Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	3218610	4549307	672	-0.1076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	4549380	4549402	2	-6.1156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	4549933	5946368	959	-0.0449
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	5946443	5946950	2	-6.3406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	5948677	23133992	8241	-0.0724
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	23137761	23142716	4	-6.1733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	23144601	43411596	9539	-0.0555
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	43412469	43426212	12	-2.78
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	43426591	111176693	38359	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	111177769	111180800	4	-3.4791
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	111183367	156356480	8261	-0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	156367438	156397981	15	-1.7768
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	156398943	160917995	2660	-0.0367
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	160919628	160926937	4	-3.6362
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	160926986	180891410	12308	-0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	180892952	180895157	4	-4.96
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	180895240	199985700	10889	-0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	199985998	200000125	4	-3.409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	200002126	201152248	729	0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	201153168	201155886	3	-4.3241
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	201156184	204123112	1684	-0.0441
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	204123671	204139302	18	-1.5247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	204139497	204281075	87	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	204282884	204284106	4	-4.2418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	204284892	204998375	553	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	205000643	205001332	2	-4.7927
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	205002470	205020060	15	-0.2395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	205020688	205024012	5	-4.795
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	1	205024624	247813706	25515	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	484222	42004502	22842	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	42004878	42004997	3	-5.2238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	42019311	42981126	602	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	42981190	42981239	2	-3.3495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	42984707	43183881	120	-0.1076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	43184807	43188963	4	-2.9537
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	43190460	44073656	495	-0.0732
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	44074431	44080324	2	-6.204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	44080690	46579409	1601	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	46579658	46579719	2	-3.1924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	46582382	47249191	458	-0.0593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47249239	47249712	2	-5.8071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47249816	47730496	232	-0.0435
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47730521	47737218	7	-3.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	47737715	65556893	8933	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	65557075	65557163	2	-3.7696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	65558588	86012159	10974	-0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	86013029	86015121	2	-6.4128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	86015289	102771293	3925	-0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	102771341	102776202	6	-3.1292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	102776260	123491513	10307	-0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	123492373	123493147	3	-3.6793
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	123493164	129118215	2360	-0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	129124335	129124919	3	-3.5753
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	129126313	159573839	15737	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159574020	159574478	2	-4.0522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159575111	159841372	159	-0.0828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159841689	159846376	3	-2.8596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	159849483	164905338	2749	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	164915208	164920599	6	-1.8153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	164924377	166283863	706	0.0161
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	166287976	166288160	4	-1.6128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	166288314	169155193	1672	0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	169156907	169156921	2	3.099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	169157997	174888878	3538	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	174889494	174898475	6	-2.6282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	174902924	176237920	688	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	176241475	176243479	2	-3.1585
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	176245755	218533092	22076	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	218533340	218537009	5	-3.1238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	218537099	233380020	8283	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	233381606	233383416	2	-5.6156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	233386432	241078471	4508	-0.0227
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	241080654	241080792	2	-6.3266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	241081214	242056027	404	-0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	242056172	242056924	4	-4.4659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	2	242058658	242476062	225	0.0495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	2212571	38656513	20299	-0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	38657899	38660936	4	-6.0794
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	38661533	45127786	3460	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	45131916	45188951	36	-0.7479
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	45193456	48487048	1574	-0.0324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	48487338	48487353	2	-2.6061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	48487386	49201790	240	-0.0497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	49208827	49208865	2	-3.2415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	49210732	50224016	353	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	50224225	50225029	2	-5.5589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	50225264	72641416	13205	0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	72643275	72645589	3	-3.619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	72648022	123064831	24276	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	123065778	123068286	3	-3.9921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	3	123070123	197538677	36816	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	1053934	3240322	788	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	3242100	3259632	4	-4.1408
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	3260601	5752884	1349	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	5753053	5754544	4	-3.8705
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	5755050	6066268	217	-0.1286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	6067852	6068495	3	-5.2752
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	6068875	8586739	1469	-0.0448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	8588275	8604863	8	-2.3273
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	8606080	36533079	16654	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	36535713	36564103	21	-1.2167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	36564742	40833835	2381	0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	40833860	40838617	6	-3.3806
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	40839041	110794071	34502	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	110797356	110808321	7	-2.603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	110811449	164551820	28332	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	164559501	164672860	43	-1.1351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	164679594	187913363	11104	-0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	187916576	187917030	2	3.1553
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	4	187922744	188763651	482	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	914233	5847023	3136	0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	5853123	5853397	2	-4.2708
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	5855519	132568895	64106	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	132569250	132569723	2	-5.6203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	132570492	135206289	1626	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	135208908	135216112	12	-1.4934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	135218585	136369218	702	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	136369818	136370488	2	-5.1962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	136371381	178411315	24239	-0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	178415937	178416063	2	-5.5934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	5	178416450	180360469	881	0.0201
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	1014281	31107648	17775	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	31113052	31113214	2	-5.3922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	31122997	36983419	2030	-0.0786
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	36983881	37002012	10	-2.0842
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	37002182	44440722	4383	-0.0419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	44445446	44445990	3	-4.7373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	44447598	52120421	4346	-0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	52121015	52122850	5	-2.789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	52122884	110235126	28352	-0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	110238151	110293616	56	-1.1141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	6	110294224	170903919	33712	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	705284	4203492	1123	-0.0409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	4203503	4207997	5	-3.6806
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	4208349	157436738	75092	-0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	157437832	157438037	2	-5.4011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	7	157445995	158385118	325	0.0188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	617667	2986574	855	0.0142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	2986880	2990407	6	-3.0531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	2990441	8500562	2178	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	8500705	8500724	2	-6.8514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	8503122	8506501	4	-2.2111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	8507214	11306516	1436	-0.0199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	11306615	11309277	6	-3.0338
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	11309507	28215578	10729	-0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	28217976	28241711	10	-1.9593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	28242005	38558526	5453	-0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	38559362	38565179	4	-5.4549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	38566740	49536687	3208	-0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	49536901	49536932	2	-4.8955
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	49537041	73045055	13066	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	73045090	73048372	5	-3.8049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	73053079	74278680	787	-0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	74279658	74279975	2	-3.3435
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	74280033	96362409	11538	4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	96363243	96363415	2	-3.7447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	96365487	99379189	1831	-0.0295
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	99379259	99382777	5	-2.6392
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	99383449	102277828	1422	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	102279723	102280082	3	-5.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	8	102280947	145232496	24247	-0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	789932	92681521	35900	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	92681649	92684432	6	-3.6283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	92684729	111553560	11219	-0.0148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	111554623	111555640	6	-3.7123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	111555719	139512029	16079	-0.0359
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	139513538	139513675	2	-6.4141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	9	139513683	140938752	323	0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	415240	7041411	4024	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	7041980	7042756	3	-4.54
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	7045784	73825952	35767	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	73826775	73833355	4	-6.1419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	73841672	81160717	4232	-0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	81162898	81172704	7	-2.6182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	81172717	105792376	13481	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	105793403	105796819	4	-4.1276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	10	105796963	135225087	17936	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	11	456120	6274879	2483	-0.0665
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	11	6282199	6282808	2	-5.9916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	11	6283076	134142530	69688	-0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	889902	53117023	25357	-0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	53117157	53119891	2	-5.188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	12	53120231	133155338	44026	-0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	19450806	22307917	1091	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	22311489	22313165	3	-5.2181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	22313481	39533851	10668	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	39535359	39536312	6	-3.5517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	39536597	111206719	39951	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	111207326	111207865	3	-4.6423
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	111208336	112124141	503	-0.0521
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	112124637	112124911	2	-6.1818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	13	112125033	114987458	1094	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	20501368	24108387	1158	0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	24109696	24115473	5	-3.696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	24115724	37026316	7164	-0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	37026895	37027531	2	-3.9905
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	37027855	76568218	21080	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	76568915	76568930	2	-6.4141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	14	76569521	105988038	16886	-0.0229
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	23687685	25442503	760	0.0301
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	25443001	25443773	2	-3.0745
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	25443974	31460602	1973	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	31463378	31465831	4	-4.3678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	31467352	34653735	1610	-0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	34985743	34986076	3	2.1048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	34987264	37169277	1423	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	37172064	37174748	3	-4.2322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	37174956	58475125	11725	-0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	58477507	58478664	3	-3.2015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	58478906	61269962	1857	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	61270392	61270774	2	-3.9543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	61270810	67247947	3549	-0.031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	67248353	67249297	4	-4.4696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	67254079	74664851	4243	-0.0276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	74667509	74670824	5	-4.129
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	74671211	79290600	1841	-0.0576
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	79290923	79292521	2	-5.945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	79293133	89868949	5745	-0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	89869329	89870623	4	-3.4805
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	89870862	93645755	2370	-0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	93645826	93647825	2	-5.0772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	93649439	95734559	909	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	95739380	95739930	3	-3.1979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	15	95740004	101884307	3481	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	653459	12603680	5954	-0.0329
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	12605736	12618465	16	-1.6938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	12618693	23195646	3025	-0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	23195993	23196738	2	-3.2526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	23198810	27187546	2562	0.0131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	27187669	27193322	5	-3.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	27194968	58001987	8329	-0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	58004179	58011450	7	-3.2486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	58011641	66394390	5201	-0.0174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	66398525	66399945	2	-6.1668
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	66403200	70814358	1771	-0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	70814787	70818629	2	-3.8846
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	70818703	81621814	6765	-0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	81621876	81662447	31	-1.5619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	81665389	83979601	1991	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	83979637	83993943	4	-3.7181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	83996545	87061084	1513	-0.0316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	87061190	87062245	2	-6.2149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	16	87063219	89379936	696	-0.0603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	998702	16840889	7276	-0.0317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	16848920	16849479	2	-6.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	16851138	19638543	1079	-0.1036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	19642952	19644881	2	-6.2761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	19645901	26842212	1225	-0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	26843151	26851501	2	-4.3678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	26852367	35223284	3419	-0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	35223365	35228301	6	-4.1619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	17	35228350	80917016	21287	-0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	329586	11025325	5874	0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	11026586	11030515	2	-4.2485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	11032027	44297181	16378	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	44297870	44297911	2	-3.9847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	44300315	60027241	9647	-0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	60028008	60028244	2	-3.9518
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	60028858	72238730	5282	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	72243912	72244551	2	-6.2664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	72245531	76731826	2698	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	76734830	76736380	5	-3.1041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	18	76742123	77109240	195	0.0687
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	284018	988135	89	-0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	988136	1022781	11	-1.7027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	1025304	3149783	469	0.0574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	3152982	3155902	2	-5.6733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	3156073	19644650	6272	-0.0414
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	19649748	19671121	10	-2.9152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	19	19671201	58878226	15175	-0.0237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	455764	17741758	10480	-0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	17746155	17748967	4	-1.9521
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	17749818	17749899	2	-6.5078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	17751709	57348606	21379	-0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	57351629	57351704	2	-6.1018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	57352165	61014436	2391	-0.0596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	61014767	61014853	2	-6.0751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	20	61018055	62219837	332	0.0262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	21	15347621	46257269	18796	-0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	21	46260097	46272762	7	-4.1977
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	21	46273040	47678295	486	-0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	17423930	45010301	12730	-0.0472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	45011952	45026504	6	-3.8096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	45028690	45240256	130	-0.1094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	45260929	45276346	3	-6.1088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	45276612	47741458	1466	-0.0618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47749241	47752322	4	-3.8807
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47753491	47767833	8	0.2291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47767893	47770503	5	-5.371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	47770778	48708256	729	-0.0739
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	48708954	48711616	5	-3.8018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	48711873	48824715	102	-0.1354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	48830044	48830394	2	-5.0661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	22	48831543	49331012	313	-0.0769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	3157107	12896110	3204	-0.0163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	12896661	12897189	3	-4.8157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	12897288	55932750	18684	-0.0337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	55934118	55935806	2	-6.0917
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	55936515	70346814	3932	-0.062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	70351838	70354888	5	-3.5925
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	70355086	100599202	11340	-0.0407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	100604681	100615478	4	-3.6962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	100615594	107314370	2790	-0.0303
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	107314412	107317285	2	-5.6804
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D08_228808	X	107317403	154905589	20767	-0.0387
