Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	1	3208470	245880329	128870	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	2	474222	242124735	131128	-0.0073
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	3	526235	199023074	106339	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	1043934	55253640	30046	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	55253655	55253668	2	-1.5758
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	55253691	65451066	5664	0.0091
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	65452039	65456713	2	2.1221
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	65457302	74589429	4183	0.0036
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	74589702	74590626	4	-1.5461
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	74591618	189836143	62811	-0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	967233	153824996	84306	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	153825186	153825256	2	-1.8209
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	153836680	171124642	11359	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	171126843	171127495	3	-1.2504
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	171127732	180293075	4801	0.0054
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	6	959281	102095513	55720	-0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	6	102096160	102096176	2	-1.6806
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	6	102102160	170745844	40736	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	7	671810	158077879	81296	0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	8	607667	39069141	22393	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	8	39072152	39072524	2	-2.0736
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	8	39074374	145304484	59103	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	9	779932	33113386	19965	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	9	33114862	33114872	2	-1.8744
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	9	33115279	140058573	47941	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	10	405240	135075077	80752	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	11	446120	34899412	21969	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	11	34899453	34899581	6	-1.0348
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	11	34899805	133647740	55180	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	12	760163	21454411	11812	-0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	12	21458872	21476525	7	-1.3906
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	12	21476881	131671419	62017	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	13	18348806	25034606	3327	-0.0044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	13	25035813	25036126	3	-1.5988
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	13	25039486	114005560	53264	0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	14	19571208	105059083	49356	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	15	21238778	99701830	44450	-3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	16	593460	87907437	40770	0.0056
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	17	933971	34201166	14770	0.0081
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	17	34202579	34232263	15	-1.0204
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	17	34233321	78510305	22071	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	18	319586	75210228	42633	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	19	235018	63570038	23852	0.0101
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	20	403764	61690281	37199	0.0023
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	14269492	42177053	18450	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	42177255	42180610	2	1.7589
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	42180969	43031474	656	0.0079
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	43031789	43034331	2	1.6073
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	43036112	46503202	1438	0.003
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	22	15803930	47717016	16918	0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	3167107	5825125	288	0.0045
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	5825383	5825502	2	-5.098
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	5828936	17693561	5619	0.0155
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	17694193	17694577	3	2.4138
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	17695284	50069875	14952	0.0058
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	50070910	50073062	2	3.0294
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	50078471	57408540	2648	0.0045
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	57410827	57411153	2	-3.4318
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	57411269	70269142	3526	0.0129
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	70269241	70271613	3	-2.8985
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	70271811	96994406	10071	-0.0016
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	96994721	96998404	3	-3.2737
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	97001002	119685758	10808	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	119686175	119686649	2	-4.8579
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	119690426	154558783	15650	0.0053
