Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	51598	18679771	9134	-0.0615
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	18680879	18682483	2	-6.3611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	18684255	20282341	959	-0.0641
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	20283919	20284232	2	-6.3162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	20286826	53896438	17087	-0.0443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	53896461	53902320	6	-3.7516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	53902944	150822151	44255	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	150822330	150853200	34	-1.5828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	150853218	156157150	2802	-0.0297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	156158189	156158221	2	-5.7664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	156158300	194981496	25024	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	194994473	195082414	96	-1.2176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	195083353	201567539	3874	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	201569948	201571302	3	-4.7586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	1	201572715	247191011	29380	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	2784	3130664	2014	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	3131448	3131473	2	-6.1818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	3132045	8790753	4414	0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	8791780	8794022	2	-5.6511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	8795050	10999213	1371	-0.0228
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	11000546	11001423	4	-3.6243
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	11003195	46132455	22595	0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	46134079	46144253	6	-3.1682
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	46148315	103117019	30050	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	103121744	103128654	6	-2.9078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	103128773	128743219	14283	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	128745361	128745577	2	-5.5482
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	128748278	206569694	44509	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	206572119	206573109	2	-5.6818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	206577400	218655639	7349	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	218655760	218661023	4	-4.3765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	218661685	219920909	546	0.0262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	219925668	219930596	5	-4.115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	219933676	233081094	7941	-0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	233088264	233091660	3	-5.6177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	2	233094676	242738129	5681	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	35345	13257578	10112	0.0229
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	13259062	13259218	2	-5.0929
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	13259335	13866274	363	-0.0437
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	13870188	13872407	5	-3.2349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	13872886	68807382	34142	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	68808441	68829136	6	-3.0613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	68829398	103653743	16925	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	103655864	103671859	7	-2.8505
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	103674927	131240523	15895	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	131240908	131288926	56	-1.1914
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	131289614	163973842	19103	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	163974567	164106547	82	0.7953
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	164106575	192268622	16680	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	192268702	192268727	2	-6.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	3	192271810	199380515	3920	-0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	2281	3683063	1445	-0.035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	3683397	3689461	10	-2.2942
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	3692205	7290232	2313	-0.0379
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	7290522	7298230	5	-4.5074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	7298269	9819488	1473	-0.0818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	9832514	9844105	32	-1.7495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	9844264	48784116	24506	-9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	48784131	48985949	19	-1.2593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	48986112	89280330	21461	0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	89282387	89283626	2	-5.6842
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	89285099	173224432	48103	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	173224503	173226108	13	-2.1118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	173232554	182523998	5731	0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	182524264	182527590	3	-4.4745
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	4	182527624	191261904	5663	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	68532	1850018	799	-0.0428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	1851138	1859653	11	-2.0741
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	1861585	57357403	32906	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	57361784	57369290	32	1.7145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	57374114	109789982	28967	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	109791803	109795258	3	-4.7253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	109795634	146261642	21907	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	146261864	146262557	3	-6.9005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	146264294	179478278	20892	-0.0222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	179480185	179488958	2	-5.6001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	5	179489762	180722926	593	0.0166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	94661	822138	582	-0.0413
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	822485	822851	2	-6.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	822878	14923405	10162	-0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	14924490	14925563	2	-5.5597
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	14930593	30045290	9425	-0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	30046756	30067914	10	-2.8246
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	30068015	32924936	1193	0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	32925108	32926969	2	-6.3821
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	32933485	151106882	68399	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	151111272	151112039	2	-5.8418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	151114648	159667463	5501	0.0178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	159668234	159668558	2	-5.4704
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	6	159668678	170892930	7538	0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	52911	984755	215	0.0705
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	1000988	1031246	11	-1.6696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	1032387	4170018	1669	0.0413
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	4170029	4175092	7	-2.8205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	4176780	5548921	680	-0.0552
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	5549466	5549582	4	-5.2304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	5550693	37975712	22819	0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	37975794	37975821	2	-5.4096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	37976001	43129580	3324	0.0248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	43130232	43130792	3	-4.1133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	43131065	57270826	8904	-0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	57275061	57275226	2	-4.7402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	57275591	109221034	25567	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	109224328	109240949	30	-1.1718
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	109240998	109241218	6	-3.2821
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	109241465	133435751	13971	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	133435849	133446174	22	-1.5089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	7	133446205	158819765	15165	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	21254	2309232	1607	-0.0287
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	2310208	2583091	208	0.5561
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	2583818	8537743	6038	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	8537972	8543911	8	-4.803
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	8544624	9064096	411	0.0458
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	9064350	9067513	3	-4.6659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	9071872	112360670	60227	-0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	112363455	112364436	9	2.3095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	112370428	134573109	14267	-0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	134573258	134573424	2	-6.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	134573655	142572775	5780	-0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	142572858	142573179	2	-6.2001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	8	142573208	146268959	1338	-0.108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	36587	17868407	15045	0.0228
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	17868879	17870036	3	-4.4718
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	17870614	67673801	14446	0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	67675871	67678367	8	2.5813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	67699736	94283552	16507	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	94285155	94285294	2	-4.5613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	94286421	95717228	785	-0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	95718865	95719269	3	-4.3347
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	95721162	114209127	12400	-0.0141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	114210094	114210883	2	-5.8514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	114212395	131045122	10646	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	131047632	131048630	2	-5.8696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	131050291	135907644	2802	-0.0353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	135909344	135915484	4	-4.2569
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	135918465	138337606	981	-0.0891
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	138390697	138390796	2	-5.3162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	9	138391176	140211215	620	-0.0374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	62809	11009229	8570	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	11013322	11018272	3	-4.0831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	11018449	11504112	473	0.0257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	11505909	11506755	2	-3.8501
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	11508084	16722910	3756	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	16723661	16723795	2	-6.1677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	16726177	122870671	63350	-0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	122870684	122876711	2	-5.6594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	10	122877037	135356694	8450	-0.0167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	188572	2707120	850	-0.0795
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	2707279	2708706	3	6.1051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	2717367	111764589	64723	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	111765895	111766295	4	-4.1489
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	111766635	119162160	4780	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	119162835	119165128	3	-3.9924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	11	119166061	134449982	10732	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	12	20703	33278024	21361	-4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	12	33280096	33294612	10	-2.06
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	12	33298241	132288262	57998	-8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	13	17924949	114126499	60206	0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	18072124	64258600	26974	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	64264951	64264966	2	-6.5589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	64265547	76131591	6821	-0.0162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	76131652	76134470	2	-5.4829
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	76135083	77561166	896	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	77561221	77565951	4	-5.3909
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	77566340	95079501	10993	-0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	95085817	95089892	3	-5.6323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	95090455	95646555	437	-0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	95648314	95649188	2	-6.8418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	95650522	100654755	3384	-0.0271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	100654958	100659083	3	-4.383
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	14	100661581	106356482	2319	-0.0455
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	18276341	42296792	12929	-0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	42301863	42301983	2	-6.4686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	42303156	65035001	13843	-0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	65035407	65036351	5	-4.2939
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	65041133	68335487	2014	-0.0508
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	68337380	68337765	2	-5.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	68337822	76045350	3801	-0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	76045396	76053782	7	-3.3182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	76058865	81227979	2952	-0.0326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	81228959	81250354	13	-1.5776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	81250549	83849058	1277	-0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	83853833	83860275	5	-4.6971
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	83860301	87249952	2528	-0.0226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	87251007	87252515	2	-5.2109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	15	87252844	100286563	9010	-0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	777	12062376	8157	-0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	12065401	12065598	2	-5.7947
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	12066326	48177364	12753	-0.0311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	48178130	48178188	2	-5.6603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	48178461	52013243	2504	-0.0389
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	52015518	52027308	4	-2.8474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	52027430	52926175	723	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	52926455	52926959	3	-5.342
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	52927011	84035518	21656	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	84037366	84042231	2	-6.7179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	84048618	86427880	1872	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	86432357	86435769	2	-6.5123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	16	86437023	88815036	879	-0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	526	10427576	5603	-0.0462
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	10428031	10428512	2	-5.1649
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	10429036	14952624	3260	-0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	14955106	14957724	6	-4.8164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	14957971	31382410	8071	-0.0427
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	31382565	31382952	2	-6.5123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	31383838	36675234	2451	-0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	36676540	36683976	23	1.8626
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	36684057	70462522	18787	-0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	70464383	70472608	5	-3.3869
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	70472754	73227227	1282	-0.048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	73230147	73230241	2	-4.4076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	73230764	74915219	910	-0.0649
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	74915657	74915689	2	-4.5061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	74918003	75788521	333	-0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	75798988	75800122	2	-4.4221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	75800151	75865249	36	0.1255
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	75866022	75866113	2	3.4923
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	17	75867577	78643088	1072	-0.0565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	18	1543	75363154	47145	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	18	75363883	75401538	12	-2.2208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	18	75402741	76027915	290	0.0442
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	18	76028019	76041364	10	-2.4196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	18	76049326	76115554	33	0.2183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	41910	3085699	720	-0.0473
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	3094283	3106736	5	-4.5183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	3106902	10299889	2833	-0.0543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	10300501	10310392	6	-4.0968
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	10310514	35252105	8564	-0.0317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	35259505	35264596	3	-4.422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	35264960	55213044	10075	-0.0409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	55213143	55218855	2	-6.6439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	55218937	62552941	4216	-0.0577
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	62553042	62555432	4	3.3374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	19	62555628	63789666	665	-0.0271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	9305	927481	666	-0.0879
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	927720	933712	6	-3.9556
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	934820	1518737	429	-0.0264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	1518752	1538534	30	1.4452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	1541849	3966460	1509	-0.0308
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	3968945	3972512	7	-2.3533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	3972816	31150606	16872	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	31150723	31152723	2	-5.2826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	31153320	44894428	8091	-0.021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	44894516	44895273	2	-5.7696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	44895832	49860197	3262	-0.0433
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	49860267	49879228	6	-3.4667
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	49881169	58108420	5963	-0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	58109911	58110056	2	-5.8574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	58110137	60156034	1625	-0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	60157383	60162162	5	-4.714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	20	60170258	62426597	785	-0.1331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	9758742	24064631	7198	0.0221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	24064990	24067586	2	-5.5135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	24069086	45081697	14579	-0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	45084525	45085062	2	-6.4916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	45085639	45161874	42	0.0229
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	45163079	45164940	2	-5.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	21	45165271	46921385	914	0.0266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	14432528	20360362	2721	-0.0911
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	20366200	20379783	6	-3.5169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	20382814	21550094	880	-0.0232
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	21551124	21552000	3	-3.5776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	21552121	21752691	137	-0.0874
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	21752764	21762234	2	-7.2959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	21762323	43637590	13930	-0.0684
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	43637899	43655010	7	-5.2548
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	22	43655276	49581321	3931	-0.0432
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	108477	8589642	4341	-0.0484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	8589668	8589831	2	-6.9686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	8589863	9860213	905	-0.0811
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	9861055	9861409	3	-5.9515
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	9861609	10437980	392	-0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	10438137	10438315	2	-4.8696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	10445160	14018242	2452	-0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	14018318	14018629	3	-5.2648
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	14020827	24675514	6130	-0.0288
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	24677615	24689468	2	-6.1331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	24690031	29393058	2793	-0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	29395808	29395837	2	4.8374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	29397076	30752474	808	-0.0556
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	30752611	30752682	2	-4.5821
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	30752765	31222209	297	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	31222803	31224486	2	-6.9221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	31225654	65181904	14782	-0.0549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	65182678	65182848	2	-6.2653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	65183396	71147754	2750	-0.0232
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	71149819	71150279	2	-5.8009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	71150653	84876607	6272	-0.058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	84876702	84877493	5	-4.5392
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	84888216	90491937	2966	-0.0419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	90491981	90496898	3	-4.5568
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	90497221	105163265	7454	-0.0492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	105165017	105165712	4	-4.1563
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	105168808	109089107	1909	-0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	109089685	109093250	6	-3.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	109093377	111156541	1068	-0.0471
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	111157210	111157883	2	-5.9381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	111160331	114935415	2007	-0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	114935973	114936060	2	-5.9194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	114937139	116427580	915	-0.0307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	116427598	116428338	5	-4.5421
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	116428818	152094405	20449	-0.049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	152094712	152095287	3	-5.12
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	X	152095383	154835548	1086	-0.051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D02_228712	Y	2710438	57427647	8522	-1.0254
