Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	1	3218610	247813706	128934	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	2	484222	227957614	122697	-0.0072
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	2	227960721	227961957	2	1.7802
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	2	227962467	242476062	8424	-0.0128
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	3	2212571	110024924	59565	0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	3	110024947	110024964	2	-2.2187
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	3	110027465	197538677	46777	0.0022
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	1053934	28208093	16945	0.0078
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	28210812	28210827	2	-1.5458
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	28215999	37759614	5720	-7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	37759944	37759953	2	-2.2168
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	37760354	43424452	3143	-0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	43424930	43425162	3	-2.5803
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	43428426	46015097	1291	0.0159
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	46017045	46022195	4	-1.2245
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	4	46025913	188763651	75623	0.0033
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	914233	1948736	153	0.0128
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	1949516	1950258	2	-2.1252
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	1950767	2778911	721	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	2782365	2782508	2	-1.8693
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	2782715	153844803	83432	0.0043
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	153844993	153845063	2	-1.8433
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	5	153856487	180360469	16166	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	6	1014281	157416375	89500	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	6	157420401	157422576	2	-1.733
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	6	157431678	170903919	6975	0.005
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	705284	6455867	2131	-0.0171
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	6462203	6462646	3	-1.3873
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	6463051	25451368	11190	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	25451594	25452025	3	-1.2474
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	25452779	32447262	4538	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	32451054	32457377	9	-1.4131
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	32458776	49122666	10431	0.0093
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	49125486	49125913	3	-1.2501
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	49131435	117827536	31546	0.0051
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	117831743	117834724	3	-1.3734
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	117834730	157339589	21017	0.0029
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	157340113	157350840	4	-1.1589
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	7	157351755	158385118	421	0.0191
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	8	617667	41263641	23791	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	8	41264427	41268776	4	-1.4239
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	8	41272053	145232496	57717	0.0044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	9	789932	104281426	45469	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	9	104289615	104290821	3	1.3297
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	9	104299293	140938752	22460	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	415240	6357437	3851	-1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	6358104	6358215	2	-1.2849
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	6358318	11741323	4142	-0.0093
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	11742644	11748058	6	-0.9407
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	10	11750520	135225087	72759	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	456120	71281860	37493	-0.0026
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	71282968	71288172	8	-1.2047
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	71288551	105194801	20221	-0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	105195575	105196098	2	-1.513
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	105198469	113579598	5130	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	113579837	113580536	2	-2.2376
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	113581042	122020014	5968	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	122022537	122022927	2	-1.5547
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	11	122031007	134142530	8324	0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	12	889902	30616593	17823	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	12	30617296	30617302	2	-1.984
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	12	30627896	133161346	56018	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	13	19450806	114987458	56598	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	14	20501368	88738728	39231	0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	14	88740925	88753652	13	0.7578
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	14	88754674	105988038	10118	-0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	15	23687685	101884307	44447	-1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	16	653459	53398685	18121	0.0051
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	16	53407559	53408793	6	-0.9386
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	16	53409275	89379936	22575	-9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	987221	2280934	503	-0.011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	2284194	2294156	20	0.3645
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	2294172	4033282	839	-0.0231
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	4034456	4035449	4	-1.0312
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	17	4040045	80917016	35493	-0.0044
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	18	329586	77109240	42632	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	19	284018	58878226	23852	0.0056
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	20	455764	62219837	37208	0.0061
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	21	15347621	47678774	20544	0.0028
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	22	17423930	49331012	16919	-0.0071
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	X	3157107	97291081	37243	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	X	97291681	97295581	10	-1.9067
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_F12_584572	X	97297698	154905589	26367	-0.0023
