Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	51598	18679771	9275	0.0272
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	18680879	18684763	5	-5.4543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	18684903	72543731	30859	0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	72543955	72591478	50	-1.0713
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	72592615	87483465	9229	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	87484208	87484844	4	-5.4212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	87487803	88438593	695	0.0198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	88438633	88442559	2	-3.8586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	88442597	201567539	54330	0.0153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	201569948	203004140	955	3.118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	203007855	221700168	12091	0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	221701053	221701815	3	-3.272
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	221701960	224656369	1652	0.0141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	224656456	224657036	3	-4.0262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	1	224657058	247191011	15027	0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	2784	123072621	72066	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	123072711	123072885	2	-5.5833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	123072955	238043215	67656	-0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	238043818	238044773	3	-4.2675
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	238045749	242163554	2269	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	242163769	242164778	2	-5.2366
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	2	242166443	242738129	170	0.1226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	35345	144422936	85962	0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	144423207	144426014	3	-3.7071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	144429239	163990886	11617	0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	163990962	164106591	69	0.9009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	164108674	172063199	4398	0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	172063750	172065112	2	-4.3366
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	172067728	194361700	13828	0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	194363167	194365597	13	-1.7322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	3	194369129	199380515	2532	0.0831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	2281	2713781	1006	0.0367
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	2713885	2714087	2	-6.1584
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	2714319	9819488	4337	-0.0134
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	9823258	9840596	29	-2.1306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	9843312	54408905	25943	0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	54409510	55450472	906	1.2496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	55454561	57491902	1125	0.3173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	57492946	57493289	2	-3.6887
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	57495978	69054598	6797	0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	69057536	69171930	65	-1.9099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	69187710	115393149	26431	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	115394772	115403839	30	1.0312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	4	115405272	191261904	45151	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	68532	31589967	20760	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	31590090	31590222	3	-5.3792
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	31595046	125160917	52658	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	125162142	125162564	5	-3.5507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	125164470	133159028	4475	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	133159372	133159611	2	-3.484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	133162976	140198906	3793	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	140204020	140221211	11	-1.8203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	140222663	168652669	18332	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	168653626	168653770	2	4.0811
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	5	168655237	180722926	7102	0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	94661	31039038	20724	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	31046862	31048366	2	-5.8371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	31048548	31454801	255	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	31455795	31456449	6	-1.6876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	31456559	32515131	390	0.1156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	32516505	32520570	8	1.4912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	32535726	33082321	295	-0.0945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	33082992	33083235	2	4.2211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	33084550	72086412	21170	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	72090767	72091913	3	2.7486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	72093997	72919646	551	0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	72923245	72923593	2	-3.4035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	72925284	73272496	229	-0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	73275159	73278784	4	-2.2471
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	73284516	79019608	3462	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	79025784	79084234	105	-0.6104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	79084489	81334706	1375	0.0308
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	81340908	81351641	38	-0.7459
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	81351822	118222885	21844	0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	118223175	118223516	2	-5.9658
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	6	118223768	170892930	33372	0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	52911	29478177	20166	0.3886
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	29478611	29483705	6	-2.3614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	29483880	54906910	16758	0.3747
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	54908849	55091046	162	3.6111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	55094406	55098494	14	5.3847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	55100497	55153329	101	3.8398
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	55153384	55298042	160	3.1699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	55301414	55345979	30	3.9487
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	55355282	142154515	46142	0.3897
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	142156294	142159298	8	1.9375
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	142159383	142165614	19	1.1796
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	7	142165684	158819765	9924	0.3725
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	21254	2295570	1601	-0.0202
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	2298560	2310208	22	-1.5898
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	2318174	6814172	5589	0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	6814411	6814609	6	-2.9539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	6820778	8776278	934	0.059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	8776866	8776924	2	-5.4037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	8784561	15700057	5280	0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	15700433	15700499	2	-4.967
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	15701067	25027558	6961	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	25030360	25040250	27	-1.9811
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	25047021	65011190	21667	0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	65011451	65011672	6	2.8496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	65012064	65350191	180	-0.0456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	65354940	65356169	5	-2.152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	65357482	73569240	4632	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	73569801	73570378	3	-2.9785
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	73571799	112363470	22290	0.013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	112363642	112364436	7	-2.052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	112370428	139296210	18067	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	139297044	139300787	2	-4.8789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	8	139301553	146268959	3573	0.0313
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	36587	6967843	6187	0.0357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	6967864	6968321	3	-1.6372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	6968691	9381051	2219	0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	9383043	9383275	4	-2.6493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	9383437	21605699	9655	-0.4168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	21607466	21636019	20	-1.5818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	21642626	21645859	4	-5.8102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	21646282	22282707	429	-1.4567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	22283166	32107175	6810	-0.1223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	32111137	32117551	2	-3.4325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	32120986	32191266	47	-0.1261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	32193285	32193554	4	-4.3318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	32194658	44667855	4188	0.0333
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	44669747	44795733	34	1.1198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	44813196	75762746	4245	0.035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	75763827	75765561	3	-2.9865
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	75765701	95388818	13202	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	95388840	95393568	4	-3.1866
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	95396400	100331896	2986	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	100333203	100353877	16	-0.9933
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	100356545	110594570	7132	0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	110594809	110594902	3	-5.3018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	9	110595461	140211215	17886	-8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	62809	1393965	749	-0.0762
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	1394314	1394665	4	-4.1854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	1396364	26350685	18504	-0.1155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	26351223	26352830	3	-4.3318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	26353343	46111486	10345	-0.1186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	46337321	46351595	3	-3.8568
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	46352201	46374563	11	0.5198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	46376660	46510869	110	-0.2517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	46514311	46519875	7	-3.1507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	46520662	65368946	11234	-0.4605
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	65369345	65369485	2	-5.3669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	65370807	71384246	3871	-0.5143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	71384543	71386515	5	-4.283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	71386539	131447233	38108	-0.5133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	131448641	131449130	2	-6.0352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	131449225	135040348	2139	-0.5152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	135040419	135040560	2	-4.2056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	135044880	135067165	11	0.7234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	10	135071762	135356694	151	-0.4019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	188572	1979288	575	0.0303
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	1979380	1981259	3	-4.6025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	1984664	4747140	1516	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	4747151	4747687	4	-3.207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	4749933	67527195	36581	0.0138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	67531677	67538145	5	-3.1049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	11	67542131	134449982	43348	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	20703	44248563	26984	0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	44248664	44248684	2	-6.3922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	44248994	70542569	15181	0.0161
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	70546315	70550501	2	4.5513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	70550650	125945574	33732	0.0139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	125946197	125946307	2	-3.7372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	125947522	130391312	3578	-0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	130391644	130391708	2	-6.9771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	12	130399163	132288262	794	0.0862
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	17924949	45714788	18345	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	45715123	46210238	304	-0.59
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	46213985	46214669	2	-5.1797
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	46214909	53229424	4035	-0.5039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	53230973	53231621	3	-4.3712
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	53233770	59747331	3607	-0.5226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	59747493	59750277	2	-5.9546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	13	59753565	114126499	34386	-0.137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	18072124	18730853	47	0.2922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	18759317	20272176	684	-0.5268
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	20272473	20272845	2	-6.7959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	20273172	23974165	2230	-0.4664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	23974442	23977887	2	-5.7936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	23977957	33047263	5485	-0.5185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	33047291	33048169	3	-6.8559
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	33048257	33665624	468	-0.4958
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	33667064	33669097	2	-4.6904
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	33669960	34230598	344	-0.4055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	34230611	34246481	2	-3.9398
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	34248919	43926993	5623	-0.534
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	43929685	43930148	2	-4.8574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	43931394	53646340	5617	-0.5104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	53650539	53652084	3	-4.6578
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	53652937	59127433	3579	-0.5187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	59130078	59130489	2	-6.205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	59143235	64789252	3381	-0.5031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	64789423	64789483	2	-5.6761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	64789558	87896235	14097	-0.5107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	87896435	87896594	2	-6.2664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	87899058	98223095	6734	-0.5181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	98225899	98226321	2	-6.2664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	98226427	100247820	1263	-0.5504
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	100248975	100249045	2	-6.4931
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	14	100249362	106356482	2577	-0.4754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	18276341	22011919	1283	0.2239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	22012811	22013039	2	-2.4805
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	22013284	22198236	79	-0.0816
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	22199087	22225844	6	-1.7547
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	22225980	22388926	97	0.2221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	22389552	22389729	2	-4.662
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	22389978	58369556	21404	0.0163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	58370844	58379441	5	-2.6832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	58380560	63379498	3240	0.0406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	63379560	63379804	2	-3.7829
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	15	63383166	100286563	22802	0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	16	777	22096040	13698	0.0507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	16	22096138	22104944	4	2.3716
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	16	22106019	76926961	25714	0.0235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	16	76928999	76942239	17	-1.877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	16	76942266	88815036	9770	0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	526	5060996	2498	0.1164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	5065632	5079237	2	7.8262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	5082524	36675234	17132	0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	36676540	36676736	8	2.9606
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	36676783	36686771	24	0.8943
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	36686792	41557232	2377	0.0471
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	41560151	41564451	4	-2.6501
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	41568205	52058648	6051	0.0514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	52059828	52060037	3	-3.2132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	52060188	75865249	13183	0.038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	75866022	75867577	3	3.5472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	75868466	76473705	341	0.0551
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	76478624	76479344	2	-4.4011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	17	76479561	78643088	734	0.0397
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	1543	270325	81	0.1199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	270443	278395	17	1.1167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	280295	9696708	6495	0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	9699481	9700479	2	4.6516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	9700500	42551179	18776	0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	42551868	42551909	2	-4.7315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	42554313	42589145	19	0.0301
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	42590189	42592243	2	-4.9426
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	42593925	69678634	18309	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	69679190	69680708	3	-3.3245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	18	69681921	76115554	4290	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	19	41910	63789666	27377	0.0499
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	20	9305	62426597	39775	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	21	9758742	24293595	7446	0.0308
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	21	24303999	24304139	2	-3.7624
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	21	24304809	39345834	10566	0.0199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	21	39346824	39347284	3	-4.1469
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	21	39348199	46921385	4960	0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	22	14432528	47203379	20467	0.0412
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	22	47208708	47209058	2	-5.3371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	22	47210207	49581321	1437	0.0391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	X	108477	154835548	80808	-0.0488
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	Y	2710438	22126072	7261	-0.8556
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	Y	22126302	22305793	91	-0.1477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	Y	22364162	23193179	223	-0.8804
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	Y	23281531	23683305	33	-1.9069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D11_228856	Y	23765351	57427647	920	-0.5062
