Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	51598	2259808	399	-0.1092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	2261924	2273173	6	-3.245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	2273983	28141293	13567	-0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	28142633	28143324	2	-5.7249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	28145603	30344687	1051	-0.0389
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	30346745	30351181	2	-5.1621
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	30351205	30842741	385	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	30842773	30843052	2	-3.4354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	30843796	35018539	2214	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	35024256	35033819	6	-2.6138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	35035097	37952872	1463	-0.0325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	37961428	37961729	2	-4.2054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	37961794	72535958	20732	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	72541006	72583736	48	-1.3591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	72584492	207865447	68008	-0.0209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	207865828	207865876	2	-5.8758
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	207866455	210701181	1771	-0.0159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	210701206	210705348	3	-4.6167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	210707278	233075659	14431	-0.0272
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	233078153	233080658	2	-6.1313
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	233081267	233142552	54	-0.1425
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	233145561	233145580	2	4.7041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	1	233146489	247191011	9252	-0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	2784	23092900	16010	-0.0327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	23093576	23096366	3	-4.061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	23096431	38658730	9475	-0.0271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	38659100	38660153	2	-5.2348
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	38660681	42932726	2912	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	42933462	42937530	2	-3.076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	42938324	43300857	242	-0.0473
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	43301099	43301270	2	-3.3597
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	43302118	47584000	2902	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	47584025	47591219	8	-4.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	47592047	52508761	3112	-0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	52509436	52513378	4	-3.6267
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	52513867	138272413	45945	-0.0192
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	138273844	138276574	2	-5.4274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	138276762	140461796	1283	0.031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	140465912	140466438	2	-6.3418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	140466660	168863439	16336	-0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	168865153	168865167	2	-4.5509
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	168866243	174236401	3356	-0.0153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	174236611	174237283	2	-3.7084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	174240099	194671485	11598	-0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	194675640	194676103	2	-3.3162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	194676296	199002588	2363	-0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	199007099	199007323	2	-5.4869
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	199011093	235603429	21992	-0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	235603715	235604855	2	-6.2826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	235607392	240835864	3206	-0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	240840098	240842567	6	-2.9659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	240842754	240880662	28	-0.0566
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	240881427	240888452	6	-2.68
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	2	240889705	242738129	776	0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	35345	14589248	10994	-0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	14589760	14592929	4	-4.0729
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	14594254	24007826	5698	-0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	24007972	24028368	7	-3.2208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	24028796	84184912	37362	-0.0154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	84188123	84188856	2	-3.9829
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	84193657	97511312	4579	-0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	97511398	97511676	2	-3.0691
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	97513849	100420474	1513	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	100427148	100432111	38	-3.1678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	100433654	198148556	57149	-0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	198150195	198150456	2	-6.5199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	3	198159146	199380515	592	0.0818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	2281	936453	379	0.0253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	936974	946047	2	-5.3586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	954359	2703746	610	-0.0801
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	2703973	2714087	6	-4.7083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	2714319	4871714	1063	-0.0362
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	4872994	4873210	2	-6.7381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	4875052	5803667	723	-0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	5803703	5805951	7	-3.0296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	5806274	6117169	241	0.0234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	6118753	6119396	3	-4.7415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	6119776	9819488	2243	-0.0666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	9832514	9840596	28	-2.4162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	9843312	9930061	117	-0.1267
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	9933258	9933459	2	-3.1248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	9938968	14706665	3590	-0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	14710727	14710968	2	-4.0445
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	14711014	172605921	90499	-0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	172611459	172614285	10	2.3913
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	172614299	187857638	9734	-0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	187858275	187859144	3	-4.611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	4	187861188	191261904	2091	0.0192
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	68532	1059073	401	-0.0445
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	1064149	1072814	5	-3.8599
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	1073354	1883405	420	0.0316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	1883977	1891383	5	-2.9586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	1891481	12844720	8658	-0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	12868780	12873076	9	-2.1284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	12877411	166874904	88741	-0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	166875850	167152672	203	-0.569
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	167156698	178466579	7064	-0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	178467057	178741624	155	-0.8156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	5	178742108	180722926	1004	-0.0693
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	94661	14811202	10703	-0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	14812189	14812672	4	-4.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	14814029	41880812	16162	-0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	41881300	41881713	2	-4.41
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	41882708	103841522	34824	-0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	103844669	103868754	45	0.9223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	103872163	121705198	10435	-0.0266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	121705274	121706478	2	-6.275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	121706691	149407421	17048	-0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	149407757	149411851	2	-5.1742
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	149412075	170383666	13920	-0.0142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	170389382	170389549	2	-5.0875
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	170389880	170430395	23	-0.4389
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	170431728	170432028	3	-3.1662
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	6	170432400	170892930	203	-0.0619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	52911	3322875	1233	0.2726
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	3322888	3325052	2	-3.1828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	3326017	4006092	568	0.3914
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	4006118	4006655	2	-4.6208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	4016238	8918368	2984	0.3647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	8918976	8991389	80	-0.8631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	8993306	19644072	8273	0.3928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	19644994	19648673	3	-2.4134
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	19649202	48471468	19149	0.3796
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	48472098	48472314	2	-2.9661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	48473218	50734566	1545	0.3339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	50735581	50735647	2	-3.3782
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	50735830	54347867	2558	0.3684
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	54353999	54354011	6	-2.4688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	54360982	56728994	1493	0.3713
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	56729607	56736308	3	-2.8142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	56739660	125831494	35543	0.3711
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	125831723	125831770	3	-1.7183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	125832159	125833386	8	-0.0246
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	125833403	125833851	5	-1.7297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	125834112	154654253	17315	0.3652
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	154657740	154658597	3	-4.4793
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	7	154660844	158819765	2382	0.3469
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	21254	3617883	2961	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	3618310	3618656	2	-3.1683
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	3618722	3628802	13	0.0736
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	3630895	3631136	3	-4.5943
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	3632093	10391620	6409	-0.0236
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	10392712	10393121	3	-4.6138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	10394904	11729348	931	-0.0402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	11730047	11732013	3	-4.7146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	11735746	144735462	79556	-0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	144736712	144738038	2	-5.571
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	8	144744865	146268959	480	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	36587	13520105	11601	0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	13520487	13520515	2	-5.8324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	13520711	21926239	6641	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	21934287	22078260	113	-0.6041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	22079599	22210791	90	0.0439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	22217268	23659526	920	-0.595
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	23662465	23732534	64	-1.8518
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	23735602	23827464	85	-0.5751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	23837450	23862550	16	-1.6675
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	23864047	24112799	126	-0.4934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	24114296	24430952	180	-1.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	24432008	24510084	84	-0.5929
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	24518024	24529144	12	-1.9093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	24529902	27485418	2044	-0.5798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	27485920	27733004	174	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	27738132	27800414	51	-0.5559
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	27800526	29950036	1589	0.013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	29950458	29960411	9	-1.4257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	29962111	31098602	737	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	31099267	31146024	39	-0.5552
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	31162350	31637295	308	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	31639992	31799456	97	-0.602
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	31799518	34409752	1674	-0.033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	34411591	34412185	3	3.067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	34413806	38129969	2016	-0.0144
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	38130632	38130772	2	-5.7402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	38131369	38695290	453	0.0354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	38696453	38697326	3	-2.0565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	38698586	44667855	329	0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	44669747	44780914	33	-1.4319
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	44795733	82161248	8608	-0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	82161647	82161713	2	-4.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	82161882	84470818	1474	-0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	84471228	84473930	3	-3.3244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	84475075	91478271	4738	-0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	91479874	91480781	2	-4.5579
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	91481786	99573287	5005	-0.025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	99573968	99575138	3	-4.1853
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	99577584	105606318	3903	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	105608517	105609111	2	-4.4206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	105610523	115609353	7201	0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	115610181	115612902	2	-3.6091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	115617139	115784777	121	-0.0646
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	115785097	115789351	2	-2.9446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	115791029	126688003	7501	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	126688749	126692920	5	-2.6305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	126696255	134396315	4113	-0.0486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	134399873	134725686	204	-0.6742
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	9	134726909	140211215	2348	-0.1233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	62809	13912176	10692	-0.619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	13914276	13915596	4	-5.694
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	13915726	14324225	368	-0.6059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	14324451	14324572	3	-4.7602
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	14324599	16840124	1855	-0.6036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	16843953	16847751	4	-4.3256
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	16849307	17570519	566	-0.5801
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	17573291	17574164	2	-6.3048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	17575716	18490806	333	-0.6135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	18491386	18491842	2	-6.4194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	18491890	18510159	21	-1.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	18510335	18510399	2	-6.6603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	18510929	30530088	8075	-0.5781
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	30536131	30536549	3	-6.3662
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	30537274	42774546	5517	-0.5838
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	42775345	42776065	2	-6.5123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	42776574	46351595	1824	-0.5911
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	46352201	47241036	350	0.1653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	47417400	124446564	47719	-0.5776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	124446757	124447896	3	-6.4013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	10	124449238	135356694	7130	-0.6168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	188572	78197271	43761	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	78201236	78209174	4	-4.2959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	78209718	101099594	15585	-0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	101103070	101103174	4	2.8095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	101103422	130623828	19404	-0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	130625968	130626725	4	-3.6277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	11	130637908	134449982	2782	-0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	20703	9521823	5771	0.3574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	9525137	9619559	23	-1.7124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	9626236	10471727	597	0.339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	10474634	10487073	5	-2.0247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	10487987	13261503	1877	0.3552
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	13262130	13262228	2	-3.2603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	13262778	23059284	6190	0.3642
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	23062282	23062430	2	-3.8595
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	23066128	56164997	18745	0.3645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	56172876	56178071	2	-3.8908
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	56190698	80242447	14686	0.354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	80245371	80246639	2	-4.117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	80247740	112556200	19631	0.3593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	112559169	112568155	7	-1.8525
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	12	112568216	132288262	12617	0.3513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	17924949	30809945	8541	-0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	30819922	30822703	3	-3.6727
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	30822893	32658737	1276	-0.0246
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	32659265	32660153	3	-4.5377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	32660325	89276372	34337	-0.0202
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	89278384	89285156	2	-5.8336
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	89289160	97888838	5462	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	97889635	97893120	3	-4.5738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	97895547	109951659	8883	-0.0144
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	109954774	109967959	13	-1.8661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	109969255	110934168	634	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	110934706	110936002	4	-3.8517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	13	110937398	114126499	1362	-0.0645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	18072124	97566626	47753	-0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	97566932	97568704	2	-3.9481
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	97568768	98220111	579	-0.0413
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	98220551	98220564	2	-6.4644
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	98220979	105601409	3404	-0.0402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	105601732	105613322	6	-1.5225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	105618359	105638145	11	-3.0307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	14	105640508	106356482	408	0.0398
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	15	18276341	27199283	4222	-0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	15	27199339	27204828	4	-5.7958
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	15	27209974	100286563	44418	-0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	16	777	76928999	39134	-0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	16	76929109	76943009	21	-2.2484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	16	76943552	86424661	8774	-0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	16	86427880	86441222	6	-4.3589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	16	86442018	88815036	871	-0.0619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	526	9611098	5047	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	9611545	9615268	2	-7.2199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	9615293	18230452	5491	-0.0132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	18230648	18450883	45	0.6916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	18470413	29876222	5578	-0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	29876755	29877936	2	-5.0493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	17	29879236	78643088	25941	-0.0285
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	1543	6076758	4059	-0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	6076900	6078451	3	-4.0458
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	6078790	44132102	22264	-0.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	44140515	44140633	2	-4.3589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	44141178	54239182	6487	-0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	54246632	54247758	2	-5.3696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	54250472	72848999	12973	-0.0148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	72849085	72851811	3	-3.8088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	18	72852096	76115554	1992	-0.0212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	19	41910	54591712	22116	0.3146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	19	54591808	54599067	2	-3.7104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	19	54602922	63789666	5160	0.355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	9305	1508999	1099	0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	1509580	1538534	39	-1.0351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	1541849	1541893	2	-3.5825
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	1545946	1824765	223	-0.0295
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	1827313	1834624	4	-3.9608
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	1834757	7041432	3514	-0.0252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	7051595	8520225	1074	0.4919
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	20	8521294	62426597	33552	-0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	9758742	40217543	18579	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	40218696	40219188	2	-5.4274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	40219743	41442516	1034	-0.0326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	41443581	41446702	4	-3.737
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	41450804	43718956	1614	-0.059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	43722405	43722754	2	-4.2193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	21	43727294	46921385	1631	-0.0561
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	22	14432528	49581321	21708	-0.0254
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	108477	94723294	47543	-0.0187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	94723393	94734305	3	-4.8318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	94734481	97820369	1765	-0.0242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	97820677	97824489	3	-4.3406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	97824692	110247287	6221	-0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	110247902	110253416	3	-4.7268
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	110254821	117363341	3943	-0.0297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	117368062	117368347	2	-5.7548
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	117368396	153616462	20764	-0.0299
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	153616950	153617250	3	-4.7354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	X	153617397	154835548	417	-0.0486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726	Y	2710438	57427647	8523	-1.0049
