Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	1	3218610	247813706	128891	-3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	484222	17388272	10670	-0.0096
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	17396067	17396229	2	1.7001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	17396548	48578673	17980	-0.0063
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	48584474	48584826	3	-1.4884
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	48585963	58532462	5198	-0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	58539676	58539885	2	-1.7527
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	58543897	129864757	33617	-0.0058
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	129865142	129865554	2	-2.264
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	129865661	233790911	58282	-0.0068
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	233791608	233792109	2	-1.9998
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	2	233796475	242476062	5337	-0.0042
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	3	2212571	197538677	106321	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	1053934	5158684	1871	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	5159252	5159654	2	-1.8898
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	5160771	79993822	41548	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	79994037	80000781	2	-2.4135
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	4	80001710	188763651	59278	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	914233	58275600	31074	0.0023
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	58276190	58276454	3	-1.7589
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	58277992	73151679	7516	0.0111
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	73157928	73184806	15	-0.5418
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	73185504	78644788	3355	0.002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	78647258	78649441	3	-2.2852
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	5	78651093	180360469	58477	-7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	6	1014281	135579765	75566	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	6	135583834	135584063	2	-1.9255
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	6	135584298	170903919	20880	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	705284	24035127	12182	0.002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	24039878	24040383	2	1.9214
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	24040817	40795826	11003	0.0046
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	40797660	40798149	2	-1.4266
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	40799701	55536085	9656	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	55538093	55538224	2	-2.5212
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	55540132	155136116	46663	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	155136613	155144982	2	-1.7446
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	7	155148146	158385118	1766	-0.0068
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	8	617667	102681337	56058	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	8	102681760	102683331	4	-1.4297
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	8	102689319	145232496	25426	0.0091
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	9	789932	7684317	4129	0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	9	7684760	7685999	2	-2.6554
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	9	7688633	140938752	63774	0.0024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	415240	18503192	12832	0.0016
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	18504687	18505313	3	-1.4316
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	18505448	80878219	34019	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	80879742	80879765	2	-1.9394
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	10	80880435	135225087	33881	0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	11	456120	133756187	77019	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	11	133756438	133761132	3	2.022
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	11	133765127	134142530	109	0.0219
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	12	889902	133161346	73816	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	19450806	36329287	10391	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	36332762	36333372	2	2.0391
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	36333519	72771046	19677	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	72771714	72772051	2	-1.8587
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	72774135	104657532	20190	0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	104664631	104665266	4	-1.2848
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	13	104665421	114987458	6322	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	14	20501368	105988038	49349	0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	15	23687685	101884307	44431	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	16	653459	89379936	40690	-6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	987221	62904579	27541	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	62925717	62926038	2	-2.004
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	62926689	78047988	8262	-0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	78054102	78054244	2	1.6044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	17	78054389	80917016	1040	0.0061
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	18	329586	69027305	38905	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	18	69029682	69029878	2	-1.6929
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	18	69030354	77109240	3710	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	19	284018	10200339	3323	-0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	19	10212986	10215061	3	-2.0313
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	19	10218959	58878226	20516	0
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	20	455764	62219837	37192	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	21	15347621	21877370	4084	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	21	21879154	21883445	4	-1.2822
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	21	21885302	47678774	16451	-0.0054
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	22	17423930	49331012	16908	0.003
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	3157107	43325323	17833	0.0091
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	43325445	43328902	5	-2.8518
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	43333132	86716665	15644	0.0168
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	86716796	86717052	4	-3.7174
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F04_584586	X	86718170	154905589	30052	0.0192
