Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	3208470	208954608	105284	9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	208954936	208957249	2	-2.4327
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	208958940	219651901	7113	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	219654073	219654638	2	-2.2493
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	219656623	224925042	3058	-0.0168
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	224925495	224930650	3	1.4475
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	224931148	245880329	13396	-0.0015
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	2	474222	23842879	15075	-0.0099
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	2	23843397	23843923	2	-2.0862
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	2	23847029	242124735	116031	-0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	526235	121624533	65810	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	121628229	121628235	2	-2.1437
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	121628337	157831116	19687	-7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	157831279	157831694	2	-1.7337
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	157833601	179585085	10735	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	179585524	179598546	6	-1.0687
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	179640281	199023074	10089	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	4	1043934	14169583	7985	0.0011
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	4	14171502	14171900	2	-2.0741
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	4	14172329	189836143	94721	0.0023
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	5	967233	180293075	100455	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	959281	89167743	48675	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	89167857	89168129	2	1.8682
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	89171203	129734400	22839	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	129741161	129741510	3	-1.4131
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	129742691	130734491	724	-0.0174
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	130735334	130736032	2	2.6839
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	130738428	148888698	11270	-0.0152
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	148891122	148894084	6	-1.0702
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	148894347	170745844	12919	-0.0052
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	7	671810	23799198	12043	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	7	23799664	23799749	2	2.2013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	7	23806540	158077879	69232	-1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	8	607667	145304484	81481	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	9	779932	140058573	67906	0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	405240	111997701	65536	-0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	112000820	112001474	3	-1.8749
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	112002242	131236454	13892	-0.0063
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	131239115	131239246	2	1.6748
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	131239802	135075077	1305	-0.0084
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	11	446120	102670079	56625	0.0047
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	11	102672402	102672898	2	-1.985
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	11	102673452	133647740	20522	-0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	12	760163	131671419	73826	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	13	18348806	114005560	56584	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	14	19571208	46702666	13727	0.0077
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	14	46704517	46704593	2	-2.0462
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	14	46705418	105059083	35628	1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	15	21238778	99701830	44440	-0.0036
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	593460	1309731	104	0.0827
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	1313400	1366588	11	0.7553
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	1372013	73718806	30961	0.0024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	73721718	73725080	2	-2.1018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	73727849	87907437	9680	0.002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	17	933971	78510305	36850	0.0098
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	319586	36368900	19955	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	36371447	36373209	3	-2.3653
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	36377269	74549027	22296	-0.0051
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	74554479	74584726	18	-0.5522
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	74584837	75210228	348	0.005
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	19	235018	63570038	23850	0.0108
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	20	403764	61690281	37200	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	21	14269492	46503202	20537	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	22	15803930	47717016	16916	0.0075
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	X	3167107	154558783	63506	0.0084
