Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	51598	11732432	5434	-0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	11737218	11757041	11	-2.4331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	11757641	72541504	34409	-0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	72541524	72583736	45	-1.316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	72584492	86492695	8691	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	86493382	86493972	3	-3.1166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	86494946	94342771	4624	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	94342806	94344858	2	-5.2119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	94346107	165882542	28363	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	165883462	165888494	4	-4.7611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	165888524	167482735	1134	-0.0251
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	167500598	167505369	6	-4.2652
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	167508390	201800994	21381	0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	201805109	201805989	2	-4.2071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	201806910	210701181	5622	-0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	210701206	210705348	3	-4.6195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	1	210707278	247191011	23815	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	2784	3182004	2084	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	3182859	3183210	2	-5.8635
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	3183231	29918939	17594	-0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	29919996	29921620	2	-5.3082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	29921792	30798614	555	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	30798775	30808125	3	-2.8689
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	30808590	34576531	2333	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	34576594	34590667	13	1.3377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	34591060	35829477	834	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	35831294	35841420	6	-2.6252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	35841451	52607972	11368	0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	52607984	52635046	39	-2.8205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	52641453	69902038	10771	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	69908546	69908675	2	-4.2274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	69909986	127361881	28889	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	127363545	127366068	6	-3.2841
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	127366195	146578555	11052	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	146580874	146583404	24	-1.9113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	146594865	159428953	7359	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	159434515	159439712	5	-3.9743
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	2	159441788	242738129	48739	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	35345	4436792	3681	0.0422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	4437544	4437822	2	-3.4945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	4438008	5682140	915	0.0754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	5682288	5684122	2	-3.6621
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	5686881	14542689	6350	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	14543075	14544737	3	-5.1551
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	14544880	25367584	6799	0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	25371764	25371969	3	-3.2452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	25373179	38325098	8345	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	38325138	38325634	5	-3.1171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	38327140	38839941	342	0.0218
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	38840536	38844365	2	3.1192
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	38845179	46701540	4641	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	46705753	46712983	2	-3.4903
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	46716615	46768381	25	-0.176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	46776821	46824593	40	-1.0695
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	46834483	59971986	7021	-0.0146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	59972009	59972152	2	-5.9037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	59976242	96938796	20207	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	96949570	96950800	2	-3.4352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	96951370	109409030	7003	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	109409107	109409208	2	-4.5391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	109413182	135181039	15028	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	135182035	135182189	2	-4.5917
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	135185214	135535067	184	-0.0863
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	135537358	135540340	2	-6.8783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	135541785	158198487	13205	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	158201128	158202860	4	-3.1353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	158208438	163995351	3391	0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	163995433	164109297	71	0.574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	164111308	194356286	18170	0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	194356356	194365597	23	-1.5424
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	3	194369129	199380515	2517	-0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	2281	3439452	1338	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	3441960	3443400	7	-2.9965
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	3443437	34252672	19985	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	34255660	34506399	168	0.5131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	34508213	68927029	18500	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	68937665	68970737	9	-1.7376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	68977394	101724153	18618	0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	101724191	101724471	4	-3.2414
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	101727645	108270949	3667	0.0099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	108285200	108295831	36	-0.7608
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	108295968	154160698	26029	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	154162599	154164432	7	-2.7518
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	154164602	173224503	11676	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	173225723	173226108	12	-2.2996
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	4	173232554	191261904	11479	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	68532	794695	296	-0.06
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	795039	919795	45	0.6985
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	923619	1490998	269	-0.0796
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	1491174	1500841	5	-2.9881
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	1501148	4430176	2348	-0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	4433545	4433725	2	-3.5346
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	4436907	13690836	6981	0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	13692073	13693195	3	-4.1382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	13695773	16098461	1645	-0.0198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	16099278	16107174	4	-2.8381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	16110897	57357403	22329	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	57361784	57369290	32	2.2211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	57374114	71343656	7322	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	71344086	71345625	3	-5.6867
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	71346945	83244529	7138	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	83246442	83246827	2	-4.9005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	83248149	148169619	37936	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	148171591	148171737	2	-4.3364
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	148173136	164366038	10296	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	164367746	164369361	3	-3.8383
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	164373602	171038365	4666	-0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	171039294	171054516	11	-1.5204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	171056040	175054662	2802	0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	175055757	175058093	3	-4.0348
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	5	175062569	180722926	2625	-0.0178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	94661	1290648	1018	-0.0161
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	1291541	1291561	2	-4.6977
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	1292118	5055772	2740	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	5057464	5057575	2	-5.254
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	5057746	15610286	7458	0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	15611554	15613107	3	-3.5533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	15613512	37739520	12866	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	37741002	37741318	4	-3.2095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	37741674	44701094	4247	-0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	44701355	44709340	14	-1.139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	44711250	44903048	126	0.1033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	44904278	44904574	2	-3.9901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	44904634	67064983	10962	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	67065744	67100610	44	-0.8624
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	67100644	71784285	2981	0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	71785587	71785723	2	3.5915
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	71785740	81341435	5925	0.0198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	81341478	81346253	28	-3.2405
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	81351060	109184585	16593	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	109184633	109187100	3	-3.3191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	109187984	166950387	36107	0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	166950567	166952198	4	-4.3723
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	166952315	167474550	362	-0.0483
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	167475145	167475478	2	-4.2068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	6	167478159	170892930	1982	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	52911	38277623	25791	-8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	38277891	38323848	92	-0.8912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	38324937	43240394	3152	0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	43240964	43253418	9	-2.6311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	43253433	66266675	10971	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	66266764	66337219	25	-1.3234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	66337919	149209882	47203	0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	149210282	149210633	3	-3.2511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	149210778	152412201	1629	-0.0247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	152414895	152415484	3	-3.9112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	152417462	158429430	3820	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	158429624	158437903	4	-4.2721
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	7	158438917	158819765	244	-0.0851
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	21254	21301978	18076	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	21303156	21303427	2	-4.5936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	21303574	135696571	66246	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	135696597	135696931	2	-4.4807
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	135697883	140737659	3861	0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	140737742	140740159	5	-2.0871
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	140744219	142653911	1051	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	142655292	142659778	2	-5.3944
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	142664978	145623814	1018	-0.0264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	145636324	145637827	3	-5.1798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	8	145648573	146268959	254	-0.0373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	36587	44569219	29520	0.0159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	44667855	44777523	33	-1.191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	44780914	89201343	13378	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	89203492	89206593	3	-4.0958
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	89208185	111144660	14492	0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	111147115	111152018	4	-2.8725
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	111152455	114207078	2214	0.0285
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	114210094	114210883	2	3.1252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	114212395	115361171	723	0.0522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	115361516	115368771	5	-3.3385
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	9	115369670	140211215	14402	-0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	62809	2345489	1628	-0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	2347121	2350003	5	-3.6416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	2350250	4280814	1680	-0.0228
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	4280838	4281016	3	3.1567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	4284071	5744157	1127	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	5748902	5749294	2	-4.8696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	5750987	18282310	9373	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	18282641	18288142	4	-4.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	18291613	26227929	5297	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	26230528	26233584	5	-3.3414
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	26233749	108705413	48066	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	108706003	108708373	2	-5.8277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	10	108708728	135356694	17977	-9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	11	188572	134449982	81597	0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	20703	2089455	1164	0.0454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	2092811	2164580	82	-0.5593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	2165339	2408810	189	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	2409202	2409568	2	-3.9721
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	2411269	4177522	1177	-0.0382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	4178283	4179397	2	-5.2992
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	12	4180539	132288262	77267	0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	17924949	19835187	934	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	19835911	19836223	2	-5.9658
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	19837005	22537880	1771	0.0299
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	22537900	22538863	2	-5.8514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	22539168	35284836	8785	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	35287058	35287317	2	-4.3669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	35288222	110934168	47686	-9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	110934706	110936002	3	-3.5996
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	13	110937398	114126499	1359	-0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	14	18072124	21642343	1594	-0.0442
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	14	21642658	22029777	296	-0.7041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	14	22029814	22894376	452	-0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	14	22895553	22911017	9	-3.3594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	14	22912579	106356482	49785	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	18276341	18714273	69	0.1136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	18728578	20088838	349	-0.7512
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	20224763	32773035	7124	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	32773276	32773368	2	-5.1698
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	32774556	83278434	29258	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	83279700	83279922	2	-6.0883
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	83280975	96051503	9003	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	96053529	96053778	2	-5.6203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	15	96054222	100286563	2880	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	777	8548538	5664	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	8549970	8549992	2	-4.7798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	8550622	12517946	2889	0.0237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	12518398	12518542	2	-4.364
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	12518874	14956361	1658	0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	14956404	15023758	60	-0.7081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	15032942	22538975	3473	0.0281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	22541783	22581785	21	-1.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	22583494	25864239	2101	0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	25864405	25865741	2	-5.2826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	25869582	32496123	2827	-0.0238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	32496402	32496410	5	-3.5362
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	32516775	54352549	6788	-0.0244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	54353890	54379945	20	-1.4454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	54387058	81049285	17755	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	81049911	81051133	3	-4.3713
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	81051247	84795443	3339	-0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	84795672	84805636	5	-3.4472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	16	84805888	88815036	2237	-0.0597
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	526	9800269	5217	0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	9800824	9801736	2	-5.3922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	9802586	36675234	14270	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	36676540	36683976	23	1.3554
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	36684057	41719947	2460	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	41750187	42107479	48	1.0788
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	17	42120174	78643088	20043	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	1543	44454909	26563	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	44454966	44455050	2	-6.0833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	44457989	49515148	3379	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	49515577	49516443	6	2.0856
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	49517431	55651976	3863	-0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	55654358	55670090	6	-2.823
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	55672442	61872559	4176	0.0164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	61878472	61879320	12	-2.9212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	18	61883718	76115554	9790	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	41910	3394470	827	0.0312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	3396721	3397107	2	-5.4426
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	3402165	6959499	1258	-0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	6962362	6962560	2	-5.0551
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	6962766	34557185	9613	0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	34559636	34561094	3	-4.3194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	34561385	47982613	7367	-0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	47986230	48229218	105	-0.6604
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	48230618	62263780	7144	0.0146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	62263889	62265000	3	-4.5916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	19	62267146	63789666	842	0.0288
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	20	9305	1509580	1100	0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	20	1509667	1541893	40	-1.1528
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	20	1545946	62426597	38361	-0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	21	9758742	42215115	20224	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	21	42217342	42226717	3	-4.2624
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	21	42228532	45084525	1660	-0.0316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	21	45085062	45085818	3	-5.0897
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	21	45087119	46921385	964	-0.0212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	22	14432528	36345799	13789	-0.0159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	22	36358402	36390637	4	-3.4146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	22	36391396	49581321	7897	-0.029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	108477	2788322	154	-0.0647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	2788345	2788433	2	-5.0314
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	2788526	5348399	1766	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	5349241	5349315	2	-5.5199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	5349997	11568023	4400	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	11568641	11569542	2	-5.7696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	11570078	26966510	9342	-0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	26971515	26974067	4	-3.7583
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	26974086	31923869	3068	-0.0478
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	31924153	31924781	3	-5.5744
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	31925029	32944615	806	-0.0621
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	32944903	32944938	2	-5.4825
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	32945852	33954294	667	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	33956474	33980208	22	-5.0472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	33983346	35421835	851	-0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	35424233	35424389	2	-5.8833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	35428526	134574568	47558	-0.0244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	134576271	134577092	3	-5.1699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	X	134581585	154835548	11869	-0.039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	Y	2710438	14610661	3742	-0.9618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	Y	14612451	14801445	114	-0.1828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A07_228786	Y	14807705	57427647	4669	-0.9656
