31P-31 RHOA-PFKFB4 12 0 chr3:49411820:- chr3:48550234:- . NA TCGA-D7-A6EY-01A-21R-A31P-31 SH3GL1-DOHH 11 4 chr19:4400324:- chr19:3496886:- . NA TCGA-D7-A6EY-01A-21R-A31P-31 LAMA3-MIB1 8 2 chr18:23689977:+ chr18:21853140:+ INFRAME NA TCGA-D7-A6EZ-01A-11R-A31P-31 CIRBP-ERAS 180 40 chr19:1269410:+ chrX:48829081:+ . NA TCGA-D7-A6EZ-01A-11R-A31P-31 TSPAN14-IFIT1 21 15 chr10:80468687:+ chr10:89402281:+ . NA TCGA-D7-A6EZ-01A-11R-A31P-31 FAAHP1-RNF11 12 1 chr1:46443037:+ chr1:51269956:+ . NA TCGA-D7-A6F0-01A-11R-A31P-31 ENSA-CTSS 45 2 chr1:150627467:- chr1:150755150:- INFRAME NA TCGA-D7-A6F0-01A-11R-A31P-31 CRADD-MRPL42 27 9 chr12:93679072:+ chr12:93501176:+ FRAMESHIFT NA TCGA-D7-A6F0-01A-11R-A31P-31 PPP6R3-RHOD 24 20 chr11:68505271:+ chr11:67065896:+ . NA TCGA-D7-A6F0-01A-11R-A31P-31 MAP4K3-CDKL4 25 4 chr2:39378066:- chr2:39213472:- FRAMESHIFT NA TCGA-D7-A6F0-01A-11R-A31P-31 USP39-ELMOD3 17 0 chr2:85625691:+ chr2:85387098:+ INFRAME NA TCGA-D7-A6F0-01A-11R-A31P-31 SPINT2-ZNF607 13 5 chr19:38283797:+ chr19:37711692:- . NA TCGA-D7-A6F2-01A-12R-A31P-31 RAB3IP-BEST3 12 7 chr12:69801721:+ chr12:69699349:- . NA TCGA-D7-A748-01A-12R-A32D-31 PIGS-PPP1R27 20 6 chr17:28554851:- chr17:81834833:- INFRAME NA TCGA-EQ-8122-01A-11R-2343-13 CDC6-JUP 1163 1331 chr17:40303827:+ chr17:41757805:- . NA TCGA-EQ-8122-01A-11R-2343-13 PRR11-SKA2 41 0 chr17:59155805:+ chr17:59131367:- . NA TCGA-EQ-8122-01A-11R-2343-13 STARD3-MIEN1 37 14 chr17:39653750:+ chr17:39730291:- FRAMESHIFT NA TCGA-EQ-8122-01A-11R-2343-13 RAPGEFL1-GSDMA 33 16 chr17:40177109:+ chr17:39966311:+ FRAMESHIFT NA TCGA-EQ-8122-01A-11R-2343-13 PSMD3-CASC3 24 9 chr17:39990197:+ chr17:40161753:+ INFRAME NA TCGA-EQ-8122-01A-11R-2343-13 EHBP1-CTNND2 20 3 chr2:62707295:+ chr5:11732272:- FRAMESHIFT NA TCGA-EQ-8122-01A-11R-2343-13 HAP1-WIPF2 18 10 chr17:41731493:- chr17:40283272:+ . NA TCGA-EQ-8122-01A-11R-2343-13 HAP1-CDC6 12 10 chr17:41731493:- chr17:40289408:+ . NA TCGA-EQ-8122-01A-11R-2343-13 CDC6-CCR7 7 7 chr17:40295456:+ chr17:40558942:- FRAMESHIFT NA TCGA-EQ-A4SO-01A-11R-A251-31 APC-DTWD2 22 1 chr5:112828972:+ chr5:118848218:- INFRAME Likely Oncogenic NA TCGA-F1-6875-01A-11R-2055-13 TNPO2-HOOK2 11 5 chr19:12723249:- chr19:12774897:- . NA TCGA-F1-A72C-01A-21R-A33Y-31 MACF1-FOXJ3 62 18 chr1:39444835:+ chr1:42199230:- INFRAME NA TCGA-F1-A72C-01A-21R-A33Y-31 VTI1A-TCF7L2 2 0 chr10:112538330:+ chr10:113141184:+ FRAMESHIFT Likely Oncogenic NA TCGA-FP-7829-01A-11R-2055-13 TET3-ANXA4 17 3 chr2:74003166:+ chr2:69781520:+ . NA TCGA-FP-7829-01A-11R-2055-13 SH3PXD2A-HNF4A 17 1 chr10:103855195:- chr20:44424018:+ FRAMESHIFT NA TCGA-FP-7829-01A-11R-2055-13 LYPD6-LY75 6 2 chr2:149437826:+ chr2:159899059:- INFRAME NA TCGA-FP-7829-01A-11R-2055-13 EYA3-TMEM61 5 4 chr1:28088524:- chr1:54991836:+ . NA TCGA-FP-7829-01A-11R-2055-13 TMEM107-FXR2 6 0 chr17:8176200:- chr17:7606149:- INFRAME NA TCGA-FP-7916-01A-11R-2203-13 TMSB4X-IGHM 18 0 chrX:12975168:+ chr14:105856217:- . NA TCGA-FP-7916-01A-11R-2203-13 TNRC18-MYL4 10 4 chr7:5351819:- chr17:47213799:+ FRAMESHIFT NA TCGA-FP-7916-01A-11R-2203-13 HECTD4-RPH3A 5 8 chr12:112381952:- chr12:112792143:+ . NA TCGA-FP-8099-01A-11R-2343-13 HOOK3-GTF2E2 15 14 chr8:42943445:+ chr8:30635123:- INFRAME NA TCGA-FP-8099-01A-11R-2343-13 CREB3L1-ATG13 11 9 chr11:46278213:+ chr11:46630045:+ . NA TCGA-FP-8631-01A-11R-2402-13 UBE2R2-ACO1 38 27 chr9:33817934:+ chr9:32440465:+ INFRAME NA TCGA-FP-8631-01A-11R-2402-13 HNRNPH3-SLC29A3 35 27 chr10:68339555:+ chr10:71361954:+ FRAMESHIFT NA TCGA-FP-8631-01A-11R-2402-13 PITPNA-LLGL2 23 11 chr17:1548296:- chr17:75568476:+ INFRAME NA TCGA-FP-8631-01A-11R-2402-13 SNX9-ZDHHC14 19 11 chr6:157896998:+ chr6:157592988:+ INFRAME NA TCGA-FP-8631-01A-11R-2402-13 DZIP1L-NME9 16 7 chr3:138086961:- chr3:138303643:- INFRAME NA TCGA-FP-8631-01A-11R-2402-13 CCAR1-MCU 10 27 chr10:68754827:+ chr10:72834359:+ INFRAME NA TCGA-FP-8631-01A-11R-2402-13 STAG3L5P-AP4M1 6 14 chr7:100338889:+ chr7:100105240:+ . NA TCGA-FP-8631-01A-11R-2402-13 ZNRF2-ARMC10 7 9 chr7:30323737:+ chr7:103083682:+ INFRAME NA TCGA-FP-8631-01A-11R-2402-13 CTPS1-NFYC 7 6 chr1:41008714:+ chr1:40747534:+ INFRAME NA TCGA-FP-8631-01A-11R-2402-13 NFIX-VDR 6 7 chr19:13025552:+ chr12:47879115:- INFRAME NA TCGA-FP-8631-01A-11R-2402-13 CDC27-SYT13 4 13 chr17:47189146:- chr11:45255891:- INFRAME NA TCGA-FP-8631-01A-11R-2402-13 SLC9A8-PTGIS 6 3 chr20:49823141:+ chr20:49508064:- FRAMESHIFT NA TCGA-FP-8631-01A-11R-2402-13 VPS13D-MFN2 5 6 chr1:12335827:+ chr1:12006538:+ FRAMESHIFT NA TCGA-FP-8631-01A-11R-2402-13 BMT2-ADAMTS14 6 1 chr7:112939591:- chr10:70729294:+ FRAMESHIFT NA TCGA-FP-8631-01A-11R-2402-13 ITPR3-SYNGAP1 4 7 chr6:33678802:+ chr6:33423477:+ FRAMESHIFT NA TCGA-FP-8631-01A-11R-2402-13 RAP1B-CSAD 2 11 chr12:68611052:+ chr12:53161389:- . NA TCGA-FP-8631-01A-11R-2402-13 SBNO2-GAMT 4 3 chr19:1154184:- chr19:1397499:- INFRAME NA TCGA-FP-8631-01A-11R-2402-13 NADK-TOM1L2 3 6 chr1:1779905:- chr17:17862848:- . NA TCGA-FP-8631-01A-11R-2402-13 VPS13C-HERC1 3 5 chr15:61940647:- chr15:63612556:- INFRAME NA TCGA-FP-8631-01A-11R-2402-13 ABR-YWHAE 3 1 chr17:1228793:- chr17:1365058:- . NA TCGA-FP-A8CX-01A-11R-A36D-31 ZFP91-RPL5P29 53 18 chr11:58617568:+ chr11:56358028:+ . NA TCGA-FP-A8CX-01A-11R-A36D-31 RAVER1-TMEM259 35 14 chr19:10328642:- chr19:1014473:- INFRAME NA TCGA-FP-A8CX-01A-11R-A36D-31 MED24-TBC1D3K 35 0 chr17:40053298:- chr17:37925999:+ . NA TCGA-FP-A8CX-01A-11R-A36D-31 CPSF6-CLDN11 27 6 chr12:69239706:+ chr3:170460299:+ . NA TCGA-FP-A8CX-01A-11R-A36D-31 CLDN11-MECOM 18 7 chr3:170476873:+ chr3:169381524:- . NA TCGA-FP-A8CX-01A-11R-A36D-31 LRRIQ4-MIEN1 18 5 chr3:169822941:+ chr17:39730291:- FRAMESHIFT NA TCGA-FP-A8CX-01A-11R-A36D-31 PRKCI-CLDN11 11 7 chr3:170222770:+ chr3:170476771:+ . NA TCGA-FP-A8CX-01A-11R-A36D-31 GPR160-MED24 6 7 chr3:170039043:+ chr17:40053635:- . NA TCGA-FP-A9TM-01A-11R-A39E-31 CCSER2-RGR 10 2 chr10:84328808:+ chr10:84247641:+ . NA TCGA-HF-7132-01A-11R-2055-13 EPB41L1-CNBD2 15 15 chr20:36112480:+ chr20:35995038:+ . NA TCGA-HF-7132-01A-11R-2055-13 MFHAS1-ZFAT 14 7 chr8:8890061:- chr8:134532972:- FRAMESHIFT NA TCGA-HF-7132-01A-11R-2055-13 GP2-LYZ 10 20 chr16:20311148:- chr12:69353773:+ . NA TCGA-HF-7133-01A-11R-2055-13 EDC3-CYP1A1 11 2 chr15:74655733:- chr15:74723126:- . NA TCGA-HF-7133-01A-11R-2055-13 PCF11-DDIAS 10 1 chr11:83171914:+ chr11:82930157:+ FRAMESHIFT NA TCGA-HF-7136-01A-11R-2055-13 SMCHD1-DLGAP1 47 7 chr18:2674145:+ chr18:3742512:- INFRAME NA TCGA-HF-7136-01A-11R-2055-13 ARHGAP35-BAIAP2 29 4 chr19:46937408:+ chr17:81053668:+ FRAMESHIFT NA TCGA-HF-A5NB-01A-11R-A31P-31 ZFYVE28-POLN 62 19 chr4:2353933:- chr4:2073029:- FRAMESHIFT NA TCGA-HF-A5NB-01A-11R-A31P-31 SDC1-PUM2 31 5 chr2:20203087:- chr2:20263460:- INFRAME NA TCGA-HF-A5NB-01A-11R-A31P-31 SCAMP1-ARSB 21 4 chr5:78450034:+ chr5:78839426:- INFRAME NA TCGA-HU-8249-01A-11R-A36D-31 EPS8-A2M 13 1 chr12:15789161:- chr12:9072871:- . NA TCGA-HU-8608-01A-11R-2402-13 TGM2-COL4A1 1 9 chr20:38142064:- chr13:110150444:- INFRAME NA TCGA-HU-8610-01A-22R-2402-13 CLK2-PPP1R12B 9 9 chr1:155273201:- chr1:202488533:+ . NA TCGA-HU-A4G3-01A-11R-A24K-31 LLGL2-ITGB4 50 9 chr17:75533705:+ chr17:75752174:+ . NA TCGA-HU-A4G3-01A-11R-A24K-31 PIP5K1B-TJP2 17 4 chr9:68742657:+ chr9:69212548:+ . NA TCGA-HU-A4G3-01A-11R-A24K-31 CCDC57-FASN 14 2 chr17:82201538:- chr17:82096452:- . NA TCGA-HU-A4G6-01A-11R-A24K-31 CASC3-WIPF2 15 5 chr17:40141607:+ chr17:40256391:+ . NA TCGA-HU-A4GF-01A-11R-A24K-31 MTUS1-ASAH1 57 23 chr8:17743604:- chr8:18063230:- INFRAME NA TCGA-HU-A4GF-01A-11R-A24K-31 SNRNP40-MAP2K5 37 14 chr1:31289254:- chr15:67748231:+ INFRAME NA TCGA-HU-A4GF-01A-11R-A24K-31 SNRNP40-SPOCD1 37 7 chr1:31281374:- chr1:31801705:- INFRAME NA TCGA-HU-A4GF-01A-11R-A24K-31 ARHGAP8-NTF6G 36 7 chr22:44848050:+ chr19:49029817:+ . NA TCGA-HU-A4GF-01A-11R-A24K-31 NTSR1-OSBPL2 13 1 chr20:62709921:+ chr20:62279157:+ FRAMESHIFT NA TCGA-HU-A4GF-01A-11R-A24K-31 SPAST-MEMO1 8 3 chr2:32064246:+ chr2:31943383:- INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 SLC12A2-PPP2CA 209 28 chr5:128084710:+ chr5:134202021:- INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 BACE2-MX1 136 33 chr21:41237729:+ chr21:41435837:+ INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 FAM120A-WNK2 92 13 chr9:93498886:+ chr9:93268627:+ INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 BRD4-ZC3H15 88 22 chr19:15332290:- chr2:186502496:+ . Oncogenic NA TCGA-HU-A4GH-01A-11R-A24K-31 ARID1A-RPS6KA1 83 28 chr1:26775707:+ chr1:26571449:+ INFRAME Likely Oncogenic NA TCGA-HU-A4GH-01A-11R-A24K-31 ABCC3-XYLT2 49 10 chr17:50678219:+ chr17:50358207:+ INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 DUS1L-ASPSCR1 39 17 chr17:82063468:- chr17:81985507:+ FRAMESHIFT NA TCGA-HU-A4GH-01A-11R-A24K-31 SETD5-SRGAP3 36 10 chr3:9429009:+ chr3:9064581:- FRAMESHIFT NA TCGA-HU-A4GH-01A-11R-A24K-31 LRP5-CHRM1 32 13 chr11:68414012:+ chr11:62911178:- . NA TCGA-HU-A4GH-01A-11R-A24K-31 ATP2B4-CCNI 33 6 chr1:203627219:+ chr4:77066405:- . NA TCGA-HU-A4GH-01A-11R-A24K-31 LRP5-SLC22A6 22 4 chr11:68414012:+ chr11:62936486:- . NA TCGA-HU-A4GH-01A-11R-A24K-31 POLDIP3-ARFGAP3 20 5 chr22:42587506:- chr22:42808890:- INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 CP-COMMD2 18 4 chr3:149177840:- chr3:149741718:- INFRAME NA TCGA-HU-A4GH-01A-11R-A24K-31 PSMD11-RHOT1 16 3 chr17:32444614:+ chr17:32253085:+ FRAMESHIFT NA TCGA-HU-A4GH-01A-11R-A24K-31 DYM-MYO5B 15 3 chr18:49460398:- chr18:50055378:- . NA TCGA-HU-A4GH-01A-11R-A24K-31 LUC7L3-SPATA20 15 3 chr17:50719831:+ chr17:50554251:+ FRAMESHIFT NA TCGA-HU-A4GH-01A-11R-A24K-31 B4GALT1-RAF1 15 1 chr9:33166758:- chr3:12600415:- FRAMESHIFT Likely Oncogenic NA TCGA-HU-A4GT-01A-21R-A251-31 TSSC1-SH3YL1 12 4 chr2:3214149:- chr2:234272:- INFRAME NA TCGA-HU-A4GU-01A-11R-A251-31 ROCK2-ASAP2 27 5 chr2:11198491:- chr2:9279317:+ INFRAME NA TCGA-HU-A4GU-01A-11R-A251-31 RACGAP1-FAIM2 7 5 chr12:50025398:- chr12:49903982:- . NA TCGA-HU-A4H0-01A-11R-A251-31 MTG1-ADGRA1 25 2 chr10:133402773:+ chr10:133127233:+ INFRAME NA TCGA-HU-A4H0-01A-11R-A251-31 MFSD6-INPP1 13 3 chr2:190469855:+ chr2:190370905:+ FRAMESHIFT NA TCGA-HU-A4H5-01A-21R-A251-31 ABHD12-ERVFRD-1 49 10 chr20:25390513:- chr6:11103762:- FRAMESHIFT NA TCGA-HU-A4H5-01A-21R-A251-31 MYH14-NR1H2 41 6 chr19:50217771:+ chr19:50338002:+ . NA TCGA-HU-A4H5-01A-21R-A251-31 APPL2-KCCAT198 10 5 chr12:105203703:- chr12:105326976:- . NA TCGA-HU-A4HD-01A-11R-A251-31 GRB7-PECAM1 436 212 chr17:39738133:+ chr17:64323845:- . NA TCGA-HU-A4HD-01A-11R-A251-31 CLDN7-UTS2R 221 40 chr17:7260821:- chr17:82374243:+ . NA TCGA-HU-A4HD-01A-11R-A251-31 SDC4-TP53TG5 181 93 chr20:45348325:- chr20:45377613:- INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 TEX2-STARD3 96 28 chr17:64193559:- chr17:39657008:+ FRAMESHIFT NA TCGA-HU-A4HD-01A-11R-A251-31 HSPG2-MYBPHL 92 8 chr1:21895922:- chr1:109294249:- INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 EIF4G3-C7orf50 89 18 chr1:21050866:- chr7:1010143:- INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 PRKD2-MYH14 80 15 chr19:46704169:- chr19:50244242:+ INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 RHPN2-ZNF677 62 9 chr19:33044249:- chr19:53243897:- FRAMESHIFT NA TCGA-HU-A4HD-01A-11R-A251-31 PADI2-EXD3 52 18 chr1:17095909:- chr9:137324143:- INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 GPATCH1-FCGRT 51 16 chr19:33119117:+ chr19:49524507:+ INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 CCDC82-MTMR2 30 9 chr11:96371013:- chr11:95850749:- INFRAME NA TCGA-HU-A4HD-01A-11R-A251-31 ZC3H12C-SIDT2 23 8 chr11:110165677:+ chr11:117186071:+ . NA TCGA-HU-A4HD-01A-11R-A251-31 ABCC3-DHDH 16 8 chr17:50634981:+ chr19:48935000:+ INFRAME NA TCGA-IN-7806-01A-11R-2055-13 PTPRE-SH3PXD2A 12 4 chr10:127907309:+ chr10:103801362:- . NA TCGA-IN-8462-01A-11R-2343-13 MTHFS-ACAN 14 3 chr15:79889093:- chr15:88871382:+ INFRAME NA TCGA-IN-A6RI-01A-11R-A32D-31 AP1M2-CACNA1A 35 32 chr19:10583606:- chr19:13455189:- FRAMESHIFT NA TCGA-IN-A6RI-01A-11R-A32D-31 NFIX-RFX1 21 12 chr19:12995864:+ chr19:13978086:- INFRAME NA TCGA-IN-A6RI-01A-11R-A32D-31 DNM2-NFIX 17 10 chr19:10759811:+ chr19:13025021:+ FRAMESHIFT NA TCGA-IN-A6RI-01A-11R-A32D-31 DNM2-RFX1 10 9 chr19:10759811:+ chr19:13978086:- FRAMESHIFT NA TCGA-IN-A6RL-01A-11R-A32D-31 CHUK-RHOQ 11 2 chr10:100229428:- chr2:46576087:+ INFRAME NA TCGA-IN-A6RL-01A-11R-A32D-31 STAU1-PABPC1L 8 3 chr20:49174195:- chr20:44916756:+ . NA TCGA-IN-A6RN-01A-12R-A33Y-31 SPTAN1-FPGS 6 7 chr9:128552696:+ chr9:127804285:+ . NA TCGA-IN-A6RN-01A-12R-A33Y-31 AHCYL1-GSTM5 7 2 chr1:110009145:+ chr1:109714947:+ FRAMESHIFT NA TCGA-IN-A6RN-01A-12R-A33Y-31 VPS8-EPHB3 6 4 chr3:185024389:+ chr3:184575830:+ FRAMESHIFT NA TCGA-IN-A6RO-01A-12R-A33Y-31 GATAD2A-FAM134C 16 28 chr19:19406019:+ chr17:42586891:- . NA TCGA-IN-A6RO-01A-12R-A33Y-31 TAF3-KCNMA1 10 4 chr10:7824560:+ chr10:77404023:- FRAMESHIFT NA TCGA-IN-A6RS-01A-12R-A354-31 MED24-CSF3 67 32 chr17:40019579:- chr17:40017411:+ . NA TCGA-IN-A6RS-01A-12R-A354-31 TTLL5-EIF2B2 22 6 chr14:75820161:+ chr14:75007722:+ FRAMESHIFT NA TCGA-IN-A7NU-01A-22R-A354-31 LAMA3-OSBPL1A 51 22 chr18:23933935:+ chr18:24312106:- INFRAME NA TCGA-IN-AB1V-01A-21R-A414-31 PCIF1-ZSWIM1 15 4 chr20:45946083:+ chr20:45883455:+ INFRAME NA TCGA-IN-AB1X-01A-11R-A39E-31 WARS-EPB41L4B 119 22 chr14:100369087:- chr9:109217145:- FRAMESHIFT NA TCGA-IN-AB1X-01A-11R-A39E-31 SPTLC2-DIAPH3 73 28 chr14:77576767:- chr13:59774823:- INFRAME NA TCGA-IN-AB1X-01A-11R-A39E-31 PPP2R5C-FOXN3 13 12 chr14:101856885:+ chr14:89486671:- . NA TCGA-IN-AB1X-01A-11R-A39E-31 BOLA2-MUSK 15 3 chr16:29444398:- chr9:110734251:+ . NA TCGA-IN-AB1X-01A-11R-A39E-31 SMG1P6-MUSK 15 3 chr16:29444398:- chr9:110734251:+ . NA TCGA-IN-AB1X-01A-11R-A39E-31 C16orf70-CRTC3 9 7 chr16:67132911:+ chr15:90593636:+ INFRAME NA TCGA-IN-AB1X-01A-11R-A39E-31 FRK-PPP1R36 9 4 chr6:116003877:- chr14:64564751:+ FRAMESHIFT NA TCGA-IP-7968-01A-11R-2203-13 STK38L-CCDC91 94 86 chr12:27309197:+ chr12:28450161:+ INFRAME NA TCGA-IP-7968-01A-11R-2203-13 FAM60A-TM7SF3 56 149 chr12:31326024:- chr12:27003390:- . NA TCGA-IP-7968-01A-11R-2203-13 RAD51B-GPHN 42 22 chr14:67887204:+ chr14:67159415:+ INFRAME NA TCGA-IP-7968-01A-11R-2203-13 FAM60A-OVOS2 14 73 chr12:31326024:- chr12:31116469:- . NA TCGA-IP-7968-01A-11R-2203-13 POLRMT-PALM 23 5 chr19:619958:- chr19:736019:+ FRAMESHIFT NA TCGA-IP-7968-01A-11R-2203-13 MRPS35-ETFRF1 17 20 chr12:27716458:+ chr12:25203920:+ . NA TCGA-IP-7968-01A-11R-2203-13 C2CD5-IAPP 13 13 chr12:22506711:- chr12:21373337:+ . NA TCGA-IP-7968-01A-11R-2203-13 MRPS35-PPFIBP1 9 4 chr12:27710955:+ chr12:27578152:+ . NA TCGA-IP-7968-01A-11R-2203-13 PALM-OR4G1P 8 5 chr19:748020:+ chr19:104723:+ . NA TCGA-KB-A6F7-01A-12R-A32D-31 RAP1A-AK6 38 6 chr1:111691364:+ chr5:69366595:- INFRAME NA TCGA-KB-A6F7-01A-12R-A32D-31 RAP1A-TAF9 38 6 chr1:111691364:+ chr5:69366595:- . NA TCGA-KB-A93J-01A-11R-A39E-31 USP49-GSTA1 27 15 chr6:41891794:- chr6:52803878:- . NA TCGA-KB-A93J-01A-11R-A39E-31 UBE3B-GNS 27 6 chr12:109481742:+ chr12:64729057:- . NA TCGA-KB-A93J-01A-11R-A39E-31 GNA13-TOM1 25 5 chr17:65053502:- chr22:35317877:+ FRAMESHIFT NA TCGA-KB-A93J-01A-11R-A39E-31 KIF21A-CCDC114 20 7 chr12:39330746:- chr19:48312116:- FRAMESHIFT NA TCGA-KB-A93J-01A-11R-A39E-31 FLNB-RAD18 16 2 chr3:58169793:+ chr3:8948570:- INFRAME NA TCGA-KB-A93J-01A-11R-A39E-31 TBXAS1-TOMM7 14 9 chr7:139829479:+ chr7:22818048:- FRAMESHIFT NA TCGA-KB-A93J-01A-11R-A39E-31 TOM1-GNA13 9 13 chr22:35299980:+ chr17:65018303:- FRAMESHIFT NA TCGA-KB-A93J-01A-11R-A39E-31 ASH1L-MTX1P1 9 11 chr1:155352706:- chr1:155231136:+ . NA TCGA-KB-A93J-01A-11R-A39E-31 PANK1-ABCC2 10 3 chr10:89644600:- chr10:99846961:+ FRAMESHIFT NA TCGA-MX-A663-01A-11R-A31P-31 EHBP1L1-MTCH2 8 5 chr11:65579436:+ chr11:47635571:- INFRAME NA TCGA-MX-A663-01A-11R-A31P-31 SLC38A10-OGFOD3 6 9 chr17:81251493:- chr17:82411530:- INFRAME NA TCGA-MX-A663-01A-11R-A31P-31 CDC14B-AAED1 6 5 chr9:96564777:- chr9:96651712:- INFRAME NA TCGA-MX-A666-01A-11R-A31P-31 ANKRD52-ASPHD1 76 24 chr12:56255784:- chr16:29905788:+ FRAMESHIFT NA TCGA-MX-A666-01A-11R-A31P-31 PDCD2L-CACNA1A 33 12 chr19:34413847:+ chr19:13371779:- INFRAME NA TCGA-MX-A666-01A-11R-A31P-31 PEPD-NDUFB7 19 5 chr19:33401721:- chr19:14566933:- INFRAME NA TCGA-MX-A666-01A-11R-A31P-31 SMG1P2-DOC2A 10 9 chr16:29559216:- chr16:30009525:- . NA TCGA-MX-A666-01A-11R-A31P-31 CMSS1-LNP1 11 3 chr3:100147061:+ chr3:100451719:+ INFRAME NA TCGA-MX-A666-01A-11R-A31P-31 CDK5RAP1-EPS15L1 9 4 chr20:33385650:- chr19:16355851:- INFRAME NA TCGA-MX-A666-01A-11R-A31P-31 KCNQ1OT1-PSMA1 9 2 chr11:2699328:- chr11:14611151:- . NA TCGA-R5-A7O7-01A-11R-A33Y-31 ATXN7-ZNF385D 34 7 chr3:63980167:+ chr3:21437203:- FRAMESHIFT NA TCGA-R5-A7O7-01A-11R-A33Y-31 ARHGAP21-MSRB2 23 13 chr10:24721837:- chr10:23110242:+ INFRAME NA TCGA-R5-A7O7-01A-11R-A33Y-31 ARHGEF3-CTNND2 9 9 chr3:57035088:- chr5:11732272:- FRAMESHIFT NA TCGA-R5-A7ZE-01B-11R-A354-31 DOT1L-PLEKHF1 56 44 chr19:2164265:+ chr19:29673824:+ . NA TCGA-R5-A7ZE-01B-11R-A354-31 KIAA0232-LRCH3 48 22 chr4:6824684:+ chr3:197814908:+ FRAMESHIFT NA TCGA-R5-A7ZE-01B-11R-A354-31 AP3D1-PLEKHF1 32 27 chr19:2151239:- chr19:29673824:+ . NA TCGA-R5-A7ZE-01B-11R-A354-31 CASC3-ACLY 23 19 chr17:40168417:+ chr17:41867904:- FRAMESHIFT NA TCGA-R5-A7ZE-01B-11R-A354-31 LCLAT1-FMNL2 13 49 chr2:30447383:+ chr2:152521943:+ . NA TCGA-R5-A7ZE-01B-11R-A354-31 AMBRA1-CAT 20 4 chr11:46593828:- chr11:34449192:+ . NA TCGA-R5-A7ZE-01B-11R-A354-31 CMIP-BCO1 15 5 chr16:81445541:+ chr16:81280857:+ INFRAME NA TCGA-R5-A7ZE-01B-11R-A354-31 WIPF2-ERBB2 14 7 chr17:40265146:+ chr17:39716301:+ INFRAME NA TCGA-R5-A7ZE-01B-11R-A354-31 ARHGEF2-CCT3 13 8 chr1:155954902:- chr1:156335888:- INFRAME NA TCGA-R5-A7ZE-01B-11R-A354-31 RHPN2-TSHZ3 8 4 chr19:32990514:- chr19:31275133:- . NA TCGA-R5-A7ZE-01B-11R-A354-31 FA2H-GLG1 7 6 chr16:74740023:- chr16:74472411:- INFRAME NA TCGA-R5-A7ZE-01B-11R-A354-31 ARMC7-CDR2L 7 4 chr17:75110606:+ chr17:74999504:+ INFRAME NA TCGA-R5-A7ZF-01A-11R-A354-31 MDM2-TMEM167A 8 0 chr12:68842184:+ chr5:83054730:- . NA TCGA-R5-A7ZF-01A-11R-A354-31 PPP2CA-PMPCA 5 4 chr5:134225760:- chr9:136421832:+ INFRAME NA TCGA-R5-A7ZI-01A-11R-A354-31 CP-WWTR1 8 4 chr3:149188052:- chr3:149542537:- INFRAME NA TCGA-RD-A7C1-01A-11R-A32D-31 BZW2-GAP43 20 8 chr7:16646288:+ chr3:115720794:+ . NA TCGA-RD-A8MV-01A-11R-A36D-31 AHCTF1-ATP2B4 18 11 chr1:246913232:- chr1:203707009:+ INFRAME NA TCGA-RD-A8MV-01A-11R-A36D-31 CBL-SC5D 12 7 chr11:119232695:+ chr11:121306386:+ FRAMESHIFT Likely Oncogenic NA TCGA-RD-A8MV-01A-11R-A36D-31 RBM39-RPF2P1 7 5 chr20:35709224:- chr20:35753317:+ . NA TCGA-RD-A8MV-01A-11R-A36D-31 RC3H1-CENPL 5 8 chr1:173972509:- chr1:173811306:- . NA TCGA-RD-A8MW-01A-11R-A36D-31 SULF2-DEXI 87 40 chr20:47785343:- chr16:10929559:- . NA TCGA-RD-A8MW-01A-11R-A36D-31 ZFP64-CSE1L 80 39 chr20:52191591:- chr20:49084026:+ FRAMESHIFT NA TCGA-RD-A8MW-01A-11R-A36D-31 ZC3H7A-SYT13 40 23 chr16:11768315:- chr11:45246512:- FRAMESHIFT NA TCGA-RD-A8MW-01A-11R-A36D-31 SEC63-PCBP2 37 5 chr6:107893482:- chr12:53459272:+ INFRAME NA TCGA-RD-A8MW-01A-11R-A36D-31 RERE-TPM3 21 13 chr1:8614561:- chr1:154176248:- INFRAME NA TCGA-RD-A8MW-01A-11R-A36D-31 ANKIB1-TNFRSF17 12 9 chr7:92246519:+ chr16:11966195:+ . NA TCGA-RD-A8MW-01A-11R-A36D-31 ALG8-SNX29 10 8 chr11:78124021:- chr16:12403448:+ INFRAME NA TCGA-RD-A8MW-01A-11R-A36D-31 TRMU-ATXN10 5 13 chr22:46343368:+ chr22:45689712:+ FRAMESHIFT NA TCGA-RD-A8N1-01A-12R-A36D-31 RAC1P2-EGFR 6 4 chr4:46724184:- chr7:55142286:+ . Likely Oncogenic NA TCGA-RD-A8N4-01A-21R-A36D-31 PAK1-AAMDC 18 8 chr11:77374328:- chr11:77869722:+ INFRAME NA TCGA-RD-A8N4-01A-21R-A36D-31 UVRAG-CMPK1 6 7 chr11:75961549:+ chr1:47368469:+ INFRAME NA TCGA-RD-A8N9-01A-12R-A39E-31 KIF26A-C14orf2 11 5 chr14:104139288:+ chr14:103912694:- FRAMESHIFT NA TCGA-RD-A8N9-01A-12R-A39E-31 FBXL3-MYCBP2 11 4 chr13:77026827:- chr13:77177954:- . NA TCGA-SW-A7EA-01A-12R-A354-31 CLDN18-ARHGAP26 5 5 chr3:138031105:+ chr5:142903540:+ INFRAME NA TCGA-VQ-A8DU-01A-11R-A36D-31 MYRF-PPP1R32 69 25 chr11:61765712:+ chr11:61485338:+ FRAMESHIFT NA TCGA-VQ-A8DU-01A-11R-A36D-31 IGF2-AS-QRSL1 44 15 chr11:2140947:+ chr6:106662980:+ . Likely Oncogenic NA TCGA-VQ-A8DU-01A-11R-A36D-31 SNCAIP-SRFBP1 14 16 chr5:122312284:+ chr5:122026942:+ . NA TCGA-VQ-A8DU-01A-11R-A36D-31 DOPEY2-NFIC 10 2 chr21:36164871:+ chr19:3425106:+ FRAMESHIFT NA TCGA-VQ-A8DU-01A-11R-A36D-31 SNCAIP-KIF3A 5 7 chr5:122312284:+ chr5:132734478:- . NA TCGA-VQ-A8DV-01A-12R-A36D-31 TAF6L-SCGB1A1 65 83 chr11:62776470:+ chr11:62422221:+ FRAMESHIFT NA TCGA-VQ-A8DV-01A-12R-A36D-31 HP1BP3-PINK1 46 12 chr1:20776597:- chr1:20644490:+ INFRAME NA TCGA-VQ-A8DV-01A-12R-A36D-31 KDM1A-TMEM115 22 15 chr1:23019947:+ chr3:50355547:- FRAMESHIFT NA TCGA-VQ-A8DV-01A-12R-A36D-31 ZFAND3-PDZD2 13 3 chr6:37820016:+ chr5:32061002:+ INFRAME NA TCGA-VQ-A8DZ-01A-11R-A36D-31 ERBB2-WSB1 34 42 chr17:39727878:+ chr17:27298605:+ . NA TCGA-VQ-A8DZ-01A-11R-A36D-31 ABR-ADGRB1 27 9 chr17:1050050:- chr8:142518138:+ INFRAME NA TCGA-VQ-A8DZ-01A-11R-A36D-31 NIPAL2-RGS22 12 4 chr8:98294003:- chr8:99965430:- INFRAME NA TCGA-VQ-A8DZ-01A-11R-A36D-31 RSF1-NEU3 7 8 chr11:77764598:- chr11:74994509:+ FRAMESHIFT NA TCGA-VQ-A8E0-01A-11R-A414-31 BAIAP2L1-GTF2IP1 82 12 chr7:98362357:- chr7:75196796:- . NA TCGA-VQ-A8E0-01A-11R-A414-31 IREB2-ADAMTS7P3 35 6 chr15:78478397:+ chr15:77992931:+ . NA TCGA-VQ-A8E0-01A-11R-A414-31 BAIAP2L1-TSHZ2 22 1 chr7:98400802:- chr20:53487144:+ . NA TCGA-VQ-A8E0-01A-11R-A414-31 SDSL-DTX1 18 4 chr12:113428459:+ chr12:113077424:+ INFRAME NA TCGA-VQ-A8E0-01A-11R-A414-31 CHRNA7-PRR16 18 1 chr15:32031037:+ chr5:120685954:+ INFRAME NA TCGA-VQ-A8E0-01A-11R-A414-31 MDN1-BACH2 17 1 chr6:89718366:- chr6:89928469:- . NA TCGA-VQ-A8E0-01A-11R-A414-31 TESK2-PRDX1 15 2 chr1:45490852:- chr1:45519054:- . NA TCGA-VQ-A8E0-01A-11R-A414-31 CDC7-LRRC8C 14 2 chr1:91514043:+ chr1:89718924:+ . NA TCGA-VQ-A8E2-01A-11R-A36D-31 URI1-PLEKHF1 70 23 chr19:29986417:+ chr19:29673824:+ . NA TCGA-VQ-A8E2-01A-11R-A36D-31 PTK2-CASC11 44 24 chr8:140830472:- chr8:127733959:- . NA TCGA-VQ-A8E2-01A-11R-A36D-31 PVT1-PTK2 20 16 chr8:127939676:+ chr8:140890769:- . NA TCGA-VQ-A8E2-01A-11R-A36D-31 FOXRED2-IFT27 17 9 chr22:36501241:- chr22:36767862:- INFRAME NA TCGA-VQ-A8E2-01A-11R-A36D-31 HIST1H2BD-MDN1 11 2 chr6:26158559:+ chr6:89650847:- . NA TCGA-VQ-A8E2-01A-11R-A36D-31 FAM114A1-DAB1 7 6 chr4:38891830:+ chr1:57649665:- . NA TCGA-VQ-A8E2-01A-11R-A36D-31 PTK2-PVT1 4 8 chr8:140890543:- chr8:128070160:+ . NA TCGA-VQ-A8E7-01B-11R-A414-31 ELF3-GPR37L1 171 50 chr1:202011299:+ chr1:202127741:+ FRAMESHIFT Likely Oncogenic NA TCGA-VQ-A8E7-01B-11R-A414-31 ERRFI1-NCF2 139 10 chr1:8026158:- chr1:183573292:- . Likely Oncogenic NA TCGA-VQ-A8E7-01B-11R-A414-31 EPOP-CPD 9 6 chr17:38672318:- chr17:30454728:+ . NA TCGA-VQ-A8P2-01A-11R-A36D-31 RAB11FIP3-MCRIP2 13 11 chr16:496859:+ chr16:647417:+ INFRAME NA TCGA-VQ-A8P5-01A-11R-A39E-31 EHMT2-CRB1 15 3 chr6:31886581:- chr1:197328422:+ FRAMESHIFT NA TCGA-VQ-A8P8-01A-11R-A39E-31 DYRK1A-TTC3 2 0 chr21:37420384:+ chr21:37108392:+ FRAMESHIFT NA TCGA-VQ-A8PC-01A-11R-A39E-31 GP2-LYZ 50 33 chr16:20311218:- chr12:69353773:+ . NA TCGA-VQ-A8PC-01A-11R-A39E-31 ROR1-UBE2U 24 7 chr1:64050716:+ chr1:64241652:+ FRAMESHIFT NA TCGA-VQ-A8PC-01A-11R-A39E-31 LMO7-KLF12 21 7 chr13:75636726:+ chr13:73715525:- FRAMESHIFT NA TCGA-VQ-A8PD-01A-11R-A414-31 NEDD4L-ALPK2 16 4 chr18:58044708:+ chr18:58529238:- FRAMESHIFT NA TCGA-VQ-A8PD-01A-11R-A414-31 SAP30BP-SMIM6 10 4 chr17:75671863:+ chr17:75646655:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 FBXO46-LGALS4 808 35 chr19:45730849:- chr19:38806595:- . NA TCGA-VQ-A8PE-01A-11R-A414-31 ARMC6-UBA52 141 41 chr19:19033930:+ chr19:18573293:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 DSTN-BANF2 121 44 chr20:17604631:+ chr20:17735665:+ FRAMESHIFT NA TCGA-VQ-A8PE-01A-11R-A414-31 ATF7-ATP5G2 58 70 chr12:53626279:- chr12:53672645:- . NA TCGA-VQ-A8PE-01A-11R-A414-31 FRMD8-MUC6 63 17 chr11:65400867:+ chr11:1015883:- FRAMESHIFT NA TCGA-VQ-A8PE-01A-11R-A414-31 MKL2-MIR193BHG 42 25 chr16:14079354:+ chr16:14326013:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 LETM1-SLBP 37 11 chr4:1819338:- chr4:1703700:- FRAMESHIFT NA TCGA-VQ-A8PE-01A-11R-A414-31 IRAK2-VHL 35 9 chr3:10178020:+ chr3:10149787:+ INFRAME Likely Oncogenic NA TCGA-VQ-A8PE-01A-11R-A414-31 KHDRBS1-LCK 28 5 chr1:32039573:+ chr1:32274325:+ INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 AXIN1-ARHGDIG 20 6 chr16:346148:- chr16:268776:+ . Likely Oncogenic NA TCGA-VQ-A8PE-01A-11R-A414-31 CLEC16A-ATF7IP2 20 2 chr16:11061022:+ chr16:10480879:+ INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 ZBTB7A-COMP 18 8 chr19:4060604:- chr19:18788642:- . NA TCGA-VQ-A8PE-01A-11R-A414-31 SRC-PTPRT 16 10 chr20:37365277:+ chr20:42161542:- . Likely Oncogenic NA TCGA-VQ-A8PE-01A-11R-A414-31 ETV4-CHID1 17 5 chr17:43544975:- chr11:870499:- INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 PLEKHG5-SAMD4B 16 9 chr1:6490445:- chr19:39379966:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 RABEP1-ZMYND15 16 6 chr17:5282520:+ chr17:4743303:+ INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 KIF3B-POFUT1 16 4 chr20:32327661:+ chr20:32230819:+ INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 USP4-AGO3 12 10 chr3:49339924:- chr1:36004341:+ FRAMESHIFT NA TCGA-VQ-A8PE-01A-11R-A414-31 VPS13B-SPAG1 14 2 chr8:99193057:+ chr8:100191390:+ INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 SIPA1L3-RINL 12 8 chr19:37907358:+ chr19:38871870:- . NA TCGA-VQ-A8PE-01A-11R-A414-31 KLHL5-UBE2K 13 2 chr4:39045096:+ chr4:39737420:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 GDA-C9orf85 10 11 chr9:72202742:+ chr9:71918425:+ INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 ENG-NOL9 10 3 chr9:127817149:- chr1:6544922:- INFRAME NA TCGA-VQ-A8PE-01A-11R-A414-31 MIRLET7BHG-CDC42EP1 9 7 chr22:46086160:+ chr22:37566072:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 TUBD1-PTRH2 10 3 chr17:59878227:- chr17:59679519:- . NA TCGA-VQ-A8PE-01A-11R-A414-31 RALY-TBKBP1 8 5 chr20:34084809:+ chr17:47696079:+ . NA TCGA-VQ-A8PE-01A-11R-A414-31 BOK-MEOX1 6 9 chr2:241562476:+ chr17:43643660:- INFRAME NA TCGA-VQ-A8PH-01A-12R-A414-31 RPP14-FLNB 73 20 chr3:58310591:+ chr3:58168440:+ FRAMESHIFT NA TCGA-VQ-A8PH-01A-12R-A414-31 PLCG1-EYA2 64 16 chr20:41170269:+ chr20:47169139:+ INFRAME NA TCGA-VQ-A8PH-01A-12R-A414-31 CTNNA1-REEP2 20 4 chr5:138827718:+ chr5:138441016:+ FRAMESHIFT NA TCGA-VQ-A8PH-01A-12R-A414-31 NEMP1-OR6C4 19 7 chr12:57069234:- chr12:55551209:+ . NA TCGA-VQ-A8PH-01A-12R-A414-31 STAU1-MAP1LC3A 15 12 chr20:49151582:- chr20:34549905:+ . NA TCGA-VQ-A8PH-01A-12R-A414-31 SMG7-LAMC2 13 1 chr1:183472649:+ chr1:183207881:+ FRAMESHIFT NA TCGA-VQ-A8PH-01A-12R-A414-31 ACOX1-EXOC7 10 2 chr17:75955566:- chr17:76094581:- FRAMESHIFT NA TCGA-VQ-A8PH-01A-12R-A414-31 ADNP-SLPI 9 5 chr20:50928651:- chr20:45253733:- . NA TCGA-VQ-A8PJ-01A-11R-A414-31 AXIN1-MRPL28 43 5 chr16:352369:- chr16:368635:- . Likely Oncogenic NA TCGA-VQ-A8PJ-01A-11R-A414-31 TMPRSS2-MX1 29 3 chr21:41473325:- chr21:41430533:+ . Likely Oncogenic NA TCGA-VQ-A8PJ-01A-11R-A414-31 AKAP8-RPL28 20 3 chr19:15355307:- chr19:55386350:+ . NA TCGA-VQ-A8PJ-01A-11R-A414-31 DDX5-SKAP1 20 0 chr17:64500549:- chr17:48396785:- INFRAME NA TCGA-VQ-A8PK-01A-12R-A414-31 CLIP2-GTF2I 114 19 chr7:74317667:+ chr7:74689124:+ . NA TCGA-VQ-A8PK-01A-12R-A414-31 KIAA1551-BORCS5 114 16 chr12:31960871:+ chr12:12435628:+ . NA TCGA-VQ-A8PK-01A-12R-A414-31 ABR-ASPA 14 1 chr17:1228793:- chr17:3481603:+ . NA TCGA-VQ-A8PK-01A-12R-A414-31 USP54-AP3M1 7 4 chr10:73571421:- chr10:74138382:- . NA TCGA-VQ-A8PM-01A-21R-A414-31 NFE2L2-VMP1 142 13 chr2:177264532:- chr17:59773754:+ INFRAME NA TCGA-VQ-A8PM-01A-21R-A414-31 TRAF3-WDR20 23 9 chr14:102871968:+ chr14:102194938:+ INFRAME NA TCGA-VQ-A8PM-01A-21R-A414-31 DYRK1A-TTC3 19 1 chr21:37367628:+ chr21:37195675:+ . NA TCGA-VQ-A8PM-01A-21R-A414-31 SZRD1-PRDM2 13 1 chr1:16367308:+ chr1:13749361:+ INFRAME NA TCGA-VQ-A8PM-01A-21R-A414-31 CTNNA1-PKD2L2 6 6 chr5:138827718:+ chr5:137942384:+ . NA TCGA-VQ-A8PQ-01A-11R-A414-31 MED26-ZSCAN18 35 10 chr19:16627872:- chr19:58090386:- FRAMESHIFT NA TCGA-VQ-A8PQ-01A-11R-A414-31 FBXW8-SRI 11 12 chr12:116911355:+ chr7:88217191:- INFRAME NA TCGA-VQ-A8PQ-01A-11R-A414-31 FUT9-FBXO21 8 6 chr6:96016212:+ chr12:117189362:- . NA TCGA-VQ-A8PU-01A-12R-A414-31 TMEM179B-RSF1 45 7 chr11:62787527:+ chr11:77702495:- FRAMESHIFT NA TCGA-VQ-A8PX-01A-12R-A414-31 NEDD4L-ALPK2 145 16 chr18:58366228:+ chr18:58524062:- INFRAME NA TCGA-VQ-A8PX-01A-12R-A414-31 ARMC8-CLDN18 19 0 chr3:138188530:+ chr3:138029797:+ FRAMESHIFT NA TCGA-VQ-A91K-01A-11R-A414-31 SMARCA4-CARM1 226 45 chr19:10989443:+ chr19:10912184:+ INFRAME Likely Oncogenic NA TCGA-VQ-A91K-01A-11R-A414-31 TMEM59-SSBP3 100 31 chr1:54036610:- chr1:54257186:- INFRAME NA TCGA-VQ-A91K-01A-11R-A414-31 FAM162A-CASR 37 7 chr3:122384299:+ chr3:122275812:+ FRAMESHIFT NA TCGA-VQ-A91K-01A-11R-A414-31 ARAP1-FCHSD2 19 1 chr11:72694980:- chr11:72868026:- FRAMESHIFT NA TCGA-VQ-A91S-01A-11R-A414-31 STARD3-JUP 1235 302 chr17:39637231:+ chr17:41771862:- . NA TCGA-VQ-A91S-01A-11R-A414-31 MED15-FKBP10 858 177 chr22:20537204:+ chr17:41821654:+ FRAMESHIFT NA TCGA-VQ-A91S-01A-11R-A414-31 SOX6-C20orf24 49 10 chr11:15986204:- chr20:36609601:+ INFRAME NA TCGA-VQ-A91S-01A-11R-A414-31 HNF4A-TTPAL 36 5 chr20:44355853:+ chr20:44479985:+ . NA TCGA-VQ-A91S-01A-11R-A414-31 CEP44-SPTAN1 18 4 chr4:174302186:+ chr9:128591477:+ INFRAME NA TCGA-VQ-A91S-01A-11R-A414-31 RALGPS1-ZNF79 17 3 chr9:127174782:+ chr9:127435090:+ FRAMESHIFT NA TCGA-VQ-A91S-01A-11R-A414-31 NPHP4-FAM71B 11 4 chr1:5947104:- chr5:157163658:- INFRAME NA TCGA-VQ-A91U-01A-11R-A414-31 PODXL2-LSAMP 5 1 chr3:127639523:+ chr3:116444955:- INFRAME NA TCGA-VQ-A91V-01A-11R-A414-31 MRPS35-INTS13 12 5 chr12:27724186:+ chr12:26925851:- FRAMESHIFT NA TCGA-VQ-A91X-01A-12R-A414-31 PPP1R1B-MIEN1 957 817 chr17:39636004:+ chr17:39729761:- . NA TCGA-VQ-A91X-01A-12R-A414-31 STARD3-ACLY 15 8 chr17:39662344:+ chr17:41897839:- INFRAME NA TCGA-VQ-A91Z-01A-11R-A414-31 WNK2-FAM120A 53 14 chr9:93259614:+ chr9:93497471:+ INFRAME NA TCGA-VQ-A91Z-01A-11R-A414-31 SLC38A10-TMEM131 29 4 chr17:81270918:- chr2:97805703:- INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 CHAMP1-COL4A2 89 15 chr13:114321232:+ chr13:110507935:+ . NA TCGA-VQ-A922-01A-11R-A414-31 SPTBN1-SPAG5 37 5 chr2:54599243:+ chr17:28593066:- INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 RRBP1-PCSK2 28 4 chr20:17615433:- chr20:17481582:+ . NA TCGA-VQ-A922-01A-11R-A414-31 PRKCZ-ATAD3C 27 1 chr1:2059591:+ chr1:1468384:+ FRAMESHIFT NA TCGA-VQ-A922-01A-11R-A414-31 C6orf106-DEFB110 25 5 chr6:34646601:- chr6:50009271:- INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 GPX4-SPNS3 25 2 chr19:1105809:+ chr17:4478572:+ FRAMESHIFT NA TCGA-VQ-A922-01A-11R-A414-31 HNRNPR-CNR2 22 3 chr1:23333518:- chr1:23875662:- . NA TCGA-VQ-A922-01A-11R-A414-31 C16orf72-ABAT 19 4 chr16:9103259:+ chr16:8757757:+ INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 DSG1-TNXB 18 2 chr18:31340025:+ chr6:32070414:- INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 PPP3CC-XPO7 18 2 chr8:22441458:+ chr8:21994363:+ FRAMESHIFT NA TCGA-VQ-A922-01A-11R-A414-31 CAPZB-TMCO4 14 1 chr1:19385505:- chr1:19700885:- FRAMESHIFT NA TCGA-VQ-A922-01A-11R-A414-31 ABI2-SPATS2L 13 3 chr2:203367044:+ chr2:200389223:+ FRAMESHIFT NA TCGA-VQ-A922-01A-11R-A414-31 UGDH-PDS5A 13 2 chr4:39527283:- chr4:39908540:- . NA TCGA-VQ-A922-01A-11R-A414-31 CTNNBL1-ETFA 13 1 chr20:37803048:+ chr15:76216597:- FRAMESHIFT NA TCGA-VQ-A922-01A-11R-A414-31 DGKA-DSG1 12 5 chr12:55940433:+ chr18:31328189:+ INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 DDR1-TUBB 11 1 chr6:30882983:+ chr6:30723373:+ . NA TCGA-VQ-A922-01A-11R-A414-31 DIS3-KLF12 10 2 chr13:72771795:- chr13:73846373:- INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 RCC1L-HIP1 10 1 chr7:75058588:- chr7:75599247:- INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 ETFRF1-LRMP 10 0 chr12:25195337:+ chr12:25106943:+ . NA TCGA-VQ-A922-01A-11R-A414-31 ATG5-SCML4 9 3 chr6:106279661:- chr6:107772386:- . NA TCGA-VQ-A922-01A-11R-A414-31 FANCD2-WDR93 9 2 chr3:10065979:+ chr15:89716911:+ INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 MINK1-SPNS2 9 2 chr17:4833640:+ chr17:4513247:+ INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 REPS2-TXLNG 9 2 chrX:17103779:+ chrX:16829576:+ INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 CDC5L-POLH 9 1 chr6:44408632:+ chr6:43600988:+ INFRAME NA TCGA-VQ-A922-01A-11R-A414-31 RNF19A-KB-1562D12.1 7 7 chr8:100309867:- chr8:101461617:- . NA TCGA-VQ-A922-01A-11R-A414-31 MPHOSPH9-PTPRR 8 2 chr12:123221372:- chr12:70701323:- INFRAME NA TCGA-VQ-A925-01A-11R-A414-31 VGLL4-TMEM40 106 27 chr3:11702971:- chr3:12749840:- . NA TCGA-VQ-A925-01A-11R-A414-31 NCK2-MRPS9 81 24 chr2:105745138:+ chr2:105088984:+ . NA TCGA-VQ-A925-01A-11R-A414-31 STN1-COL17A1 53 24 chr10:103889072:- chr10:104035563:- INFRAME NA TCGA-VQ-A925-01A-11R-A414-31 SRPK1-CCND3 45 44 chr6:35920468:- chr6:41940585:- FRAMESHIFT NA TCGA-VQ-A925-01A-11R-A414-31 SEL1L3-CCKAR 47 6 chr4:25757534:- chr4:26483283:- FRAMESHIFT NA TCGA-VQ-A925-01A-11R-A414-31 AK2-MKL1 38 20 chr1:33036736:- chr22:40463286:- FRAMESHIFT NA TCGA-VQ-A925-01A-11R-A414-31 EPB41L1-PHF20 22 8 chr20:36112480:+ chr20:35842573:+ . NA TCGA-VQ-A925-01A-11R-A414-31 SSH2-SLC6A4 18 20 chr17:29793894:- chr17:30222915:- . NA TCGA-VQ-A925-01A-11R-A414-31 TMEM182-IL18R1 15 4 chr2:102764427:+ chr2:102362633:+ . NA TCGA-VQ-A925-01A-11R-A414-31 ACOT7-PLEKHG5 14 4 chr1:6281102:- chr1:6496569:- FRAMESHIFT NA TCGA-VQ-A925-01A-11R-A414-31 SMAD3-MAP2K5 13 5 chr15:67066360:+ chr15:67586846:+ FRAMESHIFT Likely Oncogenic NA TCGA-VQ-A925-01A-11R-A414-31 TRIM4-ZCWPW1 10 7 chr7:99919009:- chr7:100409544:- FRAMESHIFT NA TCGA-VQ-A928-01A-11R-A414-31 WDR45B-RAB40B 59 10 chr17:82643949:- chr17:82664556:- INFRAME NA TCGA-VQ-A928-01A-11R-A414-31 RCOR1-AMN 44 33 chr14:102593325:+ chr14:102923711:+ INFRAME NA TCGA-VQ-A928-01A-11R-A414-31 HIP1R-C12orf65 33 12 chr12:122859830:+ chr12:123253647:+ . NA TCGA-VQ-A928-01A-11R-A414-31 CBX5-SMUG1 29 19 chr12:54280008:- chr12:54172109:- . NA TCGA-VQ-A928-01A-11R-A414-31 UBTF-PYY 23 14 chr17:44218172:- chr17:43966532:- . NA TCGA-VQ-A928-01A-11R-A414-31 INTS4-NARS2 25 3 chr11:77978996:- chr11:78443758:- INFRAME NA TCGA-VQ-A928-01A-11R-A414-31 BRD4-NOTCH3 21 4 chr19:15332290:- chr19:15170825:- . Oncogenic NA TCGA-VQ-A928-01A-11R-A414-31 PMPCB-WWOX 21 2 chr7:103298708:+ chr16:79211608:+ INFRAME NA TCGA-VQ-A928-01A-11R-A414-31 PBRM1-WDR82 15 3 chr3:52678500:- chr3:52270809:- INFRAME Likely Oncogenic NA TCGA-VQ-A928-01A-11R-A414-31 RTN3-COX8A 14 5 chr11:63681778:+ chr11:63976225:+ FRAMESHIFT NA TCGA-VQ-A928-01A-11R-A414-31 TMEM204-HN1L 13 5 chr16:1528796:+ chr16:1685439:+ . NA TCGA-VQ-A928-01A-11R-A414-31 PPP4R3A-CCDC88C 11 5 chr14:91485632:- chr14:91273653:- INFRAME NA TCGA-VQ-A928-01A-11R-A414-31 UCKL1-ZBTB46 7 6 chr20:63940950:- chr20:63790790:- . NA TCGA-VQ-A92D-01A-11R-A414-31 TFEB-SUPT3H 200 38 chr6:41689731:- chr6:44829857:- INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 ATG13-C11orf49 104 11 chr11:46650317:+ chr11:47155176:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 ZRANB1-LHPP 83 11 chr10:124943307:+ chr10:124517180:+ FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 CDH3-SNTB2 66 9 chr16:68687736:+ chr16:69299590:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 CDK5RAP3-SP2 61 10 chr17:47977910:+ chr17:47924919:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 CCNB2-TCF12 59 6 chr15:59117368:+ chr15:57286157:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 GSDMB-NT5C3B 53 18 chr17:39909756:- chr17:41827626:- INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 BCAS3-VMP1 54 13 chr17:60910702:+ chr17:59817712:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 UCK2-PBX1 51 10 chr1:165905969:+ chr1:164792494:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 GATAD2A-NCAN 43 6 chr19:19436219:+ chr19:19248700:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 MIEF1-TAB1 42 7 chr22:39504534:+ chr22:39426703:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 FRMD8-MARK2 39 4 chr11:65387121:+ chr11:63895159:+ FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 ST6GAL1-KNG1 31 6 chr3:186963926:+ chr3:186739099:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 STX7-TARID 31 6 chr6:132503446:- chr6:133568248:- . NA TCGA-VQ-A92D-01A-11R-A414-31 ZZEF1-NLRP1 29 7 chr17:4044224:- chr17:5584500:- . NA TCGA-VQ-A92D-01A-11R-A414-31 LUC7L3-CACNA1G 28 7 chr17:50741731:+ chr17:50575543:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 GTF2I-WBSCR22 27 4 chr7:74658068:+ chr7:73686636:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 CLCN3-PALLD 26 5 chr4:169636088:+ chr4:168668190:+ FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 RBPJ-ZCCHC4 25 3 chr4:26321048:+ chr4:25361859:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 ITSN1-MRAP 23 6 chr21:33819323:+ chr21:32314551:+ FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 SF3B1-SATB2 23 5 chr2:197418509:- chr2:199308957:- INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 TNRC18-CYTH3 22 7 chr7:5387672:- chr7:6173733:- FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 EEF2K-SDR42E2 22 0 chr16:22206679:+ chr16:22181519:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 VGLL4-IQSEC1 21 4 chr3:11702971:- chr3:12941865:- FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 CCM2-OGDH 20 6 chr7:45000363:+ chr7:44645327:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 DENND1B-ATP6V1G3 17 11 chr1:197715031:- chr1:198529181:- FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 ITGB4-LLGL2 18 2 chr17:75727505:+ chr17:75556046:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 ITSN2-DTNB 17 0 chr2:24303799:- chr2:25639094:- FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 CHN2-TAX1BP1 16 1 chr7:29194990:+ chr7:27785163:+ FRAMESHIFT NA TCGA-VQ-A92D-01A-11R-A414-31 IQGAP1-ABHD2 13 6 chr15:90474133:+ chr15:89175812:+ INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 METTL23-SAP30BP 14 1 chr17:76733375:+ chr17:75693438:+ . NA TCGA-VQ-A92D-01A-11R-A414-31 MAD1L1-CARD11 13 2 chr7:2014502:- chr7:2917385:- INFRAME NA TCGA-VQ-A92D-01A-11R-A414-31 FMN1-PATL2 13 1 chr15:33064957:- chr15:44676565:- . NA TCGA-VQ-A92D-01A-11R-A414-31 LRBA-FBXW7 11 2 chr4:150808320:- chr4:152350124:- FRAMESHIFT Likely Oncogenic NA TCGA-VQ-A92D-01A-11R-A414-31 ZNF433-SLC1A6 10 5 chr19:12034829:- chr19:14954329:- FRAMESHIFT NA TCGA-VQ-A94O-01A-11R-A414-31 URI1-EIF3H 33 9 chr19:29942664:+ chr8:116658980:- FRAMESHIFT NA TCGA-VQ-A94O-01A-11R-A414-31 COG4-AARS 23 6 chr16:70496266:- chr16:70277154:- INFRAME NA TCGA-VQ-A94O-01A-11R-A414-31 GPR37L1-ELF3 22 3 chr1:202123593:+ chr1:202015880:+ . Likely Oncogenic NA TCGA-VQ-A94P-01A-13R-A414-31 CLDN18-ARHGAP26 3 0 chr3:138031105:+ chr5:143014080:+ INFRAME NA TCGA-VQ-A94R-01A-11R-A414-31 RERE-UTS2 85 11 chr1:8422727:- chr1:7853505:- . NA TCGA-VQ-A94U-01A-12R-A414-31 DDX52-SSH2 7 6 chr17:37624344:- chr17:29703062:- INFRAME NA TCGA-VQ-AA68-01A-11R-A414-31 CCSER1-SPARCL1 14 2 chr4:90468354:+ chr4:87473803:- FRAMESHIFT NA TCGA-VQ-AA68-01A-11R-A414-31 ZDHHC20-SPATA13 11 3 chr13:21413652:- chr13:24222819:+ . NA TCGA-VQ-AA69-01A-11R-A414-31 TCF20-CYP2D6 14 3 chr22:42343479:- chr22:42128944:- . NA TCGA-VQ-AA6A-01A-11R-A414-31 ESCO1-ARHGAP28 46 10 chr18:21600623:- chr18:6824762:+ . NA TCGA-VQ-AA6A-01A-11R-A414-31 MTHFR-EXOSC10 40 12 chr1:11800212:- chr1:11095881:- FRAMESHIFT NA TCGA-VQ-AA6A-01A-11R-A414-31 RRP7BP-NFAM1 29 5 chr22:42580217:- chr22:42397956:- . NA TCGA-VQ-AA6A-01A-11R-A414-31 MSL2-UBASH3B 23 6 chr3:136194972:- chr11:122798942:+ INFRAME NA TCGA-VQ-AA6A-01A-11R-A414-31 TAOK1-ANKRD13B 15 2 chr17:29451680:+ chr17:29607742:+ INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 SEMA4B-CIB2 377 96 chr15:90185081:+ chr15:78111276:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 ADGRG1-BCAR4 149 54 chr16:57620136:+ chr16:11820297:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 EPHA2-FBXO42 114 21 chr1:16148378:- chr1:16256759:- INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 ERBB3-IKZF4 77 18 chr12:56099747:+ chr12:56027884:+ . NA TCGA-VQ-AA6D-01A-11R-A414-31 NCOA6-GGT7 59 14 chr20:34825472:- chr20:34852538:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 BAZ2A-NACA 49 20 chr12:56630776:- chr12:56724523:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 SLC5A1-YWHAH 30 7 chr22:32050014:+ chr22:31956139:+ INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 STK24-DOCK9 26 17 chr13:98519243:- chr13:98880672:- INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 USP48-WNT4 28 5 chr1:21715389:- chr1:22129851:- INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 PTGES2-CIZ1 23 7 chr9:128128248:- chr9:128177763:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 DNAJC8-ZNF3 20 17 chr1:28232921:- chr7:100077433:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 TIMP2-RBFOX3 21 2 chr17:78924959:- chr17:79097745:- INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 HOXC4-HOXC12 19 3 chr12:54017414:+ chr12:53956328:+ . NA TCGA-VQ-AA6D-01A-11R-A414-31 HOXC6-HOXC12 19 3 chr12:54017414:+ chr12:53956328:+ . NA TCGA-VQ-AA6D-01A-11R-A414-31 CORO1B-TMEM134 15 4 chr11:67443404:- chr11:67468092:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 ATR-R3HDM2 14 5 chr3:142566121:- chr12:57256511:- INFRAME Likely Oncogenic NA TCGA-VQ-AA6D-01A-11R-A414-31 HKDC1-SUPV3L1 13 3 chr10:69250652:+ chr10:69191655:+ INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 GIGYF2-COG4 12 6 chr2:232806657:+ chr16:70517740:- FRAMESHIFT NA TCGA-VQ-AA6D-01A-11R-A414-31 BAD-TRMT112 12 5 chr11:64284182:- chr11:64317365:- INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 PIM3-FRMD8 11 1 chr22:49962831:+ chr11:65413299:+ . NA TCGA-VQ-AA6D-01A-11R-A414-31 TET2-ARHGEF38 9 5 chr4:105190505:+ chr4:105589248:+ . Likely Oncogenic NA TCGA-VQ-AA6D-01A-11R-A414-31 TRAIP-ACTBP13 10 0 chr3:49847525:- chr3:49876271:- . NA TCGA-VQ-AA6D-01A-11R-A414-31 SMPDL3A-FABP7 9 3 chr6:122789458:+ chr6:122780291:+ INFRAME NA TCGA-VQ-AA6D-01A-11R-A414-31 DCAF7-ACE3P 8 2 chr17:63550815:+ chr17:63507056:+ . NA TCGA-VQ-AA6D-01A-11R-A414-31 TMEM87B-MERTK 8 0 chr2:112060037:+ chr2:112008383:+ INFRAME NA TCGA-VQ-AA6F-01A-31R-A414-31 MRPL42-NACAP3 29 11 chr12:93487660:+ chr12:93124377:- . NA TCGA-VQ-AA6F-01A-31R-A414-31 ADCY10P1-APOBEC2 21 8 chr6:41137561:+ chr6:41061328:+ . NA TCGA-VQ-AA6G-01A-11R-A414-31 TRIM31-ZFP57 57 32 chr6:30109026:- chr6:29677366:- . NA TCGA-VQ-AA6G-01A-11R-A414-31 MED24-STAC2 18 6 chr17:40053298:- chr17:39213132:- INFRAME NA TCGA-VQ-AA6J-01A-11R-A414-31 AP3B1-CAMLG 136 62 chr5:78216055:- chr5:134750759:+ INFRAME NA TCGA-VQ-AA6J-01A-11R-A414-31 XKR6-HOOK3 33 9 chr8:11200576:- chr8:42966473:+ INFRAME NA TCGA-VQ-AA6J-01A-11R-A414-31 CLCN5-PAGE1 28 12 chrX:49925314:+ chrX:49691374:- INFRAME NA TCGA-2G-AAF6-01A-11R-A430-07 SUGCT-RALA 6 8 chr7:40135120:+ chr7:39686631:+ . NA TCGA-2G-AAF6-01A-11R-A430-07 GIT2-SLC2A13 3 8 chr12:109988963:- chr12:39951365:- FRAMESHIFT NA TCGA-2G-AAF8-01A-11R-A430-07 CCDC91-AEBP2 6 21 chr12:28259442:+ chr12:19462510:+ FRAMESHIFT NA TCGA-2G-AAFI-01A-21R-A430-07 SF3B3-ADAM12 10 24 chr16:70570149:+ chr10:126278988:- INFRAME NA TCGA-2G-AAFI-01A-21R-A430-07 UBE2Q2-TMEM266 3 1 chr15:75891014:+ chr15:76169816:+ INFRAME NA TCGA-2G-AAFL-01A-21R-A430-07 SAFB2-LONP1 2 18 chr19:5621309:- chr19:5692208:- INFRAME NA TCGA-2G-AAFM-01A-11R-A430-07 TYW1B-GTF2IRD2P1 6 16 chr7:72713621:- chr7:73280118:- . NA TCGA-2G-AAFV-01A-11R-A430-07 LIN28A-CD52 9 29 chr1:26411582:+ chr1:26320171:+ INFRAME NA TCGA-2G-AAFV-01A-11R-A430-07 AUTS2-NCOA3 2 2 chr7:70698620:+ chr20:47583183:+ . NA TCGA-2G-AAG0-01A-11R-A430-07 RCC1-PCMT1 1 4 chr1:28508160:+ chr6:149789954:+ . NA TCGA-2G-AAG8-01A-31R-A430-07 YARS-ZBTB8OS 49 334 chr1:32791162:- chr1:32631879:- INFRAME NA TCGA-2G-AAG8-01A-31R-A430-07 ICMT-ACOT7 9 52 chr1:6231902:- chr1:6264695:- INFRAME NA TCGA-2G-AAGA-01A-11R-A430-07 EDC3-SLC6A11 8 23 chr15:74655733:- chr3:10926004:+ INFRAME NA TCGA-2G-AAGC-01A-21R-A430-07 RCOR1-EMC3 3 11 chr14:102593325:+ chr3:9981733:- INFRAME NA TCGA-2G-AAGG-01A-11R-A430-07 ATP2B1-YAF2 4 37 chr12:89627678:- chr12:42199235:- FRAMESHIFT NA TCGA-2G-AAGG-01A-11R-A430-07 KIF13B-RPL23AP82 3 6 chr8:29180104:- chr22:50798655:+ . NA TCGA-2G-AAGG-01A-11R-A430-07 ANKRD28-HACL1 2 2 chr3:15859377:- chr3:15568586:- INFRAME NA TCGA-2G-AAGG-01A-11R-A430-07 DMTN-NPM2 1 3 chr8:22073835:+ chr8:22025216:+ . NA TCGA-2G-AAGJ-01A-11R-A430-07 SP6-IGKJ4 292 0 chr17:47847039:- chr2:88860920:- . NA TCGA-2G-AAGP-01A-11R-A430-07 GNB1-LDHB 13 26 chr1:1825397:- chr12:21654677:- . NA TCGA-2G-AAGT-01A-11R-A430-07 SORBS1-XRCC6P1 10 0 chr10:95493165:- chr10:93209061:- . NA TCGA-2G-AAGT-01A-11R-A430-07 KIF21A-CPM 2 9 chr12:39442927:- chr12:68885889:- FRAMESHIFT NA TCGA-2G-AAGT-01A-11R-A430-07 NIT2-LNP1 1000 1000 chr3:100341161:+ chr3:100429697:+ . NA TCGA-2G-AAGZ-01A-11R-A430-07 PTK7-SRF 2 14 chr6:43076567:+ chr6:43178806:+ INFRAME NA TCGA-2G-AAH0-01A-11R-A430-07 KCNMB4-CNOT2 4 1 chr12:70367070:+ chr12:70344128:+ INFRAME NA TCGA-2G-AAH3-01A-11R-A430-07 ZNF90-CMSS1 1 1 chr19:20078135:+ chr3:100146973:+ FRAMESHIFT NA TCGA-2G-AAH4-01A-12R-A430-07 ABR-PITPNA 1 19 chr17:1050050:- chr17:1541640:- INFRAME NA TCGA-2G-AAH8-01A-11R-A430-07 LONP2-PLEKHB2 7 27 chr16:48303305:+ chr2:131120934:+ . NA TCGA-2G-AAH8-01A-11R-A430-07 MAP4-NME6 2 15 chr3:47977865:- chr3:48296829:- FRAMESHIFT NA TCGA-2G-AAKD-01A-31R-A430-07 BICD1-BORCS5 3 37 chr12:32107544:+ chr12:12435628:+ FRAMESHIFT NA TCGA-2G-AAKH-01A-11R-A430-07 PPFIBP1-SLCO1B1 16 36 chr12:27524365:+ chr12:21141514:+ . NA TCGA-2G-AAKH-01A-11R-A430-07 DOCK6-TMEM205 5 3 chr19:11242045:- chr19:11345628:- . NA TCGA-2G-AAKH-01A-11R-A430-07 PLPPR2-ANGPTL8 1 4 chr19:11357739:+ chr19:11241660:+ FRAMESHIFT NA TCGA-2G-AAKL-01A-11R-A430-07 ZNF90-CMSS1 181 882 chr19:20078135:+ chr3:100146973:+ FRAMESHIFT NA TCGA-2G-AAKL-01A-11R-A430-07 BPTF-NOL11 8 20 chr17:67948306:+ chr17:67719674:+ INFRAME NA TCGA-2G-AAKM-01A-11R-A430-07 DPPA5-KHDC3L 5 7 chr6:73353853:- chr6:73362717:+ . NA TCGA-2G-AAL5-01A-11R-A430-07 KDM2B-ORAI1 4 7 chr12:121574547:- chr12:121641041:+ INFRAME NA TCGA-2G-AAL7-01A-11R-A430-07 JARID2-NUDC 451 1180 chr6:15246584:+ chr1:26924089:+ INFRAME NA TCGA-2G-AALF-01A-11R-A430-07 PPP2R5A-SPATA17 7 22 chr1:212349242:+ chr1:217866878:+ . NA TCGA-2G-AALN-01A-11R-A430-07 HYOU1-SZRD1 1 4 chr11:119051438:- chr1:16391375:+ FRAMESHIFT NA TCGA-2G-AALR-01A-21R-A430-07 SNHG23-MEG3 13 53 chr14:100969545:+ chr14:100829034:+ . NA TCGA-2G-AALW-01A-11R-A430-07 DTNBP1-PITPNC1 7 17 chr6:15662814:- chr17:67669508:+ FRAMESHIFT NA TCGA-2G-AALY-01A-11R-A430-07 PPP4C-MVP 2 1 chr16:30076475:+ chr16:29844493:+ INFRAME NA TCGA-2G-AAM2-01A-11R-A430-07 FBLIM1-DDI2 2 7 chr1:15758848:+ chr1:15659837:+ . NA TCGA-2G-AAM3-01A-11R-A430-07 LRRC56-DEAF1 3 2 chr11:549998:+ chr11:679816:- FRAMESHIFT NA TCGA-2G-AAM4-01A-11R-A430-07 NOL8-FXN 2 10 chr9:92314267:- chr9:69046385:+ INFRAME NA TCGA-2G-AAM4-01A-11R-A430-07 VPS13B-IL2RB 1 9 chr8:99038566:+ chr22:37144205:- . NA TCGA-2X-A9D6-01A-11R-A430-07 ZCCHC14-IGHJ4 11 0 chr16:87417713:- chr14:105864254:- FRAMESHIFT NA TCGA-2X-A9D6-01A-11R-A430-07 XBP1-TTC28 3 17 chr22:28796047:- chr22:28163599:- INFRAME NA TCGA-4K-AA1G-01A-11R-A430-07 ESF1-RBM19 3 7 chr20:13728378:- chr12:113858896:- FRAMESHIFT NA TCGA-4K-AA1G-01A-11R-A430-07 GMCL1-DYSF 2 2 chr2:69830152:+ chr2:71480883:+ FRAMESHIFT NA TCGA-4K-AAAL-01A-11R-A430-07 XBP1-TTC28 3 4 chr22:28799057:- chr22:28629830:- INFRAME NA TCGA-S6-A8JY-01A-11R-A431-07 LRP6-LRRC23 12 64 chr12:12244262:- chr12:6905585:+ . NA TCGA-S6-A8JY-01A-11R-A431-07 PDCL-NCS1 1 8 chr9:122828471:- chr9:130217832:+ . NA TCGA-SB-A6J6-01A-11R-A431-07 SRPK1-CCL18 19 36 chr6:35920468:- chr17:36070447:+ FRAMESHIFT NA TCGA-SB-A6J6-01A-11R-A431-07 OBSL1-IGHJ2 9 0 chr2:219571074:- chr14:105865248:- FRAMESHIFT NA TCGA-SB-A76C-01A-11R-A431-07 FCHSD2-GLYAT 11 22 chr11:73000990:- chr11:58724511:- . NA TCGA-SN-A6IS-01A-11R-A431-07 PI4KAP2-SERPIND1 24 60 chr22:21487565:- chr22:20786875:+ . NA TCGA-SN-A6IS-01A-11R-A431-07 CRELD1-FANCD2OS 3 30 chr3:9938106:+ chr3:10081531:- . NA TCGA-SN-A6IS-01A-11R-A431-07 THOC5-TTC28 1 12 chr22:29549052:- chr22:28306643:- INFRAME NA TCGA-VF-A8AE-01A-11R-A431-07 RNF213-CEP104 2 11 chr17:80363314:+ chr1:3816370:- INFRAME NA TCGA-WZ-A7V3-01A-11R-A431-07 PCLO-PHTF2 8 4 chr7:83134250:- chr7:77900711:+ INFRAME NA TCGA-WZ-A7V3-01A-11R-A431-07 HRASLS5-RBM19 2 2 chr11:63488871:- chr12:113823321:- FRAMESHIFT NA TCGA-WZ-A7V5-01A-11R-A431-07 ARID5A-IGHJ4 8 0 chr2:96537452:+ chr14:105864256:- . NA TCGA-WZ-A8D5-01A-11R-A431-07 TTYH3-EIF3B 1 6 chr7:2632278:+ chr7:2378689:+ INFRAME NA TCGA-X3-A8G4-01A-11R-A431-07 LUC7L2-WASH3P 1 4 chr7:139409654:+ chr15:101966070:+ . NA TCGA-XE-A8H4-01A-31R-A431-07 TNK2-MELTF 10 69 chr3:195908485:- chr3:197010794:- . NA TCGA-XE-A8H5-01A-11R-A431-07 CCDC62-KNTC1 1 5 chr12:122777683:+ chr12:122601536:+ FRAMESHIFT NA TCGA-XE-AANJ-01A-11R-A431-07 MAP4-TENM4 11 35 chr3:47914817:- chr11:79070009:- . NA TCGA-XE-AANR-01A-11R-A431-07 SOS1-MAP4K3 2 3 chr2:39051144:- chr2:39378123:- INFRAME NA TCGA-XY-A89B-01A-11R-A431-07 PREX1-STAU1 1 2 chr20:48627548:- chr20:49151747:- INFRAME NA TCGA-XY-A8S2-01A-11R-A431-07 ZNF684-EIF2B3 11 9 chr1:40533181:+ chr1:44851003:- FRAMESHIFT NA TCGA-XY-A8S2-01A-11R-A431-07 FOXJ3-HIVEP3 7 21 chr1:42311050:- chr1:41849035:- . NA TCGA-XY-A8S2-01A-11R-A431-07 SPATA6-PIK3R3 2 3 chr1:48451552:- chr1:46077613:- FRAMESHIFT Likely Oncogenic NA TCGA-XY-A8S2-01A-11R-A431-07 EIF2B3-SCMH1 1 5 chr1:44926628:- chr1:41048890:- FRAMESHIFT NA TCGA-XY-A8S3-01B-11R-A431-07 TRIM71-CNOT10 2 4 chr3:32818932:+ chr3:32773457:+ FRAMESHIFT NA TCGA-YU-A90P-01A-11R-A431-07 URI1-KCNIP4 8 6 chr19:29986417:+ chr4:20850667:- INFRAME NA TCGA-YU-A90Y-01A-11R-A431-07 FGD4-KIAA1551 6 25 chr12:32598586:+ chr12:31987239:+ FRAMESHIFT NA TCGA-YU-A94I-01A-11R-A431-07 NET1-RIMKLB 8 20 chr10:5429229:+ chr12:8773321:+ FRAMESHIFT NA TCGA-YU-A94I-01A-11R-A431-07 PI4KB-CDC42SE1 7 6 chr1:151303541:- chr1:151059773:- . NA TCGA-YU-A94I-01A-11R-A431-07 PTK2B-SLC5A1 3 4 chr8:27325681:+ chr22:32066935:+ . NA TCGA-YU-AA4L-01A-11R-A431-07 ITGA9-ZNF48 3 15 chr3:37542585:+ chr16:30395780:+ . NA TCGA-YU-AA4L-01A-11R-A431-07 WDCP-SF3B6 4 7 chr2:24031063:- chr2:24068459:- INFRAME NA TCGA-YU-AA61-01A-11R-A431-07 FXR2-TP53 2 29 chr17:7601409:- chr17:7674290:- INFRAME Likely Oncogenic NA TCGA-YU-AA61-01A-11R-A431-07 SHROOM3-ART3 1 14 chr4:76555763:+ chr4:76075881:+ . NA TCGA-ZM-AA0B-01A-11R-A431-07 DGCR2-ACOT7 2 2 chr22:19064848:- chr1:6349866:- INFRAME NA TCGA-4C-A93U-01A-11R-A39I-07 ERRFI1-CACNA1E 6 10 chr1:8026158:- chr1:181577766:+ . Likely Oncogenic NA TCGA-BJ-A0YZ-01A-11R-A10U-07 PAX8-PPARG 49 498 chr2:113236601:- chr3:12379704:+ INFRAME NA TCGA-BJ-A0YZ-01A-11R-A10U-07 PPARG-PAX8 15 40 chr3:12312453:+ chr2:113227256:- . NA TCGA-BJ-A0Z2-01A-11R-A10U-07 BCORL1-RAB33A 2 17 chrX:130039282:+ chrX:130184285:+ FRAMESHIFT NA TCGA-BJ-A0ZB-01A-11R-A10U-07 GAS8-WDR59 6 18 chr16:90019768:+ chr16:74942826:- . NA TCGA-BJ-A28V-01A-11R-A19O-07 THADA-IGF2BP3 1 4 chr2:43397971:- chr7:23418824:- FRAMESHIFT NA TCGA-BJ-A28Z-01A-11R-A16R-07 CSGALNACT2-SLC16A9 3 19 chr10:43155810:+ chr10:59652950:- INFRAME NA TCGA-BJ-A2N7-01A-11R-A18C-07 RAF1-AGGF1 4 21 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-BJ-A2N7-01A-11R-A18C-07 AGGF1-RAF1 1 3 chr5:77039719:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-BJ-A2N8-01A-11R-A18C-07 RAF1-AGGF1 2 24 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-BJ-A4O9-01A-11R-A250-07 MTMR12-TERT 1 15 chr5:32263113:- chr5:1282624:- FRAMESHIFT NA TCGA-CE-A13K-01A-11R-A10U-07 SCAF8-VWA8 4 23 chr6:154774072:+ chr13:41787543:- FRAMESHIFT NA TCGA-CE-A13K-01A-11R-A10U-07 TAF3-ZDHHC14 3 15 chr10:7824560:+ chr6:157542585:+ INFRAME NA TCGA-CE-A13K-01A-11R-A10U-07 UST-CCDC6 3 10 chr6:149021481:+ chr10:59793109:- FRAMESHIFT NA TCGA-CE-A13K-01A-11R-A10U-07 TMEM242-PREP 2 8 chr6:157318782:- chr6:105397927:- INFRAME NA TCGA-CE-A3MD-01A-11R-A20F-07 APC-INSRR 4 25 chr5:112707882:+ chr1:156858693:- . Likely Oncogenic NA TCGA-CE-A482-01A-11R-A23W-07 MAP3K4-SERINC1 1 2 chr6:160992083:+ chr6:122458681:- FRAMESHIFT NA TCGA-CE-A484-01A-11R-A23W-07 TMEM178B-RBM28 2 12 chr7:141212704:+ chr7:128315020:- FRAMESHIFT NA TCGA-CE-A484-01A-11R-A23W-07 RBM28-AOAH 2 6 chr7:128317659:- chr7:36594430:- INFRAME NA TCGA-DE-A2OL-01A-11R-A18C-07 RAF1-AGGF1 1 19 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-DE-A2OL-01A-11R-A18C-07 TRA2A-THADA 1 2 chr7:23505746:- chr2:43333263:- . NA TCGA-DE-A4M9-01A-11R-A250-07 PAX8-PPARG 146 1039 chr2:113235394:- chr3:12379704:+ INFRAME NA TCGA-DE-A4M9-01A-11R-A250-07 PPARG-PAX8 6 40 chr3:12312453:+ chr2:113227256:- . NA TCGA-DE-A4MA-01A-11R-A250-07 CMTR1-ZFAND3 2 12 chr6:37477639:+ chr6:38152235:+ FRAMESHIFT NA TCGA-DJ-A13S-01A-11R-A10U-07 NAPA-CTSB 1000 1000 chr19:47487637:- chr8:11845058:- . NA TCGA-DJ-A13T-01A-11R-A10U-07 EIF5B-MGAT4A 1 1 chr2:99337589:+ chr2:98678471:- FRAMESHIFT NA TCGA-DJ-A13V-01A-11R-A10U-07 CLU-RPS4X 1 14 chr8:27604291:- chrX:72273389:- INFRAME NA TCGA-DJ-A13W-01A-11R-A10U-07 NUP153-TMEM138 1 2 chr6:17669293:- chr11:61368597:+ FRAMESHIFT NA TCGA-DJ-A1QH-01A-21R-A14Y-07 HAUS4-CAT 1 1 chr14:22952328:- chr11:34461251:+ INFRAME NA TCGA-DJ-A1QL-01A-11R-A14Y-07 TG-THADA 2171 14915 chr8:132972741:+ chr2:43293213:- INFRAME NA TCGA-DJ-A2PN-01A-21R-A19O-07 ATP5H-SPG11 1 1 chr17:75042181:- chr15:44573745:- INFRAME NA TCGA-DJ-A2PX-01A-11R-A18C-07 ENTPD1-CC2D2B 1000 1000 chr10:95864861:+ chr10:95911301:+ . NA TCGA-DJ-A2PY-01A-11R-A18C-07 MRPL37-ARHGEF10L 1 1 chr1:54200589:+ chr1:17587460:+ INFRAME NA TCGA-DJ-A2Q3-01A-11R-A18C-07 RAF1-AGGF1 6 8 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-DJ-A2Q4-01A-21R-A18C-07 RAF1-AGGF1 5 9 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-DJ-A2Q4-01A-21R-A18C-07 AGGF1-RAF1 1 1 chr5:77039719:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-DJ-A2Q5-01A-11R-A18C-07 RAF1-AGGF1 1 10 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-DJ-A2Q6-01A-11R-A18C-07 RAF1-AGGF1 2 8 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-DJ-A3UK-01A-11R-A22L-07 ENTPD1-CC2D2B 1000 1000 chr10:95864861:+ chr10:95911301:+ . NA TCGA-DJ-A4UR-01A-11R-A250-07 FRMD4B-TRAK1 1 6 chr3:69542206:- chr3:42087104:+ . NA TCGA-DJ-A4UR-01A-11R-A250-07 TRAK1-FRMD4B 1 1 chr3:42014117:+ chr3:69432761:- . NA TCGA-E3-A3E5-01A-11R-A20F-07 SMARCA4-CTSB 1 2 chr19:11024438:+ chr8:11868087:- . Likely Oncogenic NA TCGA-E8-A242-01A-21R-A16R-07 RBMS3-AS3-IGKJ4 70 0 chr3:29280891:- chr2:88860922:- . NA TCGA-E8-A432-01A-11R-A23N-07 IFT74-CACNA2D3 3 14 chr9:26990195:+ chr3:55004763:+ INFRAME NA TCGA-E8-A432-01A-11R-A23N-07 CACNA2D3-IFT74 1 8 chr3:54987753:+ chr9:27009020:+ INFRAME NA TCGA-E8-A432-01A-11R-A23N-07 CEPT1-PHF24 1 6 chr1:111161296:+ chr9:34971295:+ . NA TCGA-E8-A44M-01A-21R-A23W-07 ANK3-CCDC6 3 13 chr10:60055658:- chr10:59852702:- INFRAME NA TCGA-EL-A3CR-01A-12R-A206-07 VPS53-F7 3 2 chr17:697418:- chr13:113113752:+ INFRAME NA TCGA-EL-A3GR-01A-21R-A206-07 TSHR-GTF2A1 1 1 chr14:80955850:+ chr14:81204104:- FRAMESHIFT NA TCGA-EL-A3H2-01A-11R-A20F-07 GON4L-PMVK 1 5 chr1:155757891:- chr1:154932415:- FRAMESHIFT NA TCGA-EL-A3H3-01A-11R-A206-07 VPS8-EIF4G1 17 18 chr3:184812225:+ chr3:184331266:+ . NA TCGA-EL-A3H8-01A-11R-A20F-07 SOS1-MAP4K3 4 25 chr2:39056702:- chr2:39378123:- INFRAME NA TCGA-EL-A3T0-01A-22R-A22L-07 HMGB1-CRYL1 3 6 chr13:30617216:- chr13:20512550:- . NA TCGA-EL-A4KG-01A-11R-A250-07 FKBP2-CCDC88B 1000 1000 chr11:64243401:+ chr11:64353054:+ . NA TCGA-EM-A1CS-01A-11R-A13Y-07 RAF1-AGGF1 40 221 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-EM-A1CS-01A-11R-A13Y-07 AGGF1-RAF1 9 41 chr5:77039719:+ chr3:12600415:- INFRAME Likely Oncogenic NA TCGA-EM-A1YD-01A-11R-A14Y-07 TPO-COL9A3 1 20 chr2:1477604:+ chr20:62827923:+ INFRAME NA TCGA-EM-A22L-01A-11R-A180-07 ATP2A2-COPG1 13 1 chr12:110346876:+ chr3:129257578:+ . NA TCGA-EM-A22Q-01A-11R-A180-07 ZNF277-TPD52L1 2 1 chr7:112206807:+ chr6:125220078:+ INFRAME NA TCGA-EM-A2CN-01A-11R-A19O-07 FOXP2-ZNF680 2 1 chr7:114086611:+ chr7:64522500:- . NA TCGA-EM-A2CN-01A-11R-A19O-07 HP1BP3-THAP4 1 2 chr1:20787195:- chr2:241584725:- . NA TCGA-EM-A2CN-01A-11R-A19O-07 ACO2-TBCD 1 1 chr22:41520276:+ chr17:82814840:+ FRAMESHIFT NA TCGA-EM-A2CO-01A-11R-A19O-07 SNTA1-TPO 2 2 chr20:33438841:- chr2:1516883:+ INFRAME NA TCGA-EM-A2CO-01A-11R-A19O-07 ZNRF3-ITFG1 1 3 chr22:28884066:+ chr16:47162664:- FRAMESHIFT NA TCGA-EM-A2CP-01A-11R-A180-07 PAX8-NFE2L2 82 562 chr2:113241551:- chr2:177232583:- INFRAME NA TCGA-EM-A2OV-01A-11R-A206-07 SRPK2-PUS7 1 9 chr7:105388648:- chr7:105508544:- . NA TCGA-EM-A2OX-01A-11R-A206-07 NCOR1-RHOU 28 42 chr17:16194462:- chr1:228737673:+ FRAMESHIFT Likely Oncogenic NA TCGA-EM-A2OX-01A-11R-A206-07 WWP2-CTSB 1000 1000 chr16:69939906:+ chr8:11847721:- FRAMESHIFT NA TCGA-EM-A2P1-01A-11R-A206-07 DBN1-ZNF346 1 1 chr5:177466772:- chr5:177064512:+ FRAMESHIFT NA TCGA-EM-A2P1-01A-11R-A206-07 NOX4-SMCO4 1 1 chr11:89490458:- chr11:93499348:- . NA TCGA-EM-A2P2-01A-11R-A206-07 PLCB4-GNAS 1 1 chr20:9166695:+ chr20:58895612:+ . NA TCGA-EM-A2P3-01A-11R-A206-07 ZMYND19-ARRDC1 10 33 chr9:137586967:- chr9:137612896:+ FRAMESHIFT NA TCGA-EM-A2P3-01A-11R-A206-07 EHMT1-ZMYND19 9 2 chr9:137619049:+ chr9:137588718:- INFRAME NA TCGA-EM-A3AJ-01A-11R-A206-07 PAX8-PPARG 91 833 chr2:113235394:- chr3:12379704:+ INFRAME NA TCGA-EM-A3AJ-01A-11R-A206-07 PPARG-PAX8 10 44 chr3:12312453:+ chr2:113227256:- . NA TCGA-EM-A3AO-01A-11R-A206-07 CLSTN3-PEX5 1000 1000 chr12:7143311:+ chr12:7218402:+ . NA TCGA-EM-A3AQ-01A-11R-A20F-07 WARS-CCNY 4 16 chr14:100361708:- chr10:35483404:+ INFRAME NA TCGA-EM-A3FP-01A-11R-A21D-07 TATDN1-GSDMB 1 3 chr8:124538928:- chr17:39909924:- FRAMESHIFT NA TCGA-EM-A3O3-01A-11R-A220-07 MYCBP2-SPPL2A 1 6 chr13:77087484:- chr15:50736740:- FRAMESHIFT NA TCGA-EM-A3OB-01A-11R-A220-07 ENTPD1-CC2D2B 1000 1000 chr10:95864861:+ chr10:95911301:+ . NA TCGA-EM-A4FR-01A-11R-A250-07 ZKSCAN1-UEVLD 1 1 chr7:100024307:+ chr11:18558330:- FRAMESHIFT NA TCGA-ET-A2MX-01A-11R-A23N-07 CYTOR-ACOXL 6 28 chr2:87606769:+ chr2:110963624:+ . NA TCGA-ET-A2N3-01B-21R-A23N-07 ANKRD11-DPEP1 1 2 chr16:89490245:- chr16:89630305:+ . NA TCGA-ET-A2N4-01A-12R-A19O-07 TBC1D22B-TSC22D1 3 1 chr6:37331153:+ chr13:44433776:- . NA TCGA-ET-A39N-01A-11R-A19O-07 PAX8-PPARG 77 769 chr2:113235394:- chr3:12379704:+ INFRAME NA TCGA-ET-A3BU-01A-11R-A19O-07 RAF1-AGGF1 1 4 chr3:12604136:- chr5:77046347:+ INFRAME Likely Oncogenic NA TCGA-ET-A3BU-01A-11R-A19O-07 CELSR2-SORT1 1000 1000 chr1:109273926:+ chr1:109312131:- . NA TCGA-ET-A3DU-01A-11R-A19O-07 KPNA1-IGHJ5 15 0 chr3:122514503:- chr14:105863859:- . NA TCGA-ET-A3DV-01A-12R-A206-07 TRA2A-THADA 3 7 chr7:23505746:- chr2:43232882:- INFRAME NA TCGA-ET-A40S-01A-11R-A23N-07 PRCC-TMED5 6 28 chr1:156768239:+ chr1:93160226:- INFRAME NA TCGA-FE-A230-01A-11R-A14Y-07 PRR16-IGKJ2 30 0 chr5:120465682:+ chr2:88861556:- . NA TCGA-FE-A233-01A-11R-A14Y-07 TPCN1-GNB1 2 1 chr12:113226964:+ chr1:1825499:- . NA TCGA-FE-A235-01A-11R-A16R-07 COPZ1-C19orf18 1 2 chr12:54347844:+ chr19:57961551:- INFRAME NA TCGA-FE-A3PC-01A-11R-A220-07 MRPL30-CTSB 1000 1000 chr2:99196251:+ chr8:11842955:- . NA TCGA-FK-A3S3-01A-11R-A22L-07 MET-TFG 372 1867 chr7:116771989:+ chr3:100736576:+ INFRAME NA TCGA-FK-A3S3-01A-11R-A22L-07 TFG-MET 3 26 chr3:100732672:+ chr7:116774881:+ INFRAME NA TCGA-FY-A2QD-01A-11R-A19O-07 NFIX-GATAD2A 10 31 chr19:13074026:+ chr19:19492306:+ INFRAME NA TCGA-FY-A3ON-01A-11R-A220-07 CELSR2-SORT1 1000 1000 chr1:109273670:+ chr1:109312285:- . NA TCGA-FY-A3R6-01A-11R-A220-07 UACA-LTK 9 74 chr15:70664662:- chr15:41507174:- INFRAME NA TCGA-FY-A3WA-01A-11R-A22L-07 CBX5-TXNRD2 6 39 chr12:54241744:- chr22:19931098:- . NA TCGA-FY-A3WA-01A-11R-A22L-07 COL9A3-ACTG1 1 12 chr20:62832189:+ chr17:81510329:- . NA TCGA-FY-A40L-01A-11R-A23N-07 LLGL1-ALKBH5 8 37 chr17:18232802:+ chr17:18206815:+ INFRAME NA TCGA-H2-A2K9-01A-11R-A180-07 TMEM94-GNAS 2 4 chr17:75456751:+ chr20:58895612:+ . NA TCGA-H2-A3RI-01A-11R-A220-07 CHPT1-GNPTAB 1000 1000 chr12:101742507:+ chr12:101796540:- . NA TCGA-MK-A84Z-01A-11R-A39I-07 PICK1-CTSB 1000 1000 chr22:38067548:+ chr8:11843554:- . NA TCGA-3G-AB19-01A-21R-A42C-07 PTMA-PRSS16 1000 1000 chr2:231712956:+ chr6:27247723:+ . NA TCGA-3S-A8YW-01A-11R-A42C-07 TEAD4-TSPAN9 1 4 chr12:2960040:+ chr12:3278421:+ . NA TCGA-4V-A9QJ-01A-11R-A42C-07 PNMAL1-PPP5D1 12 166 chr19:46470993:- chr19:46482215:- . NA TCGA-4V-A9QJ-01A-11R-A42C-07 EPSTI1-TSC22D1 3 15 chr13:42991978:- chr13:44436095:- INFRAME NA TCGA-4V-A9QJ-01A-11R-A42C-07 ELL-RABGGTA 2 9 chr19:18446748:- chr14:24271169:- . NA TCGA-4V-A9QJ-01A-11R-A42C-07 PARP4-CERS1 2 6 chr13:24434395:- chr19:18869390:- FRAMESHIFT NA TCGA-4V-A9QJ-01A-11R-A42C-07 PARP4-GDF1 2 6 chr13:24434395:- chr19:18869390:- FRAMESHIFT NA TCGA-4V-A9QR-01A-11R-A42C-07 CCL25-AR 7 0 chr19:8062575:+ chrX:67545134:+ . NA TCGA-4X-A9FA-01A-11R-A42C-07 NADSYN1-KRTAP5-10 1000 1000 chr11:71524107:+ chr11:71566107:+ . NA TCGA-5K-AAAP-01A-11R-A42C-07 FAM83F-BAIAP2L2 16 51 chr22:39995531:+ chr22:38098482:- INFRAME NA TCGA-5U-AB0D-01A-11R-A42C-07 MED26-GADD45GIP1 22 43 chr19:16627872:- chr19:12954526:- FRAMESHIFT NA TCGA-5U-AB0D-01A-11R-A42C-07 NR2C2-FGD5 1 5 chr3:14962492:+ chr3:14932577:+ . NA TCGA-X7-A8D6-01A-11R-A42C-07 PAFAH2-STMN1 1000 1000 chr1:25961697:- chr1:25904739:- . NA TCGA-X7-A8D9-01A-11R-A42C-07 ATXN10-COL16A1 3 26 chr22:45672179:+ chr1:31692509:- FRAMESHIFT NA TCGA-X7-A8D9-01A-11R-A42C-07 NADK-HNRNPR 2 7 chr1:1778289:- chr1:23338608:- . NA TCGA-X7-A8DE-01A-11R-A42C-07 NADSYN1-KRTAP5-10 1000 1000 chr11:71521204:+ chr11:71566120:+ . NA TCGA-XH-A853-01A-11R-A42C-07 RAMP1-PPP1R7 1 4 chr2:237877362:+ chr2:241157807:+ FRAMESHIFT NA TCGA-XM-A8R9-01A-31R-A42C-07 LIMK2-MED15 3 7 chr22:31225819:+ chr22:20537117:+ INFRAME NA TCGA-XM-A8RE-01A-11R-A42C-07 CRELD1-JAGN1 13 22 chr3:9938163:+ chr3:9893202:+ . NA TCGA-XM-A8RF-01A-11R-A42C-07 CTDSPL-TNRC6B 3 5 chr3:37947211:+ chr22:40321090:+ INFRAME NA TCGA-XM-AAZ3-01A-11R-A42C-07 NADSYN1-KRTAP5-10 1000 1000 chr11:71524107:+ chr11:71566107:+ . NA TCGA-XU-A92V-01A-11R-A42C-07 SBNO2-NANOS3 10 53 chr19:1147309:- chr19:13880442:+ FRAMESHIFT NA TCGA-XU-A92V-01A-11R-A42C-07 DAZAP1-SBNO2 5 19 chr19:1422396:+ chr19:1127765:- FRAMESHIFT NA TCGA-XU-A92V-01A-11R-A42C-07 LRRFIP1-CARD10 1 5 chr2:237760205:+ chr22:37519217:- . NA TCGA-XU-A92Z-01A-11R-A42C-07 NFIA-CDK2AP1 56 158 chr1:61406727:+ chr12:123267282:- INFRAME NA TCGA-YT-A95D-01A-11R-A42C-07 ZBTB40-TMEM57 4 18 chr1:22490645:+ chr1:25498264:+ INFRAME NA TCGA-ZB-A961-01A-11R-A42S-07 RAI1-ATP5G1 4 21 chr17:17724159:+ chr17:48894372:+ . NA TCGA-ZB-A961-01A-11R-A42S-07 HDAC5-SLC13A2 5 13 chr17:44110729:- chr17:28489214:+ FRAMESHIFT NA TCGA-ZB-A961-01A-11R-A42S-07 NPEPPS-HDAC5 3 1 chr17:47545993:+ chr17:44093834:- INFRAME NA TCGA-ZB-A961-01A-11R-A42S-07 CWC25-FAM134C 1 4 chr17:38820901:- chr17:42592162:- INFRAME NA TCGA-ZB-A962-01A-11R-A42S-07 RPL27-NBR1 1 1 chr17:42998831:+ chr17:43196481:+ INFRAME NA TCGA-ZB-A963-01A-11R-A42S-07 ZNF74-ZNRF3 5 3 chr22:20394662:+ chr22:29048389:+ FRAMESHIFT NA TCGA-ZB-A963-01A-11R-A42S-07 FBLN1-P2RX6P 1 18 chr22:45550615:+ chr22:21044299:- . NA TCGA-ZB-A966-01A-11R-A42S-07 CYB5R4-RIPPLY2 3 6 chr6:83864328:+ chr6:83857242:+ FRAMESHIFT NA TCGA-ZB-A969-01A-11R-A42S-07 ITSN1-MAP3K7CL 99 233 chr21:33642713:+ chr21:29159941:+ . NA TCGA-ZB-A969-01A-11R-A42S-07 FOXP1-FHIT 3 66 chr3:71299820:- chr3:59752321:- . Likely Oncogenic NA TCGA-ZB-A969-01A-11R-A42S-07 FAM193A-RGS12 6 28 chr4:2639859:+ chr4:3414072:+ FRAMESHIFT NA TCGA-ZB-A969-01A-11R-A42S-07 POU2F1-ZFYVE28 2 30 chr1:167220958:+ chr4:2320271:- FRAMESHIFT NA TCGA-ZB-A969-01A-11R-A42S-07 PRDM2-LRRC38 3 12 chr1:13749487:+ chr1:13476099:- INFRAME NA TCGA-ZB-A969-01A-11R-A42S-07 CHD6-SPEN 2 4 chr20:41618340:- chr1:15872816:+ . Likely Oncogenic NA TCGA-ZB-A96A-01A-11R-A42S-07 GRK3-SYCE3 2 2 chr22:25604453:+ chr22:50556405:- FRAMESHIFT NA TCGA-ZB-A96G-01A-11R-A42S-07 ACO2-ISX 4 2 chr22:41469182:+ chr22:35082518:+ FRAMESHIFT NA TCGA-ZB-A96H-01A-11R-A42S-07 VASP-C1orf87 9 9 chr19:45507776:+ chr1:60041131:- FRAMESHIFT NA TCGA-ZB-A96L-01A-11R-A42S-07 RBM6-DOCK3 132 372 chr3:49940225:+ chr3:50841675:+ . NA TCGA-ZB-A96L-01A-11R-A42S-07 IP6K2-ALOX12P1 87 39 chr3:48717157:- chr17:30530308:+ . NA TCGA-ZB-A96L-01A-11R-A42S-07 BTBD2-AMZ2 46 114 chr19:2015297:- chr17:68248640:+ FRAMESHIFT NA TCGA-ZB-A96L-01A-11R-A42S-07 MYO18A-BCAS3 21 42 chr17:29165942:- chr17:60910532:+ INFRAME NA TCGA-ZB-A96L-01A-11R-A42S-07 EPHA3-ABCA9 5 14 chr3:89431359:+ chr17:69051139:- . NA TCGA-ZB-A96L-01A-11R-A42S-07 DOCK3-TMIGD2 2 25 chr3:50934077:+ chr19:4294816:- FRAMESHIFT NA TCGA-ZB-A96L-01A-11R-A42S-07 PRKAR2A-CACNA2D3 3 13 chr3:48847335:- chr3:54503492:+ FRAMESHIFT NA TCGA-ZB-A96L-01A-11R-A42S-07 MTSS1L-PDXDC2P 3 12 chr16:70677792:- chr16:70031968:- . NA TCGA-ZB-A96L-01A-11R-A42S-07 PXK-USP4 1 9 chr3:58333090:+ chr3:49294598:- FRAMESHIFT NA TCGA-ZB-A96L-01A-11R-A42S-07 HYAL2-SEMA3B 1 3 chr3:50318956:- chr3:50269161:+ . NA TCGA-ZB-A96L-01A-11R-A42S-07 PRKAR2A-USP4 1 2 chr3:48790544:- chr3:49324763:- INFRAME NA TCGA-2E-A9G8-01A-11R-A40A-07 RARA-CERS4 21 111 chr17:40318448:+ chr19:8251076:+ . NA TCGA-2E-A9G8-01A-11R-A40A-07 SPPL2B-GALK1 4 35 chr19:2351594:+ chr17:75751737:- . NA TCGA-2E-A9G8-01A-11R-A40A-07 PTPRU-KAZN 4 3 chr1:29275756:+ chr1:14304590:+ FRAMESHIFT NA TCGA-2E-A9G8-01A-11R-A40A-07 ZNF148-SLC41A3 1 12 chr3:125277726:- chr3:126026479:- FRAMESHIFT NA TCGA-2E-A9G8-01A-11R-A40A-07 UBE2K-WDR19 2 2 chr4:39755739:+ chr4:39244248:+ FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 WDHD1-DLGAP5 79 195 chr14:55026711:- chr14:55154806:- FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 CNOT9-ARPC2 16 290 chr2:218568978:+ chr2:218238664:+ FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 ARHGEF2-PAQR6 33 210 chr1:155965303:- chr1:156244403:- INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 MED1-GSDMB 38 168 chr17:39419717:- chr17:39906271:- INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 ZMIZ1-C10orf11 16 129 chr10:79119024:+ chr10:76036008:+ . NA TCGA-5B-A90C-01A-11R-A37O-07 STON2-RPGRIP1 11 8 chr14:81370988:- chr14:21287939:+ . NA TCGA-5B-A90C-01A-11R-A37O-07 DNM1L-FGD4 4 30 chr12:32731943:+ chr12:32638655:+ INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 NR2F6-PLVAP 7 13 chr19:17240671:- chr19:17366195:- FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 EYA2-SLC2A10 5 19 chr20:47016297:+ chr20:46725041:+ INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 KEAP1-AP1M2 3 21 chr19:10486748:- chr19:10579858:- FRAMESHIFT Likely Oncogenic NA TCGA-5B-A90C-01A-11R-A37O-07 GBF1-SFTPD 4 10 chr10:102245781:+ chr10:79938228:- . NA TCGA-5B-A90C-01A-11R-A37O-07 EML4-PKDCC 4 9 chr2:42326252:+ chr2:42053239:+ FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 DHX34-SAE1 3 11 chr19:47362693:+ chr19:47209159:+ INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 GEMIN2-CTAGE5 4 5 chr14:39132068:+ chr14:39276934:+ INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 RAB11FIP3-PLEC 4 5 chr16:482736:+ chr8:143938692:- FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 HAPLN3-RLBP1 2 8 chr15:88887175:- chr15:89219075:- . NA TCGA-5B-A90C-01A-11R-A37O-07 HTR7-C10orf11 1 7 chr10:90857133:- chr10:76036008:+ INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 C11orf80-FAM171A1 1 5 chr11:66816199:+ chr10:15221060:- INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 CCSAP-ABCB10 1 5 chr1:229342099:- chr1:229547701:- INFRAME NA TCGA-5B-A90C-01A-11R-A37O-07 C11orf84-TRPT1 1 4 chr11:63819002:+ chr11:64225869:- . NA TCGA-5B-A90C-01A-11R-A37O-07 CEP164-SIDT2 1 4 chr11:117382942:+ chr11:117188708:+ FRAMESHIFT NA TCGA-5B-A90C-01A-11R-A37O-07 SORBS1-TCTN3 1 3 chr10:95397220:- chr10:95664300:- FRAMESHIFT NA TCGA-A5-A1OH-01A-21R-A22K-07 ZNF790-ATP4A 37 96 chr19:36850002:- chr19:35553182:- . NA TCGA-A5-A1OH-01A-21R-A22K-07 AGAP1-PACRG 15 62 chr2:235883449:+ chr6:163314827:+ FRAMESHIFT NA TCGA-A5-A1OH-01A-21R-A22K-07 TBC1D15-TRHDE 13 26 chr12:71907138:+ chr12:72286681:+ FRAMESHIFT NA TCGA-A5-A1OH-01A-21R-A22K-07 TSSC4-LSP1 16 13 chr11:2400798:+ chr11:1880087:+ . NA TCGA-A5-A1OH-01A-21R-A22K-07 TSSC4-MIR7847 16 5 chr11:2400798:+ chr11:1880087:+ . NA TCGA-A5-A1OH-01A-21R-A22K-07 SNX19-RRP12 4 41 chr11:130914266:- chr10:97370796:- INFRAME NA TCGA-A5-A1OH-01A-21R-A22K-07 HMGA2-KALRN 2 40 chr12:65951415:+ chr3:124562843:+ INFRAME NA TCGA-A5-A1OH-01A-21R-A22K-07 KALRN-CREB5 4 12 chr3:124633953:+ chr7:28488175:+ INFRAME NA TCGA-A5-A1OH-01A-21R-A22K-07 SLC22A23-SMIM13 2 13 chr6:3455906:- chr6:11134403:+ FRAMESHIFT NA TCGA-A5-A1OH-01A-21R-A22K-07 CRYBB2P1-SPECC1L 1 13 chr22:25455840:+ chr22:24411588:+ . NA TCGA-A5-A1OH-01A-21R-A22K-07 ADCY1-HNRNPA2B1 2 2 chr7:45610497:+ chr7:26197732:- FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 COPZ1-HOXC9 42 20 chr12:54325181:+ chr12:54002430:+ FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 CCNF-NPW 13 72 chr16:2457016:+ chr16:2020533:+ INFRAME NA TCGA-A5-A2K2-01A-11R-A18M-07 RAB11FIP4-NPLOC4 5 28 chr17:31488272:+ chr17:81572088:- INFRAME NA TCGA-A5-A2K2-01A-11R-A18M-07 GATC-BICDL1 6 5 chr12:120457179:+ chr12:120061710:+ FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 PXN-GATC 2 12 chr12:120265617:- chr12:120457076:+ INFRAME NA TCGA-A5-A2K2-01A-11R-A18M-07 DNM2-C19orf38 1 13 chr19:10718403:+ chr19:10856265:+ FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 BCL3-ZNF233 2 5 chr19:44757723:+ chr19:44272899:+ FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 EML3-ATL3 1 8 chr11:62603729:- chr11:63633097:- FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 ZNF410-ACOT4 1 8 chr14:73923522:+ chr14:73593702:+ FRAMESHIFT NA TCGA-A5-A2K2-01A-11R-A18M-07 ABT1-BTN2A3P 1 7 chr6:26597223:+ chr6:26426242:+ . NA TCGA-A5-A2K4-01A-11R-A18M-07 ZNF512-ANXA4 15 45 chr2:27583142:+ chr2:69781520:+ . NA TCGA-A5-A2K4-01A-11R-A18M-07 FBXO46-ARG2 18 21 chr19:45730849:- chr14:67642186:+ . NA TCGA-A5-A2K4-01A-11R-A18M-07 CELSR2-SARS 8 21 chr1:109273670:+ chr1:109230878:+ FRAMESHIFT NA TCGA-A5-A2K4-01A-11R-A18M-07 COQ9-CCL17 6 23 chr16:57452936:+ chr16:57415081:+ FRAMESHIFT NA TCGA-A5-A2K4-01A-11R-A18M-07 SH3PXD2A-MAP1S 6 23 chr10:103693028:- chr19:17734273:+ FRAMESHIFT NA TCGA-A5-A2K4-01A-11R-A18M-07 TNRC18-RNF216 5 27 chr7:5423441:- chr7:5641376:- . NA TCGA-A5-A2K4-01A-11R-A18M-07 TRMT11-NCOA7 3 13 chr6:125986622:+ chr6:125928174:+ INFRAME NA TCGA-A5-A2K4-01A-11R-A18M-07 CHD7-EMID1 4 7 chr8:60801593:+ chr22:29214926:+ FRAMESHIFT NA TCGA-A5-A2K4-01A-11R-A18M-07 RRP7BP-PACSIN2 1 5 chr22:42580217:- chr22:42912157:- . NA TCGA-A5-A2K4-01A-11R-A18M-07 THRAP3-KEAP1 1 5 chr1:36224505:+ chr19:10492262:- . Likely Oncogenic NA TCGA-A5-A2K4-01A-11R-A18M-07 DIP2C-APOLD1 1 3 chr10:689494:- chr12:12812261:+ . NA TCGA-A5-A2K4-01A-11R-A18M-07 VCL-SAMD8 1 3 chr10:74109156:+ chr10:75150514:+ INFRAME NA TCGA-A5-A2K5-01A-11R-A180-07 RNF183-CD47 1 3 chr9:113302195:- chr3:108047292:- . NA TCGA-A5-A3LP-01A-11R-A22K-07 TECR-PKN1 41 158 chr19:14529711:+ chr19:14469341:+ FRAMESHIFT NA TCGA-A5-A3LP-01A-11R-A22K-07 ASH1L-IQGAP3 12 53 chr1:155562153:- chr1:156531247:- . NA TCGA-A5-A3LP-01A-11R-A22K-07 RPTOR-CD163 14 17 chr17:80625793:+ chr12:7502564:- INFRAME NA TCGA-A5-A3LP-01A-11R-A22K-07 TMOD1-TDRD7 4 4 chr9:97501803:+ chr9:97472293:+ . NA TCGA-A5-A3LP-01A-11R-A22K-07 MUC1-FAM189B 1 12 chr1:155192183:- chr1:155251164:- INFRAME NA TCGA-A5-A3LP-01A-11R-A22K-07 RNH1-TOLLIP 2 6 chr11:507113:- chr11:1295794:- . NA TCGA-A5-A3LP-01A-11R-A22K-07 KIAA0319L-EIF4G3 1 7 chr1:35554350:- chr1:21089213:- FRAMESHIFT NA TCGA-A5-A3LP-01A-11R-A22K-07 ATG2A-ESRRA 1 5 chr11:64900494:- chr11:64313951:+ FRAMESHIFT NA TCGA-A5-A3LP-01A-11R-A22K-07 LPIN2-DLGAP1 1 3 chr18:3013087:- chr18:3880140:- . NA TCGA-A5-A7WK-01A-11R-A34R-07 CTDSPL2-CKMT1A 108 32 chr15:44427772:+ chr15:43692914:+ . NA TCGA-A5-A7WK-01A-11R-A34R-07 PRRC2B-PRCD 69 116 chr9:131483445:+ chr17:76540505:+ FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 RABL2A-IL36G 38 108 chr2:113633060:+ chr2:112984840:+ . NA TCGA-A5-A7WK-01A-11R-A34R-07 ZFP90-NUTF2 25 151 chr16:68539469:+ chr16:67865102:+ . NA TCGA-A5-A7WK-01A-11R-A34R-07 MECOM-SLC7A14 25 48 chr3:169663336:- chr3:170501345:- INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 NUP188-SPTAN1 13 70 chr9:128990226:+ chr9:128613381:+ INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 LIMCH1-UCHL1 17 50 chr4:41524478:+ chr4:41256593:+ . NA TCGA-A5-A7WK-01A-11R-A34R-07 LUC7L-STXBP1 13 62 chr16:206004:- chr9:127663205:+ INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 KDM2B-RHOF 15 53 chr12:121494579:- chr12:121793239:- INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 PIP5K1B-PGM5 16 49 chr9:68822683:+ chr9:68465093:+ FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 DLGAP4-RGMA 18 34 chr20:36461510:+ chr15:93052507:- . NA TCGA-A5-A7WK-01A-11R-A34R-07 WDR82-UBE4B 12 44 chr3:52270712:- chr1:10072028:+ FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 NXN-SLC43A2 9 55 chr17:979319:- chr17:1615034:- INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 NTN1-RANGAP1 8 30 chr17:9023391:+ chr22:41268156:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 RARA-PLEKHA6 5 40 chr17:40331396:+ chr1:204274809:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 SMARCC2-CS 8 20 chr12:56168060:- chr12:56286645:- INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 CSNK1D-ASPSCR1 4 34 chr17:82273306:- chr17:82016941:+ FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 ZFAND3-EXD3 5 29 chr6:37929999:+ chr9:137354377:- INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 DDX39B-C6orf10 6 22 chr6:31538763:- chr6:32369983:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 STXBP1-CACNA2D2 8 10 chr9:127663353:+ chr3:50381126:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 MAP7D1-AGO3 7 12 chr1:36173478:+ chr1:36004341:+ INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 FAM174B-PHF20 5 17 chr15:92655316:- chr20:35842573:+ INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 METTL24-SLC22A16 5 16 chr6:110246132:- chr6:110457017:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 KIF1A-C2orf54 4 15 chr2:240758360:- chr2:240891763:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 FBLIM1-CELA2B 2 20 chr1:15758355:+ chr1:15476457:+ . NA TCGA-A5-A7WK-01A-11R-A34R-07 FAM102A-WDR34 3 12 chr9:127979992:- chr9:128640939:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 SFMBT1-EML1 3 11 chr3:52954317:- chr14:99891199:+ FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 DNM1L-FGD4 2 13 chr12:32733807:+ chr12:32619698:+ INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 STK38-GMDS 2 12 chr6:36499873:- chr6:1742586:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 ICK-FAM83B 2 9 chr6:53018330:- chr6:54870187:+ . NA TCGA-A5-A7WK-01A-11R-A34R-07 FBXL18-RNF216 2 6 chr7:5500488:- chr7:5652510:- INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 BAZ2B-ITGB6 1 5 chr2:159373045:- chr2:160174139:- FRAMESHIFT NA TCGA-A5-A7WK-01A-11R-A34R-07 MECOM-CLDN11 1 3 chr3:169663336:- chr3:170423163:+ INFRAME NA TCGA-A5-A7WK-01A-11R-A34R-07 ATXN3-LGMN 1 2 chr14:92070935:- chr14:92732815:- . NA TCGA-A5-A7WK-01A-11R-A34R-07 CASZ1-MTOR 1 1 chr1:10638715:- chr1:11199703:- . NA TCGA-A5-A7WK-01A-11R-A34R-07 PKD1-ZNF598 1000 1000 chr16:2135475:- chr16:1999121:- FRAMESHIFT NA TCGA-AJ-A23N-01A-11R-A22K-07 FBXO42-LAPTM5 10 29 chr1:16352255:- chr1:30742549:- . NA TCGA-AJ-A23N-01A-11R-A22K-07 UNC5A-ERGIC1 7 13 chr5:176810820:+ chr5:172950709:+ FRAMESHIFT NA TCGA-AJ-A23N-01A-11R-A22K-07 LYPD6-EPC2 7 1 chr2:149449147:+ chr2:148690214:+ FRAMESHIFT NA TCGA-AJ-A23N-01A-11R-A22K-07 NECTIN2-SOX6 1 12 chr19:44874478:+ chr11:15989230:- INFRAME NA TCGA-AJ-A23N-01A-11R-A22K-07 MRPL10-SKAP1 1 6 chr17:47826637:- chr17:48189500:- INFRAME NA TCGA-AJ-A2QM-01A-11R-A18M-07 MBP-CBLN2 25 120 chr18:77105211:- chr18:72552636:- . NA TCGA-AJ-A2QM-01A-11R-A18M-07 DIS3L2-MICU1 44 5 chr2:231961765:+ chr10:72566794:- . NA TCGA-AJ-A2QM-01A-11R-A18M-07 KCNN1-GATA6 9 32 chr19:17975187:+ chr18:22200656:+ INFRAME NA TCGA-AJ-A2QM-01A-11R-A18M-07 SREBF1-ZNF232 8 29 chr17:17836727:- chr17:5109868:- FRAMESHIFT NA TCGA-AJ-A2QM-01A-11R-A18M-07 RBFA-TXNL4A 6 33 chr18:80037506:+ chr18:79977701:- INFRAME NA TCGA-AJ-A2QM-01A-11R-A18M-07 HAPLN4-MEF2B 5 18 chr19:19260813:- chr19:19150764:- . NA TCGA-AJ-A2QM-01A-11R-A18M-07 NAPEPLD-RELN 2 20 chr7:103128483:- chr7:103503230:- INFRAME NA TCGA-AJ-A2QM-01A-11R-A18M-07 DDA1-MYO9B 3 15 chr19:17309657:+ chr19:17200639:+ FRAMESHIFT NA TCGA-AJ-A2QM-01A-11R-A18M-07 AVEN-SCG5 1 5 chr15:34003032:- chr15:32679766:+ INFRAME NA TCGA-AJ-A2QM-01A-11R-A18M-07 TK1-KMT2D 1 4 chr17:78182589:- chr12:49034299:- FRAMESHIFT Likely Oncogenic NA TCGA-AJ-A3BD-01A-11R-A19W-07 ZFP30-C19orf33 35 155 chr19:37643265:- chr19:38304375:+ INFRAME NA TCGA-AJ-A3BD-01A-11R-A19W-07 C12orf10-ESPL1 12 71 chr12:53301725:+ chr12:53292941:+ . NA TCGA-AJ-A3BD-01A-11R-A19W-07 SUPT5H-ARHGEF19 14 49 chr19:39474718:+ chr1:16199254:- FRAMESHIFT NA TCGA-AJ-A3BD-01A-11R-A19W-07 MYO1C-SMTNL2 3 26 chr17:1478616:- chr17:4607361:+ FRAMESHIFT NA TCGA-AJ-A3BD-01A-11R-A19W-07 RCN3-FLT3LG 2 5 chr19:49539179:+ chr19:49486015:+ INFRAME NA TCGA-AJ-A3BD-01A-11R-A19W-07 PGD-RBP7 1 7 chr1:10400572:+ chr1:10007570:+ FRAMESHIFT NA TCGA-AJ-A3BD-01A-11R-A19W-07 PRRG2-AGPAT2 2 3 chr19:49583304:+ chr9:136677556:- FRAMESHIFT NA TCGA-AJ-A3BD-01A-11R-A19W-07 DPYD-ALKBH3 1 6 chr1:97920884:- chr11:43901516:+ INFRAME NA TCGA-AJ-A3BD-01A-11R-A19W-07 SF3A1-PES1 1 4 chr22:30337026:- chr22:30577129:- INFRAME NA TCGA-AJ-A3BD-01A-11R-A19W-07 TBC1D16-EIF4A3 1 3 chr17:80035795:- chr17:80140140:- . NA TCGA-AJ-A3BF-01A-11R-A213-07 PRR4-DUSP16 47 157 chr12:11171422:- chr12:12521463:- . NA TCGA-AJ-A3BF-01A-11R-A213-07 USP48-INA 38 158 chr1:21782824:- chr10:103287035:+ FRAMESHIFT NA TCGA-AJ-A3BF-01A-11R-A213-07 ECE1-WNT4 33 120 chr1:21272699:- chr1:22121576:- INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 GPS1-BLVRA 16 87 chr17:82051964:+ chr7:43800465:+ FRAMESHIFT NA TCGA-AJ-A3BF-01A-11R-A213-07 CERCAM-STXBP1 14 79 chr9:128431303:+ chr9:127694994:+ FRAMESHIFT NA TCGA-AJ-A3BF-01A-11R-A213-07 HDAC7-VSTM2B 20 47 chr12:47819767:- chr19:29527211:+ INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 MRPS18A-CDIP1 10 85 chr6:43687668:- chr16:4514664:- . NA TCGA-AJ-A3BF-01A-11R-A213-07 ZNF532-NEDD4L 10 70 chr18:58918722:+ chr18:58350991:+ INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 CUEDC1-COPZ2 9 51 chr17:57885229:- chr17:48033944:- INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 LETM1-MXD4 5 44 chr4:1836429:- chr4:2258011:- FRAMESHIFT NA TCGA-AJ-A3BF-01A-11R-A213-07 GPS1-CENPX 7 21 chr17:82051964:+ chr17:82019909:- INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 RRNAD1-CTSS 4 20 chr1:156729215:+ chr1:150757980:- INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 SHANK2-PIP5KL1 6 11 chr11:71092422:- chr9:127921604:- . NA TCGA-AJ-A3BF-01A-11R-A213-07 GLS-ANKAR 2 20 chr2:190931637:+ chr2:189744742:+ FRAMESHIFT NA TCGA-AJ-A3BF-01A-11R-A213-07 SHANK2-ITPK1 4 10 chr11:71252425:- chr14:93076619:- . NA TCGA-AJ-A3BF-01A-11R-A213-07 TMEM184B-DNAH14 2 13 chr22:38272884:- chr1:225374688:+ . NA TCGA-AJ-A3BF-01A-11R-A213-07 PPCDC-CLK3 1 10 chr15:75028453:+ chr15:74627539:+ INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 LGR6-NAV1 2 4 chr1:202235993:+ chr1:201780421:+ INFRAME NA TCGA-AJ-A3BF-01A-11R-A213-07 MAST2-MMACHC 1 4 chr1:45959477:+ chr1:45507356:+ FRAMESHIFT NA TCGA-AJ-A3BG-01A-11R-A19W-07 UHRF1BP1L-PMCH 6 37 chr12:100142592:- chr12:102197709:- FRAMESHIFT NA TCGA-AJ-A3BH-01A-11R-A19W-07 FGF20-RP1 3 12 chr8:16995655:- chr8:54738943:+ INFRAME NA TCGA-AJ-A3EJ-01A-11R-A19W-07 BCAR3-ABCA4 67 166 chr1:93588977:- chr1:94029631:- INFRAME NA TCGA-AJ-A3EJ-01A-11R-A19W-07 WWP2-SNU13 5 33 chr16:69842120:+ chr22:41680364:- FRAMESHIFT NA TCGA-AJ-A3EJ-01A-11R-A19W-07 NGRN-ZNF710 4 26 chr15:90266398:+ chr15:90079660:+ FRAMESHIFT NA TCGA-AJ-A3EJ-01A-11R-A19W-07 CSNK1D-SECTM1 3 11 chr17:82273306:- chr17:82323011:- INFRAME NA TCGA-AJ-A3EJ-01A-11R-A19W-07 GSK3B-RASSF2 3 9 chr3:120093347:- chr20:4801062:- . NA TCGA-AJ-A3EJ-01A-11R-A19W-07 OSGIN1-PATZ1 1 10 chr16:83953370:+ chr22:31327309:- INFRAME NA TCGA-AJ-A3EJ-01A-11R-A19W-07 PRCC-RRNAD1 2 4 chr1:156768239:+ chr1:156731991:+ INFRAME NA TCGA-AJ-A3EJ-01A-11R-A19W-07 PSD4-ACTR3 1 4 chr2:113199226:+ chr2:113913172:+ INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 CEP70-GYG1 86 718 chr3:138571034:- chr3:149024053:+ INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 FAM222B-RAB5C 47 267 chr17:28842682:- chr17:42130590:- . NA TCGA-AJ-A3EM-01A-11R-A213-07 HMBOX1-PNOC 62 145 chr8:28890678:+ chr8:28329135:+ . NA TCGA-AJ-A3EM-01A-11R-A213-07 DEPDC5-BID 41 166 chr22:31758633:+ chr22:17750174:- INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 USP6NL-VPS26A 34 111 chr10:11501101:- chr10:69155812:+ INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 SPATA13-HSCB 13 71 chr13:24160932:+ chr22:28751241:+ . NA TCGA-AJ-A3EM-01A-11R-A213-07 ACO2-PRR5 15 62 chr22:41499862:+ chr22:44702492:+ INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 WAC-ATP5G1P1 3 99 chr10:28589851:+ chr14:105537158:- . NA TCGA-AJ-A3EM-01A-11R-A213-07 PLXNB2-TMPRSS6 1 97 chr22:50307553:- chr22:37103418:- . NA TCGA-AJ-A3EM-01A-11R-A213-07 TOB2-ACO2 9 19 chr22:41446379:- chr22:41507791:+ . NA TCGA-AJ-A3EM-01A-11R-A213-07 RASGRP1-CD47 4 33 chr15:38559821:- chr3:108080344:- INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 SUCO-DNM3 5 7 chr1:172533497:+ chr1:171987656:+ FRAMESHIFT NA TCGA-AJ-A3EM-01A-11R-A213-07 LPP-WWTR1 2 18 chr3:188225527:+ chr3:149669891:- . NA TCGA-AJ-A3EM-01A-11R-A213-07 KIF26B-UBE2Q1 2 14 chr1:245419745:+ chr1:154551819:- INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 SRGAP2-TCFL5 1 15 chr1:206206037:+ chr20:62854157:- FRAMESHIFT NA TCGA-AJ-A3EM-01A-11R-A213-07 ITCH-SRSF2 1 7 chr20:34413879:+ chr17:76734562:- . NA TCGA-AJ-A3EM-01A-11R-A213-07 GKAP1-ARIH1 1 6 chr9:83799185:- chr15:72518067:+ INFRAME NA TCGA-AJ-A3EM-01A-11R-A213-07 THADA-UBR2 1 5 chr2:43320446:- chr6:42615071:+ INFRAME NA TCGA-AJ-A3I9-01A-11R-A22K-07 RSPRY1-MT4 181 780 chr16:57186451:+ chr16:56565093:+ . NA TCGA-AJ-A3I9-01A-11R-A22K-07 ERBB3-COX4I2 38 93 chr12:56080382:+ chr20:31643404:+ INFRAME NA TCGA-AJ-A3I9-01A-11R-A22K-07 PVT1-DPY19L4 17 84 chr8:127794734:+ chr8:94777666:+ . NA TCGA-AJ-A3I9-01A-11R-A22K-07 KIF1B-SHISA4 11 55 chr1:10232434:+ chr1:201889445:+ INFRAME NA TCGA-AJ-A3I9-01A-11R-A22K-07 POLD3-PPME1 7 47 chr11:74613010:+ chr11:74203728:+ INFRAME NA TCGA-AJ-A3I9-01A-11R-A22K-07 SGPP2-TEN1 13 15 chr2:222424821:+ chr17:75986187:+ INFRAME NA TCGA-AJ-A3I9-01A-11R-A22K-07 NDUFAF6-MYC 5 34 chr8:94895927:+ chr8:127738248:+ . Likely Oncogenic NA TCGA-AJ-A3I9-01A-11R-A22K-07 CHP1-ARHGAP42 2 9 chr15:41231449:+ chr11:100959883:+ INFRAME NA TCGA-AJ-A3I9-01A-11R-A22K-07 WDR47-DECR2 2 6 chr1:109002224:- chr16:411890:+ . NA TCGA-AJ-A3I9-01A-11R-A22K-07 UBE4B-EIF2S2 1 3 chr1:10033694:+ chr20:34105545:- INFRAME NA TCGA-AJ-A3IA-01A-11R-A213-07 PEAK1-ANGPT1 10 15 chr15:77252367:- chr8:107347097:- . NA TCGA-AJ-A3IA-01A-11R-A213-07 SLC26A6-CYP2C8 6 25 chr3:48635371:- chr10:95039038:- FRAMESHIFT NA TCGA-AJ-A3IA-01A-11R-A213-07 CRAMP1-VN1R9P 7 13 chr16:1614985:+ chr22:17022021:- . NA TCGA-AJ-A3IA-01A-11R-A213-07 PCMT1-SLC22A2 6 12 chr6:149773169:+ chr6:160171437:- . NA TCGA-AJ-A3IA-01A-11R-A213-07 BTBD3-CCDC126 4 16 chr20:11890954:+ chr7:23642931:+ . NA TCGA-AJ-A3IA-01A-11R-A213-07 CCDC126-BTBD3 3 5 chr7:23611553:+ chr20:11918334:+ INFRAME NA TCGA-AJ-A3IA-01A-11R-A213-07 PHF3-ENPP3 2 9 chr6:63646795:+ chr6:131637235:+ . NA TCGA-AJ-A3IA-01A-11R-A213-07 FAM49B-MGAM 1 12 chr8:129903312:- chr7:142005529:+ . NA TCGA-AJ-A3IA-01A-11R-A213-07 SENP6-KATNA1 2 6 chr6:75647801:+ chr6:149638560:- . NA TCGA-AJ-A3IA-01A-11R-A213-07 ELOVL2-SMOC2 2 4 chr6:11044228:- chr6:168650681:+ FRAMESHIFT NA TCGA-AJ-A3IA-01A-11R-A213-07 FAM135A-ADGRG5 2 4 chr6:70502791:+ chr16:57562056:+ . NA TCGA-AJ-A3IA-01A-11R-A213-07 BTBD3-FAM221A 2 2 chr20:11890954:+ chr7:23689269:+ . NA TCGA-AJ-A3IA-01A-11R-A213-07 SASH1-PLN 1 6 chr6:148343223:+ chr6:118558825:+ . NA TCGA-AJ-A3IA-01A-11R-A213-07 CENPW-PDE10A 1 5 chr6:126346318:+ chr6:165396459:- INFRAME NA TCGA-AJ-A3IA-01A-11R-A213-07 GINM1-SLC35F1 1 4 chr6:149572603:+ chr6:118235509:+ INFRAME NA TCGA-AJ-A3NF-01A-11R-A22K-07 PRR5L-ITPA 14 70 chr11:36403378:+ chr20:3221841:+ FRAMESHIFT NA TCGA-AJ-A3NF-01A-11R-A22K-07 HADH-HPGD 9 36 chr4:107990064:+ chr4:174508792:- INFRAME NA TCGA-AJ-A3NF-01A-11R-A22K-07 TATDN1-CCT2 6 7 chr8:124539025:- chr12:69586270:+ FRAMESHIFT NA TCGA-AJ-A3NF-01A-11R-A22K-07 MYO5C-HAUS8 3 15 chr15:52244356:- chr19:17052966:- FRAMESHIFT NA TCGA-AJ-A3NF-01A-11R-A22K-07 CENPS-PGD 4 9 chr1:10440413:+ chr1:10413062:+ INFRAME NA TCGA-AJ-A3NF-01A-11R-A22K-07 RIF1-PDE11A 3 9 chr2:151462466:+ chr2:177728172:- INFRAME NA TCGA-AJ-A3NF-01A-11R-A22K-07 LIMA1-ANO6 1 4 chr12:50248633:- chr12:45302014:+ FRAMESHIFT NA TCGA-AJ-A3OJ-01A-11R-A22K-07 SOCS5-MSH2 3 12 chr2:46699449:+ chr2:47429742:+ . Likely Oncogenic NA TCGA-AJ-A3QS-01A-11R-A22K-07 LDHB-CTNNA2 36 181 chr12:21637071:- chr2:80393211:+ INFRAME NA TCGA-AJ-A3QS-01A-11R-A22K-07 SKIV2L-HCP5 21 44 chr6:31967377:+ chr6:31477027:+ . NA TCGA-AJ-A3QS-01A-11R-A22K-07 GABPA-JAM2 16 63 chr21:25741675:+ chr21:25705979:+ FRAMESHIFT NA TCGA-AJ-A3QS-01A-11R-A22K-07 MBOAT2-IGSF1 5 20 chr2:9003540:- chrX:131289275:- . NA TCGA-AJ-A3QS-01A-11R-A22K-07 FAM60A-PLEKHA5 1 28 chr12:31326024:- chr12:19320562:+ . NA TCGA-AJ-A3QS-01A-11R-A22K-07 STIM1-GPR160 2 15 chr11:3856409:+ chr3:170079774:+ . NA TCGA-AJ-A3QS-01A-11R-A22K-07 TMEM63B-EFCAB14 3 5 chr6:44127866:+ chr1:46691937:- . NA TCGA-AJ-A3QS-01A-11R-A22K-07 SSBP4-SLC5A5 3 4 chr19:18433817:+ chr19:17883850:+ INFRAME NA TCGA-AJ-A3QS-01A-11R-A22K-07 CCZ1B-NAA11 2 7 chr7:6811952:- chr4:79226270:- . NA TCGA-AJ-A3QS-01A-11R-A22K-07 EFCAB11-TTC7B 2 4 chr14:89931541:- chr14:90578308:- FRAMESHIFT NA TCGA-AJ-A3QS-01A-11R-A22K-07 ITGB5-SLC12A8 2 3 chr3:124886931:- chr3:125120686:- INFRAME NA TCGA-AJ-A3QS-01A-11R-A22K-07 IPP-SLC22A7 1 6 chr1:45700070:- chr6:43298620:+ FRAMESHIFT NA TCGA-AJ-A3QS-01A-11R-A22K-07 ADAM22-RUNDC3B 1 4 chr7:87978412:+ chr7:87816141:+ INFRAME NA TCGA-AJ-A3QS-01A-11R-A22K-07 CYTH3-SPARCL1 1 2 chr7:6272474:- chr4:87499585:- . NA TCGA-AJ-A3QS-01A-11R-A22K-07 ZBTB8A-TINAGL1 1 2 chr1:32553540:+ chr1:31584678:+ . NA TCGA-AJ-A3TW-01A-11R-A22K-07 STX5-PPP1R14B 28 182 chr11:62824217:- chr11:64244495:- . NA TCGA-AJ-A3TW-01A-11R-A22K-07 ESRRA-ZNF317 15 148 chr11:64315968:+ chr19:9163056:+ . NA TCGA-AJ-A3TW-01A-11R-A22K-07 PARD3-IL2RA 11 15 chr10:34516979:- chr10:6026025:- INFRAME NA TCGA-AJ-A3TW-01A-11R-A22K-07 ZNF222-PSG5 5 39 chr19:44027490:+ chr19:43185147:- INFRAME NA TCGA-AJ-A3TW-01A-11R-A22K-07 ZNF559-FAM129C 7 28 chr19:9324780:+ chr19:17527269:+ FRAMESHIFT NA TCGA-AJ-A3TW-01A-11R-A22K-07 ILF2-KCNN3 2 20 chr1:153669836:- chr1:154737088:- FRAMESHIFT NA TCGA-AJ-A3TW-01A-11R-A22K-07 FARS2-DTNBP1 3 12 chr6:5613320:+ chr6:15593081:- INFRAME NA TCGA-AJ-A3TW-01A-11R-A22K-07 PSAP-PCID2 3 8 chr10:71851182:- chr13:113200516:- FRAMESHIFT NA TCGA-AJ-A3TW-01A-11R-A22K-07 SEMA3B-GNAI2 3 8 chr3:50274057:+ chr3:50252100:+ FRAMESHIFT NA TCGA-AJ-A3TW-01A-11R-A22K-07 ESCO1-SNRPD1 1 1 chr18:21600623:- chr18:21622725:+ . NA TCGA-AJ-A6NU-01A-11R-A34R-07 ARPC1B-TRRAP 20 31 chr7:99374781:+ chr7:98988765:+ . NA TCGA-AJ-A6NU-01A-11R-A34R-07 PVT1-CFTR 6 74 chr8:127794734:+ chr7:117559464:+ . NA TCGA-AJ-A6NU-01A-11R-A34R-07 USP34-KDM4B 12 39 chr2:61470650:- chr19:5119118:+ FRAMESHIFT NA TCGA-AJ-A6NU-01A-11R-A34R-07 ZNF618-TMEM94 3 34 chr9:113876413:+ chr17:75471800:+ . NA TCGA-AJ-A6NU-01A-11R-A34R-07 NUDC-IGFN1 4 26 chr1:26924166:+ chr1:201193247:+ . NA TCGA-AJ-A6NU-01A-11R-A34R-07 UBE2L3-LLGL2 10 2 chr22:21567771:+ chr17:75543397:+ . NA TCGA-AJ-A6NU-01A-11R-A34R-07 ANXA4-BCAR4 5 17 chr2:69742175:+ chr16:11820297:- . NA TCGA-AJ-A6NU-01A-11R-A34R-07 BRAP-CFAP65 1 12 chr12:111679151:- chr2:219019719:- FRAMESHIFT NA TCGA-AP-A5FX-01A-11R-A27V-07 NOTCH2-SEC22B 10 63 chr1:119986960:- chr1:120160530:- INFRAME NA TCGA-AP-A5FX-01A-11R-A27V-07 ZNF564-CACNA1A 10 35 chr19:12551330:- chr19:13519503:- FRAMESHIFT NA TCGA-AP-A5FX-01A-11R-A27V-07 EDEM1-ITPR1 9 12 chr3:5195281:+ chr3:4846139:+ INFRAME NA TCGA-AP-A5FX-01A-11R-A27V-07 ACP2-MRPL48 3 30 chr11:47245305:- chr11:73844807:+ INFRAME NA TCGA-AP-A5FX-01A-11R-A27V-07 MYO6-DEPTOR 2 17 chr6:75817664:+ chr8:119965232:+ FRAMESHIFT NA TCGA-AP-A5FX-01A-11R-A27V-07 MARVELD2-PIK3R1 1 13 chr5:69424636:+ chr5:68293709:+ INFRAME Likely Oncogenic NA TCGA-AP-A5FX-01A-11R-A27V-07 PTGR1-PTBP3 3 3 chr9:111597317:- chr9:112297916:- FRAMESHIFT NA TCGA-AP-A5FX-01A-11R-A27V-07 CPAMD8-LILRB3 2 4 chr19:16896176:- chr19:54218413:- INFRAME NA TCGA-AP-A5FX-01A-11R-A27V-07 SMARCC1-SYCP2L 2 4 chr3:47772817:- chr6:10942677:+ INFRAME NA TCGA-AP-A5FX-01A-11R-A27V-07 ARAP3-CTBP2 2 1 chr5:141666424:- chr10:124989698:- FRAMESHIFT NA TCGA-AP-A5FX-01A-11R-A27V-07 RPS29-RPL36AL 1 2 chr14:49585950:- chr14:49619140:- . NA TCGA-AP-A5FX-01A-11R-A27V-07 TPM3-C1orf189 1 1 chr1:154182988:- chr1:154200588:- FRAMESHIFT NA TCGA-AX-A2H4-01A-21R-A18M-07 PAPOLA-GSKIP 19 28 chr14:96502600:+ chr14:96379688:+ . NA TCGA-AX-A2H4-01A-21R-A18M-07 HOXB-AS3-MAPT 3 50 chr17:48590589:+ chr17:46010310:+ . NA TCGA-AX-A2H4-01A-21R-A18M-07 CSNK1E-DMC1 4 40 chr22:38298786:- chr22:38562369:- INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 APOPT1-MARK3 7 19 chr14:103563124:+ chr14:103491777:+ FRAMESHIFT NA TCGA-AX-A2H4-01A-21R-A18M-07 SRPK2-KIF12 3 11 chr7:105388648:- chr9:114099169:- INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 SBNO2-CACNA2D2 1 16 chr19:1132090:- chr3:50434429:- INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 STX8-YWHAEP7 3 6 chr17:9378552:- chr17:37828964:- . NA TCGA-AX-A2H4-01A-21R-A18M-07 PABPC1L-PKIG 2 8 chr20:44933185:+ chr20:44598616:+ . NA TCGA-AX-A2H4-01A-21R-A18M-07 NACC2-LHX3 3 3 chr9:136049636:- chr9:136200753:- INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 PSMB5-HOMEZ 1 11 chr14:23033368:- chr14:23277187:- INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 FAM168A-C2CD3 2 5 chr11:73597923:- chr11:74013525:- . NA TCGA-AX-A2H4-01A-21R-A18M-07 PTK2-MKLN1 2 5 chr8:140735251:- chr7:131463217:+ INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 SRPK2-EFCAB10 2 5 chr7:105388648:- chr7:105569571:- FRAMESHIFT NA TCGA-AX-A2H4-01A-21R-A18M-07 DGCR8-CCL4L2 1 8 chr22:20080383:+ chr17:36211776:+ . NA TCGA-AX-A2H4-01A-21R-A18M-07 TRPV3-UBE2G1 1 8 chr17:3542522:- chr17:4289408:- INFRAME NA TCGA-AX-A2H4-01A-21R-A18M-07 MPND-CCDC94 2 3 chr19:4358172:+ chr19:4251027:+ FRAMESHIFT NA TCGA-AX-A2H4-01A-21R-A18M-07 RNF115-LIX1L 1 3 chr1:145784539:- chr1:145947782:- FRAMESHIFT NA TCGA-AX-A2H4-01A-21R-A18M-07 SPON1-CD47 1 3 chr11:14041654:+ chr3:108080344:- FRAMESHIFT NA TCGA-AX-A2H4-01A-21R-A18M-07 PRKRIP1-SH2B2 1 1 chr7:102397698:+ chr7:102320331:+ FRAMESHIFT NA TCGA-AX-A3FV-01A-11R-A22K-07 RBM28-KMT2C 7 90 chr7:128330819:- chr7:152185631:- INFRAME Likely Oncogenic NA TCGA-AX-A3FV-01A-11R-A22K-07 ETFRF1-LRMP 7 19 chr12:25204007:+ chr12:25096910:+ INFRAME NA TCGA-AX-A3FV-01A-11R-A22K-07 PABPC1-ZFPM2 7 16 chr8:100721391:- chr8:105419144:+ INFRAME NA TCGA-AX-A3FV-01A-11R-A22K-07 WWP2-TANGO6 4 10 chr16:69842120:+ chr16:69022828:+ FRAMESHIFT NA TCGA-AX-A3FV-01A-11R-A22K-07 BAHCC1-CCDC137 2 11 chr17:81426979:+ chr17:81667729:+ FRAMESHIFT NA TCGA-AX-A3FW-01A-11R-A22K-07 MAML3-GTSF1 11 39 chr4:140152860:- chr12:54463297:- INFRAME NA TCGA-AX-A3FW-01A-11R-A22K-07 GIGYF2-SP2 5 8 chr2:232806657:+ chr17:47915312:+ FRAMESHIFT NA TCGA-AX-A3FW-01A-11R-A22K-07 PHF21B-WNT7B 5 5 chr22:45008545:- chr22:45931369:- FRAMESHIFT NA TCGA-AX-A3FW-01A-11R-A22K-07 DRAIC-AAAS 2 13 chr15:69468393:+ chr12:53309721:- . NA TCGA-AX-A3FW-01A-11R-A22K-07 SOS1-DTL 2 8 chr2:39022570:- chr1:212078173:+ FRAMESHIFT NA TCGA-AX-A3FW-01A-11R-A22K-07 CWH43-OCIAD1 1 10 chr4:49050849:+ chr4:48860725:+ FRAMESHIFT NA TCGA-AX-A3FW-01A-11R-A22K-07 FAM208A-TADA3 2 3 chr3:56660731:- chr3:9791493:- . NA TCGA-AX-A3FW-01A-11R-A22K-07 ASXL2-HADHA 1 1 chr2:25799385:- chr2:26209889:- FRAMESHIFT Likely Oncogenic NA TCGA-AX-A3FX-01A-11R-A22K-07 TNRC18-RNF216 12 65 chr7:5407150:- chr7:5641376:- . NA TCGA-AX-A3FX-01A-11R-A22K-07 ZNF516-MBP 8 50 chr18:76490681:- chr18:76990060:- . NA TCGA-AX-A3FX-01A-11R-A22K-07 SUGP1-MEX3D 2 7 chr19:19296989:- chr19:1556923:- INFRAME NA TCGA-AX-A3FX-01A-11R-A22K-07 MBTPS1-CDH5 2 6 chr16:84063305:- chr16:66388324:+ INFRAME NA TCGA-AX-A3FX-01A-11R-A22K-07 CCNYL1-FRMD4B 1 9 chr2:207742342:+ chr3:69377119:- . NA TCGA-AX-A3FX-01A-11R-A22K-07 SETD2-KIF9 1 6 chr3:47163854:- chr3:47275490:- FRAMESHIFT Likely Oncogenic NA TCGA-AX-A3FX-01A-11R-A22K-07 FOXK2-HEXDC 1 4 chr17:82563548:+ chr17:82424394:+ FRAMESHIFT NA TCGA-AX-A3FZ-01A-11R-A22K-07 NKD2-ICE1 2 7 chr5:1009560:+ chr5:5454552:+ FRAMESHIFT NA TCGA-AX-A3G1-01A-11R-A22K-07 TMC5-C16orf62 1 14 chr16:19430640:+ chr16:19682225:+ . NA TCGA-AX-A3G1-01A-11R-A22K-07 PDE12-KCNJ4 2 6 chr3:57559388:+ chr22:38428171:- . NA TCGA-AX-A3G1-01A-11R-A22K-07 ESCO1-ABHD3 1 9 chr18:21573314:- chr18:21659343:- FRAMESHIFT NA TCGA-AX-A3G1-01A-11R-A22K-07 INVS-RPA3 1 4 chr9:100126549:+ chr7:7641175:- . NA TCGA-AX-A3G4-01A-11R-A213-07 MYO9A-PARP6 29 156 chr15:72117680:- chr15:72242699:- . NA TCGA-AX-A3G4-01A-11R-A213-07 TAX1BP1-GPX4 7 52 chr7:27740269:+ chr19:1105186:+ . NA TCGA-AX-A3G4-01A-11R-A213-07 FOCAD-CD2 10 39 chr9:20823115:+ chr1:116760402:+ FRAMESHIFT NA TCGA-AX-A3G4-01A-11R-A213-07 EP300-PAICS 10 35 chr22:41117821:+ chr4:56459372:+ FRAMESHIFT Likely Oncogenic NA TCGA-AX-A3G4-01A-11R-A213-07 CTDSPL2-FBXO42 3 13 chr15:44427772:+ chr1:16294917:- . NA TCGA-AX-A3G4-01A-11R-A213-07 NIPBL-SPEF2 2 8 chr5:36877178:+ chr5:35753624:+ . NA TCGA-AX-A3G4-01A-11R-A213-07 RPTOR-FAHD2B 2 4 chr17:80625793:+ chr2:97091712:- . NA TCGA-AX-A3G4-01A-11R-A213-07 C20orf196-ORAOV1 2 1 chr20:5773043:+ chr11:69671819:- FRAMESHIFT NA TCGA-AX-A3G6-01A-11R-A213-07 CFAP36-ACYP2 20 79 chr2:55533960:+ chr2:54304688:+ INFRAME NA TCGA-AX-A3G6-01A-11R-A213-07 AGPAT3-PDE9A 5 25 chr21:43904019:+ chr21:42686192:+ . NA TCGA-AX-A3G6-01A-11R-A213-07 MECOM-C5orf67 2 6 chr3:169663336:- chr5:56535228:- FRAMESHIFT NA TCGA-AX-A3G7-01A-12R-A213-07 PCMT1-HSP90B1 6 1 chr6:149793669:+ chr12:103946856:+ INFRAME NA TCGA-AX-A3G7-01A-12R-A213-07 ATP2B4-TFEB 3 4 chr1:203727571:+ chr6:41691235:- FRAMESHIFT NA TCGA-AX-A3GI-01A-11R-A213-07 G3BP1-LMNB1 35 104 chr5:151772036:+ chr5:126804776:+ . NA TCGA-AX-A3GI-01A-11R-A213-07 CMIP-SUGP2 9 29 chr16:81445541:+ chr19:19010342:- FRAMESHIFT NA TCGA-AX-A3GI-01A-11R-A213-07 FAM168A-PARVA 7 29 chr11:73597923:- chr11:12473745:+ . NA TCGA-AX-A3GI-01A-11R-A213-07 ATXN10-PGR 4 16 chr22:45740538:+ chr11:101091876:- FRAMESHIFT NA TCGA-AX-A3GI-01A-11R-A213-07 PRPF39-FANCM 2 24 chr14:45084249:+ chr14:45196172:+ . NA TCGA-AX-A3GI-01A-11R-A213-07 RMDN3-SMIM14 2 19 chr15:40751426:- chr4:39572463:- FRAMESHIFT NA TCGA-AX-A3GI-01A-11R-A213-07 ATAD2-WDYHV1 3 11 chr8:123396187:- chr8:123427924:+ FRAMESHIFT NA TCGA-AX-A3GI-01A-11R-A213-07 BIRC6-SLC30A6 2 15 chr2:32357486:+ chr2:32171287:+ FRAMESHIFT NA TCGA-AX-A3GI-01A-11R-A213-07 SEC31A-EIF4G3 1 6 chr4:82842140:- chr1:21050994:- FRAMESHIFT NA TCGA-B5-A0JN-01A-11R-A104-07 KLC1-MARK3 18 22 chr14:103629494:+ chr14:103502882:+ . NA TCGA-B5-A0JN-01A-11R-A104-07 AP2A2-VPS26A 11 38 chr11:959505:+ chr10:69155812:+ FRAMESHIFT NA TCGA-B5-A0JN-01A-11R-A104-07 ASRGL1-CPSF7 9 34 chr11:62357144:+ chr11:61421608:- FRAMESHIFT NA TCGA-B5-A0JN-01A-11R-A104-07 CAPZB-CENPS 3 21 chr1:19485436:- chr1:10440347:+ FRAMESHIFT NA TCGA-B5-A0JN-01A-11R-A104-07 PEX14-KIF1B 6 5 chr1:10475002:+ chr1:10374316:+ FRAMESHIFT NA TCGA-B5-A0JN-01A-11R-A104-07 DNAJA3-ZDHHC16 3 7 chr16:4448848:+ chr10:97451671:+ . NA TCGA-B5-A0JN-01A-11R-A104-07 HOOK1-FGGY 4 3 chr1:59828852:+ chr1:59757931:+ INFRAME NA TCGA-B5-A0JN-01A-11R-A104-07 TMEM184B-SUN2 2 7 chr22:38272884:- chr22:38745811:- . NA TCGA-B5-A0JN-01A-11R-A104-07 PHF8-FAM120C 1 5 chrX:54042631:- chrX:54073287:- INFRAME NA TCGA-B5-A0JN-01A-11R-A104-07 EXOC2-RNF144B 1 4 chr6:532469:- chr6:18439684:+ FRAMESHIFT NA TCGA-B5-A0JN-01A-11R-A104-07 TLN2-RPS27L 1 1 chr15:62390685:+ chr15:63156521:- . NA TCGA-B5-A0K9-01A-21R-A104-07 PLEKHG5-DNAJC11 1 10 chr1:6496493:- chr1:6654287:- . NA TCGA-B5-A1MS-01B-11R-A22K-07 CC2D1A-RLN3 17 60 chr19:13913638:+ chr19:14030710:+ INFRAME NA TCGA-B5-A1MS-01B-11R-A22K-07 GATAD2B-LAMC3 9 21 chr1:153922733:- chr9:131061035:+ . NA TCGA-B5-A1MS-01B-11R-A22K-07 LRBA-DLG2 5 20 chr4:150349992:- chr11:84059484:- FRAMESHIFT NA TCGA-B5-A1MS-01B-11R-A22K-07 ADCY9-FAM65C 1 12 chr16:4113750:- chr20:50630856:- . NA TCGA-B5-A1MS-01B-11R-A22K-07 LARS2-SACM1L 2 4 chr3:45458886:+ chr3:45713137:+ INFRAME NA TCGA-B5-A1MS-01B-11R-A22K-07 TBC1D22A-GTSE1 2 4 chr22:47037198:+ chr22:46308150:+ FRAMESHIFT NA TCGA-B5-A1MS-01B-11R-A22K-07 ESCO1-ABHD3 1 5 chr18:21560859:- chr18:21664230:- INFRAME NA TCGA-B5-A1MS-01B-11R-A22K-07 KANSL3-SHE 1 5 chr2:96601643:- chr1:154499238:- INFRAME NA TCGA-B5-A1MS-01B-11R-A22K-07 MACROD2-DGAT2 1 4 chr20:15230061:+ chr11:75784618:+ FRAMESHIFT NA TCGA-B5-A1MS-01B-11R-A22K-07 PLRG1-SRGAP2B 1 2 chr4:154550300:- chr1:144995200:- FRAMESHIFT NA TCGA-B5-A1MS-01B-11R-A22K-07 EED-HIKESHI 1000 1000 chr11:86277991:+ chr11:86337379:+ FRAMESHIFT NA TCGA-B5-A1MW-01A-11R-A32Y-07 NCALD-RRM2B 4 9 chr8:101915809:- chr8:102232304:- . NA TCGA-B5-A1MW-01A-11R-A32Y-07 SUSD6-PLEKHD1 2 17 chr14:69611828:+ chr14:69500115:+ . NA TCGA-B5-A3FB-01A-11R-A19W-07 CDKN1A-ERAS 592 2028 chr6:36678798:+ chrX:48829081:+ . Likely Oncogenic NA TCGA-B5-A3FB-01A-11R-A19W-07 ABCG1-BACE2 3 32 chr21:42288312:+ chr21:41226266:+ INFRAME NA TCGA-B5-A3FB-01A-11R-A19W-07 ZMYND8-TFE3 1 26 chr20:47221314:- chrX:49039410:- FRAMESHIFT NA TCGA-B5-A3FB-01A-11R-A19W-07 SLC37A4-HYOU1 3 15 chr11:119030186:- chr11:119048315:- . NA TCGA-B5-A3FB-01A-11R-A19W-07 ACOX1-SRP68 3 8 chr17:75955566:- chr17:76064171:- FRAMESHIFT NA TCGA-B5-A3FB-01A-11R-A19W-07 MARK2-C11orf84 1 9 chr11:63839560:+ chr11:63817805:+ FRAMESHIFT NA TCGA-B5-A3FB-01A-11R-A19W-07 NFAT5-PITPNM2 1 5 chr16:69566374:+ chr12:123034685:- . NA TCGA-B5-A3FB-01A-11R-A19W-07 NCOA3-KCTD20 1000 1000 chr20:47502019:+ chr6:36470052:+ . NA TCGA-B5-A3FD-01A-11R-A19W-07 PFKFB4-UQCRC1 2 19 chr3:48539697:- chr3:48601467:- FRAMESHIFT NA TCGA-B5-A3FH-01A-11R-A19W-07 CHIC1-CDX4 7 72 chrX:73584572:+ chrX:73453517:+ FRAMESHIFT NA TCGA-B5-A3FH-01A-11R-A19W-07 GPCPD1-CASC20 2 19 chr20:5575413:- chr20:6446723:+ . NA TCGA-B5-A3FH-01A-11R-A19W-07 PIGU-C20orf85 3 8 chr20:34657180:- chr20:58153544:+ FRAMESHIFT NA TCGA-B5-A3S1-01A-11R-A22K-07 KIF9-GYG1 17 38 chr3:47282495:- chr3:149024053:+ . NA TCGA-B5-A3S1-01A-11R-A22K-07 UBR2-KANK2 6 45 chr6:42564397:+ chr19:11176817:- FRAMESHIFT NA TCGA-B5-A3S1-01A-11R-A22K-07 NDUFS7-STK11 6 13 chr19:1388593:+ chr19:1222985:+ INFRAME Likely Oncogenic NA TCGA-B5-A3S1-01A-11R-A22K-07 TNRC18-RNF216 1 28 chr7:5359398:- chr7:5725438:- INFRAME NA TCGA-B5-A3S1-01A-11R-A22K-07 SAE1-RPA2 3 12 chr19:47155213:+ chr1:27907282:- INFRAME NA TCGA-B5-A3S1-01A-11R-A22K-07 ERBB2-IKZF3 3 7 chr17:39723660:+ chr17:39788374:- FRAMESHIFT NA TCGA-B5-A3S1-01A-11R-A22K-07 FAM168A-P4HA3 2 11 chr11:73597923:- chr11:74289130:- . NA TCGA-B5-A3S1-01A-11R-A22K-07 SUFU-GBF1 2 4 chr10:102550106:+ chr10:102351256:+ INFRAME NA TCGA-B5-A3S1-01A-11R-A22K-07 PPP1R37-BCL3 1 5 chr19:45093527:+ chr19:44751227:+ INFRAME NA TCGA-B5-A3S1-01A-11R-A22K-07 AARS-PPP1R13B 1 3 chr16:70258980:- chr14:103742823:- FRAMESHIFT NA TCGA-B5-A3S1-01A-11R-A22K-07 SAE1-TBKBP1 1 3 chr19:47155213:+ chr17:47708394:+ FRAMESHIFT NA TCGA-B5-A3S1-01A-11R-A22K-07 KLC1-MARK3 1 2 chr14:103657776:+ chr14:103502882:+ FRAMESHIFT NA TCGA-B5-A5OD-01A-11R-A31O-07 USP54-PSMA6 108 403 chr10:73571421:- chr14:35317249:+ INFRAME NA TCGA-B5-A5OD-01A-11R-A31O-07 PPFIA1-CD82 33 100 chr11:70272436:+ chr11:44587475:+ INFRAME NA TCGA-B5-A5OD-01A-11R-A31O-07 MED25-CCDC155 25 122 chr19:49832415:+ chr19:49406886:+ INFRAME NA TCGA-B5-A5OD-01A-11R-A31O-07 ALAS1-RBM6 33 76 chr3:52208247:+ chr3:50075201:+ FRAMESHIFT NA TCGA-B5-A5OD-01A-11R-A31O-07 SNHG19-RAB26 6 127 chr16:2154860:- chr16:2149941:+ . NA TCGA-B5-A5OD-01A-11R-A31O-07 PPT2-TNF 14 37 chr6:32154404:+ chr6:31576534:+ . NA TCGA-B5-A5OD-01A-11R-A31O-07 PPT2-EGFL8-TNF 14 36 chr6:32154404:+ chr6:31576534:+ . NA TCGA-B5-A5OD-01A-11R-A31O-07 SUCO-SND1 14 29 chr1:172533497:+ chr7:128074502:+ FRAMESHIFT NA TCGA-B5-A5OD-01A-11R-A31O-07 ANKRD11-SPIRE2 6 16 chr16:89418284:- chr16:89845322:+ . NA TCGA-B5-A5OD-01A-11R-A31O-07 MEST-STRIP2 4 15 chr7:130503996:+ chr7:129480785:+ FRAMESHIFT NA TCGA-B5-A5OD-01A-11R-A31O-07 WIPF2-NFAM1 5 10 chr17:40219492:+ chr22:42411736:- . NA TCGA-B5-A5OD-01A-11R-A31O-07 HMGA2-C10orf11 1 20 chr12:65838569:+ chr10:76557209:+ FRAMESHIFT NA TCGA-B5-A5OD-01A-11R-A31O-07 CDKN2D-HM13 5 3 chr19:10568947:- chr20:31566210:+ . NA TCGA-B5-A5OD-01A-11R-A31O-07 RABL2A-IL1RN 1 8 chr2:113628713:+ chr2:113111116:+ . NA TCGA-B5-A5OD-01A-11R-A31O-07 HOXB3-FAP 1 6 chr17:48573837:- chr2:162189754:- INFRAME NA TCGA-B5-A5OD-01A-11R-A31O-07 TCF20-RRAS 1 6 chr22:42343479:- chr19:49636926:- . NA TCGA-B5-A5OD-01A-11R-A31O-07 STIP1-RTN3 1000 1000 chr11:64200293:+ chr11:63749991:+ FRAMESHIFT NA TCGA-B5-A5OE-01A-11R-A31O-07 FBXL20-GSDMB 9 56 chr17:39343180:- chr17:39917321:- . NA TCGA-B5-A5OE-01A-11R-A31O-07 MED26-ZNF99 10 29 chr19:16627872:- chr19:22769324:- INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 PVR-ZNF233 9 32 chr19:44647570:+ chr19:44264314:+ INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 RAD52-RIMKLB 7 12 chr12:949602:- chr12:8773321:+ . NA TCGA-B5-A5OE-01A-11R-A31O-07 ZNF429-LSM14A 1 19 chr19:21505774:+ chr19:34227365:+ INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 ZNF563-FDX2 2 13 chr19:12333480:- chr19:10310940:- FRAMESHIFT NA TCGA-B5-A5OE-01A-11R-A31O-07 STXBP1-LRSAM1 1 16 chr9:127676753:+ chr9:127479839:+ INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 BCL7A-GLTSCR1 3 7 chr12:122054926:+ chr19:47694115:+ INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 TARBP1-LYST 3 7 chr1:234446803:- chr1:235664621:- INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 RIMKLB-KMT5A 3 6 chr12:8754093:+ chr12:123389433:+ INFRAME NA TCGA-B5-A5OE-01A-11R-A31O-07 STX10-C3P1 1 12 chr19:13149029:- chr19:10049996:+ . NA TCGA-B5-A5OE-01A-11R-A31O-07 ZNF823-SIPA1L3 2 5 chr19:11738817:- chr19:38029089:+ . NA TCGA-B5-A5OE-01A-11R-A31O-07 CARM1-ZBTB32 1 1 chr19:10871922:+ chr19:35715757:+ FRAMESHIFT NA TCGA-B5-A5OE-01A-11R-A31O-07 ZSWIM4-FAM98C 1000 1000 chr19:13805101:+ chr19:38403135:+ . NA TCGA-BG-A3PP-01A-11R-A22K-07 SART3-DAO 37 154 chr12:108545139:- chr12:108876670:+ . NA TCGA-BG-A3PP-01A-11R-A22K-07 STAG1-FAM168A 17 36 chr3:136752195:- chr11:73468492:- . NA TCGA-BG-A3PP-01A-11R-A22K-07 SLC38A10-OGFOD3 12 32 chr17:81270918:- chr17:82398319:- INFRAME NA TCGA-BG-A3PP-01A-11R-A22K-07 VAX2-PAIP2B 7 42 chr2:70900868:+ chr2:71202600:- . NA TCGA-BG-A3PP-01A-11R-A22K-07 ANKRD27-SLC7A9 3 35 chr19:32644325:- chr19:32830684:- FRAMESHIFT NA TCGA-BG-A3PP-01A-11R-A22K-07 AKT2-YIF1B 4 29 chr19:40285181:- chr19:38309643:- . Likely Oncogenic NA TCGA-BG-A3PP-01A-11R-A22K-07 FCHSD2-ARHGEF17 6 21 chr11:72867865:- chr11:73346883:+ INFRAME NA TCGA-BG-A3PP-01A-11R-A22K-07 PPP2R1A-ZNF610 4 9 chr19:52225808:+ chr19:52365698:+ INFRAME NA TCGA-BG-A3PP-01A-11R-A22K-07 DCAF1-C2CD3 3 5 chr3:51499873:- chr11:74139828:- . NA TCGA-BG-A3PP-01A-11R-A22K-07 EPHA2-MRPL37 1 11 chr1:16148378:- chr1:54205018:+ INFRAME NA TCGA-BG-A3PP-01A-11R-A22K-07 WASF2-VANGL1 2 3 chr1:27489986:- chr1:115651277:+ . NA TCGA-BG-A3PP-01A-11R-A22K-07 HOOK1-IVD 1 4 chr1:59821943:+ chr15:40435417:+ INFRAME NA TCGA-BG-A3PP-01A-11R-A22K-07 PPA2-INTS12 1 3 chr4:105386567:- chr4:105700014:- INFRAME NA TCGA-BG-A3PP-01A-11R-A22K-07 GATAD2A-SSBP4 1 2 chr19:19386138:+ chr19:18427351:+ . NA TCGA-BK-A0CA-01A-21R-A277-07 RNF26-FOXR1 9 44 chr11:119334618:+ chr11:118971818:+ . NA TCGA-BK-A0CA-01A-21R-A277-07 NCALD-UBR5 1 2 chr8:102020237:- chr8:102361626:- . NA TCGA-BK-A0CC-01A-21R-A277-07 SHROOM4-ARID3A 29 37 chrX:50813902:- chr19:960092:+ INFRAME NA TCGA-BK-A0CC-01A-21R-A277-07 LAD1-PKP1 4 15 chr1:201386622:- chr1:201331424:+ . NA TCGA-BK-A0CC-01A-21R-A277-07 URI1-ARHGAP33 2 7 chr19:29942664:+ chr19:35784172:+ FRAMESHIFT NA TCGA-BK-A0CC-01A-21R-A277-07 PCMTD1-ST18 1 7 chr8:51898930:- chr8:52172583:- FRAMESHIFT NA TCGA-BK-A0CC-01A-21R-A277-07 ATP6V1H-RORC 2 2 chr8:53841578:- chr1:151817280:- FRAMESHIFT NA TCGA-BK-A0CC-01A-21R-A277-07 ATG7-SLC6A1 1 2 chr3:11272430:+ chr3:11015672:+ . NA TCGA-BK-A139-01A-11R-A277-07 POLR2B-FIP1L1 13 28 chr4:56979004:+ chr4:53442653:+ INFRAME NA TCGA-BK-A139-01A-11R-A277-07 DLG3-UNC5D 7 25 chrX:70479264:+ chr8:35748527:+ INFRAME NA TCGA-BK-A139-01A-11R-A277-07 UBA3-FRMD4B 2 7 chr3:69071535:- chr3:69176656:- FRAMESHIFT NA TCGA-BK-A139-01A-11R-A277-07 CIPC-LRRC74A 2 3 chr14:77098361:+ chr14:76852365:+ . NA TCGA-BK-A139-01A-11R-A277-07 SLC2A12-SGK1 2 3 chr6:134028381:- chr6:134262148:- FRAMESHIFT NA TCGA-BK-A139-01A-11R-A277-07 CYTH3-FAM220A 1 3 chr7:6272474:- chr7:6331235:- FRAMESHIFT NA TCGA-BK-A139-01A-11R-A277-07 EARS2-COG7 1 2 chr16:23552149:- chr16:23418827:- INFRAME NA TCGA-BK-A26L-01A-11R-A277-07 GGNBP2-NR1D1 7 11 chr17:36585450:+ chr17:40100266:- . NA TCGA-BK-A26L-01A-11R-A277-07 FOXJ3-TUFT1 2 11 chr1:42278348:- chr1:151562585:+ INFRAME NA TCGA-BK-A26L-01A-11R-A277-07 NLGN4X-DMD 1 15 chrX:6029280:- chrX:31774192:- INFRAME NA TCGA-BK-A26L-01A-11R-A277-07 SRPK1-PXT1 2 5 chr6:35838337:- chr6:36391874:- FRAMESHIFT NA TCGA-BK-A26L-01A-11R-A277-07 ARID3B-USP47 1 5 chr15:74541330:+ chr11:11884467:+ . NA TCGA-BK-A56F-01A-32R-A27V-07 FNDC3B-PIK3CA 14 14 chr3:172133546:+ chr3:179198750:+ . NA TCGA-BK-A6W3-01A-12R-A34R-07 LRRC14-UPK1B 84 0 chr8:144524750:+ chr3:119186718:+ . NA TCGA-D1-A3DG-01A-11R-A19W-07 CLIP2-NCF1B 19 42 chr7:74364315:+ chr7:73225711:+ . NA TCGA-D1-A3DG-01A-11R-A19W-07 TMEM120B-ORAI1 9 16 chr12:121761738:+ chr12:121641041:+ FRAMESHIFT NA TCGA-D1-A3DG-01A-11R-A19W-07 STIM1-CLIP1 5 12 chr11:3856409:+ chr12:122288541:- FRAMESHIFT NA TCGA-D1-A3DG-01A-11R-A19W-07 TBC1D2B-ACSBG1 3 13 chr15:78003305:- chr15:78179780:- FRAMESHIFT NA TCGA-D1-A3DG-01A-11R-A19W-07 SMU1-FAM219A 2 16 chr9:33053123:- chr9:34405964:- INFRAME NA TCGA-D1-A3DG-01A-11R-A19W-07 TMEM234-RUSC1 3 10 chr1:32216194:- chr1:155325316:+ . NA TCGA-D1-A3DG-01A-11R-A19W-07 NUP98-MLXIP 2 4 chr11:3768581:- chr12:122127256:+ INFRAME NA TCGA-D1-A3DH-01A-11R-A19W-07 METTL16-RTN4RL1 7 35 chr17:2438109:- chr17:1937808:- FRAMESHIFT NA TCGA-D1-A3DH-01A-11R-A19W-07 PTPRK-MTRF1L 3 22 chr6:128397566:- chr6:152991321:- INFRAME NA TCGA-D1-A3DH-01A-11R-A19W-07 TULP4-RPS12 3 18 chr6:158314268:+ chr6:132814732:+ . NA TCGA-D1-A3DH-01A-11R-A19W-07 ITPR1-BHLHE40 5 8 chr3:4766710:+ chr3:4982836:+ INFRAME NA TCGA-D1-A3DH-01A-11R-A19W-07 PITPNA-KCNIP4 1 19 chr17:1548296:- chr4:20850667:- INFRAME NA TCGA-D1-A3DH-01A-11R-A19W-07 CACNG5-PRKCA 2 4 chr17:66835250:+ chr17:66773987:+ . NA TCGA-D1-A3DH-01A-11R-A19W-07 RBMS2-TNFAIP3 1 8 chr12:56582152:+ chr6:137874845:+ FRAMESHIFT NA TCGA-D1-A3DH-01A-11R-A19W-07 AIG1-COL8A1 2 2 chr6:143165183:+ chr3:99790680:+ . NA TCGA-D1-A3DH-01A-11R-A19W-07 PSMD8-SPINT2 1 6 chr19:38374961:+ chr19:38283627:+ FRAMESHIFT NA TCGA-D1-A3DH-01A-11R-A19W-07 ZBTB20-IFT57 1 6 chr3:114900304:- chr3:108167864:- . NA TCGA-D1-A3DH-01A-11R-A19W-07 CALCB-INSC 1000 1000 chr11:15077470:+ chr11:15149130:+ . NA TCGA-D1-A3JQ-01A-11R-A22K-07 ZBTB17-DLC1 27 66 chr1:15973039:- chr8:13115657:- . NA TCGA-D1-A3JQ-01A-11R-A22K-07 RPL29-ACY1 8 26 chr3:51993730:- chr3:51986204:+ . NA TCGA-D1-A3JQ-01A-11R-A22K-07 CDC25A-SLC26A6 4 23 chr3:48187778:- chr3:48629711:- INFRAME NA TCGA-D1-A3JQ-01A-11R-A22K-07 PADI3-EIF4G3 7 9 chr1:17280796:+ chr1:20930248:- . NA TCGA-D1-A3JQ-01A-11R-A22K-07 WNK1-GIPC1 2 20 chr12:754324:+ chr19:14492912:- . NA TCGA-D1-A3JQ-01A-11R-A22K-07 TMTC1-PGD 3 8 chr12:29751666:- chr1:10399629:+ INFRAME NA TCGA-D1-A3JQ-01A-11R-A22K-07 KAZN-MTOR 3 6 chr1:14924572:+ chr1:11146791:- INFRAME NA TCGA-D1-A3JQ-01A-11R-A22K-07 ILF3-ZNF441 2 6 chr19:10671535:+ chr19:11778330:+ FRAMESHIFT NA TCGA-D1-A3JQ-01A-11R-A22K-07 P3H4-ACLY 1 7 chr17:41806796:- chr17:41873965:- INFRAME NA TCGA-D1-A3JQ-01A-11R-A22K-07 PNPLA7-TPRN 2 3 chr9:137505614:- chr9:137192691:- INFRAME NA TCGA-D1-A3JQ-01A-11R-A22K-07 CAMK2B-SLC25A17 1 6 chr7:44231006:- chr22:40779125:- INFRAME NA TCGA-DF-A2KR-01A-11R-A180-07 KIF13B-EYA2 50 129 chr8:29092745:- chr20:47143059:+ INFRAME NA TCGA-DF-A2KR-01A-11R-A180-07 PHC2-NLRP4 27 33 chr1:33349597:- chr19:55870827:+ . NA TCGA-DF-A2KR-01A-11R-A180-07 CDC42EP4-COMMD1 15 49 chr17:73311893:- chr2:62000701:+ . NA TCGA-DF-A2KR-01A-11R-A180-07 ZNF148-AGXT 6 23 chr3:125288103:- chr2:240871349:+ INFRAME NA TCGA-DF-A2KR-01A-11R-A180-07 CTIF-C5orf56 6 19 chr18:48761689:+ chr5:132449650:+ INFRAME NA TCGA-DF-A2KR-01A-11R-A180-07 FMNL2-WDYHV1 4 9 chr2:152647935:+ chr8:123435442:+ . NA TCGA-DF-A2KR-01A-11R-A180-07 C5orf56-CTIF 2 5 chr5:132419940:+ chr18:48817221:+ INFRAME NA TCGA-DF-A2KR-01A-11R-A180-07 ATAD2-KHDRBS3 2 4 chr8:123333878:- chr8:135521237:+ INFRAME NA TCGA-DF-A2KR-01A-11R-A180-07 C2CD5-ST8SIA1 1 2 chr12:22453896:- chr12:22326341:- . NA TCGA-DI-A2QT-01A-12R-A19W-07 PLEKHF1-SLC35A4 3 2 chr19:29675154:+ chr5:140568742:+ . NA TCGA-DI-A2QT-01A-12R-A19W-07 ERBB4-SDCCAG8 1 1 chr2:211561903:- chr1:243270092:+ . Likely Oncogenic NA TCGA-DI-A2QY-01A-12R-A19W-07 MYO5B-COX6C 9 60 chr18:49974350:- chr8:99892052:- . NA TCGA-DI-A2QY-01A-12R-A19W-07 SPTLC3-HOXA-AS3 2 10 chr20:13009384:+ chr7:27151575:+ . NA TCGA-DI-A2QY-01A-12R-A19W-07 FRAS1-MGMT 1 10 chr4:78422000:+ chr10:129536241:+ FRAMESHIFT NA TCGA-DI-A2QY-01A-12R-A19W-07 HTT-GRK4 3 2 chr4:3075088:+ chr4:3040572:+ FRAMESHIFT NA TCGA-DI-A2QY-01A-12R-A19W-07 APAF1-LRRIQ1 1 4 chr12:98699569:+ chr12:85244789:+ INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 ERGIC3-MAP1LC3A 317 917 chr20:35548865:+ chr20:34559208:+ INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 LDLR-MRPL4 369 663 chr19:11107514:+ chr19:10258222:+ INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 SEPT9-MGAT5B 29 92 chr17:77373552:+ chr17:76937988:+ INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 ADAR-UBE2J2 11 124 chr1:154627855:- chr1:1267992:- . NA TCGA-E6-A8L9-01A-21R-A37O-07 TRIOBP-CDC42EP1 8 48 chr22:37701479:+ chr22:37566072:+ . NA TCGA-E6-A8L9-01A-21R-A37O-07 SPECC1-STAMBP 13 27 chr17:20260294:+ chr2:73873352:+ . NA TCGA-E6-A8L9-01A-21R-A37O-07 SRP68-QRICH2 7 26 chr17:76050428:- chr17:76291412:- FRAMESHIFT NA TCGA-E6-A8L9-01A-21R-A37O-07 RGS3-BSPRY 4 27 chr9:113584427:+ chr9:113354240:+ INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 FAM222B-MYO18A 5 20 chr17:28842682:- chr17:29167021:- . NA TCGA-E6-A8L9-01A-21R-A37O-07 LRRC8A-MEN1 5 10 chr9:128882250:+ chr11:64810905:- . Likely Oncogenic NA TCGA-E6-A8L9-01A-21R-A37O-07 TNRC6B-PES1 2 18 chr22:40156182:+ chr22:30605517:- . NA TCGA-E6-A8L9-01A-21R-A37O-07 SMIM4-NISCH 2 17 chr3:52536773:+ chr3:52470859:+ INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 NDC1-SSBP3 5 3 chr1:53787158:- chr1:54281527:- INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 PPP1R37-ALOX15B 1 17 chr19:45093527:+ chr17:8046907:+ FRAMESHIFT NA TCGA-E6-A8L9-01A-21R-A37O-07 TET3-SPECC1 2 8 chr2:74003166:+ chr17:20096631:+ . NA TCGA-E6-A8L9-01A-21R-A37O-07 CIT-SPPL3 1 11 chr12:119752050:- chr12:120766372:- FRAMESHIFT NA TCGA-E6-A8L9-01A-21R-A37O-07 RGS12-PDZRN3 1 6 chr4:3318051:+ chr3:73608684:- INFRAME NA TCGA-E6-A8L9-01A-21R-A37O-07 ST7L-AP2A2 1 5 chr1:112618909:- chr11:1009100:+ FRAMESHIFT NA TCGA-E6-A8L9-01A-21R-A37O-07 CNN2-ARID3A 1000 1000 chr19:1036562:+ chr19:929262:+ . NA TCGA-EO-A1Y7-01A-11R-A157-07 MAPKAPK2-PLA2G2A 73 135 chr1:206685508:+ chr1:19978879:- . NA TCGA-EO-A1Y7-01A-11R-A157-07 PEX11A-MESP1 50 147 chr15:89690577:- chr15:89750227:- FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 PTPN4-CFAP221 14 49 chr2:119809991:+ chr2:119651974:+ FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 SKP2-EXOSC10 4 43 chr5:36153042:+ chr1:11072171:- FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 CSNK1A1-PDE6A 6 18 chr5:149550075:- chr5:149899524:- FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 FPGS-GARNL3 4 6 chr9:127813323:+ chr9:127383438:+ INFRAME NA TCGA-EO-A1Y7-01A-11R-A157-07 PPP1R16A-SLC52A2 2 11 chr8:144478127:+ chr8:144359184:+ . NA TCGA-EO-A1Y7-01A-11R-A157-07 TPX2-DEFB123 3 7 chr20:31771682:+ chr20:31450029:+ FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 CTAGE5-PNN 1 7 chr14:39348977:+ chr14:39179091:+ FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 TRAIP-MST1 2 2 chr3:49847525:- chr3:49685962:- FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 LPIN1-SARS 1 4 chr2:11795487:+ chr1:109223978:+ FRAMESHIFT NA TCGA-EO-A1Y7-01A-11R-A157-07 SRGAP3-LHFPL4 1 3 chr3:9248885:- chr3:9506203:- INFRAME NA TCGA-EO-A22U-01A-11R-A180-07 MICALL1-EIF3L 1 10 chr22:37927826:+ chr22:37886765:+ INFRAME NA TCGA-EO-A3AS-01A-11R-A19W-07 TMEM104-SLC9A3R1 10 16 chr17:74777375:+ chr17:74762012:+ INFRAME NA TCGA-EO-A3AS-01A-11R-A19W-07 RGL2-DAXX 4 30 chr6:33298455:- chr6:33324030:- . NA TCGA-EO-A3AS-01A-11R-A19W-07 PMVK-PYGO2 3 30 chr1:154932352:- chr1:154959846:- INFRAME NA TCGA-EO-A3AS-01A-11R-A19W-07 ELMO1-HDAC9 3 19 chr7:37448675:- chr7:18496262:+ . NA TCGA-EO-A3AS-01A-11R-A19W-07 USP9X-CD244 2 9 chrX:41086109:+ chr1:160839049:- . NA TCGA-EO-A3AS-01A-11R-A19W-07 ITGB5-HDAC9 1 10 chr3:124769013:- chr7:18496262:+ INFRAME NA TCGA-EO-A3AS-01A-11R-A19W-07 LOXL3-M1AP 2 3 chr2:74550185:- chr2:74558874:- INFRAME NA TCGA-EO-A3AS-01A-11R-A19W-07 USP34-CCDC117 1 4 chr2:61470650:- chr22:28773725:+ FRAMESHIFT NA TCGA-EO-A3AV-01A-12R-A19W-07 FARP2-INHA 4 21 chr2:241373290:+ chr2:219574694:+ FRAMESHIFT NA TCGA-EO-A3AV-01A-12R-A19W-07 C1orf186-NDUFS6 1 1 chr1:206053265:+ chr5:1814339:+ . NA TCGA-EO-A3AZ-01A-12R-A19W-07 PTGR2-NDUFB2 1 1 chr14:73874214:+ chr7:140702866:+ FRAMESHIFT NA TCGA-EO-A3B1-01A-12R-A19W-07 PPFIBP1-WNT7A 5 85 chr12:27524365:+ chr3:13819423:- . NA TCGA-EO-A3B1-01A-12R-A19W-07 KIF13B-TMEM217 1 16 chr8:29245346:- chr6:37219041:- . NA TCGA-EO-A3KU-01A-11R-A22K-07 PARVA-SPON1 13 19 chr11:12477949:+ chr11:14135420:+ INFRAME NA TCGA-EO-A3KU-01A-11R-A22K-07 TEAD1-CTR9 7 27 chr11:12902113:+ chr11:10763431:+ INFRAME NA TCGA-EO-A3KU-01A-11R-A22K-07 NDUFV2-TRIM5 8 18 chr18:9126907:+ chr11:5667711:- FRAMESHIFT NA TCGA-EO-A3KU-01A-11R-A22K-07 SAMD4B-GMFG 1 46 chr19:39354066:+ chr19:39333126:- . NA TCGA-EO-A3KU-01A-11R-A22K-07 NCOA2-FAM49B 1 5 chr8:70138203:- chr8:129862334:- FRAMESHIFT NA TCGA-EO-A3KU-01A-11R-A22K-07 USP54-UBE2W 1 4 chr10:73541375:- chr8:73830472:- INFRAME NA TCGA-EO-A3KU-01A-11R-A22K-07 CAPRIN1-THOC1 1000 1000 chr11:34053039:+ chr18:224994:- . NA TCGA-EO-A3KW-01A-11R-A22K-07 CASP8-VMP1 30 102 chr2:201285317:+ chr17:59838295:+ INFRAME Likely Oncogenic NA TCGA-EO-A3KW-01A-11R-A22K-07 BIRC6-MATN3 11 41 chr2:32416163:+ chr2:20006310:- INFRAME NA TCGA-EO-A3KW-01A-11R-A22K-07 FAM168A-COA4 4 14 chr11:73597923:- chr11:73873394:- . NA TCGA-EO-A3KW-01A-11R-A22K-07 NPTN-ECI1 5 10 chr15:73633125:- chr16:2251429:- INFRAME NA TCGA-EO-A3KW-01A-11R-A22K-07 P4HA1-CFAP70 1 23 chr10:73096766:- chr10:73299665:- . NA TCGA-EO-A3KW-01A-11R-A22K-07 CYB561D2-RBM6 5 5 chr3:50351560:+ chr3:50048245:+ INFRAME NA TCGA-EO-A3KW-01A-11R-A22K-07 CDYL-KCNMA1-AS2 2 13 chr6:4892379:+ chr10:77147652:+ . NA TCGA-EO-A3KW-01A-11R-A22K-07 KHDRBS1-SERINC2 1 7 chr1:32031640:+ chr1:31423693:+ INFRAME NA TCGA-EO-A3KX-01A-11R-A22K-07 GPRC5C-KIF19 1 7 chr17:74432523:+ chr17:74343024:+ INFRAME NA TCGA-EY-A210-01A-11R-A157-07 HACD3-URM1 90 230 chr15:65558731:+ chr9:128387816:+ INFRAME NA TCGA-EY-A210-01A-11R-A157-07 MTOR-GARNL3 3 22 chr1:11157152:- chr9:127388904:+ FRAMESHIFT NA TCGA-EY-A210-01A-11R-A157-07 MYO9A-GRB2 5 13 chr15:72117680:- chr17:75332797:- . NA TCGA-EY-A210-01A-11R-A157-07 SPECC1L-HACD3 4 12 chr22:24270983:+ chr15:65551676:+ . NA TCGA-EY-A2ON-01A-21R-A18M-07 ARID3A-MORC2 81 428 chr19:929896:+ chr22:30932769:- INFRAME NA TCGA-EY-A2ON-01A-21R-A18M-07 STX5-ASIP 3 14 chr11:62824166:- chr20:34260365:+ . NA TCGA-EY-A2ON-01A-21R-A18M-07 AFF1-GAST 2 15 chr4:86948571:+ chr17:41715432:+ . NA TCGA-EY-A2ON-01A-21R-A18M-07 RASAL1-DDX54 1 16 chr12:113115934:- chr12:113159109:- FRAMESHIFT NA TCGA-EY-A2ON-01A-21R-A18M-07 MAPRE1-POFUT1 2 7 chr20:32820028:+ chr20:32215269:+ . NA TCGA-EY-A2ON-01A-21R-A18M-07 TK1-AFMID 1 11 chr17:78175050:- chr17:78190970:+ INFRAME NA TCGA-EY-A2OQ-01A-11R-A19W-07 TAOK1-CPD 22 53 chr17:29391024:+ chr17:30420841:+ . NA TCGA-EY-A2OQ-01A-11R-A19W-07 RAI1-MED9 1 47 chr17:17724159:+ chr17:17491279:+ . NA TCGA-EY-A2OQ-01A-11R-A19W-07 ATAD3B-HADHB 4 14 chr1:1472089:+ chr2:26263380:+ INFRAME NA TCGA-EY-A2OQ-01A-11R-A19W-07 ZNF627-PRKCSH 1 19 chr19:11597630:+ chr19:11435645:+ . NA TCGA-EY-A2OQ-01A-11R-A19W-07 MYO9B-NEK8 4 3 chr19:17075874:+ chr17:28740822:+ . NA TCGA-EY-A2OQ-01A-11R-A19W-07 NFE2L1-PNPO 1 15 chr17:48057502:+ chr17:47943306:+ INFRAME NA TCGA-EY-A2OQ-01A-11R-A19W-07 ANKS1A-PIGN 3 4 chr6:34889599:+ chr18:62045979:- INFRAME NA TCGA-EY-A2OQ-01A-11R-A19W-07 GOSR1-TAOK1 1 12 chr17:30510909:+ chr17:29467145:+ FRAMESHIFT NA TCGA-EY-A2OQ-01A-11R-A19W-07 UBE4B-SLC25A33 1 8 chr1:10149282:+ chr1:9553626:+ INFRAME NA TCGA-EY-A3L3-01A-11R-A22K-07 BMPR1A-C10orf11 45 347 chr10:86900126:+ chr10:76324401:+ FRAMESHIFT NA TCGA-EY-A3L3-01A-11R-A22K-07 PPP4R1-DPP4 9 45 chr18:9561980:- chr2:161995372:- INFRAME NA TCGA-EY-A3L3-01A-11R-A22K-07 UNK-C1QTNF1 6 38 chr17:75784984:+ chr17:79043955:+ . NA TCGA-EY-A3L3-01A-11R-A22K-07 RPLP2-DEAF1 5 17 chr11:812633:+ chr11:644654:- FRAMESHIFT NA TCGA-EY-A3L3-01A-11R-A22K-07 SAP30BP-UNK 2 6 chr17:75671863:+ chr17:75809760:+ FRAMESHIFT NA TCGA-EY-A3L3-01A-11R-A22K-07 ASAP1-LMNTD1 2 4 chr8:130358017:- chr12:25526955:- FRAMESHIFT NA TCGA-EY-A3L3-01A-11R-A22K-07 ATF7-CALCOCO1 1 7 chr12:53625951:- chr12:53719829:- . NA TCGA-EY-A3QX-01A-11R-A22K-07 NEDD9-GOLGB1 108 212 chr6:11213281:- chr3:121669355:- INFRAME NA TCGA-EY-A3QX-01A-11R-A22K-07 ERBB2-PVT1 18 131 chr17:39717480:+ chr8:128096518:+ . NA TCGA-EY-A3QX-01A-11R-A22K-07 MAPK1-PRODH 26 51 chr22:21867322:- chr22:18931198:- FRAMESHIFT NA TCGA-EY-A3QX-01A-11R-A22K-07 FOXK2-LONP2 14 56 chr17:82586200:+ chr16:48361477:+ . NA TCGA-EY-A3QX-01A-11R-A22K-07 SF1-ZSWIM5 13 33 chr11:64776498:- chr1:45088237:- INFRAME NA TCGA-EY-A3QX-01A-11R-A22K-07 TRAPPC9-SLC45A4 10 37 chr8:140426615:- chr8:141207325:- . NA TCGA-EY-A3QX-01A-11R-A22K-07 LAMC2-NMNAT2 8 25 chr1:183186431:+ chr1:183293793:- INFRAME NA TCGA-EY-A3QX-01A-11R-A22K-07 SDF4-PPP1R2 5 35 chr1:1218458:- chr3:195529901:- FRAMESHIFT NA TCGA-EY-A3QX-01A-11R-A22K-07 ATP2B4-PRELP 5 17 chr1:203627219:+ chr1:203483169:+ . NA TCGA-EY-A3QX-01A-11R-A22K-07 SYTL3-SNX9 6 5 chr6:158713878:+ chr6:157921531:+ INFRAME NA TCGA-EY-A3QX-01A-11R-A22K-07 ARAP1-ARRB1 2 13 chr11:72702905:- chr11:75290039:- INFRAME NA TCGA-EY-A3QX-01A-11R-A22K-07 TNS1-RNF25 4 5 chr2:217906335:- chr2:218668679:- FRAMESHIFT NA TCGA-EY-A3QX-01A-11R-A22K-07 ACAP2-UBE2J2 3 8 chr3:195381009:- chr1:1267992:- INFRAME NA TCGA-EY-A3QX-01A-11R-A22K-07 PPP1R1B-GRB7 2 2 chr17:39635726:+ chr17:39742252:+ INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 SPOP-NDUFS5 70 153 chr17:49677933:- chr1:39028723:+ . Likely Oncogenic NA TCGA-EY-A4KR-01A-11R-A27V-07 ARID1B-EZR 29 92 chr6:156935576:+ chr6:158789371:- INFRAME Likely Oncogenic NA TCGA-EY-A4KR-01A-11R-A27V-07 DOCK1-DACT3 16 115 chr10:127061776:+ chr19:46653075:- INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 SCRN2-CBX1 10 123 chr17:47840670:- chr17:48075100:- INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 RNF213-AKAP8L 19 85 chr17:80358479:+ chr19:15410594:- FRAMESHIFT NA TCGA-EY-A4KR-01A-11R-A27V-07 GLYR1-C16orf89 10 97 chr16:4811170:- chr16:5047964:- FRAMESHIFT NA TCGA-EY-A4KR-01A-11R-A27V-07 RFX3-PLGRKT 16 62 chr9:3395472:- chr9:5361888:- INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 OLFM2-EXOSC10 9 26 chr19:9936304:- chr1:11077651:- INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 VMP1-BCAS3 8 16 chr17:59765138:+ chr17:60924407:+ INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 TRAPPC11-KCNN4 7 16 chr4:183668117:+ chr19:43772135:- INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 SMURF2P1-GOSR1 5 20 chr17:30610942:+ chr17:30510880:+ . NA TCGA-EY-A4KR-01A-11R-A27V-07 ANKRD27-PEPD 6 11 chr19:32628083:- chr19:33411749:- FRAMESHIFT NA TCGA-EY-A4KR-01A-11R-A27V-07 NECTIN2-CEACAM19 1 30 chr19:44846613:+ chr19:44672596:+ INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 HIBCH-STAT1 1 21 chr2:190294546:- chr2:190964694:- . NA TCGA-EY-A4KR-01A-11R-A27V-07 ITGB8-ATM 6 1 chr7:20363722:+ chr11:108267171:+ INFRAME Likely Oncogenic NA TCGA-EY-A4KR-01A-11R-A27V-07 PABPC1-ZNF706 2 9 chr8:100704297:- chr8:101178387:- . NA TCGA-EY-A4KR-01A-11R-A27V-07 IQGAP1-ZNF710 1 12 chr15:90390873:+ chr15:90067110:+ . NA TCGA-EY-A4KR-01A-11R-A27V-07 VIPAS39-ISM2 3 4 chr14:77444249:- chr14:77484919:- INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 SNX27-TUFT1 1 7 chr1:151639119:+ chr1:151562585:+ INFRAME NA TCGA-EY-A4KR-01A-11R-A27V-07 SLC38A10-RPTOR 1 6 chr17:81270918:- chr17:80822201:+ FRAMESHIFT NA TCGA-EY-A4KR-01A-11R-A27V-07 SUSD6-PLEKHD1 1 4 chr14:69658713:+ chr14:69500115:+ FRAMESHIFT NA TCGA-EY-A4KR-01A-11R-A27V-07 MACC1-NPAT 1 2 chr7:20198525:- chr11:108197420:- . NA TCGA-EY-A4KR-01A-11R-A27V-07 MACF1-HDAC5 1 2 chr1:39258028:+ chr17:44117704:- . NA TCGA-EY-A547-01A-11R-A27V-07 RBL1-BCAS1 6 21 chr20:37022650:- chr20:53944996:- INFRAME NA TCGA-EY-A54A-01A-11R-A27V-07 ERBB2-NOL12 59 74 chr17:39728270:+ chr22:37681867:+ . NA TCGA-EY-A54A-01A-11R-A27V-07 MRPL50-TMEM246 8 31 chr9:101398501:- chr9:101489200:- . NA TCGA-EY-A54A-01A-11R-A27V-07 B4GALT5-SPATA2 6 34 chr20:49656568:- chr20:49908592:- . NA TCGA-EY-A54A-01A-11R-A27V-07 NOL12-STARD3 2 33 chr22:37688015:+ chr17:39653481:+ . NA TCGA-EY-A54A-01A-11R-A27V-07 DDX46-SEC24A 3 15 chr5:134790552:+ chr5:134674615:+ FRAMESHIFT NA TCGA-EY-A54A-01A-11R-A27V-07 GANAB-SLC22A8 2 18 chr11:62628769:- chr11:63000823:- FRAMESHIFT NA TCGA-EY-A54A-01A-11R-A27V-07 HENMT1-MYBPHL 2 10 chr1:108654716:- chr1:109298257:- FRAMESHIFT NA TCGA-EY-A54A-01A-11R-A27V-07 NSUN5-BAZ1B 1 10 chr7:73307394:- chr7:73450994:- FRAMESHIFT NA TCGA-EY-A54A-01A-11R-A27V-07 PTPRM-ZNF595 1 3 chr18:8069994:+ chr4:59430:+ FRAMESHIFT NA TCGA-EY-A54A-01A-11R-A27V-07 SETD1A-SRCAP 1 3 chr16:30980657:+ chr16:30733280:+ FRAMESHIFT NA TCGA-EY-A54A-01A-11R-A27V-07 ADCK1-SLIRP 1 2 chr14:77822518:+ chr14:77715772:+ INFRAME NA TCGA-EY-A54A-01A-11R-A27V-07 SPG7-EFCAB12 1000 1000 chr16:89532636:+ chr3:129421803:- INFRAME NA TCGA-FI-A3PV-01A-11R-A22K-07 MFHAS1-NBDY 100 325 chr8:8890061:- chrX:56817320:+ . NA TCGA-FI-A3PV-01A-11R-A22K-07 HSPG2-MATN2 24 102 chr1:21839371:- chr8:97978886:+ INFRAME NA TCGA-FI-A3PV-01A-11R-A22K-07 RNF213-NVL 7 87 chr17:80363314:+ chr1:224294411:- FRAMESHIFT NA TCGA-FI-A3PV-01A-11R-A22K-07 KIRREL-SNUPN 10 28 chr1:158076262:+ chr15:75626371:- . NA TCGA-FI-A3PV-01A-11R-A22K-07 WDR20-PPP2R5C 5 45 chr14:102195120:+ chr14:101856686:+ FRAMESHIFT NA TCGA-FI-A3PV-01A-11R-A22K-07 MAN1A2-PTGFRN 3 16 chr1:117442325:+ chr1:116986801:+ FRAMESHIFT NA TCGA-FI-A3PV-01A-11R-A22K-07 BCOR-PHEX 2 15 chrX:40177007:- chrX:22212904:+ . Likely Oncogenic NA TCGA-FI-A3PV-01A-11R-A22K-07 MIB2-ACVR1B 4 7 chr1:1623945:+ chr12:51975265:+ INFRAME NA TCGA-FI-A3PV-01A-11R-A22K-07 FRMD8-VPS51 1 6 chr11:65393674:+ chr11:65107187:+ INFRAME NA TCGA-FI-A3PV-01A-11R-A22K-07 SIPA1L3-COLEC10 1 4 chr19:37907358:+ chr8:119105800:+ . NA TCGA-FI-A3PX-01A-11R-A22K-07 RIT1-TARS2 22 72 chr1:155904311:- chr1:150504335:+ INFRAME NA TCGA-FI-A3PX-01A-11R-A22K-07 PUM1-NKAIN1 12 56 chr1:30950133:- chr1:31188187:- INFRAME NA TCGA-FI-A3PX-01A-11R-A22K-07 USP25-DZIP3 9 45 chr21:15791664:+ chr3:108674078:+ INFRAME NA TCGA-FI-A3PX-01A-11R-A22K-07 EPCAM-ABCG8 3 11 chr2:47369581:+ chr2:43844507:+ FRAMESHIFT NA TCGA-FI-A3PX-01A-11R-A22K-07 FAM104A-CDC42EP4 3 10 chr17:73232086:- chr17:73286612:- . NA TCGA-FI-A3PX-01A-11R-A22K-07 MAFF-STK16 1 16 chr22:38202212:+ chr2:219245896:+ . NA TCGA-FI-A3PX-01A-11R-A22K-07 DIP2C-TMEM94 4 1 chr10:310031:- chr17:75471800:+ . NA TCGA-FI-A3PX-01A-11R-A22K-07 TNRC18-GRIN2B 2 5 chr7:5374055:- chr12:13438011:- FRAMESHIFT NA TCGA-H5-A2HR-01A-11R-A180-07 SMARCC1-ZBTB8OS 10 86 chr3:47610066:- chr1:32627544:- FRAMESHIFT NA TCGA-H5-A2HR-01A-11R-A180-07 NOL9-ESPN 2 17 chr1:6541830:- chr1:6457184:+ FRAMESHIFT NA TCGA-H5-A2HR-01A-11R-A180-07 SNX14-SNHG5 2 15 chr6:85593579:- chr6:85666147:- . NA TCGA-H5-A2HR-01A-11R-A180-07 TFB2M-SMYD3 1 9 chr1:246556573:- chr1:245863886:- INFRAME NA TCGA-H5-A2HR-01A-11R-A180-07 ATP2B2-TAMM41 1 6 chr3:10534039:- chr3:11809682:- . NA TCGA-H5-A2HR-01A-11R-A180-07 ANKLE2-RNF180 2 0 chr12:132735406:- chr5:64217361:+ FRAMESHIFT NA TCGA-JU-AAVI-01A-11R-A40A-07 ERI3-EIF2B3 13 29 chr1:44352850:- chr1:44926739:- INFRAME NA TCGA-KP-A3VZ-01A-11R-A22K-07 HNRNPL-SELENOW 78 264 chr19:38841613:- chr19:47780725:+ . NA TCGA-KP-A3VZ-01A-11R-A22K-07 HNRNPL-TPRX1 42 236 chr19:38841101:- chr19:47802771:- . NA TCGA-KP-A3VZ-01A-11R-A22K-07 PAX8-IL36B 17 93 chr2:113278370:- chr2:113031155:- INFRAME NA TCGA-KP-A3VZ-01A-11R-A22K-07 EVPL-SAP30BP 26 53 chr17:76021468:- chr17:75691394:+ . NA TCGA-KP-A3VZ-01A-11R-A22K-07 RYR1-ZNF383 16 90 chr19:38578204:+ chr19:37242469:+ FRAMESHIFT NA TCGA-KP-A3VZ-01A-11R-A22K-07 FIGN-STK25 8 103 chr2:163734903:- chr2:241501708:- FRAMESHIFT NA TCGA-KP-A3VZ-01A-11R-A22K-07 PLEKHG4B-MELK 7 90 chr5:151599:+ chr9:36674834:+ INFRAME NA TCGA-KP-A3VZ-01A-11R-A22K-07 CREBBP-IFT140 8 23 chr16:3810603:- chr16:1592588:- INFRAME Likely Oncogenic NA TCGA-KP-A3VZ-01A-11R-A22K-07 C6orf62-KIAA0319 3 26 chr6:24716101:- chr6:24596067:- . NA TCGA-KP-A3VZ-01A-11R-A22K-07 ZNF174-CLUAP1 8 3 chr16:3401270:+ chr16:3512383:+ . NA TCGA-KP-A3VZ-01A-11R-A22K-07 NCAM1-POU2AF1 2 21 chr11:112961664:+ chr11:111358918:- INFRAME NA TCGA-KP-A3VZ-01A-11R-A22K-07 RNF180-CWC27 2 16 chr5:64330406:+ chr5:64971703:+ INFRAME NA TCGA-KP-A3VZ-01A-11R-A22K-07 ACVR2A-EPC2 4 6 chr2:147918592:+ chr2:148690214:+ FRAMESHIFT NA TCGA-KP-A3VZ-01A-11R-A22K-07 UNK-RNF157 1 12 chr17:75784984:+ chr17:76173790:- FRAMESHIFT NA TCGA-KP-A3VZ-01A-11R-A22K-07 SLIT2-PACRGL 2 7 chr4:20268881:+ chr4:20727285:+ FRAMESHIFT NA TCGA-KP-A3VZ-01A-11R-A22K-07 STK24-PDE1A 2 6 chr13:98576745:- chr2:182522386:- . NA TCGA-KP-A3VZ-01A-11R-A22K-07 POU2AF1-BCO2 1 3 chr11:111357445:- chr11:112213724:+ INFRAME NA TCGA-KP-A3VZ-01A-11R-A22K-07 CAPZB-TMCO4 1 2 chr1:19485436:- chr1:19694551:- FRAMESHIFT NA TCGA-KP-A3W1-01A-11R-A22K-07 HN1-RECQL5 17 96 chr17:75154342:- chr17:75631668:- INFRAME NA TCGA-KP-A3W1-01A-11R-A22K-07 WDR27-HDDC2 3 8 chr6:169582836:- chr6:125220152:- . NA TCGA-KP-A3W1-01A-11R-A22K-07 BAZ1B-BCL7B 2 1 chr7:73465439:- chr7:73543644:- FRAMESHIFT NA TCGA-KP-A3W1-01A-11R-A22K-07 CMIP-DOK4 1 2 chr16:81445541:+ chr16:57479685:- . NA TCGA-KP-A3W1-01A-11R-A22K-07 APOL2-SCUBE1 1000 1000 chr22:36231340:- chr22:43270589:- . NA TCGA-KP-A3W3-01A-11R-A22K-07 SPCS3-VEGFC 2 2 chr4:176320219:+ chr4:176729746:- FRAMESHIFT NA TCGA-KP-A3W4-01A-11R-A22K-07 ERGIC1-MIEN1 23 30 chr5:172912956:+ chr17:39730232:- . NA TCGA-KP-A3W4-01A-11R-A22K-07 UPF3A-CDC16 6 50 chr13:114282943:+ chr13:114242121:+ FRAMESHIFT NA TCGA-KP-A3W4-01A-11R-A22K-07 MOB3C-EFCAB14 5 23 chr1:46616711:- chr1:46716443:- . NA TCGA-KP-A3W4-01A-11R-A22K-07 MKNK1-EFCAB14 5 20 chr1:46616711:- chr1:46716443:- . NA TCGA-KP-A3W4-01A-11R-A22K-07 CACUL1-IL1RN 2 9 chr10:118754396:- chr2:113127689:+ INFRAME NA TCGA-KP-A3W4-01A-11R-A22K-07 EIF2S2-SKAP1 2 4 chr20:34103462:- chr17:48189500:- FRAMESHIFT NA TCGA-KP-A3W4-01A-11R-A22K-07 ZNF207-RHOT1 1 6 chr17:32369782:+ chr17:32253085:+ . NA TCGA-KP-A3W4-01A-11R-A22K-07 CAMK2D-STAC3 1 3 chr4:113465529:- chr12:57244965:- FRAMESHIFT NA TCGA-PG-A5BC-01A-12R-A27V-07 COG4-MELTF 3 28 chr16:70500958:- chr3:197026759:- FRAMESHIFT NA TCGA-PG-A5BC-01A-12R-A27V-07 POC1A-TWF2 3 20 chr3:52138169:- chr3:52232117:- INFRAME NA TCGA-PG-A5BC-01A-12R-A27V-07 RERE-SLC2A7 3 19 chr1:8655973:- chr1:9019333:- FRAMESHIFT NA TCGA-PG-A5BC-01A-12R-A27V-07 DDX46-CDC25C 2 19 chr5:134758955:+ chr5:138331214:- INFRAME NA TCGA-PG-A5BC-01A-12R-A27V-07 GON4L-RIT1 3 8 chr1:155857147:- chr1:155904804:- . NA TCGA-PG-A5BC-01A-12R-A27V-07 PAK4-ACP7 2 11 chr19:39125919:+ chr19:39085092:+ . NA TCGA-PG-A5BC-01A-12R-A27V-07 SRC-MANBAL 1 1 chr20:37365277:+ chr20:37316308:+ . NA TCGA-PG-A7D5-01A-11R-A34R-07 TGOLN2-IMMT 16 35 chr2:85324915:- chr2:86144881:- FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 MPDZ-ITPK1 6 28 chr9:13247635:- chr14:92941904:- FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 TPX2-MECOM 7 22 chr20:31742647:+ chr3:169149755:- . NA TCGA-PG-A7D5-01A-11R-A34R-07 SORT1-PSMA5 7 20 chr1:109367408:- chr1:109402090:- FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 CDON-DCPS 5 23 chr11:125978304:- chr11:126345347:+ FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 BCAS3-VMP1 3 30 chr17:61040892:+ chr17:59817712:+ FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 PRR14L-CC2D1A 3 12 chr22:31738387:- chr19:13923333:+ INFRAME NA TCGA-PG-A7D5-01A-11R-A34R-07 ADCY9-CLUAP1 4 6 chr16:4113750:- chr16:3519903:+ INFRAME NA TCGA-PG-A7D5-01A-11R-A34R-07 KIF3B-REM1 4 6 chr20:32277765:+ chr20:31482287:+ . NA TCGA-PG-A7D5-01A-11R-A34R-07 ASNA1-DHPS 2 5 chr19:12738658:+ chr19:12680325:- INFRAME NA TCGA-PG-A7D5-01A-11R-A34R-07 RCL1-INSL6 1 6 chr9:4849550:+ chr9:5164265:- FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 PLCB4-MACROD2 1 4 chr20:9307898:+ chr20:15862745:+ INFRAME NA TCGA-PG-A7D5-01A-11R-A34R-07 CD109-SNU13 1 3 chr6:73697572:+ chr22:41680364:- FRAMESHIFT NA TCGA-PG-A7D5-01A-11R-A34R-07 SH3GLB2-CACNA1A 1 2 chr9:129028092:- chr19:13303884:- INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 MICALL1-SHC1 34 114 chr22:37906568:+ chr1:154966517:- INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 TRIM2-FAM71F1 15 54 chr4:153296036:+ chr7:128709085:+ . NA TCGA-PG-A914-01A-11R-A37O-07 IP6K2-PRKAR2A 12 45 chr3:48717157:- chr3:48756444:- . NA TCGA-PG-A914-01A-11R-A37O-07 AMZ2-KDM1B 9 53 chr17:68251178:+ chr6:18205537:+ INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 HNRNPA2B1-SKAP2 15 27 chr7:26192495:- chr7:26854890:- . NA TCGA-PG-A914-01A-11R-A37O-07 PICK1-MYPOP 11 41 chr22:38059345:+ chr19:45891323:- FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 SIPA1L3-RAB8A 7 44 chr19:37907358:+ chr19:16125470:+ . NA TCGA-PG-A914-01A-11R-A37O-07 ZNF587-AURKC 13 14 chr19:57850071:+ chr19:57231742:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 MAP4K4-REV1 11 20 chr2:101856138:+ chr2:99439310:- FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 P2RX5-MAP3K13 5 36 chr17:3688012:- chr3:185328624:+ . NA TCGA-PG-A914-01A-11R-A37O-07 MTERF2-CRY1 7 26 chr12:106985115:- chr12:107022192:- . NA TCGA-PG-A914-01A-11R-A37O-07 NCALD-UBR5 5 31 chr8:101719252:- chr8:102254514:- INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 OXSR1-DLEC1 5 29 chr3:38193418:+ chr3:38111677:+ . NA TCGA-PG-A914-01A-11R-A37O-07 TBC1D10A-ANK1 6 24 chr22:30304531:- chr8:41734069:- INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 MYO1E-TMCO3 6 19 chr15:59372498:- chr13:113520616:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 FBLIM1-EFHD2 5 22 chr1:15777287:+ chr1:15430096:+ . NA TCGA-PG-A914-01A-11R-A37O-07 AP2A2-NLRC5 7 9 chr11:959505:+ chr16:57033604:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 ZC3H4-APOBEC3A 1 29 chr19:47110895:- chr22:38957588:+ . NA TCGA-PG-A914-01A-11R-A37O-07 CTNNA1-WNT8A 5 12 chr5:138887642:+ chr5:138084498:+ INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 MPHOSPH9-CCDC92 5 11 chr12:123198247:- chr12:123937830:- FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 EIF2AK1-ANKS1B 4 11 chr7:6037424:- chr12:99246864:- FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 SPECC1-HM13 4 11 chr17:20232405:+ chr20:31527484:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 SMURF2-GNA13 5 5 chr17:64661829:- chr17:65018303:- FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 BMP2K-ANXA3 4 6 chr4:78776721:+ chr4:78573180:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 DMPK-RCN3 3 9 chr19:45779264:- chr19:49534193:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 BSCL2-C14orf159 3 8 chr11:62702468:- chr14:91196375:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 MACROD2-FLRT3 2 9 chr20:15933338:+ chr20:14327558:- . NA TCGA-PG-A914-01A-11R-A37O-07 LETM1-NELFA 1 8 chr4:1822181:- chr4:2023536:- . NA TCGA-PG-A914-01A-11R-A37O-07 NUMA1-TBC1D10A 1 8 chr11:72069842:- chr22:30293805:- . NA TCGA-PG-A914-01A-11R-A37O-07 TNFRSF13C-SREBF2 1 5 chr22:41926101:- chr22:41893117:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 BBOF1-DNAL1 1 4 chr14:74034171:+ chr14:73671542:+ FRAMESHIFT NA TCGA-PG-A914-01A-11R-A37O-07 NR2F6-UNC13A 1 4 chr19:17235499:- chr19:17658269:- INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 ANKRD33B-MAML1 1 2 chr5:10564833:+ chr5:179765326:+ INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 MAP3K13-P2RX5 1 2 chr3:185363368:+ chr17:3673877:- . NA TCGA-PG-A914-01A-11R-A37O-07 OSBP2-CHD1L 1 2 chr22:30741369:+ chr1:147252623:+ INFRAME NA TCGA-PG-A914-01A-11R-A37O-07 VILL-ITGA9 1 2 chr3:37993972:+ chr3:37777392:+ INFRAME NA TCGA-PG-A915-01A-11R-A37O-07 URI1-FOXA3 128 478 chr19:29986417:+ chr19:45872075:+ FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 CDON-NF2 48 169 chr11:125978304:- chr22:29694752:+ FRAMESHIFT Likely Oncogenic NA TCGA-PG-A915-01A-11R-A37O-07 SYMPK-DYRK1B 20 53 chr19:45863058:- chr19:39831968:- . NA TCGA-PG-A915-01A-11R-A37O-07 DDT-GHRL 21 37 chr22:23973768:- chr3:10286812:- FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 ASXL2-DENND2A 11 43 chr2:25878166:- chr7:140602542:- . Likely Oncogenic NA TCGA-PG-A915-01A-11R-A37O-07 DDT-SEC13 10 47 chr22:23973768:- chr3:10301374:- FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 ZNF709-ELL 12 32 chr19:12484655:- chr19:18446814:- FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 SUPT5H-C19orf57 2 36 chr19:39445965:+ chr19:13904913:- . NA TCGA-PG-A915-01A-11R-A37O-07 SUPT5H-MED29 7 14 chr19:39445965:+ chr19:39397457:+ INFRAME NA TCGA-PG-A915-01A-11R-A37O-07 TBC1D10A-TFAP2B 5 19 chr22:30304531:- chr6:50845701:+ . NA TCGA-PG-A915-01A-11R-A37O-07 SYMPK-RPRD2 5 15 chr19:45863058:- chr1:150417596:+ . NA TCGA-PG-A915-01A-11R-A37O-07 CCDC157-COL21A1 4 17 chr22:30362114:+ chr6:56077573:- . NA TCGA-PG-A915-01A-11R-A37O-07 DDTL-GHRL 4 17 chr22:23967561:+ chr3:10286812:- FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 NCOA3-MLLT6 3 19 chr20:47502019:+ chr17:38709173:+ . NA TCGA-PG-A915-01A-11R-A37O-07 SLC25A14-BCORL1 3 15 chrX:130350731:+ chrX:130050717:+ FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 DDTL-SEC13 2 12 chr22:23967561:+ chr3:10301374:- FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 CC2D1A-ST3GAL4 1 9 chr19:13929660:+ chr11:126406096:+ FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 MUT-CCDC130 2 5 chr6:49440206:- chr19:13751608:+ . NA TCGA-PG-A915-01A-11R-A37O-07 EFHC1-IL17A 2 3 chr6:52479787:+ chr6:52187603:+ FRAMESHIFT NA TCGA-PG-A915-01A-11R-A37O-07 NFX1-SPINK4 1 4 chr9:33344188:+ chr9:33245112:+ INFRAME NA TCGA-PG-A915-01A-11R-A37O-07 CC2D1A-MRI1 1 3 chr19:13912593:+ chr19:13772121:+ FRAMESHIFT NA TCGA-QF-A5YT-01A-11R-A31O-07 SNHG16-RRP1 1 1 chr17:76557857:+ chr21:43802274:+ . NA TCGA-QS-A8F1-01A-21R-A37O-07 GAGE2E-GLOD5 10 12 chrX:49345922:+ chrX:48773310:+ FRAMESHIFT NA TCGA-SL-A6J9-01A-11R-A31O-07 IGHMBP2-GPR137 4 18 chr11:68911603:+ chr11:64288340:+ INFRAME NA TCGA-SL-A6J9-01A-11R-A31O-07 HID1-HN1 2 13 chr17:74958141:- chr17:75136250:- INFRAME NA TCGA-SL-A6J9-01A-11R-A31O-07 COG4-VAC14 3 7 chr16:70490330:- chr16:70772172:- FRAMESHIFT NA TCGA-SL-A6JA-01A-11R-A31O-07 DICER1-HSD17B4 1 1 chr14:95157230:- chr5:119536423:+ . Likely Oncogenic NA TCGA-N5-A4RA-01A-11R-A28V-07 NUP160-RBM6 28 120 chr11:47847848:- chr3:50077008:+ FRAMESHIFT NA TCGA-N5-A4RA-01A-11R-A28V-07 RNF13-TM4SF4 2 57 chr3:149872154:+ chr3:149487619:+ INFRAME NA TCGA-N5-A4RA-01A-11R-A28V-07 BRD4-GNAT1 11 5 chr19:15332290:- chr3:50193133:+ . Oncogenic NA TCGA-N5-A4RA-01A-11R-A28V-07 NSD2-NUP210L 1 45 chr4:1901251:+ chr1:154012370:- INFRAME NA TCGA-N5-A4RA-01A-11R-A28V-07 UBE2L3-APOL1 5 29 chr22:21611043:+ chr22:36261596:+ INFRAME NA TCGA-N5-A4RA-01A-11R-A28V-07 SLMAP-CYP11A1 6 9 chr3:57757849:+ chr15:74348055:- FRAMESHIFT NA TCGA-N5-A4RA-01A-11R-A28V-07 FCHSD2-CDC42EP2 3 20 chr11:73140031:- chr11:65320544:+ . NA TCGA-N5-A4RA-01A-11R-A28V-07 GNPTG-RAB40C 4 14 chr16:1352306:+ chr16:625432:+ FRAMESHIFT NA TCGA-N5-A4RA-01A-11R-A28V-07 UQCC1-SHISA4 7 2 chr20:35411940:- chr1:201889445:+ FRAMESHIFT NA TCGA-N5-A4RA-01A-11R-A28V-07 NUP210-MAST1 4 10 chr3:13377456:- chr19:12851934:+ INFRAME NA TCGA-N5-A4RA-01A-11R-A28V-07 ATP5G1-KPNB1 2 16 chr17:48895334:+ chr17:47676409:+ FRAMESHIFT NA TCGA-N5-A4RA-01A-11R-A28V-07 SLIT3-SDCBP 3 9 chr5:168748302:- chr8:58581686:+ INFRAME NA TCGA-N5-A4RA-01A-11R-A28V-07 EDF1-ASPSCR1 2 1 chr9:136862906:- chr17:82016476:+ INFRAME NA TCGA-N5-A4RA-01A-11R-A28V-07 SEPT9-MGAT5B 1 3 chr17:77402703:+ chr17:76872851:+ FRAMESHIFT NA TCGA-N5-A4RD-01A-11R-A28V-07 CDK16-TIMP1 148 358 chrX:47219105:+ chrX:47585205:+ . NA TCGA-N5-A4RD-01A-11R-A28V-07 TPX2-DEFB118 15 122 chr20:31771682:+ chr20:31372857:+ FRAMESHIFT NA TCGA-N5-A4RD-01A-11R-A28V-07 SMG5-MEF2D 6 20 chr1:156259005:- chr1:156469020:- FRAMESHIFT NA TCGA-N5-A4RD-01A-11R-A28V-07 RTN3-FLJ12825 2 23 chr11:63721032:+ chr12:54118604:+ . NA TCGA-N5-A4RD-01A-11R-A28V-07 PACS2-DSG2 2 22 chr14:105352467:+ chr18:31524703:+ INFRAME NA TCGA-N5-A4RD-01A-11R-A28V-07 UBXN1-WDR74 2 12 chr11:62677518:- chr11:62839867:- . NA TCGA-N5-A4RD-01A-11R-A28V-07 NUMB-DNM2 2 9 chr14:73355626:- chr19:10782960:+ FRAMESHIFT NA TCGA-N5-A4RD-01A-11R-A28V-07 SIK3-SRSF9 2 7 chr11:117098143:- chr12:120465787:- INFRAME NA TCGA-N5-A4RD-01A-11R-A28V-07 LPIN1-GREB1 1 2 chr2:11713812:+ chr2:11576353:+ FRAMESHIFT NA TCGA-N5-A4RD-01A-11R-A28V-07 RMND1-SYNE1 1 2 chr6:151417279:- chr6:152310873:- INFRAME NA TCGA-N5-A4RF-01A-11R-A28V-07 LPP-ZNRF1 12 98 chr3:188225527:+ chr16:75093572:+ . NA TCGA-N5-A4RJ-01A-11R-A28V-07 THAP12-TIMP3 8 9 chr11:76360956:- chr22:32849452:+ FRAMESHIFT NA TCGA-N5-A4RJ-01A-11R-A28V-07 UBASH3A-SFTA2 2 26 chr21:42437580:+ chr6:30931795:- INFRAME NA TCGA-N5-A4RJ-01A-11R-A28V-07 DGAT1-UBASH3A 1 5 chr8:144326437:- chr21:42437488:+ FRAMESHIFT NA TCGA-N5-A4RJ-01A-11R-A28V-07 EPS15-CCT4 2 1 chr1:51402435:- chr2:61869553:- FRAMESHIFT NA TCGA-N5-A4RM-01A-11R-A28V-07 ACBD3-RAB5B 8 86 chr1:226159184:- chr12:55996523:+ . NA TCGA-N5-A4RM-01A-11R-A28V-07 ELL-ARL4D 4 8 chr19:18521921:- chr17:43399661:+ . NA TCGA-N5-A4RM-01A-11R-A28V-07 RNF38-GRHPR 3 6 chr9:36400936:- chr9:37425922:+ . NA TCGA-N5-A4RN-01A-12R-A28V-07 SMIM4-STAB1 1 7 chr3:52536906:+ chr3:52501166:+ FRAMESHIFT NA TCGA-N5-A4RN-01A-12R-A28V-07 TMOD3-SPG11 1 5 chr15:51829836:+ chr15:44585850:- . NA TCGA-N5-A4RO-01A-11R-A28V-07 MAU2-MAP1S 47 274 chr19:19336187:+ chr19:17734273:+ INFRAME NA TCGA-N5-A4RO-01A-11R-A28V-07 CAMK2G-MYOZ1 33 171 chr10:73837468:- chr10:73640035:- . NA TCGA-N5-A4RO-01A-11R-A28V-07 WFDC2-COMMD7 11 50 chr20:45480094:+ chr20:32728142:- . NA TCGA-N5-A4RO-01A-11R-A28V-07 NCKAP5L-C12orf60 4 53 chr12:49828322:- chr12:14904007:+ . NA TCGA-N5-A4RO-01A-11R-A28V-07 TMTC2-SOCS2 3 15 chr12:82687669:+ chr12:93572685:+ . NA TCGA-N5-A4RO-01A-11R-A28V-07 PDAP1-ZNF789 1 20 chr7:99397862:- chr7:99479661:+ FRAMESHIFT NA TCGA-N5-A4RO-01A-11R-A28V-07 ZNF718-SLC25A33 3 6 chr4:131505:+ chr1:9567284:+ FRAMESHIFT NA TCGA-N5-A4RO-01A-11R-A28V-07 PRDX6-DARS2 2 6 chr1:173481482:+ chr1:173826687:+ FRAMESHIFT NA TCGA-N5-A4RO-01A-11R-A28V-07 CD44-CAPRIN1 2 5 chr11:35139370:+ chr11:34089395:+ INFRAME NA TCGA-N5-A4RO-01A-11R-A28V-07 CECR2-DGCR2 1 8 chr22:17369909:+ chr22:19089490:- FRAMESHIFT NA TCGA-N5-A4RO-01A-11R-A28V-07 WRN-LETM2 1 7 chr8:31033973:+ chr8:38387950:+ . NA TCGA-N5-A4RO-01A-11R-A28V-07 NCKAP5L-PDE6H 1 2 chr12:49828322:- chr12:14977972:+ . NA TCGA-N5-A4RS-01A-11R-A28V-07 OCLN-NUDT3 9 14 chr5:69504294:+ chr6:34295685:- FRAMESHIFT NA TCGA-N5-A4RS-01A-11R-A28V-07 RNF2-MRC2 3 11 chr1:185087640:+ chr17:62664548:+ FRAMESHIFT NA TCGA-N5-A4RS-01A-11R-A28V-07 CEP68-NR0B2 1 2 chr2:65056524:+ chr1:26912086:- . NA TCGA-N5-A4RT-01A-11R-A28V-07 TPX2-DEFB123 52 384 chr20:31783921:+ chr20:31450029:+ FRAMESHIFT NA TCGA-N5-A4RT-01A-11R-A28V-07 PPP6R2-ZDHHC6 10 160 chr22:50406875:+ chr10:112430907:- FRAMESHIFT NA TCGA-N5-A4RT-01A-11R-A28V-07 RHOT2-DPEP1 7 68 chr16:673205:+ chr16:89637634:+ . NA TCGA-N5-A4RT-01A-11R-A28V-07 TBC1D23-TMEM30CP 3 16 chr3:100290701:+ chr3:100189941:+ . NA TCGA-N5-A4RT-01A-11R-A28V-07 TRAF3-WDR20 4 10 chr14:102903429:+ chr14:102194938:+ INFRAME NA TCGA-N5-A4RT-01A-11R-A28V-07 ALG12-DENND6B 2 7 chr22:49904179:- chr22:50319003:- FRAMESHIFT NA TCGA-N5-A4RT-01A-11R-A28V-07 NRXN2-NSD1 1 8 chr11:64620294:- chr5:177239756:+ INFRAME Likely Oncogenic NA TCGA-N5-A4RT-01A-11R-A28V-07 RAD9A-KDM2A 2 4 chr11:67321333:+ chr11:67180079:+ . NA TCGA-N5-A4RT-01A-11R-A28V-07 HDAC9-C1orf105 1 6 chr7:18496324:+ chr1:172465299:+ FRAMESHIFT NA TCGA-N5-A4RT-01A-11R-A28V-07 NKAIN3-WRN 1 4 chr8:62249127:+ chr8:31172995:+ INFRAME NA TCGA-N5-A4RT-01A-11R-A28V-07 ERVK3-1-ZNF544 1 3 chr19:58306216:+ chr19:58277183:+ . NA TCGA-N5-A4RU-01A-31R-A28V-07 NUDT3-TCP11 9 36 chr6:34392264:- chr6:35129182:- FRAMESHIFT NA TCGA-N5-A4RU-01A-31R-A28V-07 GRB2-ACOX1 1 26 chr17:75393551:- chr17:75949897:- FRAMESHIFT NA TCGA-N5-A4RU-01A-31R-A28V-07 ASCC1-MICU1 1 8 chr10:72213187:- chr10:72423371:- FRAMESHIFT NA TCGA-N5-A4RV-01A-21R-A28V-07 KARS-PLGRKT 4 41 chr16:75640184:- chr9:5361888:- FRAMESHIFT NA TCGA-N5-A4RV-01A-21R-A28V-07 TTC7B-HTRA3 4 10 chr14:90744792:- chr4:8282437:+ FRAMESHIFT NA TCGA-N5-A4RV-01A-21R-A28V-07 NPRL3-PRR35 1 7 chr16:110525:- chr16:564674:+ INFRAME NA TCGA-N5-A59E-01A-11R-A28V-07 KHDRBS1-NDC1 4 23 chr1:32014377:+ chr1:53772489:- FRAMESHIFT NA TCGA-N5-A59E-01A-11R-A28V-07 OSBPL10-STX8 2 22 chr3:31876433:- chr17:9250645:- FRAMESHIFT NA TCGA-N5-A59E-01A-11R-A28V-07 PAIP2-CXXC5 4 10 chr5:139341980:+ chr5:139680364:+ . NA TCGA-N5-A59E-01A-11R-A28V-07 IRAK1BP1-NOL4L 2 11 chr6:78903110:+ chr20:32548886:- . NA TCGA-N5-A59E-01A-11R-A28V-07 USP38-TMEM154 3 4 chr4:143187961:+ chr4:152628561:- INFRAME NA TCGA-N5-A59E-01A-11R-A28V-07 WIPF2-STARD3 1 6 chr17:40265146:+ chr17:39653481:+ . NA TCGA-N5-A59E-01A-11R-A28V-07 CAMK2D-ERMAP 1 5 chr4:113460147:- chr1:42825623:+ . NA TCGA-N5-A59E-01A-11R-A28V-07 TOR1AIP1-EIF1 1 2 chr1:179908673:+ chr17:41689778:+ INFRAME NA TCGA-N5-A59E-01A-11R-A28V-07 PPP6R3-GAL 1 1 chr11:68571104:+ chr11:68690917:+ INFRAME NA TCGA-N5-A59F-01A-11R-A28V-07 FANCI-HADHB 9 20 chr15:89274304:+ chr2:26269953:+ INFRAME NA TCGA-N5-A59F-01A-11R-A28V-07 CUEDC2-POLR3A 5 12 chr10:102432526:- chr10:77980273:- . NA TCGA-N5-A59F-01A-11R-A28V-07 STRA6-NDUFAF1 3 14 chr15:74183856:- chr15:41387593:- FRAMESHIFT NA TCGA-N5-A59F-01A-11R-A28V-07 SKI-ATAD3A 3 11 chr1:2229735:+ chr1:1518921:+ INFRAME NA TCGA-N5-A59F-01A-11R-A28V-07 CEP295NL-G6PC3 2 11 chr17:78873819:- chr17:44074160:+ . NA TCGA-N5-A59F-01A-11R-A28V-07 TIMP2-G6PC3 2 11 chr17:78873819:- chr17:44074160:+ FRAMESHIFT NA TCGA-N5-A59F-01A-11R-A28V-07 DMD-TSPAN7 1 2 chrX:32216916:- chrX:38666121:+ INFRAME NA TCGA-N5-A59F-01A-11R-A28V-07 NXF1-IDH3B 1 1 chr11:62800377:- chr20:2658837:- FRAMESHIFT NA TCGA-N6-A4V9-01A-11R-A28V-07 MCM5-HMOX1 15 130 chr22:35400605:+ chr22:35393468:+ FRAMESHIFT NA TCGA-N6-A4V9-01A-11R-A28V-07 MARK3-TSGA10IP 9 59 chr14:103457212:+ chr11:65945715:+ INFRAME NA TCGA-N6-A4V9-01A-11R-A28V-07 LMBR1L-TUBA1B 9 39 chr12:49103687:- chr12:49129722:- FRAMESHIFT NA TCGA-N6-A4V9-01A-11R-A28V-07 BIRC6-SLC30A6 5 49 chr2:32549481:+ chr2:32184273:+ INFRAME NA TCGA-N6-A4V9-01A-11R-A28V-07 TBC1D8B-RNF128 1 3 chrX:106802983:+ chrX:106785065:+ FRAMESHIFT NA TCGA-N6-A4VC-01A-11R-A28V-07 DIXDC1-C11orf1 15 141 chr11:111937559:+ chr11:111883136:+ INFRAME NA TCGA-N6-A4VC-01A-11R-A28V-07 ZNF567-HCST 4 8 chr19:36694876:+ chr19:35903351:+ FRAMESHIFT NA TCGA-N6-A4VC-01A-11R-A28V-07 B4GALT7-NSD1 2 5 chr5:177600260:+ chr5:177238237:+ FRAMESHIFT Likely Oncogenic NA TCGA-N6-A4VE-01A-11R-A28V-07 FUT2-RASIP1 12 185 chr19:48696079:+ chr19:48724960:- . NA TCGA-N6-A4VE-01A-11R-A28V-07 BCL2L13-DGCR14 22 91 chr22:17683321:+ chr22:19137432:- INFRAME NA TCGA-N6-A4VE-01A-11R-A28V-07 C6orf106-FKBP5 10 77 chr6:34696446:- chr6:35642843:- . NA TCGA-N6-A4VE-01A-11R-A28V-07 PDRG1-NOL4L 4 91 chr20:31948808:- chr20:32511456:- INFRAME NA TCGA-N6-A4VE-01A-11R-A28V-07 EML1-CCNK 7 32 chr14:99901039:+ chr14:99507076:+ FRAMESHIFT NA TCGA-N6-A4VE-01A-11R-A28V-07 MAPKAPK3-S1PR5 1 26 chr3:50617784:+ chr19:10515029:- INFRAME NA TCGA-N6-A4VE-01A-11R-A28V-07 TPTEP1-CECR7 2 21 chr22:16602215:+ chr22:17044873:+ . NA TCGA-N6-A4VE-01A-11R-A28V-07 CSTF1-RTFDC1 1 17 chr20:56395721:+ chr20:56513315:+ FRAMESHIFT NA TCGA-N6-A4VE-01A-11R-A28V-07 PSMD8-TJP3 2 7 chr19:38374961:+ chr19:3728424:+ INFRAME NA TCGA-N6-A4VE-01A-11R-A28V-07 IFT140-ABCA3 1 7 chr16:1607120:- chr16:2319840:- FRAMESHIFT NA TCGA-N6-A4VF-01A-31R-A28V-07 ZNF207-RHOT1 84 253 chr17:32351912:+ chr17:32253085:+ FRAMESHIFT NA TCGA-N6-A4VF-01A-31R-A28V-07 NARF-P4HB 2 20 chr17:82481211:+ chr17:81859387:- INFRAME NA TCGA-N6-A4VF-01A-31R-A28V-07 TLCD1-CRYBA1 3 6 chr17:28724739:- chr17:29252064:+ INFRAME NA TCGA-N6-A4VG-01A-31R-A28V-07 SMARCA4-RNF216 5 41 chr19:11041560:+ chr7:5761138:- . Likely Oncogenic NA TCGA-N6-A4VG-01A-31R-A28V-07 YTHDF2-EYA3 4 38 chr1:28743986:+ chr1:27978474:- FRAMESHIFT NA TCGA-N6-A4VG-01A-31R-A28V-07 NVL-WDR26 2 20 chr1:224311800:- chr1:224389860:- FRAMESHIFT NA TCGA-N6-A4VG-01A-31R-A28V-07 WDR82-GLT8D1 3 16 chr3:52284528:- chr3:52700496:- . NA TCGA-N6-A4VG-01A-31R-A28V-07 KPNA3-SPRYD7 3 15 chr13:49792438:- chr13:49931134:- FRAMESHIFT NA TCGA-N6-A4VG-01A-31R-A28V-07 PTPN11-CUX2 3 9 chr12:112473040:+ chr12:111341780:+ INFRAME NA TCGA-N6-A4VG-01A-31R-A28V-07 PITPNM2-MPHOSPH9 2 6 chr12:122992499:- chr12:123203375:- FRAMESHIFT NA TCGA-N6-A4VG-01A-31R-A28V-07 ORAI2-SH2B2 1 4 chr7:102439181:+ chr7:102314512:+ FRAMESHIFT NA TCGA-N6-A4VG-01A-31R-A28V-07 RRAGC-RHBDL2 1 3 chr1:38851615:- chr1:38911434:- INFRAME NA TCGA-N7-A4Y5-01A-12R-A28V-07 EIF2AK4-IVD 6 19 chr15:39992229:+ chr15:40435417:+ INFRAME NA TCGA-N7-A4Y5-01A-12R-A28V-07 TRA2B-FBXO21 2 4 chr3:185937825:- chr12:117155948:- FRAMESHIFT NA TCGA-N7-A4Y8-01A-11R-A28V-07 CAPZB-TMCO4 4 17 chr1:19485436:- chr1:19700885:- FRAMESHIFT NA TCGA-N7-A4Y8-01A-11R-A28V-07 ZMYND8-WFDC2 2 6 chr20:47347856:- chr20:45479942:+ INFRAME NA TCGA-N7-A4Y8-01A-11R-A28V-07 PVR-SIRT2 1 8 chr19:44644175:+ chr19:38881491:- INFRAME NA TCGA-N7-A4Y8-01A-11R-A28V-07 KIAA1683-FKBP8 1 2 chr19:18264924:- chr19:18541995:- . NA TCGA-N7-A4Y8-01A-11R-A28V-07 SEPT6-RPL39 1 1 chrX:119663482:- chrX:119790011:- FRAMESHIFT NA TCGA-N7-A59B-01A-11R-A28V-07 SBNO2-C1D 5 11 chr19:1147309:- chr2:68047319:- INFRAME NA TCGA-N7-A59B-01A-11R-A28V-07 SP1-IGFBP6 1 26 chr12:53383622:+ chr12:53100712:+ INFRAME NA TCGA-N7-A59B-01A-11R-A28V-07 AP5B1-CFL1 4 11 chr11:65780442:- chr11:65856242:- INFRAME NA TCGA-N7-A59B-01A-11R-A28V-07 FAM13B-ECSCR 1 13 chr5:138018302:- chr5:139454923:- INFRAME NA TCGA-N7-A59B-01A-11R-A28V-07 HSPG2-SH3BGRL3 1 1 chr1:21881339:- chr1:26280765:+ INFRAME NA TCGA-N8-A4PI-01A-21R-A28V-07 TWF2-ALAS1 1 26 chr3:52238992:- chr3:52208083:+ INFRAME NA TCGA-N8-A4PI-01A-21R-A28V-07 ITGB8-ABCB5 4 11 chr7:20381885:+ chr7:20775978:+ . NA TCGA-N8-A4PI-01A-21R-A28V-07 SLC3A2-ASRGL1 2 18 chr11:62871669:+ chr11:62389133:+ FRAMESHIFT NA TCGA-N8-A4PI-01A-21R-A28V-07 ARFGEF1-PPP1R42 1 16 chr8:67251299:- chr8:67014592:- INFRAME NA TCGA-N8-A4PI-01A-21R-A28V-07 NOTCH2NL-HFE2 1 12 chr1:146228709:- chr1:146019734:- . NA TCGA-N8-A4PI-01A-21R-A28V-07 CCND3-LUZP1 2 4 chr6:42048501:- chr1:23089053:- . NA TCGA-N8-A4PI-01A-21R-A28V-07 INTS6-NEK5 2 2 chr13:51451025:- chr13:52037218:- . NA TCGA-N8-A4PI-01A-21R-A28V-07 TRIM16-TOP3A 1 6 chr17:15651091:- chr17:18308941:- INFRAME NA TCGA-N8-A4PL-01A-11R-A28V-07 MSI2-CISD3 38 178 chr17:57401471:+ chr17:38730760:+ INFRAME NA TCGA-N8-A4PL-01A-11R-A28V-07 KIF3C-SRM 4 33 chr2:25980373:- chr1:11059345:- FRAMESHIFT NA TCGA-N8-A4PL-01A-11R-A28V-07 CABIN1-SLC2A11 2 19 chr22:24119698:+ chr22:23882459:+ FRAMESHIFT NA TCGA-N8-A4PL-01A-11R-A28V-07 RAB33B-NAA15 2 8 chr4:139454444:+ chr4:139334174:+ INFRAME NA TCGA-N8-A4PL-01A-11R-A28V-07 GRAMD4-DRC3 1 9 chr22:46675552:+ chr17:17992765:+ INFRAME NA TCGA-N8-A4PL-01A-11R-A28V-07 ZNF675-SLC27A1 1 8 chr19:23687031:- chr19:17470540:+ . NA TCGA-N8-A4PM-01A-11R-A28V-07 TM9SF4-DEFB123 69 487 chr20:32155186:+ chr20:31450029:+ FRAMESHIFT NA TCGA-N8-A4PM-01A-11R-A28V-07 PREX1-KCNB1 16 98 chr20:48745025:- chr20:49310799:- . NA TCGA-N8-A4PM-01A-11R-A28V-07 MSH2-SPTLC1 5 11 chr2:47445657:+ chr9:92038365:- FRAMESHIFT Likely Oncogenic NA TCGA-N8-A4PM-01A-11R-A28V-07 LUC7L3-MYCBPAP 1 8 chr17:50719831:+ chr17:50516570:+ FRAMESHIFT NA TCGA-N8-A4PM-01A-11R-A28V-07 ROR2-FAM50B 1 6 chr9:91883258:- chr6:3849789:+ . NA TCGA-N8-A4PM-01A-11R-A28V-07 WIPF2-XYLT2 1 4 chr17:40219492:+ chr17:50353630:+ . NA TCGA-N8-A4PM-01A-11R-A28V-07 BCKDHA-CCDC97 1 3 chr19:41414157:+ chr19:41316384:+ INFRAME NA TCGA-N8-A4PN-01A-11R-A28V-07 SERINC3-NCOA5 30 186 chr20:44511289:- chr20:46062889:- INFRAME NA TCGA-N8-A4PN-01A-11R-A28V-07 DLGAP4-TP53TG5 39 149 chr20:36462599:+ chr20:45377613:- FRAMESHIFT NA TCGA-N8-A4PN-01A-11R-A28V-07 FAM212B-BCAS4 31 126 chr1:111739186:- chr20:50876486:+ INFRAME NA TCGA-N8-A4PN-01A-11R-A28V-07 HNRNPM-MCOLN1 23 85 chr19:8462581:+ chr19:7527520:+ FRAMESHIFT NA TCGA-N8-A4PN-01A-11R-A28V-07 TSHZ2-TOX2 12 31 chr20:52973333:+ chr20:43973367:+ FRAMESHIFT NA TCGA-N8-A4PN-01A-11R-A28V-07 PAK4-RPGR 2 21 chr19:39125919:+ chrX:38291484:- . NA TCGA-N8-A4PN-01A-11R-A28V-07 RPN2-ZBTB46 4 9 chr20:37230059:+ chr20:63790790:- . NA TCGA-N8-A4PN-01A-11R-A28V-07 TMEM41A-EPHA2 4 6 chr3:185488945:- chr1:16150963:- . NA TCGA-N8-A4PN-01A-11R-A28V-07 MAP1S-CRTC1 1 7 chr19:17733428:+ chr19:18742910:+ INFRAME NA TCGA-N8-A4PN-01A-11R-A28V-07 OBSL1-IGF2 1000 1000 chr2:219558331:- chr11:2130177:- . NA TCGA-N8-A4PO-01A-11R-A28V-07 ZNF638-TRIM55 13 84 chr2:71408247:+ chr8:66174471:+ INFRAME NA TCGA-N8-A4PO-01A-11R-A28V-07 CDC27-PTPRS 5 48 chr17:47181562:- chr19:5159104:- . NA TCGA-N8-A4PO-01A-11R-A28V-07 THOC1-THADA 11 19 chr18:252539:- chr2:43428231:- INFRAME NA TCGA-N8-A4PO-01A-11R-A28V-07 NBAS-SPIRE1 2 5 chr2:15415546:- chr18:12512531:- INFRAME NA TCGA-N8-A4PO-01A-11R-A28V-07 EPB41L1-PHF20 1 7 chr20:36112480:+ chr20:35842573:+ . NA TCGA-N8-A4PO-01A-11R-A28V-07 SLC12A8-PARD6G 1 1 chr3:125177743:- chr18:80202932:- FRAMESHIFT NA TCGA-N8-A4PP-01A-11R-A28V-07 PPIG-SSB 42 208 chr2:169604261:+ chr2:169792573:+ . NA TCGA-N8-A4PP-01A-11R-A28V-07 DPY19L3-TDRD12 7 90 chr19:32411372:+ chr19:32731725:+ INFRAME NA TCGA-N8-A4PP-01A-11R-A28V-07 RAB5B-DGKA 23 14 chr12:55974139:+ chr12:55936423:+ . NA TCGA-N8-A4PP-01A-11R-A28V-07 JAGN1-CPNE9 10 54 chr3:9893389:+ chr3:9729370:+ . NA TCGA-N8-A4PP-01A-11R-A28V-07 ZNF546-HNRNPD 7 42 chr19:40008565:+ chr4:82359639:- INFRAME NA TCGA-N8-A4PP-01A-11R-A28V-07 ENSAP2-KLHDC9 6 20 chr14:82692707:- chr1:161100061:+ . NA TCGA-N8-A4PP-01A-11R-A28V-07 SPON1-THAP2 1 36 chr11:13982953:+ chr12:71674203:+ FRAMESHIFT NA TCGA-N8-A4PP-01A-11R-A28V-07 RAB7A-TRMT1 3 7 chr3:128807671:+ chr19:13110306:- INFRAME NA TCGA-N8-A4PP-01A-11R-A28V-07 RCL1-SMCP 3 5 chr9:4841357:+ chr1:152884403:+ . NA TCGA-N8-A4PP-01A-11R-A28V-07 ZNF430-OR7E24 3 4 chr19:21034184:+ chr19:9251085:+ FRAMESHIFT NA TCGA-N8-A4PP-01A-11R-A28V-07 ADCY9-NLRC3 2 6 chr16:4113750:- chr16:3544329:- FRAMESHIFT NA TCGA-N8-A4PP-01A-11R-A28V-07 CRY2-C11orf49 2 5 chr11:45858873:+ chr11:47052388:+ INFRAME NA TCGA-N8-A4PP-01A-11R-A28V-07 SSX2IP-WDPCP 1 1 chr1:84690154:- chr2:63711591:- . NA TCGA-N8-A4PQ-01A-11R-A28V-07 RARA-SLC9A3R1 31 153 chr17:40352507:+ chr17:74762012:+ INFRAME NA TCGA-N8-A4PQ-01A-11R-A28V-07 MPRIP-HOXB13 14 112 chr17:17078076:+ chr17:48727043:- FRAMESHIFT NA TCGA-N8-A4PQ-01A-11R-A28V-07 ZNF423-CCAR1 2 106 chr16:49730771:- chr10:68786136:+ INFRAME NA TCGA-N8-A4PQ-01A-11R-A28V-07 ACOT11-GIP 10 37 chr1:54542437:+ chr17:48967253:- . NA TCGA-N8-A4PQ-01A-11R-A28V-07 DGKD-SLC25A17 9 40 chr2:233390483:+ chr22:40779125:- INFRAME NA TCGA-N8-A4PQ-01A-11R-A28V-07 TMX2-MED19 5 36 chr11:57712807:+ chr11:57705229:- FRAMESHIFT NA TCGA-N8-A4PQ-01A-11R-A28V-07 GNA13-MXRA7 6 31 chr17:65053502:- chr17:76685165:- FRAMESHIFT NA TCGA-N8-A4PQ-01A-11R-A28V-07 MKL1-INPP5D 5 18 chr22:40552106:- chr2:233169305:+ . NA TCGA-N8-A4PQ-01A-11R-A28V-07 RASA4-DRICH1 2 9 chr7:102608761:- chr22:23622176:- INFRAME NA TCGA-N8-A4PQ-01A-11R-A28V-07 TLK2-FN3KRP 1 13 chr17:62481206:+ chr17:82718906:+ INFRAME NA TCGA-N8-A4PQ-01A-11R-A28V-07 SOX13-PPFIA4 2 7 chr1:204073711:+ chr1:203053753:+ . NA TCGA-N8-A4PQ-01A-11R-A28V-07 NCOR1-PRR11 1 9 chr17:16186554:- chr17:59169748:+ FRAMESHIFT Likely Oncogenic NA TCGA-N8-A4PQ-01A-11R-A28V-07 FCHSD2-ABL1 2 3 chr11:73083695:- chr9:130854064:+ FRAMESHIFT Likely Oncogenic NA TCGA-N8-A4PQ-01A-11R-A28V-07 NCOR1-MPRIP 1 6 chr17:16171803:- chr17:17075710:+ INFRAME Likely Oncogenic NA TCGA-N8-A4PQ-01A-11R-A28V-07 TANGO6-CARMIL2 1 3 chr16:68843711:+ chr16:67645540:+ INFRAME NA TCGA-N8-A4PQ-01A-11R-A28V-07 GPBP1L1-MOB3C 1 2 chr1:45686412:- chr1:46610204:- . NA TCGA-N8-A4PQ-01A-11R-A28V-07 UVRAG-SPCS2 1 1 chr11:75861780:+ chr11:74976857:+ FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 LSM12-ITGA2B 38 56 chr17:44063801:- chr17:44372423:- INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 SNX11-SNF8 27 100 chr17:48107838:+ chr17:48943975:- . NA TCGA-N8-A56S-01A-11R-A28V-07 AP1S1-PTOV1 38 29 chr7:101154517:+ chr19:49854406:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 NFX1-DNAJA1 14 48 chr9:33290597:+ chr9:33029885:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 NUP188-TBC1D13 14 34 chr9:128959134:+ chr9:128803250:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 DNAJC4-RARRES3 12 41 chr11:64230940:+ chr11:63539516:+ FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 KANSL1-SPOP 4 73 chr17:46223671:- chr17:49622876:- . Likely Oncogenic NA TCGA-N8-A56S-01A-11R-A28V-07 BPTF-NOL11 7 42 chr17:67866687:+ chr17:67743743:+ FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 ASB1-RBM44 5 40 chr2:238433695:+ chr2:237833997:+ FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 DSTYK-CSRP1 7 29 chr1:205211271:- chr1:201485376:- FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 LRP6-DUSP16 7 21 chr12:12244262:- chr12:12521463:- . NA TCGA-N8-A56S-01A-11R-A28V-07 ACOT7-DNAJC11 5 27 chr1:6281102:- chr1:6667810:- INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 LUC7L3-CEP250 5 24 chr17:50746702:+ chr20:35490637:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 SLC39A11-CA11 6 20 chr17:73084808:- chr19:48640280:- INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 RMI2-CLEC16A 3 18 chr16:11345766:+ chr16:11120615:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 SCRN2-GIP 2 22 chr17:47838270:- chr17:48964480:- FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 ZDHHC7-ACAD11 5 9 chr16:85011286:- chr3:132631479:- . NA TCGA-N8-A56S-01A-11R-A28V-07 SLC1A6-AKAP8L 1 22 chr19:14964319:- chr19:15380612:- INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 KIF24-ZCCHC7 3 12 chr9:34286617:- chr9:37327799:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 CLCN4-SHROOM2 3 11 chrX:10187614:+ chrX:9873652:+ FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 DNAJC28-GART 1 19 chr21:33491602:- chr21:33506104:- . NA TCGA-N8-A56S-01A-11R-A28V-07 ELK3-PGAM1P5 3 11 chr12:96223773:+ chr12:95649328:+ . NA TCGA-N8-A56S-01A-11R-A28V-07 CDC6-LRRC59 3 10 chr17:40294056:+ chr17:50388132:- FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 ZHX2-PPM1B 3 9 chr8:122781946:+ chr2:44201186:+ . NA TCGA-N8-A56S-01A-11R-A28V-07 ACTN4-SPINT2 3 8 chr19:38718074:+ chr19:38283627:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 SENP2-MAP3K13 3 7 chr3:185626393:+ chr3:185463550:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 ASB1-RAMP1 2 10 chr2:238433695:+ chr2:237911528:+ INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 ATP6V0A4-TM4SF20 3 3 chr7:138721897:- chr2:227370980:- INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 PHACTR4-MED18 1 10 chr1:28407463:+ chr1:28330597:+ . NA TCGA-N8-A56S-01A-11R-A28V-07 VMP1-PRR11 1 10 chr17:59707748:+ chr17:59169748:+ . NA TCGA-N8-A56S-01A-11R-A28V-07 KCNQ1-B4GALNT4 1 7 chr11:2588854:+ chr11:372662:+ FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 TRABD2B-PDZK1P1 1 7 chr1:47994034:- chr1:148003982:- . NA TCGA-N8-A56S-01A-11R-A28V-07 PTCD1-PEX11G 1 6 chr7:99429103:- chr19:7482211:- INFRAME NA TCGA-N8-A56S-01A-11R-A28V-07 GLB1-SUSD5 1 3 chr3:33046120:- chr3:33175074:- FRAMESHIFT NA TCGA-N8-A56S-01A-11R-A28V-07 FBN2-TMPRSS6 1000 1000 chr5:128374681:- chr22:37103522:- INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 YWHAE-GCGR 25 149 chr17:1400047:- chr17:81808842:+ . NA TCGA-N9-A4PZ-01A-22R-A28V-07 SETD2-PALMD 38 76 chr3:47163854:- chr1:99694019:+ FRAMESHIFT Likely Oncogenic NA TCGA-N9-A4PZ-01A-22R-A28V-07 PPP1R12C-CLEC11A 22 37 chr19:55098784:- chr19:50723905:+ INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 EIF4G3-LAMC1 16 51 chr1:21050866:- chr1:183116577:+ FRAMESHIFT NA TCGA-N9-A4PZ-01A-22R-A28V-07 EPHA2-LSM14B 10 51 chr1:16148378:- chr20:62124617:+ INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 IVD-ECE1 8 44 chr15:40413087:+ chr1:21260392:- INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 MIGA2-P4HB 11 23 chr9:129063631:+ chr17:81847347:- INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 NOSIP-RCN3 5 41 chr19:49559934:- chr19:49537033:+ FRAMESHIFT NA TCGA-N9-A4PZ-01A-22R-A28V-07 HTR7-VAC14 6 27 chr10:90857133:- chr16:70763025:- INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 TRIOBP-PES1 4 16 chr22:37765817:+ chr22:30592398:- . NA TCGA-N9-A4PZ-01A-22R-A28V-07 ASXL1-CCM2L 4 11 chr20:32369123:+ chr20:32025856:+ FRAMESHIFT Likely Oncogenic NA TCGA-N9-A4PZ-01A-22R-A28V-07 NCOA1-FAM228B 3 15 chr2:24697798:+ chr2:24095141:+ . NA TCGA-N9-A4PZ-01A-22R-A28V-07 GTF2IRD1-POLD2 2 18 chr7:74545809:+ chr7:44122109:- INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 NUCKS1-SDCCAG8 1 18 chr1:205727700:- chr1:243415702:+ INFRAME NA TCGA-N9-A4PZ-01A-22R-A28V-07 ACTR1A-EFCAB13 1 12 chr10:102502600:- chr17:47370437:+ FRAMESHIFT NA TCGA-N9-A4PZ-01A-22R-A28V-07 DNM2-MRPL4 1 12 chr19:10718403:+ chr19:10252146:+ . NA TCGA-N9-A4PZ-01A-22R-A28V-07 RHPN2-MACROD1 2 2 chr19:33026504:- chr11:64152393:- FRAMESHIFT NA TCGA-N9-A4PZ-01A-22R-A28V-07 TMX2-IFT46 1 6 chr11:57712807:+ chr11:118565061:- . NA TCGA-N9-A4PZ-01A-22R-A28V-07 SLC16A7-ATP23 1 5 chr12:59596236:+ chr12:57945628:+ . NA TCGA-N9-A4PZ-01A-22R-A28V-07 SETD2-KIF9 1 4 chr3:47163854:- chr3:47248086:- FRAMESHIFT Likely Oncogenic NA TCGA-N9-A4Q1-01A-11R-A28V-07 VTI1A-HDAC1 7 14 chr10:112538330:+ chr1:32324479:+ INFRAME NA TCGA-N9-A4Q1-01A-11R-A28V-07 AIP-PRSS53 6 9 chr11:67483854:+ chr16:31083808:- . NA TCGA-N9-A4Q1-01A-11R-A28V-07 KDM4B-UVRAG 3 10 chr19:5016339:+ chr11:76140711:+ . NA TCGA-N9-A4Q1-01A-11R-A28V-07 MYO7A-ZNF512 1 10 chr11:77202424:+ chr2:27621153:+ FRAMESHIFT NA TCGA-N9-A4Q1-01A-11R-A28V-07 GPAM-SERHL 1 7 chr10:112181683:- chr22:42501625:+ . NA TCGA-N9-A4Q1-01A-11R-A28V-07 RAB7A-GATS 2 2 chr3:128798069:+ chr7:100233674:- FRAMESHIFT NA TCGA-N9-A4Q3-01A-11R-A28V-07 OLFM2-CRTC1 4 11 chr19:9936304:- chr19:18742910:+ INFRAME NA TCGA-N9-A4Q3-01A-11R-A28V-07 LSM4-RCC1 2 5 chr19:18323018:- chr1:28529858:+ INFRAME NA TCGA-N9-A4Q3-01A-11R-A28V-07 NBAS-PQLC3 2 3 chr2:15186742:- chr2:11160466:+ FRAMESHIFT NA TCGA-N9-A4Q3-01A-11R-A28V-07 ZNF420-SLC37A3 1 2 chr19:37091121:+ chr7:140335504:- INFRAME NA TCGA-N9-A4Q4-01A-11R-A28V-07 CELF1-FNBP4 49 336 chr11:47482695:- chr11:47717512:- FRAMESHIFT NA TCGA-N9-A4Q4-01A-11R-A28V-07 ARFGAP3-LSM10 5 31 chr22:42847514:- chr1:36394153:- . NA TCGA-N9-A4Q4-01A-11R-A28V-07 MCTP2-RIMKLB 3 32 chr15:94402019:+ chr12:8782912:+ . NA TCGA-N9-A4Q4-01A-11R-A28V-07 MACROD1-PPIB 1 6 chr11:64151239:- chr15:64162154:- FRAMESHIFT NA TCGA-N9-A4Q4-01A-11R-A28V-07 INPP5E-EDF1 1 5 chr9:136432956:- chr9:136863871:- FRAMESHIFT NA TCGA-N9-A4Q7-01A-11R-A28V-07 PVT1-CD36 7 31 chr8:127890998:+ chr7:80546191:+ . NA TCGA-N9-A4Q7-01A-11R-A28V-07 SLC25A44-SYT11 1 5 chr1:156194247:+ chr1:155880500:+ . NA TCGA-N9-A4Q8-01A-31R-A28V-07 ZFP3-ARRB2 17 119 chr17:5078575:+ chr17:4717217:+ . NA TCGA-N9-A4Q8-01A-31R-A28V-07 SEPT9-RAB37 6 44 chr17:77402581:+ chr17:74671079:+ . NA TCGA-N9-A4Q8-01A-31R-A28V-07 MECOM-NCEH1 3 26 chr3:169663336:- chr3:172645692:- INFRAME NA TCGA-N9-A4Q8-01A-31R-A28V-07 PIK3R3-LRRC41 2 21 chr1:46077515:- chr1:46286499:- FRAMESHIFT Likely Oncogenic NA TCGA-N9-A4Q8-01A-31R-A28V-07 SERTAD2-BCL2L11 2 10 chr2:64750281:- chr2:111164133:+ . Likely Oncogenic NA TCGA-N9-A4Q8-01A-31R-A28V-07 YWHAE-SMYD4 1 12 chr17:1400047:- chr17:1828006:- . NA TCGA-N9-A4Q8-01A-31R-A28V-07 LDLR-ANGPTL4 1 7 chr19:11089615:+ chr19:8364206:+ . NA TCGA-N9-A4Q8-01A-31R-A28V-07 FAM49B-SH3GL1 1 1 chr8:129903312:- chr19:4364120:- . NA TCGA-NA-A4QV-01A-11R-A28V-07 NUP93-THADA 12 119 chr16:56758655:+ chr2:43232882:- FRAMESHIFT NA TCGA-NA-A4QV-01A-11R-A28V-07 HERPUD1-THADA 10 105 chr16:56936817:+ chr2:43430302:- INFRAME NA TCGA-NA-A4QV-01A-11R-A28V-07 CCDC157-EWSR1 13 82 chr22:30357132:+ chr22:29292137:+ . Likely Oncogenic NA TCGA-NA-A4QV-01A-11R-A28V-07 ZMIZ1-ADK 24 38 chr10:79069270:+ chr10:74708321:+ . NA TCGA-NA-A4QV-01A-11R-A28V-07 TPRN-CTDNEP1 6 99 chr9:137198987:- chr17:7244635:- FRAMESHIFT NA TCGA-NA-A4QV-01A-11R-A28V-07 FBXL3-ZNF76 6 43 chr13:77015409:- chr6:35291278:+ INFRAME NA TCGA-NA-A4QV-01A-11R-A28V-07 DYRK1B-DPF1 1 47 chr19:39834023:- chr19:38222708:- . NA TCGA-NA-A4QV-01A-11R-A28V-07 DIP2C-RTKN2 5 21 chr10:288364:- chr10:62199861:- FRAMESHIFT NA TCGA-NA-A4QV-01A-11R-A28V-07 COL27A1-C9orf43 5 10 chr9:114290917:+ chr9:113419108:+ FRAMESHIFT NA TCGA-NA-A4QV-01A-11R-A28V-07 PIGF-CALM2 3 15 chr2:46612228:- chr2:47172459:- INFRAME NA TCGA-NA-A4QV-01A-11R-A28V-07 SARNP-MMP19 5 6 chr12:55817666:- chr12:55842438:- INFRAME NA TCGA-NA-A4QV-01A-11R-A28V-07 MED20-CCND3 1 18 chr6:41916785:- chr6:41940585:- FRAMESHIFT NA TCGA-NA-A4QV-01A-11R-A28V-07 MAPK10-PTPN13 3 7 chr4:86354530:- chr4:86758260:+ . NA TCGA-NA-A4QV-01A-11R-A28V-07 COL1A2-FSTL1 1 9 chr7:94425663:+ chr3:120416027:- INFRAME NA TCGA-NA-A4QV-01A-11R-A28V-07 PIGF-C2orf61 1 7 chr2:46612228:- chr2:47170764:- FRAMESHIFT NA TCGA-NA-A4QV-01A-11R-A28V-07 ZNF529-RYR1 1000 1000 chr19:36589615:- chr19:38561113:+ . NA TCGA-NA-A4QW-01A-11R-A28V-07 CNOT8-OPRPN 23 116 chr5:154865385:+ chr4:70409380:+ FRAMESHIFT NA TCGA-NA-A4QW-01A-11R-A28V-07 XRN1-GAPLINC 13 91 chr3:142397329:- chr18:3478756:+ . NA TCGA-NA-A4QW-01A-11R-A28V-07 CLCN5-NBDY 3 38 chrX:50042462:+ chrX:56817320:+ . NA TCGA-NA-A4QW-01A-11R-A28V-07 ZFPM2-OXR1 4 19 chr8:105444381:+ chr8:106359476:+ . NA TCGA-NA-A4QW-01A-11R-A28V-07 ADAMTS9-PRICKLE2 1 14 chr3:64631455:- chr3:64099925:- INFRAME NA TCGA-NA-A4QW-01A-11R-A28V-07 SNHG16-ANKDD1A 1 9 chr17:76559043:+ chr15:64926066:+ . NA TCGA-NA-A4QW-01A-11R-A28V-07 DUSP22-TP53TG3 1 6 chr6:311962:+ chr16:32675065:- FRAMESHIFT NA TCGA-NA-A4QX-01A-11R-A28V-07 EGLN2-CYP2G2P 32 189 chr19:40801415:+ chr19:41056866:- . NA TCGA-NA-A4QX-01A-11R-A28V-07 MTOR-MAD2L2 13 75 chr1:11167442:- chr1:11680613:- . NA TCGA-NA-A4QX-01A-11R-A28V-07 ZNF566-ZNF507 11 27 chr19:36472911:- chr19:32360504:+ INFRAME NA TCGA-NA-A4QX-01A-11R-A28V-07 PHC3-NFKBIL1 8 27 chr3:170171373:- chr6:31548163:+ INFRAME NA TCGA-NA-A4QX-01A-11R-A28V-07 EID2-TDRD12 3 7 chr19:39540002:- chr19:32731725:+ INFRAME NA TCGA-NA-A4QY-01A-11R-A28V-07 MPPED1-SCFD2 27 86 chr22:43474961:+ chr4:52874061:- FRAMESHIFT NA TCGA-NA-A4QY-01A-11R-A28V-07 RNF185-NKX1-1 3 24 chr22:31160303:+ chr4:1403815:- . NA TCGA-NA-A4QY-01A-11R-A28V-07 PPP1R13B-ADAM18 3 7 chr14:103847299:- chr8:39606307:+ INFRAME NA TCGA-NA-A4QY-01A-11R-A28V-07 BCR-HIC2 1 2 chr22:23182239:+ chr22:21442759:+ . NA TCGA-NA-A4R0-01A-11R-A28V-07 DVL1-OPTN 9 36 chr1:1348896:- chr10:13112453:+ FRAMESHIFT NA TCGA-NA-A4R0-01A-11R-A28V-07 ABHD14B-POC1A 2 48 chr3:51973965:- chr3:52096712:- . NA TCGA-NA-A4R0-01A-11R-A28V-07 GNB1-CDK11B 8 18 chr1:1890820:- chr1:1657498:- . NA TCGA-NA-A4R0-01A-11R-A28V-07 ATAD3C-HSPA14 3 37 chr1:1459231:+ chr10:14867083:+ FRAMESHIFT NA TCGA-NA-A4R0-01A-11R-A28V-07 PDLIM5-CCSER1 1 11 chr4:94455384:+ chr4:91598572:+ INFRAME NA TCGA-NA-A4R0-01A-11R-A28V-07 SEC23B-DZANK1 2 5 chr20:18543172:+ chr20:18433765:- INFRAME NA TCGA-NA-A4R1-01A-11R-A28V-07 SPTAN1-SGTA 25 174 chr9:128552696:+ chr19:2761522:- . NA TCGA-NA-A4R1-01A-11R-A28V-07 WASF2-FGR 16 149 chr1:27489986:- chr1:27625151:- . NA TCGA-NA-A4R1-01A-11R-A28V-07 ARHGEF11-ETV3L 27 104 chr1:157044299:- chr1:157099556:- . NA TCGA-NA-A4R1-01A-11R-A28V-07 BTBD2-GTSE1 16 73 chr19:1987166:- chr22:46323190:+ FRAMESHIFT NA TCGA-NA-A4R1-01A-11R-A28V-07 PMM1-SHISA8 18 57 chr22:41583959:- chr22:41910147:- FRAMESHIFT NA TCGA-NA-A4R1-01A-11R-A28V-07 RAPGEF1-MED27 5 80 chr9:131596298:- chr9:131884099:- FRAMESHIFT NA TCGA-NA-A4R1-01A-11R-A28V-07 TBC1D22A-AP3D1 4 51 chr22:47037198:+ chr19:2102268:- INFRAME NA TCGA-NA-A4R1-01A-11R-A28V-07 CRTC3-MESP2 2 37 chr15:90638815:+ chr15:89778065:+ INFRAME NA TCGA-NA-A4R1-01A-11R-A28V-07 KIAA1549-C7orf66 5 21 chr7:138861139:- chr7:108884584:- . NA TCGA-NA-A4R1-01A-11R-A28V-07 FAM65A-ZP3 3 26 chr16:67544151:+ chr7:76432984:+ . NA TCGA-NA-A4R1-01A-11R-A28V-07 ZNF813-FPR3 5 4 chr19:53467789:+ chr19:51823739:+ . NA TCGA-NA-A4R1-01A-11R-A28V-07 SUMO2-ACOX1 1 17 chr17:75182814:- chr17:75978693:- FRAMESHIFT NA TCGA-NA-A4R1-01A-11R-A28V-07 KIF1B-HAGH 2 12 chr1:10368538:+ chr16:1823037:- FRAMESHIFT NA TCGA-NA-A4R1-01A-11R-A28V-07 CUX2-IFT81 3 6 chr12:111034240:+ chr12:110127360:+ . NA TCGA-NA-A4R1-01A-11R-A28V-07 STXBP1-RALGPS1 1 10 chr9:127661205:+ chr9:127166069:+ FRAMESHIFT NA TCGA-NA-A4R1-01A-11R-A28V-07 ZDHHC1-KCTD19 2 5 chr16:67416171:- chr16:67303337:- . NA TCGA-NA-A4R1-01A-11R-A28V-07 TMEM185A-CXorf40B 1 4 chrX:149631543:- chrX:149937480:- . NA TCGA-NA-A5I1-01A-21R-A28V-07 CD81-ARMC3 15 108 chr11:2377615:+ chr10:23032861:+ FRAMESHIFT NA TCGA-NA-A5I1-01A-21R-A28V-07 LRP1-SLC39A5 12 90 chr12:57129031:+ chr12:56231204:+ . NA TCGA-NA-A5I1-01A-21R-A28V-07 USP37-NHEJ1 11 78 chr2:218562673:- chr2:219078206:- . NA TCGA-NA-A5I1-01A-21R-A28V-07 CMB9-55F22.1-B4GALNT4 15 45 chr11:780381:+ chr11:379866:+ . NA TCGA-NA-A5I1-01A-21R-A28V-07 NPEPPS-CREB3L1 13 20 chr17:47545993:+ chr11:46320264:+ INFRAME NA TCGA-NA-A5I1-01A-21R-A28V-07 DNMT3B-COMMD7 6 46 chr20:32781414:+ chr20:32728142:- INFRAME NA TCGA-NA-A5I1-01A-21R-A28V-07 SOS2-POLN 4 32 chr14:50231197:- chr4:2174751:- INFRAME NA TCGA-NA-A5I1-01A-21R-A28V-07 RNF213-PPP1R27 5 27 chr17:80340356:+ chr17:81834833:- FRAMESHIFT NA TCGA-NA-A5I1-01A-21R-A28V-07 CTCF-PSKH1 2 26 chr16:67571264:+ chr16:67908680:+ . Likely Oncogenic NA TCGA-NA-A5I1-01A-21R-A28V-07 RNF213-UVSSA 3 2 chr17:80334270:+ chr4:1351715:+ FRAMESHIFT NA TCGA-NA-A5I1-01A-21R-A28V-07 PACS1-PPP2R5B 1 9 chr11:66070842:+ chr11:64925848:+ INFRAME NA TCGA-NA-A5I1-01A-21R-A28V-07 PDCD10-HSF1 2 4 chr3:167734806:- chr8:144313846:+ . NA TCGA-NA-A5I1-01A-21R-A28V-07 AMD1-FIG4 1000 1000 chr6:110875215:+ chr6:109825088:+ INFRAME NA TCGA-NA-A5I1-01A-21R-A28V-07 PRX-IGF2 1000 1000 chr19:40397333:- chr11:2129494:- . NA TCGA-ND-A4W6-01A-11R-A28V-07 C2CD2-SH3BGRL 2 14 chr21:41942147:- chrX:81276984:+ INFRAME NA TCGA-ND-A4W6-01A-11R-A28V-07 HLCS-ATP5O 3 8 chr21:36962036:- chr21:33915977:- . NA TCGA-ND-A4W6-01A-11R-A28V-07 TOM1L2-GALK1 2 12 chr17:17972262:- chr17:75751737:- . NA TCGA-ND-A4W6-01A-11R-A28V-07 ELK1-PCBP3 2 4 chrX:47650423:- chr21:45849961:+ . NA TCGA-ND-A4W6-01A-11R-A28V-07 PARP8-FAM159B 1 5 chr5:50763242:+ chr5:64695507:+ INFRAME NA TCGA-ND-A4WA-01A-12R-A28V-07 NRG1-PMEPA1 6 23 chr8:31640729:+ chr20:57659697:- INFRAME NA TCGA-ND-A4WA-01A-12R-A28V-07 PMS2P1-CLIP2 4 17 chr7:100328836:- chr7:74375887:+ . NA TCGA-ND-A4WC-01A-21R-A28V-07 RPL11-PNRC2 1 1 chr1:23693913:+ chr1:23960929:+ . NA TCGA-ND-A4WF-01A-11R-A28V-07 IGF2BP2-IFITM2 39 163 chr3:185823153:- chr11:308231:+ INFRAME NA TCGA-ND-A4WF-01A-11R-A28V-07 TRA2B-P3H2 10 103 chr3:185937825:- chr3:189964098:- INFRAME NA TCGA-ND-A4WF-01A-11R-A28V-07 EYA2-MYLK2 19 66 chr20:47097168:+ chr20:31830819:+ INFRAME NA TCGA-ND-A4WF-01A-11R-A28V-07 RAB40C-HBZ 10 90 chr16:590433:+ chr16:152893:+ . NA TCGA-ND-A4WF-01A-11R-A28V-07 SPOP-EPHX2 6 25 chr17:49677933:- chr8:27500926:+ . Likely Oncogenic NA TCGA-ND-A4WF-01A-11R-A28V-07 TRABD2B-PSMD13 6 22 chr1:47994034:- chr11:244041:+ INFRAME NA TCGA-ND-A4WF-01A-11R-A28V-07 RAB40C-HBM 1 36 chr16:590433:+ chr16:164482:+ . NA TCGA-ND-A4WF-01A-11R-A28V-07 CTNNB1-IGF2BP2 3 23 chr3:41199670:+ chr3:185698347:- . NA TCGA-ND-A4WF-01A-11R-A28V-07 RASSF8-ST8SIA1 3 13 chr12:25959148:+ chr12:22202038:- . NA TCGA-ND-A4WF-01A-11R-A28V-07 ELAVL1-ATXN10 2 8 chr19:7973725:- chr22:45842991:+ INFRAME NA TCGA-ND-A4WF-01A-11R-A28V-07 ADCK5-CPSF1 2 7 chr8:144383230:+ chr8:144394160:- FRAMESHIFT NA TCGA-ND-A4WF-01A-11R-A28V-07 FOXM1-ANO2 2 7 chr12:2864320:- chr12:5532114:- . NA TCGA-ND-A4WF-01A-11R-A28V-07 NEDD9-SCT 1 9 chr6:11382139:- chr11:626989:- . NA TCGA-ND-A4WF-01A-11R-A28V-07 IGF2BP2-IFITM1 1 5 chr3:185823153:- chr11:314164:+ . NA TCGA-NF-A4WU-01A-11R-A28V-07 INPP5A-LRRC27 2 12 chr10:132538171:+ chr10:132347984:+ FRAMESHIFT NA TCGA-NF-A4WU-01A-11R-A28V-07 WNK2-CENPP 1 13 chr9:93308584:+ chr9:92611314:+ INFRAME NA TCGA-NF-A4WU-01A-11R-A28V-07 SP1-WNT9B 1 4 chr12:53383622:+ chr17:46872517:+ FRAMESHIFT NA TCGA-NF-A4WX-01A-11R-A28V-07 NIPBL-SPEF2 32 179 chr5:36877178:+ chr5:35799968:+ . NA TCGA-NF-A4WX-01A-11R-A28V-07 SLC27A1-KIAA0391 8 46 chr19:17489117:+ chr14:35266727:+ INFRAME NA TCGA-NF-A4WX-01A-11R-A28V-07 GPR137-RARRES3 6 44 chr11:64289142:+ chr11:63546149:+ INFRAME NA TCGA-NF-A4WX-01A-11R-A28V-07 TMEM131-PLA2G6 7 32 chr2:97792386:- chr22:38135084:- FRAMESHIFT NA TCGA-NF-A4WX-01A-11R-A28V-07 SF3A3-HPCAL4 7 30 chr1:37960120:- chr1:39684611:- . NA TCGA-NF-A4WX-01A-11R-A28V-07 KCNQ1-LSP1 6 19 chr11:2445484:+ chr11:1880087:+ INFRAME NA TCGA-NF-A4WX-01A-11R-A28V-07 EIF2S2P4-PIGU 4 22 chr2:170752469:+ chr20:34588607:- . NA TCGA-NF-A4WX-01A-11R-A28V-07 CHEK2-THOC5 6 8 chr22:28689135:- chr22:29536738:- FRAMESHIFT NA TCGA-NF-A4WX-01A-11R-A28V-07 KCNQ1-MIR7847 6 7 chr11:2445484:+ chr11:1880087:+ . NA TCGA-NF-A4WX-01A-11R-A28V-07 SPTLC1-IARS 2 10 chr9:92067966:- chr9:92245071:- FRAMESHIFT NA TCGA-NF-A4X2-01A-11R-A28V-07 CELF1-RAPSN 1 28 chr11:47552992:- chr11:47442814:- . NA TCGA-NF-A5CP-01A-12R-A28V-07 UBE2G1-PPIL2 9 52 chr17:4366271:- chr22:21669913:+ FRAMESHIFT NA TCGA-NF-A5CP-01A-12R-A28V-07 UBE2G1-MIR130B 9 9 chr17:4366271:- chr22:21669913:+ . NA TCGA-NF-A5CP-01A-12R-A28V-07 ZNF423-NCEH1 6 13 chr16:49789487:- chr3:172634092:- FRAMESHIFT NA TCGA-NF-A5CP-01A-12R-A28V-07 EP400-TRIM29 4 16 chr12:132077574:+ chr11:120118321:- FRAMESHIFT NA TCGA-NF-A5CP-01A-12R-A28V-07 POM121C-HIP1 2 9 chr7:75437515:- chr7:75599247:- INFRAME NA TCGA-NF-A5CP-01A-12R-A28V-07 ANK3-MCU 1 8 chr10:60615186:- chr10:72834359:+ INFRAME NA TCGA-NF-A5CP-01A-12R-A28V-07 ZNF423-TNFSF10 1 7 chr16:49855735:- chr3:172514998:- . NA TCGA-NG-A4VU-01A-11R-A28V-07 CD44-CAPRIN1 46 290 chr11:35139370:+ chr11:34089395:+ INFRAME NA TCGA-NG-A4VU-01A-11R-A28V-07 PON2-TYW1B 2 65 chr7:95424515:- chr7:72575719:- FRAMESHIFT NA TCGA-NG-A4VU-01A-11R-A28V-07 INTS11-CCNL2 1 18 chr1:1314824:- chr1:1393460:- INFRAME NA TCGA-NG-A4VU-01A-11R-A28V-07 FRAS1-ART3 2 13 chr4:78066016:+ chr4:76112386:+ FRAMESHIFT NA TCGA-NG-A4VU-01A-11R-A28V-07 GARNL3-RALGPS1 1 9 chr9:127291242:+ chr9:127174715:+ INFRAME NA TCGA-V4-A9EA-01A-11R-A405-07 TBCD-CSNK1D 2 1 chr17:82752377:+ chr17:82265796:- INFRAME NA TCGA-V4-A9EK-01A-11R-A405-07 PARD3B-SLC40A1 1 4 chr2:204546171:+ chr2:189583420:- . NA TCGA-V4-A9EX-01A-11R-A405-07 RFC1-SMIM14 3 22 chr4:39366239:- chr4:39572463:- INFRAME NA TCGA-V4-A9F7-01A-11R-A405-07 OCIAD1-KIT 17 51 chr4:48857365:+ chr4:54723584:+ INFRAME NA TCGA-V4-A9F7-01A-11R-A405-07 CAPN3-SSU72 2 1 chr15:42409995:+ chr1:1545002:- FRAMESHIFT NA TCGA-VD-A8KE-01A-11R-A405-07 GUCD1-MB 1 7 chr22:24554949:- chr22:35607443:- FRAMESHIFT NA TCGA-VD-A8KJ-01A-11R-A405-07 SFT2D1-FAM46A 275 670 chr6:166342419:- chr6:81495113:- INFRAME NA TCGA-VD-A8KJ-01A-11R-A405-07 STX7-LMBRD1 147 1079 chr6:132503446:- chr6:69676541:- INFRAME NA TCGA-VD-A8KJ-01A-11R-A405-07 TMEM200A-FYN 17 45 chr6:130366524:+ chr6:111780635:- . NA TCGA-VD-A8KJ-01A-11R-A405-07 PHF3-QKI 9 25 chr6:63636150:+ chr6:163561982:+ . NA TCGA-VD-A8KJ-01A-11R-A405-07 WTAP-MAS1 10 20 chr6:159727333:+ chr6:159906920:+ . NA TCGA-VD-A8KJ-01A-11R-A405-07 FYN-CDK19 10 16 chr6:111780566:- chr6:110614666:- . NA TCGA-VD-A8KJ-01A-11R-A405-07 SLC18B1-TRMT11 5 26 chr6:132796982:- chr6:126021160:+ FRAMESHIFT NA TCGA-VD-A8KJ-01A-11R-A405-07 MAP3K5-OSTM1 6 16 chr6:136791710:- chr6:108064299:- FRAMESHIFT NA TCGA-VD-A8KJ-01A-11R-A405-07 SAMD3-GRIK2 2 8 chr6:130365120:- chr6:102035341:+ . NA TCGA-VD-A8KJ-01A-11R-A405-07 RNGTT-TBC1D32 2 4 chr6:88678353:- chr6:121321794:- FRAMESHIFT NA TCGA-VD-A8KM-01A-11R-A405-07 KIF13B-FUT10 2 14 chr8:29245346:- chr8:33372804:- FRAMESHIFT NA TCGA-VD-A8KM-01A-11R-A405-07 TMEM259-PRSS57 1 1 chr19:1020772:- chr19:694970:- FRAMESHIFT NA TCGA-VD-A8KO-01A-11R-A405-07 MACROD1-PARP1 4 4 chr11:64151239:- chr1:226402379:- FRAMESHIFT NA TCGA-VD-AA8M-01A-11R-A405-07 ZNF266-MATK 6 36 chr19:9434798:- chr19:3784033:- . NA TCGA-VD-AA8M-01A-11R-A405-07 ZNF440-ECSIT 2 3 chr19:11814450:+ chr19:11508048:- INFRAME NA TCGA-VD-AA8S-01B-11R-A405-07 NXF1-C11orf98 5 10 chr11:62805329:- chr11:62663333:- FRAMESHIFT NA TCGA-VD-AA8S-01B-11R-A405-07 NXF1-LBHD1 5 10 chr11:62805329:- chr11:62663333:- FRAMESHIFT NA TCGA-WC-A884-01A-11R-A405-07 SEPT9-BCAS3 41 216 chr17:77402703:+ chr17:61368327:+ INFRAME NA TCGA-WC-A884-01A-11R-A405-07 TNRC6C-RPTOR 1 17 chr17:78005079:+ chr17:80730560:+ FRAMESHIFT NA TCGA-WC-A885-01A-11R-A405-07 HNRNPUL2-EML3 3 36 chr11:62716989:- chr11:62611596:- INFRAME NA TCGA-YZ-A983-01A-11R-A405-07 FAM193A-NMU 4 13 chr4:2663288:+ chr4:55630460:- FRAMESHIFT NA TCGA-OR-A5J1-01A-11R-A29S-07 KCTD5-TSC2 24 59 chr16:2697997:+ chr16:2086193:+ INFRAME Likely Oncogenic Everolimus NA LEVEL_2B TCGA-4Z-AA86-01A-11R-A39I-07 PRKCA-NF1 2 7 chr17:66306127:+ chr17:31325820:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-CF-A3MF-01A-12R-A21D-07 FGFR3-TACC3 273 898 chr4:1807198:+ chr4:1739644:+ . Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-CF-A3MG-01A-11R-A20F-07 FGFR3-TACC3 935 1742 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-CF-A3MH-01A-11R-A20F-07 FGFR3-TACC3 1677 3524 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-CF-A47S-01A-11R-A23W-07 FGFR3-TACC3 2589 8282 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-CF-A8HY-01A-11R-A36F-07 FGFR3-TACC3 316 827 chr4:1806934:+ chr4:1735731:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-DK-AA6X-01A-12R-A42T-07 NF1-SPACA3 13 21 chr17:31169997:+ chr17:32996843:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-E7-A5KE-01A-11R-A28M-07 FGFR3-TACC3 932 2895 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-FD-A6TI-01A-11R-A32O-07 TPM3-NTRK1 1 1 chr1:154170400:- chr1:156874571:+ INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-GU-A764-01A-11R-A352-07 ZBTB7B-NTRK1 3 2 chr1:155002943:+ chr1:156837726:+ . Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-GV-A3QG-01A-11R-A220-07 TPM1-ALK 121 382 chr15:63062645:+ chr2:29223528:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-XF-AAMX-01A-11R-A42T-07 FGFR3-TACC3 26 956 chr4:1794043:+ chr4:1744518:+ FRAMESHIFT Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-XF-AAMZ-01A-11R-A42T-07 FGFR3-TACC3 266 654 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3A TCGA-ZF-A9R3-01A-11R-A38B-07 KIF1B-NF1 3 16 chr1:10343287:+ chr17:31356460:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-ZF-A9RE-01A-11R-A38B-07 PTEN-LIPF 1000 1000 chr10:87864624:+ chr10:88667569:+ . Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-A1-A0SP-01A-11R-A084-07 PTEN-WNK1 8 4 chr10:87925557:+ chr12:813642:+ FRAMESHIFT Likely Oncogenic AZD6482+Alpelisib,AZD8186,GSK2636771 NA LEVEL_4 TCGA-A2-A0ET-01A-31R-A034-07 BRCA2-RXFP2 1 3 chr13:32371100:+ chr13:31758258:+ INFRAME Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-A2-A1FW-01A-11R-A13Q-07 BRCA2-N4BP2L1 1 9 chr13:32380145:+ chr13:32420576:- FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-A2-A3KD-01A-12R-A213-07 ESR1-ASPH 146 727 chr6:151880771:+ chr8:61503509:- FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-A7-A0D9-01A-31R-A056-07 ESR1-GNAS 2 4 chr6:151842787:+ chr20:58895612:+ INFRAME Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-A8-A08I-01A-11R-A00Z-07 AKAP7-ESR1 10 72 chr6:131145416:+ chr6:152094385:+ INFRAME Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-A8-A09C-01A-11R-A00Z-07 NF1-SUZ12 1 12 chr17:31206371:+ chr17:31966147:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-A8-A09I-01A-22R-A034-07 NF1-NLE1 6 15 chr17:31169997:+ chr17:35137193:- FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-AC-A2BM-01A-11R-A21T-07 EHMT1-TSC1 1 2 chr9:137818138:+ chr9:132928952:- . Likely Oncogenic Everolimus NA LEVEL_2B TCGA-AN-A0AL-01A-11R-A00Z-07 FGFR2-CASP7 1 11 chr10:121483698:- chr10:113697494:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-AO-A03U-01B-21R-A10J-07 ETV6-NTRK3 32 72 chr12:11869969:+ chr15:87940753:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-AO-A03V-01A-11R-A115-07 FGFR2-CTNNA3 3 3 chr10:121503790:- chr10:66621784:- FRAMESHIFT Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-AR-A0U3-01A-11R-A109-07 MGP-ESR1 1 4 chr12:14884213:- chr6:151944173:+ INFRAME Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-AR-A252-01A-11R-A169-07 NF1-CLTC 3 30 chr17:31236021:+ chr17:59644276:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-AR-A256-01A-11R-A169-07 TSC2-TMEM204 4 22 chr16:2048753:+ chr16:1554782:+ FRAMESHIFT Likely Oncogenic Everolimus NA LEVEL_2B TCGA-BH-A18R-01A-11R-A12D-07 NF1-CDK5RAP3 3 21 chr17:31265339:+ chr17:47981163:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-BH-A1EV-01A-11R-A137-07 ESR1-BNC2 3 12 chr6:151842787:+ chr9:16738485:- FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-BH-A1FD-01A-11R-A13Q-07 ESR1-POLH 4 20 chr6:152011794:+ chr6:43582316:+ . Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-C8-A1HJ-01A-11R-A13Q-07 ERC1-RET 8 18 chr12:1141787:+ chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-C8-A1HO-01A-11R-A13Q-07 NF1-CACNA1G 2 8 chr17:31265339:+ chr17:50599428:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-D8-A13Z-01A-11R-A115-07 FGFR2-CCDC6 9 36 chr10:121483698:- chr10:59852702:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-E2-A1IG-01A-11R-A144-07 NF1-RAB11FIP4 1 2 chr17:31265339:+ chr17:31517651:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-E2-A1LL-01A-11R-A144-07 NF1-RAB11FIP4 4 5 chr17:31095369:+ chr17:31431813:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-E9-A1NA-01A-11R-A144-07 ESR1-MYCT1 1 4 chr6:151944508:+ chr6:152721742:+ INFRAME Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3A TCGA-LD-A7W5-01A-22R-A352-07 FGFR2-ENPP2 36 116 chr10:121515123:- chr8:119638527:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-DS-A3LQ-01A-21R-A21T-07 FGFR3-TACC3 5 47 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-HM-A3JK-01A-11R-A32Y-07 FAT1-NTRK3 1 6 chr4:186706563:- chr15:88137561:- FRAMESHIFT Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-Q1-A73R-01A-11R-A33Z-07 FGFR3-TACC3 6 16 chr4:1807220:+ chr4:1740894:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-VS-A9UD-01A-11R-A42T-07 FGFR3-TACC3 103 210 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-WL-A834-01A-11R-A352-07 FGFR3-TACC3 1049 2300 chr4:1806934:+ chr4:1735731:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-WL-A834-01A-11R-A352-07 TACC3-FGFR3 1000 1000 chr4:1735832:+ chr4:1801365:+ . Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-ZJ-AAXT-01A-11R-A42T-07 FGFR3-TACC3 1515 3239 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-W5-AA2Q-01A-11R-A41I-07 FGFR2-SHTN1 68 997 chr10:121483698:- chr10:116948997:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3A TCGA-W5-AA2W-01A-11R-A41I-07 FGFR2-BICC1 249 602 chr10:121483698:- chr10:58806584:+ INFRAME Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3A TCGA-W5-AA2Z-01A-11R-A41I-07 FGFR2-CCDC186 25 136 chr10:121483698:- chr10:114151220:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3A TCGA-W5-AA2Z-01A-11R-A41I-07 DNM1-FGFR2 4 11 chr9:128191780:+ chr10:121480021:- . Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3A TCGA-W5-AA31-01A-11R-A41I-07 NF1-MAP2K4 16 23 chr17:31182665:+ chr17:12125294:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-W5-AA31-01A-11R-A41I-07 MYO18A-NF1 6 28 chr17:29165942:- chr17:31155983:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-ZH-A8Y1-01A-11R-A41I-07 FGFR2-FRK 2 13 chr10:121503790:- chr6:116003998:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3A TCGA-ZH-A8Y5-01A-11R-A41I-07 FGFR2-BICC1 96 248 chr10:121483698:- chr10:58702074:+ INFRAME Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3A TCGA-A6-6652-01A-11R-1774-07 BRCA1-FAM134C 2 3 chr17:43047643:- chr17:42587864:- INFRAME Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-AZ-6600-01A-11R-1774-07 NF1-POLDIP2 2 3 chr17:31265339:+ chr17:28355876:- INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-CK-5913-01A-11R-1653-07 ETV6-NTRK3 14 41 chr12:11869969:+ chr15:87940753:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-CK-5916-01A-11R-1653-07 ETV6-NTRK3 5 15 chr12:11869969:+ chr15:87940753:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-CM-4743-01A-01R-1723-07 CCDC6-RET 5 20 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-JY-A6FE-01A-11R-A336-31 PDGFRA-FIP1L1 2 0 chr4:54230606:+ chr4:53452920:+ . Oncogenic Imatinib NA LEVEL_2B TCGA-LN-A5U5-01A-21R-A28J-31 FGFR3-TACC3 16 8 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-LN-A9FO-01A-11R-A38D-31 FGFR3-TACC3 444 81 chr4:1806934:+ chr4:1735731:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-06-2559-01A-01R-1849-01 TMEM165-PDGFRA 19 27 chr4:55396396:+ chr4:54267289:+ INFRAME Likely Oncogenic Imatinib NA LEVEL_2B TCGA-06-5418-01A-01R-1849-01 CEP85L-ROS1 7 9 chr6:118481779:- chr6:117320030:- INFRAME Likely Oncogenic Crizotinib NA LEVEL_2B TCGA-14-0789-01A-01R-1849-01 NF1-RAB11FIP4 3 1 chr17:31265339:+ chr17:31517651:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-14-0817-01A-01R-1849-01 DANCR-PDGFRA 2 5 chr4:52714238:+ chr4:54277388:+ . Likely Oncogenic Imatinib NA LEVEL_2B TCGA-27-1835-01A-01R-1850-01 FGFR3-TACC3 10233 6034 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-27-1835-01A-01R-1850-01 TACC3-FGFR3 1000 1000 chr4:1739767:+ chr4:1806902:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-28-5216-01A-01R-1850-01 PDGFRA-GRID2 4 0 chr4:54229415:+ chr4:92590131:+ . Likely Oncogenic Imatinib NA LEVEL_2B TCGA-28-5218-01A-01R-1850-01 KLHL7-BRAF 7 3 chr7:23125799:+ chr7:140783157:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-BB-4223-01A-01R-1436-07 PAN3-NTRK2 7 5 chr13:28139087:+ chr9:84934162:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-BB-4224-01A-01R-1436-07 NOTCH1-SDCCAG3 10 37 chr9:136544024:- chr9:136407938:- FRAMESHIFT Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-CN-6997-01A-11R-2016-07 LYN-NTRK3 24 146 chr8:55953984:+ chr15:88033045:- INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-CN-A498-01A-11R-A24H-07 NOTCH1-MAPK1 3 12 chr9:136511152:- chr22:21788808:- FRAMESHIFT Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-CN-A498-01A-11R-A24H-07 MAPK1-NOTCH1 1 7 chr22:21799012:- chr9:136519565:- FRAMESHIFT Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-CR-6473-01A-11R-1873-07 FGFR3-TACC3 268 1764 chr4:1806934:+ chr4:1737598:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-CR-6487-01A-11R-1873-07 TSC1-DOLPP1 16 62 chr9:132921363:- chr9:129086709:+ INFRAME Likely Oncogenic Everolimus NA LEVEL_2B TCGA-CV-7100-01A-11R-2016-07 FGFR3-TACC3 567 2161 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-KM-8443-01A-11R-2315-07 FOXO1-PDGFRB 2 4 chr13:40665583:- chr5:150120123:- INFRAME Likely Oncogenic Imatinib Ponatinib,Imatinib,Nilotinib NA LEVEL_2B TCGA-2Z-A9JJ-01A-11R-A42S-07 EML4-ALK 9 37 chr2:42245687:+ chr2:29223528:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-5P-A9JZ-01A-11R-A42S-07 BRAF-CUL1 4 9 chr7:140850111:- chr7:148729962:+ . Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-DW-7839-01A-11R-2139-07 FGFR3-TACC3 2 4 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-G7-6792-01A-21R-1965-07 STRN-ALK 32 81 chr2:36916078:- chr2:29223528:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-AB-2817-03A-01T-0736-13 BCR-ABL1 14 56 chr22:23182239:+ chr9:130854064:+ INFRAME Oncogenic Imatinib,Nilotinib,Dasatinib NA LEVEL_2B TCGA-AB-2901-03A-01T-0735-13 BCR-ABL1 3 43 chr22:23290413:+ chr9:130854064:+ INFRAME Oncogenic Imatinib,Nilotinib,Dasatinib NA LEVEL_2B TCGA-AB-2920-03B-01T-0760-13 FGFR3-TACC3 1 0 chr4:1806071:+ chr4:1728244:+ FRAMESHIFT Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-AB-2941-03A-01T-0740-13 BCR-ABL1 4 69 chr22:23290413:+ chr9:130854064:+ INFRAME Oncogenic Imatinib,Nilotinib,Dasatinib NA LEVEL_2B TCGA-AB-2944-03A-01T-0740-13 BCR-ABL1 2 5 chr22:23182239:+ chr9:130854064:+ INFRAME Oncogenic Imatinib,Nilotinib,Dasatinib NA LEVEL_2B TCGA-AB-2952-03B-01T-0760-13 NF1-LRRC37B 1 8 chr17:31095369:+ chr17:32045700:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-AB-2971-03A-01T-0734-13 FKBP15-RET 1 0 chr9:113174562:- chr10:43112136:+ FRAMESHIFT Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CS-6186-01A-12R-2027-07 FGFR3-ELAVL3 53 379 chr4:1806934:+ chr19:11466827:- INFRAME Likely Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-CS-6665-01A-11R-1896-07 USP46-PDGFRA 156 720 chr4:52659115:- chr4:54274531:+ FRAMESHIFT Likely Oncogenic Imatinib NA LEVEL_2B TCGA-CS-6665-01A-11R-1896-07 TMEM165-PDGFRA 5 15 chr4:55396396:+ chr4:54267289:+ INFRAME Likely Oncogenic Imatinib NA LEVEL_2B TCGA-DB-5277-01A-01R-1470-07 AKAP13-NTRK3 1 5 chr15:85684873:+ chr15:88033045:- INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DU-A76L-01A-11R-A32Q-07 SQSTM1-NTRK2 13 27 chr5:179825226:+ chr9:84934162:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-E1-A7YD-01A-11R-A34F-07 PAICS-PDGFRA 1 4 chr4:56436328:+ chr4:54270633:+ FRAMESHIFT Likely Oncogenic Imatinib NA LEVEL_2B TCGA-E1-A7YI-01A-11R-A34F-07 PDGFRA-FIP1L1 2265 8541 chr4:54290554:+ chr4:53444048:+ INFRAME Oncogenic Imatinib NA LEVEL_2B TCGA-E1-A7YM-01A-11R-A34F-07 PDGFRA-FIP1L1 1 5 chr4:54290554:+ chr4:53444048:+ INFRAME Oncogenic Imatinib NA LEVEL_2B TCGA-FG-6692-01A-11R-1896-07 NTRK3-LOXL2 2 1 chr15:88255906:- chr8:23333623:- INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-FG-7643-01A-11R-2090-07 FGFR3-TACC3 1756 5685 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-FG-A70Z-01A-12R-A33Z-07 PTEN-ATAD1 2 9 chr10:87894109:+ chr10:87790430:- FRAMESHIFT Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-FG-A87N-01A-11R-A36H-07 PTEN-PYGB 6 18 chr10:87933251:+ chr20:25269129:+ INFRAME Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-HT-7680-01A-11R-2256-07 AFAP1-NTRK2 24 147 chr4:7778762:- chr9:84741892:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-HT-7680-01A-11R-2256-07 NTRK2-AFAP1 8 16 chr9:84727959:+ chr4:7774903:- INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-HT-A5R7-01A-11R-A28M-07 KIAA1211-PDGFRA 2 5 chr4:56049299:+ chr4:54273537:+ . Likely Oncogenic Imatinib NA LEVEL_2B TCGA-HT-A617-01A-11R-A29R-07 NF1-RHOT1 1 10 chr17:31249119:+ chr17:32192201:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-P5-A72U-01A-31R-A32Q-07 FGFR3-TACC3 358 1324 chr4:1806934:+ chr4:1731172:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-P5-A72U-01A-31R-A32Q-07 TACC3-FGFR3 1000 1000 chr4:1735308:+ chr4:1806858:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-TM-A7CF-01A-11R-A32Q-07 NTRK3-PEAK1 1 3 chr15:88183418:- chr15:77115319:- FRAMESHIFT Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-TM-A7CF-01A-11R-A32Q-07 PKHD1-ESR1 1 2 chr6:51847775:- chr6:151880655:+ INFRAME Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-TM-A84B-01A-11R-A36H-07 FGFR3-FBXO28 330 1829 chr4:1806934:+ chr1:224153142:+ INFRAME Likely Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-TM-A84J-01A-11R-A36H-07 EPHB2-NTRK1 27 167 chr1:22785076:+ chr1:156873633:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-CC-5263-01A-01R-A131-07 BRCA1-BECN1 5 11 chr17:43057052:- chr17:42816054:- FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-CC-A3M9-01A-11R-A213-07 FGFR3-TACC3 1 1 chr4:1799812:+ chr4:1744518:+ FRAMESHIFT Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-DD-A1EK-01A-11R-A213-07 FGFR3-TACC3 946 2367 chr4:1799812:+ chr4:1744518:+ FRAMESHIFT Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-DD-AA3A-01A-11R-A37K-07 FGFR2-SMN1 53 99 chr10:121483698:- chr5:70938839:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-DD-AA3A-01A-11R-A37K-07 SMN1-FGFR2 2 11 chr5:70925184:+ chr10:121480113:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-ED-A7PX-01A-51R-A352-07 FGFR2-BICC1 62 109 chr10:121483698:- chr10:58702074:+ INFRAME Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-GJ-A6C0-01A-12R-A311-07 RAB11FIP4-NF1 7 3 chr17:31488272:+ chr17:31374013:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-GJ-A9DB-01A-11R-A37K-07 TSC1-SARDH 1 5 chr9:132921363:- chr9:133713124:- FRAMESHIFT Likely Oncogenic Everolimus NA LEVEL_2B TCGA-XR-A8TG-01A-11R-A36F-07 NF1-RAB11FIP4 1 3 chr17:31265339:+ chr17:31517651:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-05-4426-01A-01R-1206-07 SLC34A2-ROS1 148 1146 chr4:25676702:+ chr6:117324415:- INFRAME Oncogenic Crizotinib NA LEVEL_1 TCGA-44-2665-01A-01R-0946-07 ROS1-CLTC 11 111 chr6:117288686:- chr17:59693728:+ INFRAME Likely Oncogenic Crizotinib NA LEVEL_1 TCGA-44-2665-01A-01R-0946-07 CLTC-ROS1 11 109 chr17:59690711:+ chr6:117321394:- INFRAME Likely Oncogenic Crizotinib NA LEVEL_1 TCGA-44-5644-01A-21R-2039-07 NF1-PSMD11 12 14 chr17:31169997:+ chr17:32446945:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-50-8460-01A-11R-2326-07 EML4-ALK 5 16 chr2:42264951:+ chr2:29223528:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_1 TCGA-55-6543-01A-11R-1755-07 TRIM33-RET 4 25 chr1:114421436:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2A TCGA-55-6986-01A-11R-1949-07 EZR-ROS1 58 249 chr6:158770764:- chr6:117324415:- INFRAME Oncogenic Crizotinib NA LEVEL_1 TCGA-55-8091-01A-11R-2241-07 TRIM24-NTRK2 2 18 chr7:138573642:+ chr9:84867243:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-62-A46Y-01A-11R-A24H-07 SLC34A2-ROS1 108 1064 chr4:25676702:+ chr6:117329446:- INFRAME Oncogenic Crizotinib NA LEVEL_1 TCGA-64-1680-01A-02R-0946-07 CD74-ROS1 68 224 chr5:150404680:- chr6:117324415:- INFRAME Oncogenic Crizotinib NA LEVEL_1 TCGA-64-1680-01A-02R-0946-07 ROS1-FBXO9 1 6 chr6:117403139:- chr6:53097722:+ FRAMESHIFT Likely Oncogenic Crizotinib NA LEVEL_1 TCGA-67-3774-01A-01R-0946-07 NOTCH1-TMEM117 1000 1000 chr9:136513021:- chr12:43944210:+ INFRAME Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-67-6215-01A-11R-1755-07 EML4-ALK 28 55 chr2:42264731:+ chr2:29223528:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_1 TCGA-67-6216-01A-11R-1755-07 EML4-ALK 5 13 chr2:42264951:+ chr2:29223528:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_1 TCGA-69-7764-01A-11R-2170-07 NLK-NF1 8 22 chr17:28043331:+ chr17:31360487:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-69-7979-01A-11R-2187-07 CLOCK-PDGFRA 2 6 chr4:55509912:- chr4:54287430:+ . Likely Oncogenic Imatinib NA LEVEL_2B TCGA-69-A59K-01A-11R-A262-07 ZNF675-BRCA1 1 12 chr19:23687031:- chr17:43115779:- FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-75-6203-01A-11R-1755-07 CCDC6-RET 6 17 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2A TCGA-78-7163-01A-12R-2066-07 EML4-ALK 27 64 chr2:42295516:+ chr2:29223528:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_1 TCGA-86-8278-01A-11R-2287-07 CD74-ROS1 92 283 chr5:150404680:- chr6:117324415:- INFRAME Oncogenic Crizotinib NA LEVEL_1 TCGA-86-8278-01A-11R-2287-07 ROS1-CD74 71 341 chr6:117379059:- chr5:150402625:- FRAMESHIFT Oncogenic Crizotinib NA LEVEL_1 TCGA-86-A4P8-01A-11R-A24X-07 EML4-ALK 2 4 chr2:42325554:+ chr2:29223528:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_1 TCGA-NJ-A7XG-01A-12R-A39D-07 EZR-ROS1 58 242 chr6:158770764:- chr6:117324415:- INFRAME Oncogenic Crizotinib NA LEVEL_1 TCGA-21-1075-01A-01R-0692-07 FGFR2-EIF4A2 2 1 chr10:121483698:- chr3:186787127:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-22-4607-01A-01R-1201-07 FGFR3-TACC3 14 282 chr4:1806934:+ chr4:1735273:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-22-5482-01A-01R-1635-07 NF1-SLC46A1 3 16 chr17:31182665:+ chr17:28405997:- INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-34-2608-01A-02R-0851-07 FGFR3-TACC3 11 25 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-34-A5IX-01A-12R-A27Q-07 PTEN-KIF20B 3 6 chr10:87894109:+ chr10:89737387:+ FRAMESHIFT Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-39-5024-01A-21R-1820-07 FGFR3-TACC3 357 1692 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-60-2704-01A-11R-2045-07 CPD-NF1 1 3 chr17:30439077:+ chr17:31349120:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-63-7022-01A-11R-1949-07 FGFR3-TACC3 1 2 chr4:1806934:+ chr4:1744518:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-66-2765-01A-01R-0851-07 CCAR2-FGFR2 12 28 chr8:22604842:+ chr10:121480021:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-66-2765-01A-01R-0851-07 FGFR2-CCAR2 2 49 chr10:121483698:- chr8:22606607:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-66-2786-01A-01R-0851-07 FGFR3-TACC3 2351 6102 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-66-2786-01A-01R-0851-07 TACC3-FGFR3 1000 1000 chr4:1739728:+ chr4:1806646:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-66-2788-01A-01R-0980-07 TULP4-ESR1 9 14 chr6:158314268:+ chr6:151880655:+ FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-66-2788-01A-01R-0980-07 ESR1-TFB1M 5 14 chr6:151944508:+ chr6:155260400:- FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-68-8251-01A-11R-2296-07 NF1-RHOT1 1 2 chr17:31095369:+ chr17:32171043:+ FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-77-7142-01A-11R-2045-07 NF1-RNF135 24 26 chr17:31095369:+ chr17:30997242:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-77-8130-01A-11R-2247-07 NOTCH1-CHST9 2 2 chr9:136506527:- chr18:26944366:- FRAMESHIFT Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-92-8063-01A-11R-2247-07 NF1-AGTR1 6 9 chr17:31335031:+ chr3:148707944:+ . Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-92-8065-01A-11R-2247-07 FGFR3-TACC3 10 44 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-LA-A7SW-01A-11R-A405-07 TSC2-MAPK8IP3 7 9 chr16:2086871:+ chr16:1759958:+ FRAMESHIFT Likely Oncogenic Everolimus NA LEVEL_2B TCGA-UD-AAC4-01A-11R-A40A-07 OSCP1-NF1 9 36 chr1:36450258:- chr17:31374013:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-23-1123-01A-01R-1565-13 NOTCH1-SPTAN1 11 2 chr9:136496230:- chr9:128624328:+ INFRAME Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-24-1424-01A-01R-1565-13 FGFR2-USP10 249 86 chr10:121593709:- chr16:84758716:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-24-1474-01A-01R-1566-13 FGFR3-MLLT10 15 6 chr4:1805904:+ chr10:21740030:+ INFRAME Likely Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-24-2298-01A-01R-1569-13 CCDC6-RET 2 0 chr10:59906122:- chr10:43100459:+ FRAMESHIFT Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-61-1738-01A-01R-1567-13 NF1-RBX1 94 17 chr17:31095369:+ chr22:40953555:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-3A-A9J0-01A-11R-A41B-07 NF1-IKZF3 3 19 chr17:31236021:+ chr17:39832151:- FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-F2-A44H-01A-11R-A26U-07 CUX1-BRAF 2 4 chr7:102115273:+ chr7:140794467:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-2A-A8W1-01A-11R-A37L-07 NF1-BRCA1 1 6 chr17:31326252:+ chr17:43063951:- FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-2A-A8W1-01A-11R-A37L-07 NF1-EPHA1 1 6 chr17:31337880:+ chr7:143391775:- INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-2A-A8W1-01A-11R-A37L-07 BRCA1-NF1 1 5 chr17:43047643:- chr17:31327499:+ FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-CH-5737-01A-11R-1580-07 KDM7A-BRAF 1 11 chr7:140111095:- chr7:140781693:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-CH-5766-01A-11R-1580-07 PTEN-RALGAPA2 2 22 chr10:87894109:+ chr20:20643549:- FRAMESHIFT Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-EJ-5503-01A-01R-1580-07 TSC1-CEL 5 14 chr9:132921363:- chr9:133070461:+ INFRAME Likely Oncogenic Everolimus NA LEVEL_2B TCGA-EJ-5510-01A-01R-1580-07 ARHGEF7-PTEN 1 11 chr13:111244294:+ chr10:87925513:+ INFRAME Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-EJ-5521-01A-01R-1580-07 PTEN-CTNNA3 3 7 chr10:87931089:+ chr10:67279078:- . Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-EJ-8472-01A-11R-2403-07 SUZ12-NF1 1 13 chr17:31966196:+ chr17:31381873:+ . Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-EJ-A7NM-01A-21R-A33R-07 FGFR3-AES 69 494 chr4:1806934:+ chr19:3061257:- INFRAME Likely Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-FC-A6HD-01A-11R-A31N-07 TMPRSS2-BRAF 29 141 chr21:41494356:- chr7:140781693:- FRAMESHIFT Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-G9-6364-01A-21R-1789-07 WBP1L-PTEN 11 1 chr10:102798095:+ chr10:87933013:+ INFRAME Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-HC-8260-01A-11R-2263-07 ATM-DDX10 2 12 chr11:108354874:+ chr11:108838446:+ INFRAME Likely Oncogenic Olaparib NA LEVEL_4 TCGA-HC-A48F-01A-11R-A250-07 NRP1-PTEN 1 30 chr10:33330708:- chr10:87957853:+ FRAMESHIFT Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-J4-A83I-01A-11R-A36G-07 PTEN-KCNMB4 2 8 chr10:87961118:+ chr12:70400209:+ INFRAME Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-KK-A6E8-01A-11R-A31N-07 ATM-CARD18 1 13 chr11:108347365:+ chr11:105139078:- INFRAME Likely Oncogenic Olaparib NA LEVEL_4 TCGA-VP-A87J-01A-11R-A352-07 PTEN-C1orf226 5 52 chr10:87894109:+ chr1:162383182:+ INFRAME Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-YL-A8SA-01A-21R-A37L-07 PTEN-GRID1 12 19 chr10:87931089:+ chr10:85729614:- FRAMESHIFT Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-ZG-A9KY-01A-11R-A41O-07 BRCA1-LSM12 1 6 chr17:43115726:- chr17:44036300:- FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-ZG-A9L9-01A-11R-A41O-07 FAM35A-PTEN 3 3 chr10:87095248:+ chr10:87925513:+ . Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-F5-6464-01A-11R-1736-07 TRIM24-BRAF 2 8 chr7:138571003:+ chr7:140850212:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-F5-6864-01A-11R-1928-07 PPP4R3B-ALK 4 6 chr2:55577315:- chr2:29717697:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-DX-A3LY-01B-11R-A27Q-07 NTRK1-DYNC2H1 1 10 chr1:156880157:+ chr11:103435943:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DX-A3M1-01A-11R-A22K-07 PTCH1-GAS1RR 10 29 chr9:95476034:- chr9:86981770:+ . Likely Oncogenic Sonidegib,Vismodegib NA LEVEL_3B TCGA-DX-A3M1-01A-11R-A22K-07 NF1-ASIC2 1000 1000 chr17:31233213:+ chr17:33112067:- INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-DX-A3UA-01A-12R-A30C-07 TPM3-NTRK1 12 113 chr1:154170400:- chr1:156875520:+ INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DX-A48J-01A-21R-A30C-07 NBEA-BRCA2 1 5 chr13:35196302:+ chr13:32325076:+ FRAMESHIFT Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-DX-A6B9-01A-12R-A32Q-07 PTCH1-TPM1 1 1 chr9:95461856:- chr15:63056985:+ INFRAME Likely Oncogenic Sonidegib,Vismodegib NA LEVEL_3B TCGA-DX-A6YX-01A-11R-A41I-07 NF1-RAB11FIP4 15 140 chr17:31249119:+ chr17:31517651:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-DX-A7EI-01A-11R-A33J-07 ARHGEF25-NTRK1 2 15 chr12:57615017:+ chr1:156871623:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DX-A8BM-01A-11R-A41I-07 BRAF-MED4 2 1 chr7:140801412:- chr13:48090418:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-HB-A3YV-01A-11R-A24X-07 SYNE1-ESR1 4 25 chr6:152244537:- chr6:152094385:+ FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-HB-A3YV-01A-11R-A24X-07 ESR1-SIM1 2 10 chr6:151702005:+ chr6:100393889:- . Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-HB-A43Z-01A-11R-A24X-07 BRAF-DENND2A 5 36 chr7:140834609:- chr7:140519718:- FRAMESHIFT Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-IW-A3M6-01A-11R-A21T-07 ACTG2-ALK 204 1535 chr2:73901437:+ chr2:29227074:- FRAMESHIFT Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-JV-A75J-01A-11R-A32Q-07 NF1-RPTOR 13 30 chr17:31095369:+ chr17:80625691:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-KF-A41W-01A-11R-A24X-07 VMP1-BRCA1 1 6 chr17:59773885:+ chr17:43082575:- INFRAME Likely Oncogenic Olaparib,Rucaparib,Niraparib NA LEVEL_2B TCGA-Z4-AAPG-01A-11R-A39D-07 PDGFRA-USP8 15 66 chr4:54290554:+ chr15:50459000:+ INFRAME Likely Oncogenic Imatinib NA LEVEL_2B TCGA-D3-A2JA-06A-11R-A18T-07 SHC2-PTEN 1 7 chr19:438718:- chr10:87894025:+ FRAMESHIFT Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-D3-A2JC-06A-11R-A18T-07 TAX1BP1-BRAF 20 78 chr7:27787603:+ chr7:140781693:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3A TCGA-D3-A8GE-06A-11R-A37K-07 LMNA-NTRK1 245 1022 chr1:156130773:+ chr1:156874906:+ INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3A TCGA-D9-A1X3-06A-11R-A18S-07 FAM193A-FGFR3 65 22 chr4:2537170:+ chr4:1801620:+ INFRAME Likely Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-DA-A1IA-06A-11R-A18S-07 AGK-BRAF 1 4 chr7:141555567:+ chr7:140794467:- INFRAME Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3A TCGA-FS-A1ZU-06A-12R-A18T-07 CDC27-BRAF 10 28 chr17:47129393:- chr7:140787584:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3A TCGA-Z2-AA3S-06A-11R-A39D-07 ALK-STK39 2 3 chr2:29717578:- chr2:168182090:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-BR-8058-01A-31R-2343-13 FGFR3-TACC3 4 0 chr4:1806934:+ chr4:1739702:+ INFRAME Oncogenic Debio1347,AZD4547,JNJ-42756493,BGJ398 NA LEVEL_3B TCGA-BR-8080-01A-11R-2343-13 FGFR2-TACC2 54 27 chr10:121483698:- chr10:122237395:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-BR-8080-01A-11R-2343-13 NF1-TEX14 2 5 chr17:31159093:+ chr17:58584600:- FRAMESHIFT Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-D7-6822-01A-11R-1884-13 PTCH1-FANCC 60 0 chr9:95476034:- chr9:95117390:- INFRAME Likely Oncogenic Sonidegib,Vismodegib NA LEVEL_3B TCGA-D7-A4YU-01A-21R-A251-31 NF1-RAB11FIP4 6 2 chr17:31095369:+ chr17:31431813:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-VQ-A8DU-01A-11R-A36D-31 NOTCH1-EXD3 10 3 chr9:136545726:- chr9:137395404:- . Likely Oncogenic PF-03084014 NA LEVEL_4 TCGA-VQ-A8PE-01A-11R-A414-31 TSC2-TBL3 12 5 chr16:2050487:+ chr16:1979878:+ . Likely Oncogenic Everolimus NA LEVEL_2B TCGA-BJ-A0Z0-01A-11R-A10U-07 FGFR2-OFD1 36 94 chr10:121483698:- chrX:13736478:+ INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-BJ-A0ZC-01A-12R-A13Y-07 PTEN-RUFY2 40 159 chr10:87865317:+ chr10:68343701:- . Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-BJ-A0ZJ-01A-11R-A10U-07 CCDC6-RET 25 96 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-BJ-A28Z-01A-11R-A16R-07 CCDC6-RET 10 83 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CE-A13K-01A-11R-A10U-07 CCDC6-RET 18 93 chr10:59794473:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CE-A13K-01A-11R-A10U-07 RET-MRLN 5 12 chr10:43113675:+ chr10:59738562:- . Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CE-A27D-01A-11R-A16R-07 ETV6-NTRK3 6 43 chr12:11853561:+ chr15:88033045:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-CE-A3MD-01A-11R-A20F-07 SSBP2-NTRK1 49 213 chr5:81446868:- chr1:156875520:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-CE-A481-01A-21R-A23W-07 TRIM27-RET 16 83 chr6:28920012:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CE-A482-01A-11R-A23W-07 NCOA4-RET 31 144 chr10:46012883:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CE-A482-01A-11R-A23W-07 RET-NCOA4 2 10 chr10:43114736:+ chr10:46011206:- INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-CE-A485-01A-11R-A23W-07 SPECC1L-RET 13 57 chr22:24338477:+ chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DE-A0Y2-01A-11R-A10U-07 MACF1-BRAF 79 229 chr1:39430908:+ chr7:140787584:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-DE-A0Y2-01A-11R-A10U-07 BRAF-MACF1 10 45 chr7:140794308:- chr1:39432535:+ INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-DE-A3KN-01A-11R-A20F-07 NCOA4-RET 24 124 chr10:46012883:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DE-A69K-01A-11R-A39I-07 DLG5-RET 50 191 chr10:77828882:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DJ-A2Q1-01A-22R-A19O-07 CCDC6-RET 2 23 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DJ-A3US-01A-11R-A22L-07 STRN-ALK 8 18 chr2:36916078:- chr2:29223528:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-DJ-A3UZ-01A-11R-A22U-07 SND1-BRAF 1 10 chr7:127721400:+ chr7:140787584:- INFRAME Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-DJ-A3V3-01A-11R-A22U-07 CCDC6-RET 30 76 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DJ-A4UP-01A-11R-A250-07 IRF2BP2-NTRK1 17 369 chr1:234608495:- chr1:156874571:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DJ-A4UQ-01A-11R-A250-07 CCDC6-RET 36 97 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DJ-A4UQ-01A-11R-A250-07 IRF2BP2-NTRK1 1 5 chr1:234608495:- chr1:156874571:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DJ-A4UT-01A-11R-A250-07 MALAT1-ALK 123 2118 chr11:65501796:+ chr2:29229068:- . Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-DJ-A4V0-01A-11R-A250-07 ETV6-NTRK3 4 15 chr12:11853561:+ chr15:88033045:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-DJ-A4V5-01A-11R-A250-07 CCDC6-RET 43 98 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DJ-A4V5-01A-11R-A250-07 RET-CCDC6 1 3 chr10:43114736:+ chr10:59852702:- INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-DO-A1JZ-01A-11R-A13Y-07 CCDC6-RET 47 122 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-E3-A3E0-01A-11R-A20F-07 CCDC6-RET 48 140 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-E8-A432-01A-11R-A23N-07 EML4-ALK 9 91 chr2:42264951:+ chr2:29227074:- INFRAME Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-E8-A438-01A-11R-A23W-07 ETV6-NTRK3 7 18 chr12:11853561:+ chr15:88033045:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-E8-A438-01A-11R-A23W-07 NTRK3-ETV6 3 10 chr15:88126271:- chr12:11869424:+ INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-E8-A44M-01A-21R-A23W-07 CCDC6-RET 15 72 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A3CY-01A-11R-A19O-07 CCDC6-RET 14 74 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A3D4-01A-11R-A19O-07 TPM3-NTRK1 40 170 chr1:154170400:- chr1:156874571:+ INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-EL-A3H3-01A-11R-A206-07 NCOA4-RET 21 97 chr10:46012883:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A3T0-01A-22R-A22L-07 BRAF-AP3B1 30 84 chr7:140794308:- chr5:78039274:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-EL-A3T0-01A-22R-A22L-07 AP3B1-BRAF 2 7 chr5:78089393:- chr7:140787584:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-EL-A3T9-01A-21R-A22L-07 ERC1-RET 9 30 chr12:1236904:+ chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A3TB-01A-11R-A22L-07 CCDC6-RET 54 119 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A3ZK-01A-21R-A23N-07 BRAF-SND1 34 78 chr7:140787548:- chr7:128084724:+ INFRAME Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-EL-A3ZK-01A-21R-A23N-07 SND1-BRAF 4 34 chr7:128081501:+ chr7:140783157:- INFRAME Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-EL-A3ZN-01A-11R-A23N-07 ETV6-NTRK3 7 19 chr12:11853561:+ chr15:88033045:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-EL-A3ZP-01A-11R-A23N-07 CCDC6-RET 10 68 chr10:59906122:- chr10:43114587:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A3ZS-01A-12R-A23N-07 CCDC6-RET 10 108 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EL-A4KD-01A-11R-A250-07 GTF2IRD1-ALK 10 27 chr7:74521297:+ chr2:29223528:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-EM-A2CU-01A-12R-A180-07 NCOA4-RET 22 171 chr10:46012883:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EM-A3AN-01A-11R-A206-07 CCDC6-RET 21 103 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-EM-A3AO-01A-11R-A206-07 TFG-NTRK1 38 101 chr3:100736716:+ chr1:156874571:+ INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-EM-A3FP-01A-11R-A21D-07 VCL-FGFR2 13 26 chr10:73998375:+ chr10:121480021:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-EM-A3FQ-01A-11R-A21D-07 ERC1-RET 8 12 chr12:1444750:+ chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-ET-A2MX-01A-11R-A23N-07 BCL2L11-BRAF 5 17 chr2:111124139:+ chr7:140783157:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-ET-A39L-01A-12R-A19O-07 NTRK3-RBPMS 47 182 chr15:88126271:- chr8:30544494:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-ET-A39L-01A-12R-A19O-07 RBPMS-NTRK3 20 108 chr8:30504436:+ chr15:88033045:- INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-ET-A39R-01A-11R-A19O-07 CCDC6-RET 16 97 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-ET-A3BN-01A-11R-A19O-07 BRAF-FAM114A2 22 107 chr7:140783021:- chr5:154002969:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-ET-A3BN-01A-11R-A19O-07 FAM114A2-BRAF 2 15 chr5:154011241:- chr7:140781693:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-ET-A3DQ-01A-11R-A19O-07 FKBP15-RET 3 22 chr9:113170522:- chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-ET-A3DR-01A-11R-A19O-07 CCDC6-RET 29 102 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-ET-A40S-01A-11R-A23N-07 SQSTM1-NTRK1 263 1220 chr5:179825226:+ chr1:156874571:+ INFRAME Likely Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-ET-A40T-01A-11R-A23N-07 CCDC6-RET 26 92 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-FE-A3PD-01A-11R-A220-07 ETV6-NTRK3 9 71 chr12:11853561:+ chr15:88033045:- INFRAME Oncogenic Larotrectinib,Entrectinib NA LEVEL_3B TCGA-FK-A3SE-01A-11R-A22L-07 CCDC6-RET 79 276 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-FK-A3SG-01A-11R-A22L-07 AKAP13-RET 72 291 chr15:85741495:+ chr10:43116584:+ INFRAME Likely Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-FK-A4UB-01A-11R-A250-07 CCDC6-RET 1 8 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-FY-A40N-01A-11R-A23N-07 BRAF-SUGCT 16 303 chr7:140924566:- chr7:40749434:+ INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-FY-A40N-01A-11R-A23N-07 SND1-BRAF 8 20 chr7:127721400:+ chr7:140787584:- INFRAME Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-J8-A3O1-01A-11R-A21D-07 MKRN1-BRAF 14 49 chr7:140459007:- chr7:140787584:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-J8-A4HW-01A-11R-A250-07 CCDC6-RET 24 147 chr10:59906122:- chr10:43116584:+ INFRAME Oncogenic Cabozantinib Vandetanib NA LEVEL_2B TCGA-KS-A41I-01A-11R-A23N-07 BRAF-SND1 2 1 chr7:140794308:- chr7:128074502:+ INFRAME Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-KS-A4ID-01A-11R-A250-07 ZC3HAV1-BRAF 3 15 chr7:139073856:- chr7:140781693:- INFRAME Likely Oncogenic Cobimetinib,Trametinib KO-947,LTT462,BVD-523 NA LEVEL_3B TCGA-ZB-A96L-01A-11R-A42S-07 ALDH3A1-NF1 1 3 chr17:19748259:- chr17:31258344:+ . Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-5B-A90C-01A-11R-A37O-07 FGFR2-SHTN1 128 1067 chr10:121483698:- chr10:116948997:- INFRAME Likely Oncogenic Debio1347,JNJ-42756493,AZD4575,BGJ-398 NA LEVEL_3B TCGA-A5-A2K2-01A-11R-A18M-07 ALK-GALNT14 5 10 chr2:29296888:- chr2:30929487:- INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-AJ-A3IA-01A-11R-A213-07 ESR1-PDE7B 3 11 chr6:151808364:+ chr6:136108731:+ FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-BK-A139-01A-11R-A277-07 ESR1-SYNE1 11 7 chr6:151944508:+ chr6:152373219:- FRAMESHIFT Likely Oncogenic Fulvestrant,AZD9496 NA LEVEL_3B TCGA-BK-A139-01A-11R-A277-07 SUZ12-NF1 2 4 chr17:31976614:+ chr17:31248984:+ INFRAME Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4 TCGA-EO-A3AS-01A-11R-A19W-07 ALK-SCEL 4 14 chr2:29531915:- chr13:77627947:+ INFRAME Likely Oncogenic Crizotinib,Ceritinib,Alectinib,Brigatinib NA LEVEL_2B TCGA-EO-A3B1-01A-12R-A19W-07 PTEN-HECTD2 3 4 chr10:87864624:+ chr10:91500502:+ . Likely Oncogenic AZD8186,GSK2636771 NA LEVEL_4 TCGA-EO-A3KW-01A-11R-A22K-07 NF1-YPEL5 3 21 chr17:31201485:+ chr2:30156628:+ . Likely Oncogenic Trametinib,Binimetinib,LTT462,BVD523 NA LEVEL_4