Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	3208470	172240651	82856	-2e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	172245668	172246042	2	-1.5525
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	172253581	191402003	11482	-3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	191402221	191405182	2	-1.0065
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	191405345	197266439	3368	0.0043
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	197268849	197268867	2	-1.2837
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	1	197271332	245880329	31427	0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	474222	3762245	1387	0.0016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	3764400	3764812	3	-1.0616
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	3764889	51511565	29029	0.0071
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	51511649	51512068	3	-1.0489
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	51512228	97926596	20723	0.007
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	97928848	97934452	3	-1.2305
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	97939275	151631193	28125	0.0087
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	151633821	151634219	2	-1.1602
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	151634884	192398223	23322	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	192400753	192407886	3	-0.9988
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	192407944	202131111	4700	0.0062
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	202131640	202131949	3	1.0862
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	202134952	213585320	6686	0.0055
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	213586868	213587652	2	-1.1758
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	2	213587877	242124735	17364	0.0056
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	3	526235	199023074	106427	-0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	1043934	13919505	7796	-1e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	13921132	13921405	3	-0.8996
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	13922901	27297932	8853	0.0017
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	27302622	27303287	4	-1.4117
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	27303991	107705708	42205	0.0014
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	107719713	107720288	3	-1.4312
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	4	107722658	189836143	43918	0.0029
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	5	967233	6553195	3952	0.0056
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	5	6555154	6555568	3	-0.8871
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	5	6556005	39944469	19209	0.007
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	5	39946720	39954210	2	-1.2372
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	5	39959082	180293075	77383	-7e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	959281	4731489	2656	-0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	4732159	4732795	3	-0.9312
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	4734258	6799765	1619	0.0076
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	6802268	6802319	2	-1.2298
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	6804325	24430016	12160	0.0053
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	24433788	24434264	2	-1.0716
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	24436685	38569238	5900	0.0074
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	38571814	38572604	3	-1.0155
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	38573634	69760490	15513	0.0023
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	69763552	69763910	2	-1.3809
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	69764350	93128592	13280	-6e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	93128816	93129408	5	-0.8306
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	93130505	107002561	7401	-0.0017
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	107003343	107004958	2	-1.273
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	107005114	116217828	5544	0.0012
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	116218334	116218421	2	1.3095
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	116218990	135377122	11291	-0.0028
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	135383947	135384931	2	-1.138
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	135391263	140020113	3057	-2e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	140020499	140023508	3	-1.1305
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	6	140027480	170745844	18075	-0.0011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	671810	20011385	9366	0.0028
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	20014730	20014750	2	-1.1722
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	20015001	53387956	22055	4e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	53387975	53387982	2	-1.2237
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	53395444	65524532	2665	0.0019
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	65525905	65525914	2	-1.1105
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	7	65534791	158077879	47260	0.0035
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	607667	1448069	318	-0.0154
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	1449229	1449851	2	1.5776
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	1450364	4437055	1653	0.0065
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	4437122	4438873	8	-0.4528
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	4438904	10707484	2434	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	10707500	10707518	2	-1.3973
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	10707960	50021984	21379	9e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	50023131	50075932	35	0.6136
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	8	50082342	145304484	55736	-0.0026
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	9	779932	140058573	68037	-3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	10	405240	135075077	80904	-3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	11	446120	133647740	77293	-7e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	760163	58922939	31299	-0.0034
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	58931144	58932351	3	-0.8941
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	58936112	81878633	13922	1e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	81878986	81878988	2	-1.137
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	81879092	123664160	25032	0.0018
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	123667787	123669125	3	-1.4506
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	12	123671664	131671419	3716	-0.0011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	13	18348806	41575308	14692	0.0011
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	13	41575419	41575500	2	1.4751
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	13	41576357	113318756	41861	0.0041
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	13	113319372	113319716	3	-1.3725
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	13	113320887	114005560	118	-0.012
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	14	19571208	61069456	22720	-0.001
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	14	61070830	61071109	2	-1.6497
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	14	61071309	67028232	3426	8e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	14	67033851	67033981	2	1.0964
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	14	67034108	105059083	23316	0.0015
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	15	21238778	31509029	3915	-1e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	15	31513200	31514051	2	-1.5578
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	15	31515161	99701830	40631	5e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	16	593460	85328425	39880	0.0041
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	16	85328570	85329346	3	1.1188
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	16	85331825	87907437	993	0.0021
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	17	933971	30021426	13025	0.0054
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	17	30024199	30024379	2	-1.4763
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	17	30028202	78129204	23749	0.0022
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	17	78129235	78129600	7	-0.7075
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	17	78129800	78510305	216	-0.0028
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	319586	13376035	7669	-0.0019
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	13377626	13377737	2	-1.4572
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	13379227	40558283	14637	-0.0016
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	40561970	40561986	2	-1.3953
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	40562170	73977244	19741	-1e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	73977637	73977820	3	-1.2208
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	18	73980835	75210228	631	0.0166
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	19	235018	38893549	13208	0.0046
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	19	38895287	38895934	2	1.2979
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	19	38897753	63570038	10750	0.0025
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	20	403764	61690281	37294	1e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	21	14269492	46503202	20593	0.0052
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	22	15803930	47717016	16933	0.002
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	3167107	15637161	4869	0.0039
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	15637898	15641261	3	-1.5718
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	15644806	17693561	1056	-0.0119
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	17694193	17694577	3	-2.8638
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	17695284	19274221	520	-3e-04
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	19278690	19279016	2	-2.8042
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	19279096	117884281	40699	0.0057
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	117886145	117886462	3	-2.5415
WHERE_p_TCGA_GBMBatch16_SNP_S_GenomeWideSNP_6_H08_464764	X	117889551	154558783	16604	0.0044
