Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	61735	18797703	9264	0.0384
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	18804117	18812176	8	-2.9513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	18812316	72763370	30952	0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	72768418	72811904	49	0.9748
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	72812440	112690326	24436	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	112695965	112697390	25	-2.2013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	112705956	149041518	6043	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	149041722	149278471	130	-0.6248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	149279840	158427551	4677	0.0439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	158432808	158433074	4	2.4475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	158434295	205020060	30149	0.0218
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	205020688	205023014	3	-3.4099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	205024012	220988490	10260	-0.0322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	220988937	220989330	2	-4.5706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	220992933	222365644	950	0.0525
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	222374834	222377004	2	-3.1032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	222382134	223633545	675	-0.0475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	223634430	223635129	2	-3.7428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	223635192	226572728	1642	0.0377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	226572794	226573402	2	-5.0573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	1	226576906	249224388	15033	0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	12784	106883229	63175	0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	106883331	106884979	5	-3.5789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	106885013	242514881	78932	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242515096	242516105	2	-5.1714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242517770	242918523	38	0.2962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242920550	242943283	25	-1.3264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242958067	242972236	22	0.0447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	242972295	243026258	46	-1.1873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	2	243029299	243089456	40	-0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	60345	9363980	7695	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	9364004	9367619	4	-2.6926
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	9368125	14176329	3053	0.0568
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	14176446	14179704	3	-3.1638
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	14179970	54428109	23866	0.0222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	54435563	54435589	2	-4.0335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	54436779	122852329	39737	0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	122853805	122854057	3	-3.3076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	122857570	162508268	23279	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	162512657	162626603	72	0.7087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	162628614	185901370	13383	0.0405
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	185901433	185902030	2	3.4307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	185902557	192874747	4855	0.026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	192877902	192882903	20	-1.3355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	3	192886435	197896118	2533	0.107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	12281	6302707	3226	-0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	6303680	6303991	3	-6.6892
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	6304344	10210294	2118	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	10210390	10230812	24	-1.9578
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	10230903	34779054	16190	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	34786500	34824725	38	0.6833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	34829872	35808371	602	0.0326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	35813190	35823143	5	-2.9154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	4	35827872	191027923	89669	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	15532	6511314	4792	0.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	6518438	6518618	2	-4.6944
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	6518858	8057974	1202	0.0292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	8059187	8059421	3	-4.7054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	8060276	31554210	14769	0.027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	31554333	31554465	3	-5.4533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	31559289	65899966	18400	0.0401
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	65900819	65900931	2	-4.1666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	65903528	81418763	8362	0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	81419278	81427482	3	-3.1734
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	81428038	125134243	25929	0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	125134309	125134665	4	-2.766
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	125136571	152967795	16331	0.0209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	152967831	152968158	2	-5.1633
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	152968894	168516801	10124	0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168516956	168517022	2	3.3539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168517687	168720091	191	0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168721048	168721192	2	3.5535
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	168722659	171556788	1924	0.0373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	171558015	171558404	2	-2.4074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	171558807	175239701	2585	0.0416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	175240207	175241957	3	-3.0628
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	175242475	176516882	527	0.0503
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	176517170	176517746	5	-1.6949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	176517830	177718389	403	0.0972
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	177718517	177719195	3	2.3757
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	177719423	179547579	1058	0.0699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	179556352	179557156	2	-3.7851
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	5	179557615	180790320	598	0.098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	149661	29843434	20357	-0.0862
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	29844034	29921223	43	0.6938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	29937104	30927867	338	-0.0732
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	30930841	30940569	5	-4.9212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	30944982	31347816	254	0.0203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	31347930	31351442	11	-1.3354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	31351887	32407153	383	0.1647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	32408527	32412435	6	1.461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	32412480	32430729	11	1.3048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	32430975	56017702	14246	-0.1064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	56017784	56018585	2	-3.7428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	56019040	71727564	7004	-0.1148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	71728866	71729019	2	2.8596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	71733002	72029691	204	-0.2117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	72034046	72035192	3	2.6828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	72037276	78962889	4240	-0.1281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	78969065	79032592	107	-0.9246
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	79034940	124876943	27219	-0.117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	124878011	124887219	3	-4.4922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	124887666	167031291	27055	-0.1086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	167031343	167032325	3	-6.0231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	6	167033291	171051005	2372	-0.1469
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	43355	4156647	1882	0.168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	4158354	4158553	2	-3.8336
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	4161371	16370043	8593	0.163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	16370188	16370407	2	-2.867
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	16372706	22591226	4770	0.1589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	22593689	22596104	2	-3.6171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	22601107	84164108	34563	0.1647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	84164755	84165339	3	-2.6942
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	84165788	126045651	23817	0.1522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	126045686	126046615	9	1.8399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	126046876	144279128	10870	0.1547
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	144279996	144280020	2	-3.7876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	144281505	151076454	3961	0.151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	151076574	151076661	2	-4.7661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	7	151079871	159127004	4967	0.153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	31254	3319748	2569	-0.0462
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	3320416	3320637	2	-6.1847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	3320655	39230659	26428	-0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	39235603	39386965	56	-2.0456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	39388299	41390513	1379	-0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	41391133	41391588	2	3.1395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	41396567	55862877	6022	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	55865480	55865894	2	-4.044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	55867124	64276277	5357	0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	64277503	64278637	2	-2.9562
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	64279602	64848636	300	0.0385
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	64848897	64849118	6	2.9696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	64849510	73406686	4842	0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	73407247	73407824	3	-2.8422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	73409245	102502523	16597	0.0319
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	102504511	102504665	3	-2.7546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	102507925	102955002	338	0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	102965949	102970136	3	2.3727
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	102970428	112295038	5364	0.026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	112295081	112295260	4	-2.2716
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	112301252	115631436	1769	0.024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	115632043	115641731	36	-0.6529
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	115650697	119238335	2264	0.0452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	119238473	119238894	2	-2.9975
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	119239716	126808714	4971	0.0386
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	126808810	126809098	2	-2.9024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	126809807	133931761	4898	0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	133935292	133935499	2	-3.0493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	133935740	136976815	2405	0.0146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	136977783	136977929	2	-5.2688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	136978663	143851755	4563	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	143857265	143879927	4	2.9415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	8	143881905	146298155	765	0.1397
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	46587	5169598	5010	-0.1089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	5174829	5178579	4	-3.284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	5179629	8393996	2582	-0.0704
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8396388	8396502	3	-3.1284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8396744	8431163	41	-0.2254
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8432349	8432782	3	-2.4351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	8433022	9391051	783	-0.0869
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	9393043	9393275	3	-5.9278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	9393437	44241817	21208	-0.115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	44243434	44265412	10	1.4276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	9	44266854	141091394	45503	-0.0949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	72809	60854058	37973	-0.0945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	60855902	60865856	7	-2.5614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	60866270	67073996	3994	-0.1028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	67079067	67080369	2	-3.3406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	67080563	68082739	781	-0.1606
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	68084791	68122532	25	-1.0863
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	68122644	72755123	2898	-0.0921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	72755154	72756330	2	3.3577
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	72757433	73825952	733	-0.09
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	73831406	73832859	2	-7.5064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	73833355	94116891	12660	-0.1026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	94119961	94384252	104	0.4491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	94389088	131180639	23847	-0.1022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	131182373	131182938	3	-3.4592
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	131183685	133650773	1815	-0.1112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	133651344	133651613	2	-4.6904
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	10	133652765	135506704	762	-0.061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	198572	3162394	1074	0.0388
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3164791	3165412	3	-4.1007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3165555	3174177	7	-1.1657
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3175685	3644307	173	-0.0452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3644682	3678678	27	0.7993
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	3679658	4970243	987	-0.0475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	4970277	4974029	23	-2.3696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	4975164	9807125	3403	-0.0291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	9809956	9811616	4	-2.9613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	9811699	11087059	859	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	11088484	11089090	2	4.0451
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	11090620	34218858	15809	-0.0304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	34220504	34221249	3	-3.1703
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	34221453	55670390	10519	-0.019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	55676025	55676299	2	4.4531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	55676899	64311848	4610	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	64312153	64312403	2	-5.9901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	64313291	83779426	10332	-0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	83784487	83787395	2	-3.0827
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	83788474	88378528	2975	-0.029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	88380349	88380618	5	3.0557
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	11	88382118	134944770	31293	-0.0205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	150442	658422	267	0.1745
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	658656	661656	4	-1.2411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	661981	11219423	6539	-0.0578
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	11220724	11241532	12	-1.7279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	11251874	32045943	13877	-0.0237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	32048482	32067902	14	1.2193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	32068015	45960118	6274	0.0269
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	45961774	45962417	6	-3.3281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	45962727	131825359	52531	0.0372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	131825691	131825755	2	-6.9381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	12	131833210	133778189	790	0.1742
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	19026949	30212446	7378	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	30212940	30213039	2	-3.9833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	30213872	40926654	7371	-0.0144
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	40930271	40938668	2	-4.2174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	40939330	43775704	1761	-0.0259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	43776912	43777338	3	2.9876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	43781811	55200147	6800	-0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	55202372	55202460	2	-3.5715
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	55203438	62094787	3815	-0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	62105931	62106608	2	-3.1419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	62106931	64678749	1370	-0.0229
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	64679636	64679784	2	3.3491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	64682680	71275421	4045	-0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	71275640	71277509	5	-3.8213
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	13	71280034	115108397	28284	-0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	19002124	20200409	84	-0.0738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	20201117	20420239	100	-0.6325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	20422583	33976917	8283	-0.0609
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	33977512	33978418	3	-4.0523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	14	33978506	107285437	43895	-0.0915
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	15	20016328	102469040	48957	-0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	60777	356250	142	0.3873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	357140	360317	5	-2.1685
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	360932	11594874	7875	0.0342
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	11595821	11598973	2	3.667
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	11600230	12610445	633	0.0789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	12610897	12611712	5	-3.0714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	12611773	18040800	3120	0.1045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	18043003	18043332	2	-4.1338
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	18044497	19404781	500	0.1415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	19406922	19410417	3	-1.8979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	19413986	22442020	1559	0.1012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	22557932	22703862	70	-0.7921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	22704520	86668167	33477	0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	86668473	86672285	4	-3.7003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	16	86672941	90287535	1750	0.0654
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	526	5120272	2498	0.1514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	5124908	5138513	2	8.5409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	5141800	18358946	8147	0.064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	18358949	18465221	27	-1.4365
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	18469197	43333156	10921	-0.0304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	43334978	43336687	2	-5.8635
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	43338941	44204373	461	0.0409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	44208144	44208674	3	-2.7817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	44212428	44246624	34	0.2443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	44246962	44364170	54	-0.2279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	44394412	44722842	42	1.2549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	44737622	54703649	5920	0.0484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	54704829	54704855	2	-3.2381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	17	54705038	81049726	14286	0.0654
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	11543	6040997	4067	0.0406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	6041594	6043025	2	-3.1286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	6043257	8641331	1867	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	8642003	8642189	2	-4.0985
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	8643302	22568796	6067	0.0142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	22571053	22571398	2	-3.4187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	22572537	30111443	4608	-4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	30114378	30114732	2	3.1025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	30115320	38258070	4972	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	38258082	38276400	43	0.7177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	38276674	44297181	3759	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	44297870	44297911	2	-4.5105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	44300315	68050849	15865	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	68051473	68164774	65	0.5753
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	18	68165049	78014582	6708	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	19	90910	20608574	8302	0.063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	19	20610277	20721462	64	-0.8621
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	19	20723845	59097854	19037	0.0572
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	61305	1568083	1116	0.1028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	1570737	1593893	33	2.1538
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	1597946	61014436	37974	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	61014681	61018055	4	-6.1337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	20	61018265	62956153	684	0.0686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	21	10736871	48096957	22997	0.0447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	22	16052528	50294740	21561	-0.0414
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	22	50294842	50297435	3	-3.8404
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	22	50301852	51234455	336	0.1831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	X	168477	155182354	80727	-0.0502
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	2650438	24663599	7608	-1.0299
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	24740869	25106855	31	-2.1595
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	25159666	25824699	68	-1.0936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	25825092	26598702	254	-1.7651
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	26604818	26825375	42	-2.7773
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	26921276	27190752	39	-1.4759
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	27224321	27240184	2	-5.6962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	27254679	28117880	263	-1.7877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	28137660	28272116	25	-0.9623
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	28277692	28321752	13	-1.8612
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D09_228824	Y	28322019	59018259	221	-0.9712
