Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	1	3208470	245880329	128835	-3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	474222	17251753	10672	-0.0096
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	17259548	17259710	2	1.7001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	17260029	48432177	17982	-0.0063
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	48437978	48438330	3	-1.4884
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	48439467	58385966	5198	-0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	58393180	58393389	2	-1.7527
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	58397401	129581227	33622	-0.0058
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	129581612	129582024	2	-2.264
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	129582131	233499155	58282	-0.0068
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	233499852	233500353	2	-1.9998
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	233504719	242124735	5336	-0.0042
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	3	526235	199023074	106327	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	1043934	5209585	1871	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	5210153	5210555	2	-1.8898
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	5211672	80212846	41552	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	80213061	80219805	2	-2.4135
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	80220734	189836143	59269	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	967233	4543338	2256	-0.0066
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	4544133	4544273	3	1.2732
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	4544592	58311357	28815	0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	58311947	58312211	3	-1.7589
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	58313749	73187435	7515	0.0112
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	73193684	73220562	15	-0.5418
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	73221260	78680544	3355	0.002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	78683014	78685197	3	-2.2852
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	78686849	180293075	58478	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	6	959281	135621458	75559	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	6	135625527	135625756	2	-1.9255
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	6	135625991	170745844	20878	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	671810	24001652	12180	0.002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	24006403	24006908	2	1.9214
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	24007342	40762351	11004	0.0046
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	40764185	40764674	2	-1.4266
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	40766226	55503579	9658	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	55505587	55505718	2	-2.5212
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	55507626	154828864	46661	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	154829361	154837736	2	-1.7446
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	154840907	158077879	1766	-0.0068
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	8	607667	102750513	56054	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	8	102750936	102752507	4	-1.4297
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	8	102758495	145304484	25423	0.0091
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	9	779932	7674317	4129	0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	9	7674760	7675999	2	-2.6554
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	9	7678633	140058573	63762	0.0024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	405240	18543198	12832	0.0016
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	18544693	18545319	3	-1.4316
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	18545454	80548225	34020	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	80549748	80549771	2	-1.9394
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	80550441	135075077	33882	0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	11	446120	133261397	77029	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	11	133261648	133266342	3	2.022
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	11	133270337	133647740	109	0.0219
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	12	760163	131671419	73821	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	18348806	35227287	10393	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	35230762	35231372	2	2.0391
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	35231519	71669047	19679	0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	71669715	71670052	2	-1.8587
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	71672136	103455533	20191	0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	103462632	103463267	4	-1.2848
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	103463422	114005560	6322	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	14	19571208	105059083	49351	0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	15	21238778	99701830	44433	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	16	593460	87907437	40756	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	933971	60335041	27541	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	60356179	60356500	2	-2.004
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	60357151	75662583	8262	-0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	75668697	75668839	2	1.6044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	75668984	78510305	1040	0.0061
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	18	319586	67178285	38908	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	18	67180662	67180858	2	-1.6929
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	18	67181334	75210228	3710	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	19	235018	10061339	3323	-0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	19	10073986	10076061	3	-2.0313
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	19	10079959	63570038	20516	0
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	20	403764	61690281	37189	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	21	14269492	20799241	4084	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	21	20801025	20805316	4	-1.2822
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	21	20807173	46503202	16452	-0.0054
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	22	15803930	47717016	16909	0.0029
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	3167107	43210267	17832	0.0092
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	43210389	43213846	5	-2.8518
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	43218076	86603321	15634	0.0166
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	86603452	86603708	4	-3.7174
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	86604826	154558783	30045	0.0193
