Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	3208470	4449167	672	-0.1076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	4449240	4449262	2	-6.1156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	4449793	5868955	959	-0.0449
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	5869030	5869537	2	-6.3406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	5871264	23006579	8243	-0.0725
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	23010348	23015303	4	-6.1733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	23017188	43184183	9539	-0.0555
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	43185056	43198799	12	-2.78
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	43199178	110978216	38305	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	110979292	110982323	4	-3.4791
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	110984890	154623104	8265	-0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	154634062	154664605	15	-1.7768
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	154665567	159184619	2660	-0.0367
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	159186252	159193561	4	-3.6362
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	159193610	179158033	12310	-0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	179159575	179161780	4	-4.96
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	179161863	198252323	10889	-0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	198252621	198266748	4	-3.409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	198268749	199418871	729	0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	199419791	199422509	3	-4.3241
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	199422807	202389735	1684	-0.0441
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	202390294	202405925	18	-1.5247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	202406120	202547698	87	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	202549507	202550729	4	-4.2418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	202551515	203264998	553	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	203267266	203267955	2	-4.7927
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	203269093	203286683	15	-0.2395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	203287311	203290635	5	-4.795
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	203291247	245880329	25517	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	474222	41858006	22845	-0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	41858382	41858501	3	-5.2238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	41872815	42834630	602	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	42834694	42834743	2	-3.3495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	42838211	43037385	120	-0.1076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	43038311	43042467	4	-2.9537
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	43043964	43927160	495	-0.0732
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	43927935	43933828	2	-6.204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	43934194	46432913	1601	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	46433162	46433223	2	-3.1924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	46435886	47102695	458	-0.0593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47102743	47103216	2	-5.8071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47103320	47584000	232	-0.0435
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47584025	47590722	7	-3.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47591219	85865670	19913	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	85866540	85868632	2	-6.4128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	85868800	102137725	3925	-0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	102137773	102142634	6	-3.1292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	102142692	113535236	5435	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	113536947	113537143	2	-4.1371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	113538124	123207983	4870	-0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	123208843	123209617	3	-3.6793
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	123209634	128834685	2361	-0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	128840805	128841389	3	-3.5753
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	128842783	159282085	15740	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159282266	159282724	2	-4.0522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159283357	159549618	159	-0.0828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159549935	159554622	3	-2.8596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159557729	164613584	2749	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	164623454	164628845	6	-1.8153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	164632623	165992109	705	0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	165996222	165996406	4	-1.6128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	165996560	168863439	1672	0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	168865153	168865167	2	3.099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	168866243	174597124	3537	0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	174597740	174606721	6	-2.6282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	174611170	175946166	688	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	175949721	175951725	2	-3.1585
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	175954001	218241337	22077	0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	218241585	218245254	5	-3.1238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	218245344	233088264	8283	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	233089850	233091660	2	-5.6156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	233094676	240727144	4507	-0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	240729327	240729465	2	-6.3266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	240729887	241704700	404	-0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	241704845	241705597	4	-4.4659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	241707331	242124735	225	0.0495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	2187571	38631517	20300	-0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	38632903	38635940	4	-6.0794
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	38636537	45102790	3460	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	45106920	45163955	36	-0.7479
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	45168460	48462052	1574	-0.0324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	48462342	48462357	2	-2.6061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	48462390	49176794	240	-0.0497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	49183831	49183869	2	-3.2415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	49185736	50199020	353	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	50199229	50200033	2	-5.5589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	50200268	199023074	74307	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	1043934	3210120	788	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	3211898	3229430	4	-4.1408
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	3230399	5803785	1349	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	5803954	5805445	4	-3.8705
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	5805951	6117169	217	-0.1286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	6118753	6119396	3	-5.2752
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	6119776	8637639	1469	-0.0448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	8639175	8655763	8	-2.3273
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	8656980	36209474	16654	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	36212108	36240498	21	-1.2167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	36241137	40528592	2381	0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	40528617	40533374	6	-3.3806
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	40533798	111013520	34502	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	111016805	111027770	7	-2.603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	111030898	164771270	28331	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	164778951	164892310	43	-1.1351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	164899044	188150357	11103	-0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	188153570	188154024	2	3.1553
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	188159738	189836143	483	-0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	967233	5900023	3135	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	5906123	5906397	2	-4.2708
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	5908519	132596794	64108	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	132597149	132597622	2	-5.6203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	132598391	135234188	1626	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	135236807	135244011	12	-1.4934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	135246484	136397117	703	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	136397717	136398387	2	-5.1962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	136399280	178343921	24237	-0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	178348543	178348669	2	-5.5934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	178349056	180293075	881	0.0201
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	959281	31215627	17774	0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	31221031	31221193	2	-5.3922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	31230976	37091397	2030	-0.0786
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	37091859	37109990	10	-2.0842
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	37110160	44548700	4383	-0.0419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	44553424	44553968	3	-4.7373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	44555576	52228380	4345	-0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	52228974	52230809	5	-2.789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	52230843	110341819	28353	-0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	110344844	110400309	56	-1.1141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	110400917	170745844	33705	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	671810	4170018	1123	-0.0409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	4170029	4174523	5	-3.6806
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	4174875	150749537	72034	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	150750441	150752609	4	-3.7133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	150752768	157129499	3052	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	157130593	157130798	2	-5.4011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	157138756	158077879	325	0.0188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	607667	2973981	854	0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	2974287	2977814	6	-3.0531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	2977848	8537972	2178	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	8538115	8538134	2	-6.8514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	8540532	8543911	4	-2.2111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	8544624	11343926	1437	-0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	11344025	11346687	6	-3.0338
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	11346917	28271497	10729	-0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	28273895	28297630	10	-1.9593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	28297924	38677683	5453	-0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	38678519	38684336	4	-5.4549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	38685897	49699240	3207	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	49699454	49699485	2	-4.8955
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	49699594	73207609	13063	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	73207644	73210926	5	-3.8049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	73215633	74441234	786	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	74442212	74442529	2	-3.3435
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	74442587	96431585	11539	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	96432419	96432591	2	-3.7447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	96434663	99448365	1830	-0.0297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	99448435	99451953	5	-2.6392
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	99452625	102347004	1422	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	102348899	102349258	3	-5.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	102350123	145304484	24244	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	779932	91721341	35893	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	91721469	91724252	6	-3.6283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	91724549	110593381	11215	-0.0148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	110594444	110595461	6	-3.7123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	110595540	138631850	16078	-0.0359
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	138633359	138633496	2	-6.4141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	138633504	140058573	323	0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	405240	7081417	4024	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	7081986	7082762	3	-4.54
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	7085790	73495958	35768	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	73496781	73503361	4	-6.1419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	73511678	80830723	4232	-0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	80832904	80842710	7	-2.6182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	80842723	85327866	2262	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	85329961	85330101	2	-4.6677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	85330154	99581125	8184	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	99586654	99586830	3	-3.7788
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	99586941	105782366	3030	-0.0276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	105783393	105786809	4	-4.1276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	105786953	135075077	17936	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	11	446120	6231455	2484	-0.0664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	11	6238775	6239384	2	-5.9916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	11	6239652	133647740	69695	-0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	760163	51403290	25360	-0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	51403424	51406158	2	-5.188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	51406498	56164997	2259	-0.0244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	56172876	56178071	2	-3.4702
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	56190698	106424911	29517	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	106425473	106425723	2	-4.8585
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	106426898	131665411	12247	-0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	18348806	21205917	1091	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	21209489	21211165	3	-5.2181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	21211481	38431851	10670	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	38433359	38434312	6	-3.5517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	38434597	110004720	39953	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	110005327	110005866	3	-4.6423
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	110006337	110922142	503	-0.0521
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	110922638	110922912	2	-6.1818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	110923034	114005560	1094	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	19571208	23178227	1158	0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	23179536	23185313	5	-3.696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	23185564	36096067	7164	-0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	36096646	36097282	2	-3.9905
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	36097606	75637971	21084	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	75638668	75638683	2	-6.4141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	75639274	93633857	10618	-0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	93636428	93652679	8	-2.5604
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	93652803	105059083	6259	-0.0355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	21238778	22993596	760	0.0301
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	22994094	22994866	2	-3.0745
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	22995067	29247894	1972	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	29250670	29253123	4	-4.3678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	29254644	32441027	1610	-0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	32773035	32773368	3	2.1048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	32774556	34956569	1423	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	34959356	34962040	3	-4.2322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	34962248	56262417	11724	-0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	56264799	56265956	3	-3.2015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	56266198	59057254	1859	0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	59057684	59058066	2	-3.9543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	59058102	65035001	3549	-0.031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	65035407	65036351	4	-4.4696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	65041133	72451904	4243	-0.0276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	72454562	72457877	5	-4.129
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	72458264	77077655	1841	-0.0576
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	77077978	77079576	2	-5.945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	77080188	87669953	5745	-0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	87670333	87671627	4	-3.4805
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	87671866	91446759	2370	-0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	91446830	91448829	2	-5.0772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	91450443	93535563	909	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	93540384	93540934	3	-3.1979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	93541008	99701830	3482	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	593460	12511181	5954	-0.0329
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	12513237	12525966	16	-1.6938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	12526194	23103147	3025	-0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	23103494	23104239	2	-3.2526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	23106311	27095047	2562	0.0131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	27095170	27100823	5	-3.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	27102469	56559488	8329	-0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	56561680	56568951	7	-3.2486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	56569142	64951891	5201	-0.0174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	64956026	64957446	2	-6.1668
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	64960701	69371859	1771	-0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	69372288	69376130	2	-3.8846
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	69376204	80179315	6821	-0.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	80179377	80219948	31	-1.5619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	80222890	82537102	1991	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	82537138	82551444	4	-3.7181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	82554046	85618585	1513	-0.0316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	85618691	85619746	2	-6.2149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	85620720	87907437	696	-0.0603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	945452	16781614	7276	-0.0317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	16789645	16790204	2	-6.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	16791863	19579135	1079	-0.1036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	19583544	19585473	2	-6.2761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	19586493	23866339	1225	-0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	23867278	23875628	2	-4.3678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	23876494	32297397	3419	-0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	32297478	32302414	6	-4.1619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	32302463	35920071	1447	-0.0336
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	35921701	35924039	3	-4.4272
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	35924870	72756485	17846	-0.0231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	72756611	72758536	4	-4.276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	72758874	78510305	1987	-0.0561
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	319586	11015325	5873	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	11016586	11020515	2	-4.2485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	11022027	42551179	16380	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	42551868	42551909	2	-3.9847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	42554313	58178221	9648	-0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	58178988	58179224	2	-3.9518
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	58179838	70389710	5284	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	70394892	70395531	2	-6.2664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	70396511	74832814	2698	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	74835818	74837368	5	-3.1041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	74843111	75210228	195	0.0687
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	235018	939135	89	-0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	939136	973781	11	-1.7027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	976304	3100783	469	0.0574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	3103982	3106902	2	-5.6733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	3107073	9930513	2355	-0.0345
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	9932910	9934324	2	-4.7379
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	9936410	19505650	3915	-0.0432
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	19510748	19532121	10	-2.9152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	19532201	63570038	15175	-0.0237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	403764	17689758	10478	-0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	17694155	17696967	4	-1.9521
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	17697818	17697899	2	-6.5078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	17699709	56782001	21379	-0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	56785024	56785099	2	-6.1018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	56785560	60447831	2391	-0.0596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	60448162	60448248	2	-6.0751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	60451450	61690281	332	0.0262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	21	14269492	45081697	18796	-0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	21	45084525	45097190	7	-4.1977
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	21	45097468	46502723	486	-0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	15803930	43388965	12731	-0.0474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	43390616	43405168	6	-3.8096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	43407354	43618920	130	-0.1094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	43639593	43655010	3	-6.1088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	43655276	46120122	1466	-0.0618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	46127905	46130986	4	-3.8807
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	46132155	46146497	8	0.2291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	46146557	46149167	5	-5.371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	46149442	47086920	729	-0.0739
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47087618	47090280	5	-3.8018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47090537	47203379	102	-0.1354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47208708	47209058	2	-5.0661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47210207	47717016	313	-0.0769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	3167107	12806031	3203	-0.0164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	12806582	12807110	3	-4.8157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	12807209	55949475	18684	-0.0335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	55950843	55952531	2	-6.0917
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	55953240	70263539	3924	-0.0626
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	70268563	70271613	5	-3.5925
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	70271811	100485858	11334	-0.0405
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	100491337	100502134	4	-3.6962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	100502250	107201026	2788	-0.0291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	107201068	107203941	2	-5.6804
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	107204059	154558783	20765	-0.0383
