Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	1	3218610	247813706	128926	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	2	484222	242476062	131120	-0.0073
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	3	2212571	197538677	106333	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	1053934	55558883	30045	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	55558898	55558911	2	-1.5758
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	55558934	65768471	5663	0.0092
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	65769444	65774118	2	2.1221
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	65774707	74370565	4182	0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	74370838	74371762	4	-1.5461
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	4	74372754	188763651	62819	-0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	914233	153844803	84305	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	153844993	153845063	2	-1.8209
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	153856487	171192037	11359	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	171194238	171194890	3	-1.2504
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	5	171195127	180360469	4802	0.0054
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	6	1014281	101988820	55722	-0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	6	101989467	101989483	2	-1.6806
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	6	101995467	170903919	40743	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	7	705284	158385118	81297	0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	8	617667	38949984	22393	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	8	38952995	38953367	2	-2.0736
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	8	38955217	145232496	59110	0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	9	789932	33123386	19969	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	9	33124862	33124872	2	-1.8744
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	9	33125279	140938752	47949	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	10	415240	135225087	80750	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	11	456120	34942836	21966	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	11	34942877	34943005	6	-1.0348
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	11	34943229	134142530	55173	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	12	889902	21563144	11809	-0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	12	21567605	21585258	7	-1.3906
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	12	21585614	133161346	62015	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	13	19450806	26136606	3327	-0.0044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	13	26137813	26138126	3	-1.5988
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	13	26141486	114987458	53260	0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	14	20501368	105988038	49354	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	15	23687685	101884307	44448	-3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	16	653459	89379936	40704	0.0056
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	17	987221	36947640	14768	0.0081
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	17	36949053	36978737	15	-1.0204
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	17	36979795	80917016	22073	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	18	329586	77109240	42630	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	19	284018	58878226	23852	0.0101
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	20	455764	62219837	37202	0.0023
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	15347621	43303984	18450	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	43304186	43307541	2	1.7589
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	43307900	44158405	656	0.0079
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	44158720	44161262	2	1.6073
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	21	44163043	47678774	1437	0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	22	17423930	49331012	16917	0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	3157107	5815125	288	0.0045
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	5815383	5815502	2	-5.098
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	5818936	17783640	5620	0.0156
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	17784272	17784656	3	2.4138
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	17785363	50053135	14952	0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	50054170	50056322	2	3.0294
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	50061731	57391815	2650	0.0047
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	57394102	57394428	2	-3.4318
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	57394544	70352417	3533	0.0122
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	70352516	70354888	3	-2.8985
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	70355086	97107750	10072	-0.0016
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	97108065	97111748	3	-3.2737
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	97114346	119801730	10815	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	119802147	119802621	2	-4.8579
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E02_584546	X	119806398	154905589	15649	0.0054
