Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	3208470	3760789	293	0.0129
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	3761208	3761263	2	-2.3912
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	3762219	206014930	102694	9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	206018344	206019280	2	-1.9171
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	206021673	214248103	5768	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	214248208	214252106	2	1.5101
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	214254105	214724471	282	0.0367
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	214732981	214733344	2	-2.0008
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	214733487	245880329	19809	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	2	474222	242124735	131111	-0.0058
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	526235	30166127	16528	0.0052
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30167548	30167569	2	-1.6011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30167781	30872247	517	0.0138
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30878747	30879296	5	-0.9564
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30879763	36567136	3427	-3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	36567376	36567966	4	-1.2544
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	36568475	199023074	85851	0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	4	1043934	189836143	102718	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	5	967233	180293075	100464	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	959281	12091901	7817	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	12092028	12093319	2	-2.6841
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	12094558	16130070	2805	-0.0085
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	16131889	16141044	10	-1.1984
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	16143306	36194130	10150	-6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	36195859	36199341	4	-1.7076
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	36202485	71127570	17879	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	71130969	71131867	4	-1.2639
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	71132609	170745844	57779	-0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	671810	115247586	58349	9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	115249686	115251703	4	-1.2946
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	115252956	158077879	22928	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	8	607667	145304484	81491	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	779932	104158442	45874	0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	104161855	104169815	12	0.674
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	104171212	128246065	16275	0.0039
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	128246230	128252925	2	1.4481
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	128256187	132252930	1911	0.0161
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	132253571	132253917	2	-1.8374
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	132262841	132861847	513	0.012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	132862692	132863812	2	-1.814
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	132864357	140058573	3310	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	405240	18405648	12696	-0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	18406030	18406767	2	-1.4489
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	18407582	23138098	3212	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	23139429	23139948	2	-1.6353
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	23140293	32980398	6608	-0.005
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	32980984	32983315	2	-1.5199
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	32984002	44762320	5182	0.0067
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	44763010	44763533	3	-1.3164
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	44766797	88040576	23726	0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	88041083	88041447	3	-1.3928
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	88041499	135075077	29308	-7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	446120	12901825	7487	-0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	12902741	12902779	3	-1.2825
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	12903278	32456076	13013	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	32458956	32460507	3	-1.5776
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	32461118	59616207	12123	0.008
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	59619829	59620267	2	1.7636
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	59621085	126440487	39743	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	126441644	126441766	3	-1.3865
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	126443546	133647740	4770	0.0113
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	12	760163	32078493	18667	0
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	12	32078619	32080032	2	-1.6375
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	12	32082000	131671419	55159	0.0036
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	13	18348806	114005560	56601	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	14	19571208	105059083	49357	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	15	21238778	99701830	44442	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	16	593460	85310476	39755	0.006
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	16	85310557	85310571	2	-2.0152
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	16	85311523	87907437	1013	-0.0136
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	17	933971	9563269	4297	0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	17	9565517	9566480	2	-1.6566
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	17	9569299	78510305	32549	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	319586	44737752	25218	0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	44743251	44745886	3	-1.3871
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	44749296	70071946	14058	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	70075653	70075799	3	1.1571
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	70079609	75210228	3343	0.0048
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	19	235018	63570038	23843	0.0101
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	20	403764	61690281	37197	0.0046
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	21	14269492	46503202	20540	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	22	15803930	47717016	16916	-0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	X	3167107	50600232	21197	0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	X	50600495	50604391	2	1.9139
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	X	50604396	154558783	42444	2e-04
