Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	3208470	13725542	5374	0.0013
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	13728195	13728371	4	-1.2468
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	13731015	83528532	40346	0.0026
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	83531587	83534239	2	-1.5744
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	83534353	100142361	10348	0.0025
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	100144643	100144658	2	-1.5537
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	100144830	195586368	40608	0.0029
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	195587321	195588939	2	-1.5767
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	195593699	205764453	6377	9e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	205779471	205797997	3	-1.1779
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	1	205801489	245880329	26060	0.0037
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	474222	6812648	3703	0.0052
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	6816144	6817195	2	-1.3079
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	6819290	18447690	7829	0.0094
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	18454455	18454757	4	-0.98
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	18455232	46219590	15795	0.0088
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	46221800	46221823	2	-1.4397
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	46223000	86062607	22257	0.0097
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	86063682	86065510	4	-1.3375
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	86068570	105874902	6462	0.011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	105878155	105913180	28	0.5633
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	105913698	133513639	12917	0.0081
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	133515302	133515306	2	-2.5187
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	133515858	133758857	143	0.0105
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	133759685	133760680	3	-0.9036
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	133761251	134139490	182	0.0157
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	134139913	134141122	4	-1.0217
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	2	134144324	242124735	62009	0.0088
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	526235	124421847	67281	0
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	124423067	124423645	2	-1.8974
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	124427049	132866280	4746	0.0027
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	132871975	132872814	2	-1.942
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	132877194	181255996	25317	0.0013
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	181256187	181258895	2	-1.8406
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	181259476	181656230	218	-0.0226
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	181660313	181664718	2	-1.3617
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	181664750	190573145	4837	-0.0056
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	190577002	190581421	5	-0.9436
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	3	190584595	199023074	4000	-0.0027
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	1043934	84974063	46190	6e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	84974629	84975186	2	-1.7153
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	84978397	115225849	17114	-3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	115232262	115232852	4	-1.1226
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	115234141	125678855	5774	-0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	125679801	125682243	2	-1.6053
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	125682385	157624707	17252	0
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	157626456	157627865	5	-1.083
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	157634850	182334646	13235	0.0011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	182337494	182338186	3	-1.5134
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	4	182338683	189836143	3190	0.0026
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	5	967233	78136535	41697	0.0035
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	5	78136556	78136846	2	-1.8384
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	5	78137661	141995377	34836	0.0046
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	5	141998044	142000197	7	-1.1739
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	5	142002286	180293075	23992	0.0011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	959281	1523031	483	0.0177
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	1523756	1523769	2	-1.2811
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	1525212	23903674	15624	0.0015
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	23904157	23906003	5	-0.9365
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	23910978	150449804	68463	0.0025
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	150467215	150527288	41	0.5688
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	150534420	160822780	6932	-0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	160823612	160827124	4	-1.1046
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	6	160828441	170745844	4954	-0.0023
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	7	671810	158077879	81337	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	607667	1808923	558	-0.0123
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	1809846	1811649	5	-1.0003
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	1816214	41716399	23447	-0.0024
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	41719521	41719712	2	-1.768
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	41719805	75169384	16651	-0.0029
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	75170619	75171166	3	-1.202
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	75172787	91677716	8904	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	91678962	91693108	12	-0.6168
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	91701035	136689965	27768	8e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	136692574	136694147	6	-0.8162
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	8	136699452	145304484	4194	-0.005
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	9	779932	120264552	57078	0.0031
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	9	120265228	120267532	6	-1.3706
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	9	120268798	140058573	10943	0.0036
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	10	405240	121869043	72439	0.0022
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	10	121869863	121886588	19	-0.5952
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	10	121888984	126566457	3580	7e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	10	126568758	126569148	3	-0.968
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	10	126570496	135075077	4854	-0.006
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	11	446120	102712704	56765	-2e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	11	102713430	102713593	2	-1.8279
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	11	102715194	125775584	15169	0.006
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	11	125777270	125779242	3	-1.1811
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	11	125783285	133647740	5344	0.002
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	760163	22308598	12424	0.0041
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	22308608	22311777	2	-2.764
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	22311864	119016965	55735	0.0015
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	119018079	119018092	2	-1.4541
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	119021017	127518091	4319	0.0046
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	127520771	127521384	3	-1.1824
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	12	127524846	131671419	1487	0.011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	18348806	18583813	165	-0.0381
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	18584549	18585702	3	-1.2306
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	18588076	65790828	26858	-6e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	65791961	65796867	3	-1.2537
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	65799358	75260740	5546	0.0019
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	75261656	75265194	7	-0.9976
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	13	75268565	114005560	24088	-0.0015
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	14	19571208	37053424	9593	0.004
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	14	37058307	37061449	3	-1.1712
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	14	37066615	105059083	39866	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	15	21238778	54522982	17647	5e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	15	54523720	54523870	3	-1.4381
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	15	54525217	99701830	26897	0.0038
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	593460	71454221	29762	-0.004
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	71456273	71456365	2	-1.4131
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	71458829	78508212	5232	-0.0025
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	78509863	78510607	3	-1.0199
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	78511750	79144221	538	-0.011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	79148871	79148886	2	-1.266
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	79150554	79205589	57	0.0045
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	79208269	79220382	17	-0.4587
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	79220547	83638349	2940	-0.0085
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	83638673	83656765	2	-1.2748
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	16	83658477	87907437	2314	0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	17	933971	78510305	36999	0.0033
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	18	319586	32665235	17766	-0.0029
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	18	32665300	32665681	5	-0.9574
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	18	32665775	75210228	24911	3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	19	235018	11272898	3838	-0.0088
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	19	11275351	11276056	3	-1.2162
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	19	11276796	63570038	20116	0.0018
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	20	403764	61690281	37289	0.0046
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	21	14269492	24672975	6309	0.0026
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	21	24673747	24708362	18	-1.0449
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	21	24712035	46503202	14264	0.0053
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	22	15803930	47717016	16930	-0.0013
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	3167107	46527141	19595	0.0099
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	46528197	46532562	4	-2.1489
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	46532712	46951299	195	-0.0077
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	46952355	46955205	4	1.0372
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	46955790	47663717	382	0.0246
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	47665460	47677995	7	-2.0737
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	47680029	57146346	3263	-0.0047
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	57146684	57149656	2	-3.8133
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	57149684	116735157	22959	0.0095
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	116735723	116735850	2	-4.5649
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A07_464738	X	116736107	154558783	17296	0.0104
