Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	3218610	4734076	948	0.0483
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	4734514	4735908	3	1.459
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	4736456	5470742	487	0.08
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	5470926	5471517	2	-1.4689
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	5472240	37041357	16180	0.2529
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	37046145	42990523	3327	1.3861
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	42993148	72134563	18025	0.2799
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	72134672	72267554	83	-0.1235
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	72268140	160006574	33893	0.2651
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	160010151	160138840	72	0.9778
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	160145586	226965334	42571	0.1561
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	226965646	226967446	3	2.1424
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	226968814	236286070	5980	0.1607
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	236290557	236290705	3	-1.2771
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	236291032	238240403	1577	0.1371
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	238247683	238258281	12	-1.0092
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	238258907	239957601	1262	0.1477
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	239958142	239980546	19	-1.1024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	239982376	242655301	1984	0.1504
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	242655943	242669303	29	-0.9649
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	1	242673425	247813706	2464	0.1684
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	484222	2024210	262	-0.0124
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	2026586	2089522	35	-0.9255
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	2091344	2164676	40	-0.0373
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	2169254	2177927	10	-1.1822
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	2181009	7513524	3819	-0.0115
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	7516653	8092958	314	-1.4739
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	2	8161590	242476062	126601	-0.0299
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	2212571	12907090	6383	0.3053
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	12907356	12908200	2	-1.4203
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	12915605	52436424	22265	0.3053
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	52441606	52544592	42	0.9694
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	52551770	84269624	19291	0.2393
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	84269729	84270435	2	-1.462
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	84272114	157434583	38190	0.2494
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	157437011	157441617	3	-1.2361
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	3	157441619	197538677	20157	0.257
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	4	1053934	53807186	28729	-0.2577
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	4	53812949	55863556	1612	1.193
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	4	55867442	57881731	1104	0.5649
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	4	57884435	188763651	71227	-0.2917
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	914233	71735304	37721	0.2349
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	71740310	71892665	105	0.8961
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	71897955	114756455	23211	0.2279
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	114756637	114756862	5	-1.3369
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	114759078	115820426	578	0.2105
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	115822858	117123916	787	-0.8847
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	117127205	117740500	372	0.2237
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	117753296	117787387	26	-0.9727
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	117791688	117794095	3	0.3369
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	117796192	118049776	173	-0.9009
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	5	118057690	180360469	37491	0.2185
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	6	1014281	148862143	83552	-0.0406
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	6	148862377	148868888	3	-1.6566
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	6	148874066	170903919	12903	-0.0267
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	705284	37463968	21129	0.7688
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	37466564	37468065	5	-0.4762
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	37470284	145989486	53740	0.7766
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	146093083	148177868	1407	-0.3053
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	148180894	154129321	2517	0.7288
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	154129785	154404190	137	1.1843
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	7	154404264	158385118	2365	0.8145
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	8	617667	145232496	81496	0.2058
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	9	789932	140938752	67917	0.2579
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	415240	43391367	26166	-0.8995
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	43391394	43394983	3	-3.2494
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	43395167	52523595	3181	-0.9264
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	52524783	52539579	5	-3.6472
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	52539970	126707622	46221	-0.8794
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	126709953	126711050	2	-6.3418
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	10	126711107	135225087	4744	-0.9328
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	456120	45750858	28878	-0.1313
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	45756960	46728829	438	-1.6696
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	46731662	59259227	2969	-0.1454
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	59259637	59260296	2	-1.9321
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	59262459	99726498	21934	-0.0266
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	99729908	100155446	336	-0.8616
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	11	100155500	134142530	22567	0.0051
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	12	889902	3703500	1335	-0.1328
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	12	3705763	3807105	89	0.5313
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	12	3813090	105537689	57397	-0.1558
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	12	105543666	105648213	88	-0.4833
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	12	105648500	133161346	14901	-0.1663
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	19450806	25979038	3195	-0.8703
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	25979656	25981163	2	-6.1962
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	25982629	42677308	11386	-0.8757
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	42677419	42677500	2	1.643
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	42678357	92904003	27504	-0.8432
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	92905537	92908890	2	-3.3428
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	92908985	101714231	5635	-0.8714
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	101714745	101717014	2	-3.7385
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	13	101718165	114987458	8637	-0.8819
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	20501368	58450523	20593	0.2441
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	58451020	58452206	3	-1.9373
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	58455758	69159748	6232	0.2543
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	69162671	69246588	72	0.9404
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	69288432	73102323	2459	0.2641
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	73110483	73112474	2	-1.4933
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	14	73113064	105988038	19999	0.2499
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	15	23687685	101884307	44262	-0.8265
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	16	653459	89379936	40698	0.2473
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	17	987221	7485673	3104	0.032
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	17	7499349	7557017	23	-0.8629
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	17	7560501	7583743	6	-4.5002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	17	7591761	7617432	10	-1.1494
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	17	7621464	80917016	33711	0.1178
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	18	329586	29832992	14883	0.135
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	18	29836631	29838811	6	-0.9274
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	18	29841278	29854756	17	0.8818
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	18	29854892	77109240	27715	0.1359
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	19	284018	58878226	23845	0.0538
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	20	455764	20725119	13572	0.2463
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	20	20730079	20755463	21	-0.8042
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	20	20757612	20786222	23	0.156
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	20	20792180	20795251	5	-0.8659
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	20	20796743	62219837	23582	0.2443
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	21	15347621	25585384	6185	0.2245
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	21	25588249	25588339	3	-1.1351
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	21	25588956	47678774	14355	0.2342
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	22	17423930	48766050	16384	-0.92
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	22	48766147	48766911	4	-5.0556
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	22	48768196	49331012	412	-1.0385
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	X	3157107	11581402	2387	0.019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	X	11582678	12234216	557	-1.4056
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	X	12235902	29046158	8528	0.0138
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	X	29051369	29155730	62	-0.3111
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_D10_584634	X	29160408	154905589	52117	0.011
