Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	51598	37952872	19234	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	37961428	37969428	5	-4.3611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	37972420	41170346	1638	0.0163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	41170682	41171026	2	-3.858
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	41171169	72541504	19178	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	72541524	72575092	30	1.1524
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	72577166	114554533	25635	0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	114554606	114557312	3	-3.8378
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	114560613	150822151	6443	0.0299
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	150822330	150846449	28	-1.9128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	150852342	167482735	10853	0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	167500598	167508390	7	-3.2997
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	167509025	178341129	6688	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	178346913	178346936	2	-3.9036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	178355384	201404104	14471	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	201405399	201405593	2	-4.0833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	1	201410018	247191011	29788	0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	2784	30799400	20331	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	30808125	30808967	3	-3.6532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	30811184	34544573	2307	0.0287
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	34554898	34590561	45	0.7176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	34590667	36559251	1464	0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	36559793	36559925	2	-3.9016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	36560015	106248065	38952	0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	106249661	106254751	13	-2.824
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	106257575	127574233	11779	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	127574416	127578376	4	-3.0245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	127578739	128993864	719	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	128994283	128997110	3	-4.1587
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	128998021	146578555	10230	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	146580874	146583404	24	1.1411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	146594865	156472985	5731	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	156474113	156474465	2	-2.6809
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	156475079	162053439	3271	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	162053512	162058996	2	-2.4144
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	162059150	178805478	9850	0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	178805729	178805866	2	-4.9446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	178808857	199002588	11251	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	199007099	199007323	2	-5.3765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	199011093	239525524	24464	0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	239528796	239530073	3	-4.2263
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	2	239530402	242738129	1622	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	35345	26401195	18638	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	26409128	26414347	5	-2.9015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	26420977	38321783	7553	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	38322855	38325138	5	-3.6435
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	38325230	53700611	7893	0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	53702255	53705813	4	-2.475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	53706449	60334281	4601	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	60334358	60339086	2	-3.1464
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	60339578	64048145	2973	0.0357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	64053049	64057043	2	-5.2089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	64058095	189391832	70741	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	189391904	189392447	2	-4.416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	189393504	194356501	3375	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	194357441	194365597	21	-1.5687
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	194369129	198661128	2183	0.0352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	198661843	198662267	2	-3.2912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	3	198669994	199380515	340	-0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	2281	4918223	2093	0.033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	4918723	4931498	2	-5.5391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	4934147	8651822	2598	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	8654526	8655763	3	-3.0236
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	8656980	9819488	630	0.0198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	9823258	9840596	29	1.8807
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	9843312	9953722	134	-0.1051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	9955343	9955648	2	-5.3009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	9956054	9999813	31	-0.1112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	10002252	10009766	15	-1.8501
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	10011816	15769764	4298	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	15770235	15770773	3	-3.4644
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	15771100	64376535	27476	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	64380064	64390853	29	-1.8321
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	64399026	89957192	14729	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	89958502	89959101	3	-3.3414
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	89961787	103326019	7606	0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	103330732	103330784	2	-4.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	103334008	133741327	17202	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	133746012	133746496	3	-3.1366
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	133751062	161260754	15960	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	161272224	161290239	37	-0.759
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	161303320	172605921	6939	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	172611459	172614285	10	2.6944
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	4	172614299	191261904	11867	0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	5	68532	180722926	107038	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	94661	32539270	21366	0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	32539530	32638122	28	1.0741
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	32638276	41596913	5435	0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	41597353	41608470	12	-1.6201
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	41608747	54039026	7495	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	54039043	54039814	8	1.992
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	54043307	71783260	8257	0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	71783440	71785740	5	-3.2552
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	71789723	72919646	762	-0.0222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	72923245	72923593	2	-3.1106
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	72925284	77493251	2736	0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	77496587	77509392	19	-3.7154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	77509408	78962946	886	-0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	78963231	78968565	3	-3.5937
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	78968981	159667120	49120	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	159668234	159668558	2	-5.1785
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	159668586	168270868	5980	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	168277753	168278364	4	-3.4139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	6	168280336	170892930	1614	0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	52911	47545539	31751	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	47545556	47554402	3	-3.1877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	47554686	48471468	542	-0.028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	48472098	48472314	2	-5.1012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	48473218	48892774	260	0.034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	48896149	48896760	3	-4.1841
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	48899553	54347867	3844	-0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	54353999	54354011	6	-2.3651
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	54360982	142154515	46875	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	142156294	142165614	27	-2.4418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	7	142165684	158819765	9892	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	21254	23814063	19551	0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	23815113	23815200	2	-4.7469
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	23815705	106008138	45888	0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	106009371	106012471	2	-3.6003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	106014188	108356267	1470	0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	108356618	108356928	4	-1.6381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	108357525	112363846	2228	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	112364214	112364436	5	-2.3844
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	112370428	134585103	14435	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	134591070	134594021	7	-2.8416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	8	134594066	146268959	7165	0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	36587	4625525	4469	0.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	4626840	4626900	2	-4.2395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	4629853	23351805	14730	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	23353115	23363484	8	-2.9644
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	23368488	43412533	10290	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	43445848	44840522	124	-0.6802
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	44846127	89203492	13393	0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	89206533	89206593	2	-4.2831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	89208185	99183520	6318	0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	99184248	99201578	12	-1.4302
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	9	99202238	140211215	25711	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	62809	2345384	1630	0.0528
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	2345489	2347570	4	-3.638
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	2347702	2763778	378	0.0461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	2770813	2771300	2	-6.4887
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	2771386	4655668	1717	0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	4658586	4661536	2	-4.8836
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	4662037	44775969	25491	0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	44779928	44781120	2	-5.9771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	44782225	72425129	16406	0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	72425160	72426336	2	-4.3687
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	72427439	82023663	5399	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	82024242	82025745	2	-4.0635
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	82026543	92901481	7393	0.0114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	92904402	92905864	2	-4.7025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	92907248	121229487	17362	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	121229564	121230243	2	-5.4975
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	121233404	134538773	9436	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	134555103	134641725	44	0.8456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	10	134642270	135356694	266	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	188572	4229734	1634	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	4232580	4232709	2	-5.924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	4252332	55249539	31094	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	55252198	55253629	6	-3.3152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	55258372	55426966	112	0.0797
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	55432601	55432875	2	-4.1889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	55433475	61656358	3478	-0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	61662950	61670086	3	-2.5828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	61672277	69248893	3143	-0.0242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	69249908	69250171	2	-4.7847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	69252264	101099594	20125	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	101103070	101103174	4	2.6492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	101103422	114929086	8776	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	114930395	114932144	2	-4.1696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	114932518	117459594	1689	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	117460360	117460969	2	-5.4901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	117461473	130197158	8644	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	130197591	130197748	2	-4.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	130199397	130626069	384	0.0492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	130626653	130626725	2	-5.6977
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	130637908	134366753	2744	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	134367406	134367615	2	-6.0573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	11	134375360	134449982	49	-0.0767
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	20703	2118442	1182	0.0593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	2120921	2128284	36	-0.7061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	2128365	3572480	964	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	3573464	3573761	2	-3.8731
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	3576024	39484052	21853	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	39484411	39485195	3	-3.4415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	39488460	68708747	16942	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	68710036	68716223	2	-4.7274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	68716648	69864532	748	-0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	69868655	69875488	4	-2.9843
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	69875513	95640213	15413	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	95641364	95652776	3	-3.6844
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	95652976	126905249	19443	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	126905501	126906223	2	-4.3493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	12	126909155	132288262	3587	0.0221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	13	17924949	94785019	47939	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	13	94785359	94790710	4	-3.9935
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	13	94791351	100596097	3461	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	13	100600101	100601462	2	-3.2936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	13	100601973	114126499	9331	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	18072124	24280777	3146	-0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	24281061	24282744	3	-3.3971
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	24283213	44251898	11926	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	44252396	44293463	31	-0.8701
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	44296609	46487743	1145	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	46487788	46487865	2	-5.9975
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	46488018	62847006	10078	0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	62847659	62849856	4	-5.3278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	62850213	90327627	16789	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	90328786	90332912	2	-4.7199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	14	90334473	106356482	9222	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	18276341	88692775	40604	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	88692986	88696269	2	4.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	88696363	89889193	765	0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	89889998	89890222	2	-4.9951
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	89895733	99507842	7015	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	99508971	99516298	6	-2.9603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	15	99516499	100286563	503	0.0506
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	777	8548538	5699	0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	8549970	8549992	2	-4.9477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	8550622	9002168	302	0.0352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	9005026	9008750	4	-3.0271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	9009087	12062376	2255	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	12065401	12065598	2	-4.7664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	12066326	55272021	17886	0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	55276243	55279371	2	-4.8044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	55280073	57018477	959	-0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	57020498	57020669	2	-4.2119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	57021841	64852313	5170	0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	64852680	64858806	5	-3.8648
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	64859874	81727918	11937	0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	81728583	81733312	9	-2.873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	81736650	85079214	2936	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	85079748	85079938	2	-6.085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	16	85080374	88815036	1893	0.0336
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	526	15343810	9261	0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	15345712	15352763	3	-4.2572
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	15353534	18299671	1346	-0.022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	18299674	18405946	27	-1.4396
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	18409922	19583544	456	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	19583608	19585473	2	-3.3217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	19586493	27138441	3156	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	27138976	27139087	2	-3.0693
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	27139332	36675234	5366	0.0182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	36676540	36684057	24	-0.8311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	36686250	37039941	285	0.0754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	37040391	37042201	2	-3.0995
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	37042238	37699948	277	0.0323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	37700927	37703261	3	-1.9641
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	37704368	39184644	702	0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	39186589	39200761	5	-3.4102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	39201530	41564110	1101	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	41564451	41719947	89	-0.5556
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	41750187	42107479	48	0.7916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	42120174	45997593	1888	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	45998714	45999536	2	-5.1351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	46003860	46870751	414	0.0315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	46871428	46872880	3	-4.7093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	46874350	51519360	3195	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	51519879	51527590	17	-1.2921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	51527822	52594471	770	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	52597241	52598120	3	-2.4582
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	52603340	53477342	609	0.0146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	53480273	53486754	2	-5.5411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	17	53489452	78643088	13241	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	18	1543	6076758	4076	0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	18	6076900	6078451	3	-3.9485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	18	6078790	34317099	16133	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	18	34317762	34317863	2	-5.6087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	18	34319854	76115554	27697	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	19	41910	20375423	8268	4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	19	20379989	20551698	100	-0.5956
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	19	20557364	63789666	18977	0.0207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	9305	1518737	1119	0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	1518752	1541893	32	1.5474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	1545946	4641113	2050	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	4642063	4642208	2	-5.7936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	4642221	22908446	13555	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	22909029	22910231	2	-4.8322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	22912377	46024993	12012	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	46025255	46025899	2	-4.2826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	20	46034026	62426597	10972	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	21	9758742	45199001	22054	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	21	45200111	45200232	2	-4.4682
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	21	45200956	46921385	910	0.0254
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	14432528	33667956	12209	0.0192
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	33668995	33669359	2	-4.8276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	33672654	35911329	1437	0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	35911368	35911623	2	-4.6433
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	35911715	37620866	780	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	37625201	37626850	3	-3.8098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	37629060	42825060	2824	0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	42825156	42826862	4	-4.3889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	42830976	42869703	46	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	42870021	42872531	4	-1.9995
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	42873193	46120122	2095	-0.0242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	46127905	46130946	3	-4.3877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	22	46130986	49581321	2437	0.0252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	X	108477	16255578	9571	-0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	X	16257818	16261840	9	-5.5255
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	X	16261920	135028698	59645	-0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	X	135028713	135028822	3	-5.0665
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	X	135031039	154835548	11685	-0.0269
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	Y	2710438	15785700	4371	-0.8606
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	Y	15795682	15799482	2	-3.5869
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B01_228692	Y	15799739	57427647	4154	-0.8899
