Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	3218610	210887985	105343	9e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	210888313	210890626	2	-2.4327
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	210892317	221585278	7113	0.0019
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	221587450	221588015	2	-2.2493
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	221590000	226858419	3057	-0.0167
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	226858872	226864027	3	1.4475
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	1	226864525	247813706	13394	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	2	484222	23989375	15073	-0.0099
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	2	23989893	23990419	2	-2.0862
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	2	23993525	242476062	116025	-0.0059
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	2212571	120141843	65805	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	120145539	120145545	2	-2.1437
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	120145647	156348422	19687	-7e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	156348585	156349000	2	-1.7337
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	156350907	178102391	10734	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	178102830	178115852	6	-1.0687
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	3	178157587	197538677	10089	-5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	4	1053934	14560485	7985	0.0012
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	4	14562404	14562802	2	-2.0741
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	4	14563231	188763651	94726	0.0023
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	5	914233	180360469	100455	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	1014281	89111024	48677	5e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	89111138	89111410	2	1.8682
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	89114484	129692707	22844	0.0018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	129699468	129699817	3	-1.4131
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	129700998	130692798	724	-0.0174
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	130693641	130694339	2	2.6839
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	130696735	148847005	11272	-0.0152
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	148849429	148852391	6	-1.0702
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	6	148852654	170903919	12919	-0.0052
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	7	705284	23832673	12045	0.0041
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	7	23833139	23833224	2	2.2013
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	7	23840015	158385118	69231	-1e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	8	617667	145232496	81488	6e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	9	789932	140938752	67918	0.0021
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	415240	112007711	65534	-0.0025
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	112010830	112011484	3	-1.8749
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	112012252	131346464	13892	-0.0063
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	131349125	131349256	2	1.6748
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	10	131349812	135225087	1305	-0.0084
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	11	456120	103164869	56617	0.0047
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	11	103167192	103167688	2	-1.985
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	11	103168242	134142530	20520	-0.0017
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	12	889902	133161346	73821	4e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	13	19450806	114987458	56580	-0.0014
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	14	20501368	47632916	13727	0.0077
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	14	47634767	47634843	2	-2.0462
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	14	47635668	105988038	35626	2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	15	23687685	101884307	44438	-0.0037
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	653459	1369730	104	0.0827
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	1373399	1426587	11	0.7553
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	1432012	75161305	30895	0.0024
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	75164217	75167579	2	-2.1018
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	16	75170348	89379936	9680	0.002
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	17	987221	80917016	36850	0.0098
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	329586	38114902	19955	-2e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	38117449	38119211	3	-2.3653
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	38123271	76448039	22293	-0.0051
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	76453491	76483738	18	-0.5522
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	18	76483849	77109240	348	0.005
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	19	284018	58878226	23850	0.0108
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	20	455764	62219837	37203	0.001
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	21	15347621	47678774	20536	3e-04
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	22	17423930	49331012	16915	0.0074
ROOTY_p_TCGAb27and38_SNP_N_GenomeWideSNP_6_H03_584556	X	3157107	154905589	63523	0.0085
