Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	3218610	3770929	293	0.0129
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	3771348	3771403	2	-2.3912
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	3772359	207948307	102753	8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	207951721	207952657	2	-1.9171
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	207955050	216181480	5768	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	216181585	216185483	2	1.5101
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	216187482	216657848	282	0.0367
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	216666358	216666721	2	-2.0008
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	1	216666864	247813706	19806	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	2	484222	242476062	131103	-0.0058
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	2212571	30191123	16526	0.0052
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30192544	30192565	2	-1.6011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30192777	30897243	517	0.0138
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30903743	30904292	5	-0.9564
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	30904759	36592132	3428	-3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	36592372	36592962	4	-1.2544
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	3	36593471	197538677	85846	0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	4	1053934	188763651	102723	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	5	914233	180360469	100464	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	1014281	11983915	7818	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	11984042	11985333	2	-2.6841
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	11986572	16022091	2805	-0.0085
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	16023910	16033065	10	-1.1984
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	16035327	36086152	10150	-6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	36087881	36091363	4	-1.7076
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	36094507	71070849	17881	0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	71074248	71075146	4	-1.2639
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	6	71075888	170903919	57785	-0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	705284	31107586	16792	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	31108896	31112118	6	-0.8925
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	31116168	115460350	41552	0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	115462450	115464467	4	-1.2946
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	7	115465720	158385118	22928	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	8	617667	145232496	81498	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	789932	105118621	45882	0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	105122034	105129994	12	0.674
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	105131391	129206244	16279	0.0039
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	129206409	129213104	2	1.4481
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	129216366	133263109	1911	0.0161
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	133263750	133264096	2	-1.8374
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	133273020	133872026	513	0.012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	133872871	133873991	2	-1.814
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	9	133874536	140938752	3310	-0.0013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	415240	18365642	12696	-0.0027
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	18366024	18366761	2	-1.4489
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	18367576	23098092	3212	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	23099423	23099942	2	-1.6353
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	23100287	32940392	6608	-0.005
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	32940978	32943309	2	-1.5199
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	32943996	45442314	5182	0.0067
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	45443004	45443527	3	-1.3164
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	45446791	88050596	23727	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	88051103	88051467	3	-1.3928
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	10	88051519	135225087	29305	-6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	456120	12945249	7486	-0.0035
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	12946165	12946203	3	-1.2825
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	12946702	32499500	13011	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	32502380	32503931	3	-1.5776
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	32504542	59859631	12122	0.0081
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	59863253	59863691	2	1.7636
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	59864509	126935277	39737	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	126936434	126936556	3	-1.3865
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	11	126938336	134142530	4770	0.0113
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	12	889902	32187226	18664	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	12	32187352	32188765	2	-1.6375
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	12	32190733	133161346	55157	0.0036
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	13	19450806	114987458	56597	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	14	20501368	105988038	49355	0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	15	23687685	101884307	44440	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	16	653459	86752975	39689	0.0061
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	16	86753056	86753070	2	-2.0152
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	16	86754022	89379936	1013	-0.0136
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	17	987221	9622544	4297	0.0038
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	17	9624792	9625755	2	-1.6566
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	17	9628574	80917016	32549	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	329586	46483754	25218	0.0031
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	46489253	46491888	3	-1.3871
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	46495298	71920966	14055	-8e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	71924673	71924819	3	1.1571
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	18	71928629	77109240	3343	0.0048
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	19	284018	58878226	23843	0.0101
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	20	455764	62219837	37200	0.0046
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	21	15347621	47678774	20539	-0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	22	17423930	49331012	16915	-0.0034
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	X	3157107	50583492	21198	0.003
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	X	50583755	50587651	2	1.9139
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_G05_584662	X	50587656	154905589	42460	1e-04
