Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	51598	18670290	9265	0.0384
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	18676704	18684763	8	-2.9513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	18684903	72535958	30891	0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	72541006	72584492	49	0.9748
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	72585028	112491849	24445	0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	112497488	112498913	25	-2.2013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	112507479	147308142	6047	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	147308346	147545095	130	-0.6248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	147546464	203286683	34832	0.0251
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	203287311	203289637	3	-3.4099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	203290635	219055113	10259	-0.0323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	219055560	219055953	2	-4.5706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	219059556	220432267	950	0.0525
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	220441457	220443627	2	-3.1032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	220448757	221700168	675	-0.0475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	221701053	221701752	2	-3.7428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	221701815	224639351	1643	0.0375
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	224639417	224640025	2	-5.0573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	224643529	247191011	15035	0.0214
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	2784	106249661	63183	0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	106249763	106251411	5	-3.5789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	106251445	242163554	78934	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242163769	242164778	2	-5.1714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242166443	242567196	38	0.2962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242569223	242591956	25	-1.3264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242606740	242620909	22	0.0447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242620968	242674931	46	-1.1873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242677972	242738129	40	-0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	35345	9338980	7694	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	9339004	9342619	4	-2.6926
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	9343125	14151330	3054	0.0567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	14151447	14154705	3	-3.1638
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	14154971	54403149	23864	0.0222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	54410603	54410629	2	-4.0335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	54411819	124335019	39743	0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	124336495	124336747	3	-3.3076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	124340260	163990962	23280	0.0187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	163995351	164109297	72	0.7087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	164111308	187384064	13382	0.0405
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	187384127	187384724	2	3.4307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	187385251	194357441	4855	0.026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	194360596	194365597	20	-1.3355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	194369129	199380515	2533	0.107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	2281	6353608	3226	-0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	6354581	6354892	3	-6.6892
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	6355245	9819392	2118	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	9819488	9839910	24	-1.9578
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	9840001	34455449	16190	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	34462895	34501120	38	0.6833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	34506267	35484766	602	0.0326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	35489585	35499538	5	-2.9154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	35504267	191261904	89666	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	68532	6564314	4791	0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	6571438	6571618	2	-4.6944
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	6571858	8110974	1201	0.0288
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	8112187	8112421	3	-4.7054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	8113276	31589967	14771	0.027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	31590090	31590222	3	-5.4533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	31595046	65935722	18402	0.0401
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	65936575	65936687	2	-4.1666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	65939284	81454519	8360	0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	81455034	81463238	3	-3.1734
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	81463794	125162142	25929	0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	125162208	125162564	4	-2.766
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	125164470	152947988	16330	0.0209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	152948024	152948351	2	-5.1633
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	152949087	168449379	10123	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168449534	168449600	2	3.3539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168450265	168652669	191	0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168653626	168653770	2	3.5535
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168655237	175172307	4510	0.0387
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	175172813	175174563	3	-3.0628
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	175175081	176449488	527	0.0503
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	176449776	176450352	5	-1.6949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	176450436	177650995	403	0.0972
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	177651123	177651801	3	2.3757
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	177652029	179480185	1058	0.0699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	179488958	179489762	2	-3.7851
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	179490221	180722926	598	0.098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	94661	29951413	20358	-0.0861
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	29952013	30029202	43	0.6938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	30045083	31035846	338	-0.0732
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	31038820	31048548	5	-4.9212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	31052961	31455795	254	0.0203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	31455909	31459421	11	-1.3354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	31459866	32515131	383	0.1647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	32516505	32520413	6	1.461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	32520458	32538707	11	1.3048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	32538953	56125661	14245	-0.1066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	56125743	56126544	2	-3.7428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	56126999	71784285	7003	-0.1154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	71785587	71785740	2	2.8596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	71789723	72086412	204	-0.2117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	72090767	72091913	3	2.6828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	72093997	79019608	4242	-0.1281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	79025784	79089311	107	-0.9246
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	79091659	124918642	27217	-0.117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	124919710	124928918	3	-4.4922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	124929365	166951281	27052	-0.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	166951333	166952315	3	-6.0231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	166953281	170892930	2372	-0.1469
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	52911	4123173	1884	0.1692
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	4124880	4125079	2	-3.8336
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	4127897	16336568	8591	0.1632
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	16336713	16336932	2	-2.867
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	16339231	22557751	4770	0.1589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	22560214	22562629	2	-3.6171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	22567632	84002044	34562	0.1647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	84002691	84003275	3	-2.6942
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	84003724	125832887	23815	0.1524
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	125832922	125833851	9	1.8399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	125834112	143910061	10871	0.1548
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	143910929	143910953	2	-3.7876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	143912438	150707387	3963	0.1509
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	150707507	150707594	2	-4.7661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	150710804	158819765	4964	0.1531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	21254	3307156	2568	-0.0462
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	3307824	3308045	2	-6.1847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	3308063	39349816	26428	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	39354760	39506122	56	-2.0456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	39507456	41509670	1379	-0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	41510290	41510745	2	3.1395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	41515724	56025431	6023	0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	56028034	56028448	2	-4.044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	56029678	64438831	5355	0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	64440057	64441191	2	-2.9562
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	64442156	65011190	300	0.0385
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	65011451	65011672	6	2.9696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	65012064	73569240	4839	0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	73569801	73570378	3	-2.8422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	73571799	102571699	16598	0.0319
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	102573687	102573841	3	-2.7546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	102577101	103024178	338	0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	103035125	103039312	3	2.3727
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	103039604	112364214	5362	0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	112364257	112364436	4	-2.2716
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	112370428	137045997	16347	0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	137046965	137047111	2	-5.2688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	137047845	143848757	4563	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	143854267	143876929	4	2.9415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	143878907	146268959	765	0.1397
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	36587	5159598	5008	-0.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	5164829	5168579	4	-3.284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	5169629	8383996	2582	-0.0704
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8386388	8386502	3	-3.1284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8386744	8421163	41	-0.2254
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8422349	8422782	3	-2.4351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8423022	9381051	783	-0.0869
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	9383043	9383275	3	-5.9278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	9383437	44181813	21203	-0.1151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	44183430	44205408	10	1.4276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	44206850	140211215	45496	-0.0949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	62809	60524064	37973	-0.0946
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	60525908	60535862	7	-2.5614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	60536276	67752745	4778	-0.1135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	67754797	67792538	25	-1.0863
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	67792650	72425129	2899	-0.092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	72425160	72426336	2	3.3577
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	72427439	73495958	733	-0.09
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	73501412	73502865	2	-7.5064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	73503361	94106871	12659	-0.1027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	94109941	94374232	104	0.4491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	94379068	131070629	23848	-0.1022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	131072363	131072928	3	-3.4592
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	131073675	133500763	1815	-0.1112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	133501334	133501603	2	-4.6904
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	133502755	135356694	762	-0.061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	188572	3118970	1075	0.0384
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3121367	3121988	3	-4.1007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3122131	3130753	7	-1.1657
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3132261	3600883	173	-0.0452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3601258	3635254	27	0.7993
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3636234	4926819	987	-0.0475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	4926853	4930605	23	-2.3696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	4931740	9763701	3403	-0.0291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	9766532	9768192	4	-2.9613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	9768275	11043635	859	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	11045060	11045666	2	4.0451
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	11047196	34175434	15811	-0.0303
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	34177080	34177825	3	-3.1703
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	34178029	55426966	10520	-0.019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	55432601	55432875	2	4.4531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	55433475	64068424	4609	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	64068729	64068979	2	-5.9901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	64069867	83457074	10332	-0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	83462135	83465043	2	-3.0827
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	83466122	88018176	2975	-0.029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	88019997	88020266	5	3.0557
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	88021766	134449982	31299	-0.0205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	20703	528683	267	0.1745
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	528917	531917	4	-1.2411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	532242	11110690	6539	-0.0581
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	11111991	11132799	12	-1.7279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	11143141	31937210	13880	-0.0237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	31939749	31959169	14	1.2193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	31959282	44246385	6275	0.0268
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	44248041	44248684	6	-3.3281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	44248994	130391312	52534	0.0372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	130391644	130391708	2	-6.9381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	130399163	132288262	790	0.1742
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	17924949	29110446	7378	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	29110940	29111039	2	-3.9833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	29111872	39824654	7373	-0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	39828271	39836668	2	-4.2174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	39837330	42673704	1761	-0.0271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	42674912	42675338	3	2.9876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	42679811	54098148	6800	-0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	54100373	54100461	2	-3.5715
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	54101439	60992788	3816	-0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	61003932	61004609	2	-3.1419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	61004932	63576750	1370	-0.0229
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	63577637	63577785	2	3.3491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	63580681	70173422	4045	-0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	70173641	70175510	5	-3.8213
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	70178035	114126499	28285	-0.0114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	18072124	19270249	84	-0.0738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	19270957	19490079	100	-0.6325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	19492423	33046668	8283	-0.0609
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	33047263	33048169	3	-4.0523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	33048257	106356482	43897	-0.0914
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	15	18276341	100286563	48959	-0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	777	296251	142	0.3873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	297141	300318	5	-2.1685
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	300933	11502375	7876	0.0343
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	11503322	11506474	2	3.667
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	11507731	12517946	633	0.0789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	12518398	12519213	5	-3.0714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	12519274	17948301	3120	0.1045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	17950504	17950833	2	-4.1338
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	17951998	19312282	500	0.1415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	19314423	19317918	3	-1.8979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	19321487	22349521	1559	0.1012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	22465433	22611363	70	-0.7921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	22612021	85225668	33542	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	85225974	85229786	4	-3.7003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	85230442	88815036	1747	0.0636
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	526	5060996	2498	0.1514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	5065632	5079237	2	8.5409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	5082524	18299671	8146	0.0641
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	18299674	18405946	27	-1.4365
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	18409922	29858052	5608	-0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	29861005	29861106	2	3.2634
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	29862528	31897905	1002	-0.0371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	31898717	31898958	3	-2.7426
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	31906733	40688939	4308	-0.0318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	40690761	40692470	2	-5.8635
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	40694724	41560151	461	0.0409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	41563921	41564451	3	-2.7817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	41568205	41602401	34	0.2443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	41602739	41719947	54	-0.2279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	41750187	42078158	42	1.2549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	42092938	52058648	5918	0.0484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	52059828	52059854	2	-3.2381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	52060037	78643088	14287	0.0654
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	1543	6030997	4065	0.0404
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	6031594	6033025	2	-3.1286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	6033257	8631331	1867	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	8632003	8632189	2	-4.0985
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	8633302	20822794	6069	0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	20825051	20825396	2	-3.4187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	20826535	36512068	9583	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	36512080	36530398	43	0.7177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	36530672	42551179	3759	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	42551868	42551909	2	-4.5105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	42554313	66201829	15867	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	66202453	66315754	65	0.5753
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	66316029	76115554	6708	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	19	41910	20400414	8303	0.0631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	19	20402117	20513302	64	-0.8621
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	19	20515685	63789666	19037	0.0572
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	9305	1516083	1116	0.1028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	1518737	1541893	33	2.1538
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	1545946	60447831	37972	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	60448076	60451450	4	-6.1337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	60451660	62426597	684	0.0686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	21	9758742	46921385	22997	0.0446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	22	14432528	48680744	21562	-0.0415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	22	48680846	48683439	3	-3.8404
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	22	48687856	49581321	336	0.1831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	X	108477	154835548	80739	-0.0505
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	2710438	23072987	7568	-1.0294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	23150257	23516243	31	-2.1595
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	23569054	24234087	68	-1.0936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	24234480	25008090	254	-1.7651
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	25014206	25234763	42	-2.7773
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	25330664	25600140	39	-1.4759
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	25633709	25649572	2	-5.6962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	25664067	26527268	263	-1.7877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	26547048	26681504	25	-0.9623
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	26687080	26731140	13	-1.8612
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	26731407	57427647	221	-0.9712
