Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	1	3208470	245880329	128878	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	2	474222	227665858	122706	-0.0072
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	2	227668965	227670201	2	1.7802
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	2	227670711	242124735	8423	-0.0128
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	3	526235	111507614	59570	0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	3	111507637	111507654	2	-2.2187
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	3	111510155	199023074	46778	0.0022
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	1043934	27817191	16945	0.0078
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	27819910	27819925	2	-1.5458
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	27825097	37436009	5720	-7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	37436339	37436348	2	-2.2168
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	37436749	43119209	3143	-0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	43119687	43119919	3	-2.5803
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	43123183	45709854	1291	0.0159
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	45711802	45716952	4	-1.2245
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	45720670	189836143	75618	0.0033
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	967233	2001736	153	0.0128
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	2002516	2003258	2	-2.1252
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	2003767	2831911	721	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	2835365	2835508	2	-1.8693
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	2835715	153824996	83433	0.0043
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	153825186	153825256	2	-1.8433
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	153836680	180293075	16165	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	6	959281	157458067	89491	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	6	157462093	157464268	2	-1.733
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	6	157473370	170745844	6975	0.005
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	671810	6422392	2131	-0.0171
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	6428728	6429171	3	-1.3873
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	6429576	25417893	11188	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	25418119	25418550	3	-1.2474
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	25419304	32413787	4539	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	32417579	32423902	9	-1.4131
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	32425301	49093212	10432	0.0093
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	49096032	49096459	3	-1.2501
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	49101981	117614772	31544	0.0051
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	117618979	117621960	3	-1.3734
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	117621966	157032350	21018	0.0029
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	157032874	157043601	4	-1.1589
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	157044516	158077879	421	0.0191
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	8	607667	41382798	23791	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	8	41383584	41387933	4	-1.4239
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	8	41391210	145304484	57710	0.0044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	9	779932	103321247	45461	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	9	103329436	103330642	3	1.3297
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	9	103339114	140058573	22456	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	405240	6397443	3851	-1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	6398110	6398221	2	-1.2849
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	6398324	11781329	4142	-0.0093
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	11782650	11788064	6	-0.9407
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	11790526	135075077	72761	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	446120	70959508	37497	-0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	70960616	70965820	8	-1.2047
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	70966199	104700011	20225	-0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	104700785	104701308	2	-1.513
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	104703679	113084808	5132	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	113085047	113085746	2	-2.2376
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	113086252	121525224	5968	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	121527747	121528137	2	-1.5547
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	121536217	133647740	8324	0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	12	760163	30507860	17826	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	12	30508563	30508569	2	-1.984
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	12	30519163	131671419	56020	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	13	18348806	114005560	56602	7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	14	19571208	87808481	39233	0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	14	87810678	87823405	13	0.7578
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	14	87824427	105059083	10118	-0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	15	21238778	99701830	44449	-1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	16	593460	87907437	40768	0.0016
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	933971	2227684	503	-0.011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	2230944	2240906	20	0.3645
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	2240922	3980031	839	-0.0231
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	3981205	3982198	4	-1.0312
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	3986794	78510305	35493	-0.0044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	18	319586	75210228	42635	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	19	235018	63570038	23852	0.0056
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	20	403764	61690281	37205	0.0061
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	21	14269492	46503202	20545	0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	22	15803930	47717016	16920	-0.0071
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	X	3167107	97177737	37232	9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	X	97178337	97182237	10	-1.9067
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	X	97184354	154558783	26361	-0.0023
