Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	3218610	5986484	1858	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	5988926	5989273	2	-1.9154
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	5989929	10977102	2463	0.0096
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	10977123	10980580	2	1.6779
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	10983230	19018131	4150	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	19018405	19019980	3	-1.6244
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	1	19020358	247813706	120445	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	2	484222	222471013	119181	-0.0043
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	2	222471460	222471516	2	2.3157
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	2	222472562	241313594	11392	-0.0129
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	2	241315450	241318725	2	-2.2858
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	2	241321004	242476062	540	0.0079
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	3	2212571	148274505	80888	9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	3	148286006	148286193	2	-2.1625
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	3	148286353	197538677	25441	-9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	4	1053934	188763651	102720	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	914233	60851776	32553	-0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	60852806	60870130	17	-1.4451
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	60871010	111277851	26041	-0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	111280401	111281611	2	-2.0744
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	111284646	127348478	9719	0.008
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	127349135	127349191	2	-1.7325
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	127352404	134564688	4074	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	134566648	134569242	2	-1.5957
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	134569970	154905984	12519	0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	154911842	154928280	9	0.9397
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	5	154929106	180360469	15531	-0.0022
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	6	1014281	170903919	96471	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	7	705284	100787402	50972	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	7	100789511	100800083	7	1.1712
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	7	100800131	158385118	30307	-0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	8	617667	145232496	81501	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	9	789932	140938752	67913	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	10	415240	33445364	22850	-0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	10	33445701	33476141	18	0.6018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	10	33483097	132125067	57144	0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	10	132126055	132126195	3	-1.5078
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	10	132126298	135225087	730	0.0032
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	11	456120	18322534	11012	0.0055
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	11	18325131	18325146	2	-1.7803
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	11	18325708	18687025	155	-0.0388
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	11	18688579	18698751	11	-1.2323
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	11	18704862	134142530	65961	0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	12	889902	127355102	71633	0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	12	127356980	127359192	6	-1.0962
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	12	127362832	128925961	687	-0.0029
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	12	128926728	128926744	2	-1.4575
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	12	128927198	133161346	1500	0.0055
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	13	19450806	114987458	56590	-0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	14	20501368	105988038	49356	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	15	23687685	101884307	44444	-0.003
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	16	653459	5383906	1814	-0.0024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	16	5384318	5384402	2	1.7781
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	16	5384465	89379936	38889	-0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	17	987221	19194237	8824	0.006
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	17	19195916	19205239	6	-1.1437
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	17	19205526	80917016	28022	-0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	18	329586	21698036	9783	-0.0065
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	18	21698210	21702089	3	-1.4918
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	18	21702814	34404924	7956	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	18	34411076	34411683	7	-1.0136
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	18	34411777	77109240	24879	-0.0024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	19	284018	58878226	23849	0.0042
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	20	455764	14158256	8705	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	20	14162285	14162310	2	-2.0193
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	20	14163979	62219837	28498	-0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	21	15347621	22920847	4830	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	21	22921162	22925074	2	-1.7826
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	21	22925625	47678774	15713	-0.0023
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	22	17423930	49331012	16913	0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	X	3157107	52655979	21848	-9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	X	52659084	52706693	15	0.6257
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	X	52766214	71408176	5600	-0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	X	71411659	71501699	34	-0.4114
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_E04_584692	X	71502810	154905589	36167	0.0016
