Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	1	3218610	247813706	128839	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	484222	17388272	10664	-0.0065
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	17396067	17396229	2	-1.8062
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	17396548	26710314	5593	-0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	26710421	26710544	3	-1.7237
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	26711136	45571703	10364	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	45573050	45575800	7	-1.6443
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	2	45579797	242476062	104394	-0.007
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	3	2212571	197538677	106286	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	4	1053934	13270409	7018	0.0034
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	4	13270876	13270954	2	2.2788
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	4	13270986	171065247	86743	0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	4	171068077	171070516	2	-2.7107
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	4	171075161	188763651	8912	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	5	914233	180360469	100409	0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	6	1014281	170903919	96389	0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	7	705284	158385118	81253	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	8	617667	145232496	81447	-9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	9	789932	140938752	67878	0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	10	415240	135225087	80685	-0.0037
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	11	456120	12218497	6880	-0.0062
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	11	12219203	12219308	2	-2.4847
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	11	12222345	119621500	60114	0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	11	119622162	119628675	7	-1.2709
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	11	119629249	134142530	10089	-0.0173
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	12	889902	94482114	51579	-0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	12	94483042	94485033	2	-2.3301
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	12	94485857	131875814	21808	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	12	131875983	131886071	3	-1.8732
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	12	131891698	133161346	401	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	13	19450806	37460648	11241	-0.003
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	13	37462010	37462040	2	-2.2913
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	13	37462261	114987458	45312	-0.003
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	14	20501368	105988038	49329	0
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	15	23687685	101884307	44417	-0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	16	653459	89379936	40665	0
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	17	987221	80917016	36833	0
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	18	329586	77109240	42598	-0.0092
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	19	284018	58878226	23837	0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	20	455764	62219837	37183	-0.0092
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	21	15347621	47678774	20531	-0.0054
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	22	17423930	49331012	16904	0.0082
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_C12_584590	X	3157107	154905589	63503	0.0125
