Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	3218610	88739923	49119	0.0015
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	88740566	88740865	4	-0.9137
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	88741916	194021997	45993	0.0016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	194025452	194025971	4	-0.8971
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	194026432	226371986	20334	0.0022
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	226376429	226383452	5	-1.0201
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	226387353	230238569	2262	0.0048
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	230241400	230241897	5	-0.8473
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	1	230242580	247813706	11468	0.0059
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	484222	9866090	5648	0.0045
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	9869223	9869959	4	-0.9431
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	9875236	55806503	26799	0.0065
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	55807275	55807288	2	-1.1486
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	55809190	85332445	16604	0.0033
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	85332460	85333406	2	-1.8855
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	85333976	158972369	34199	0.008
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	158975570	158977146	2	-1.3875
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	158983162	233896031	42805	0.0084
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	233896498	233897161	3	-1.3006
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	2	233897414	242476062	5279	0.0117
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	2212571	28923343	15663	0.0063
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	28923583	28924887	5	-0.8552
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	28925855	30191123	870	0.0012
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	30192544	30192565	2	-1.3568
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	30192777	32077500	1301	0.0042
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	32078374	32083482	4	-1.1212
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	32084097	85087748	30617	0.0037
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	85091420	85091440	2	-1.4019
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	85092341	130231537	22974	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	130233917	130234103	2	-1.1174
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	130235413	165022914	18413	0.0108
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	165030679	165031515	4	-1.2353
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	3	165093633	197538677	16563	0.0127
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	1053934	58522810	31967	-0.0012
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	58526609	58527283	3	-1.31
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	58527457	91938172	18493	5e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	91938392	91938509	2	-1.2208
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	91938652	96746429	2591	3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	96746527	96746673	3	-1.3165
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	96746815	112212206	8550	-4e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	112212842	112216801	2	-1.2016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	112217810	131601583	10740	0.002
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	131602946	131603050	2	-1.3486
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	131603236	136681841	2099	-0.0081
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	136682618	136685524	3	-1.2127
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	136688946	167698191	17567	9e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	167698563	167699082	2	-1.0047
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	167701061	167959102	149	-0.037
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	167959369	167959646	3	-1.1611
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	4	167961735	188763651	10610	0.0016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	5	914233	180360469	100545	0.0013
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	1014281	3015196	1546	0.0076
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	3015464	3015898	5	0.523
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	3016057	3637771	392	0.0135
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	3640209	3645465	7	0.549
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	3654037	24322037	14491	0.0061
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	24325809	24326285	2	-1.0818
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	6	24328706	170903919	80084	-0.0063
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	7	705284	101162131	51079	4e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	7	101162551	101163394	2	-1.6206
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	7	101165033	158385118	30269	0.0014
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	8	617667	25916018	14704	-0.0028
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	8	25916764	25916964	4	-0.9513
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	8	25917074	120273084	51236	4e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	8	120273910	120275688	3	-1.1089
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	8	120275927	145232496	15625	0.0011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	789932	88279765	35460	-2e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	88279789	88280399	2	-1.1233
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	88285598	118040430	19301	-1e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	118041945	118042551	4	-0.7474
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	118043489	120174814	1544	0.0017
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	120179421	120180032	3	-0.9545
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	9	120180707	140938752	11733	-0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	10	415240	135225087	80900	4e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	456120	7867963	3801	-0.0014
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	7869530	7869920	3	-0.9938
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	7879176	47720053	25951	-0.0032
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	47722233	47727404	3	-1.3019
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	47732291	68734221	6291	-0.0046
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	68734892	68743662	3	-1.1019
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	68744845	116681008	29228	0.0025
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	116683494	116684767	4	-1.0436
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	11	116690578	134142530	11996	-0.0014
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	889902	29720911	17141	-0.0016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	29723948	29724061	3	-1.0128
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	29724122	54591704	10709	0.0012
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	54593062	54601161	5	-1.2774
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	54604203	64401238	5587	0.005
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	64401412	64401840	3	-0.8477
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	64404802	75185912	6620	-2e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	75186011	75186314	2	-2.189
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	12	75187700	133161346	33903	0.0025
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	13	19450806	93211375	42508	-0.002
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	13	93214168	93214363	2	-1.1552
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	13	93216522	112854202	13405	0.0032
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	13	112854793	112855199	3	-1.0482
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	13	112857665	114987458	754	5e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	20501368	49494808	14725	-0.003
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	49499844	49499961	3	-1.13
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	49502424	51554981	1190	0.0027
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	51558513	51558540	2	-1.1616
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	51558823	104524512	33179	-3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	104527592	104528384	2	-1.0852
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	14	104530951	105988038	365	0.003
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	15	23687685	101884307	44546	0.0018
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	16	653459	2021068	354	-0.014
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	16	2025206	2032055	4	-0.8594
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	16	2036048	89379936	40454	-6e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	17	987221	35133721	13978	0.0023
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	17	35133887	35133963	2	-1.4248
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	17	35134725	80917016	23022	-5e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	18	329586	14546405	8185	0.0022
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	18	14553724	14560514	3	-1.1089
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	18	14569398	57870179	24461	0.0013
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	18	57873156	57873165	2	-1.1081
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	18	57873750	77109240	10030	0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	19	284018	58878226	23959	-0.0043
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	20	455764	62219837	37298	8e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	21	15347621	47678774	20593	3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	22	17423930	27232480	2813	0.0115
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	22	27236071	27236086	2	-1.1846
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	22	27236603	49331012	14117	0.0116
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	X	3157107	143778621	58887	0.0016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	X	143778977	143785562	2	-1.2717
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_A11_464754	X	143785583	154905589	4928	8e-04
