Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	51598	10653939	4989	-0.0326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	10659021	10662450	2	-4.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	10663213	16182690	2826	-0.0357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	16182696	16182875	2	-5.0984
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	16184968	18679771	1443	-0.0352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	18680879	18684763	4	-4.2641
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	18684903	72535958	30809	-0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	72541006	72583721	47	-1.2374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	72583736	84305720	7253	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	84306260	84306347	2	-4.4793
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	84307107	156157150	27685	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	156158189	156158689	5	-4.5979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	156163526	156694175	345	-0.0466
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	156699432	156699698	4	2.1459
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	156700919	179158033	14806	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	179159575	179161780	4	-3.9537
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	179161863	224656369	28798	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	224656456	224657036	3	-4.6265
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	224657058	228518035	2286	0.0142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	228518946	228519075	2	3.2208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	228520220	233130396	3425	0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	233130435	233134754	4	-3.2242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	233135392	240370557	5087	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	240371271	240372233	2	-4.5537
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	240376669	244724622	2846	0.014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	244730657	244730754	2	3.1051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	1	244730903	247191011	1357	0.0334
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	2	2784	171275214	100251	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	2	171275883	171289587	5	-2.9264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	2	171291016	242163554	41753	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	2	242163769	242164778	2	-5.2758
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	2	242166443	242738129	173	-0.0338
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	35345	4442526	3699	0.0339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	4443080	4444949	2	-4.6494
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	4445714	7143913	2145	0.0236
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	7145741	7146036	2	-3.3292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	7147721	46694366	25361	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	46696215	46696666	4	-1.8321
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	46697177	46917189	108	-0.4365
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	46922091	46923530	2	-2.6334
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	46924034	68814718	13768	0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	68828854	68830103	15	1.0849
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	68831448	97786578	13892	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	97790348	97811060	13	-1.0862
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	97813052	124335019	15305	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	124336495	124336747	2	-3.9315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	124340260	131177728	3833	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	131178404	131181393	3	-3.5403
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	131182048	194356356	37709	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	194356398	194365597	23	-1.574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	3	194369129	199380515	2534	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	2281	7372011	3887	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	7374351	7380568	4	-4.3933
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	7384053	9819488	1444	-0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	9823258	9839895	23	-2.2083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	9839910	69057550	34780	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	69057755	69219747	68	-2.017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	69222620	78385920	5051	0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	78386627	78387114	3	2.3864
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	78387881	78411972	41	0.0253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	78412770	78413233	4	1.8076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	78413400	84919969	3810	0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	84920117	84921431	2	-2.4006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	84922655	89011883	2500	0.0209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	89012264	89013032	2	-7.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	89016124	154384255	37151	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	154384279	154389585	3	3.8244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	4	154390482	191261904	23071	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	68532	21636658	14932	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	21636837	21637086	2	3.7528
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	21644824	31134877	5423	-0.021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	31136014	31136858	4	-2.0905
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	31137311	34059704	1998	0.0178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	34060412	34060511	2	2.7607
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	34061030	46306865	6815	0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	46307687	46309259	6	-2.6413
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	46349104	56022507	4001	0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	56022953	56023174	3	2.6399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	56023338	84772585	16192	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	84779642	84779829	2	-4.3917
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	84784298	88750822	2004	-0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	88750928	88760802	3	-2.3466
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	88766902	95424497	3468	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	95425634	95425754	2	-2.8611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	95428432	103534656	4524	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	103537679	103562025	22	-0.9052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	103563387	140198906	22262	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	140204020	140223940	13	-1.5273
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	140232347	150992139	6747	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	150993505	150993667	2	-3.3287
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	150996293	157638306	4348	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	157641785	157643342	2	-3.3653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	157643399	176017774	12070	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	176018076	176019344	3	-2.854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	5	176025075	180722926	2262	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	94661	276879	137	0.0343
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	279179	325821	59	0.6733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	326149	6586018	4870	0.0141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	6586034	6587404	2	-4.4797
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	6587794	79019608	42030	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	79025784	79091904	111	-0.5543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	79095953	80232565	669	-0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	80233008	80235111	7	1.4672
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	80236839	81334705	691	0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	81334706	81345561	33	-0.856
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	81346253	81595044	170	-0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	81599877	81599892	2	2.4016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	81603129	82155320	372	0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	82156599	82156977	2	-1.7175
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	82163658	82389621	152	0.1071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	82398726	82400134	3	2.8344
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	82400305	83600394	692	0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	83600448	83602745	4	-3.1253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	83603452	134672093	30448	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	134672274	134672863	7	-2.4323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	6	134677543	170892930	23383	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	7	52911	142154515	83347	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	7	142156294	142159071	5	1.9794
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	7	142159107	142186562	28	0.9516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	7	142188690	158819765	9870	0.0141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	21254	6813673	7208	0.0358
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	6813700	6814596	10	-3.2076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	6814609	8542335	728	0.0884
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	8543781	8543911	3	-5.9781
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	8544624	25030360	12445	0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	25030393	25040250	26	-1.7197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	25047021	52803335	14027	0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	52805355	52805704	2	-2.7932
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	52806631	65011190	7638	0.0163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	65011451	65011672	6	2.6345
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	65012064	112360670	27126	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	112363455	112364436	9	-1.7018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	112370428	142570672	20249	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	142572775	142572858	2	-6.2611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	142573179	143486516	485	-0.0235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	143486624	143488721	4	-4.6957
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	8	143489377	146268959	867	0.0547
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	36587	1704072	1721	0.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	1704233	1704649	2	-4.6112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	1704764	123368354	64772	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	123369962	123383414	7	-2.293
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	123383521	132755477	5058	-0.0242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	132755829	132756366	2	-3.9769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	132757306	137358684	2523	-0.0309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	137358972	137359537	2	-4.7474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	137359564	137543527	96	0.0376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	137544376	137546386	3	-3.6399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	137550079	137760947	87	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	137761268	137783741	2	-3.4993
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	9	137784024	140211215	796	-0.0162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	62809	7082065	5665	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	7082276	7082762	2	-5.7909
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	7085790	12840957	4303	0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	12841507	12841528	2	-5.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	12844670	16859862	3172	0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	16860778	16861362	2	-3.4438
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	16862832	18282256	747	0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	18282310	18296880	10	1.23
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	18297176	24415269	4089	0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	24417680	24417927	10	-2.4099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	24418060	118528689	56073	0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	118528774	118529353	3	-3.5337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	118530448	121042723	1608	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	121044316	121065628	16	-1.0808
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	121067870	129115786	5778	0.0174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	129118258	129119909	2	-5.9518
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	10	129120769	135356694	4082	0.0356
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	188572	11043635	6551	-0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	11045060	11045666	2	5.0909
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	11047196	11322546	318	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	11322567	11322906	2	-3.542
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	11323483	55426966	25999	-0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	55432601	55432875	2	4.9125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	55433475	69630458	6805	-0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	69632060	69636831	6	-2.6877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	69638251	70199039	281	0.0206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	70200275	70201641	4	-2.9805
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	70202195	88018176	10752	-0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	88019997	88020266	5	2.871
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	11	88021766	134449982	31239	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	12	20703	51039112	30501	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	12	51040128	51041608	2	-5.7563
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	12	51044191	118065370	41080	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	12	118065514	118066215	2	-5.2114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	12	118072336	132288262	8652	0.0141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	17924949	23691489	3598	0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	23692987	23696565	4	-4.0319
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	23697169	79575150	35078	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	79575903	79576015	2	-4.5356
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	79579595	89276372	5640	-0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	89278384	89285156	2	4.2327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	89289160	92805108	2209	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	92806062	92807313	3	-4.5516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	13	92807479	114126499	14231	0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	14	18072124	94152503	45484	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	14	94152869	94153132	2	-5.7025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	14	94154155	106356482	6885	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	18276341	18466953	47	-0.1132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	18476969	20002813	341	0.5326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	20005237	28047215	4392	0.0555
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	28051284	28051655	2	2.7861
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	28052213	63345189	21324	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	63349485	63353319	3	-2.645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	63361862	65035001	964	-0.0429
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	65035407	65036351	5	-5.3602
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	15	65041133	100286563	21809	-0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	777	1006398	364	0.0472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	1013516	1013553	2	-6.1385
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	1029950	5521699	1983	-0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	5523319	5525658	4	-3.2123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	5525853	76928999	36999	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	76929109	76942239	16	-2.2128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	76942266	82635005	5899	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	82638270	82638394	2	-4.0883
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	82639964	83528924	705	-0.0374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	83529086	83531624	2	-5.0368
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	83533361	85079214	1219	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	85079748	85079989	3	2.4303
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	16	85080374	88815036	1894	-0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	526	17954528	10420	-0.024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	17957825	17959081	4	-3.3176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	17959142	29858052	5805	-0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	29861005	29861106	2	4.0386
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	29862528	36675234	3362	-0.0278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	36676540	36684057	24	1.4411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	36686250	44909915	3901	-0.0281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	44914459	44915971	2	-4.3769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	44921410	70462522	15095	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	70464383	70464418	2	-4.3421
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	70465232	70800891	126	-0.0644
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	70805947	70808148	3	-2.8868
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	70808548	72756485	895	-0.0491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	72756611	72758536	4	-5.1403
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	17	72758874	78643088	2649	-0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	1543	556905	337	0.0882
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	557127	558040	3	-3.7669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	558101	32420153	18674	0.0131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	32423058	32423155	2	3.4548
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	32423351	41632119	5867	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	41635463	41635799	2	-3.5363
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	41639020	43385810	977	-0.0341
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	43386079	43386518	2	3.3992
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	43388326	43498294	63	-0.067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	43498917	43499863	2	-3.0391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	43506455	52895843	6115	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	52896404	52897516	4	-3.4085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	52897546	73193849	14243	0.0209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	73195006	73195139	2	-3.5684
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	18	73195921	76115554	1734	0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	41910	1540387	314	0.0638
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	1550869	1627841	12	-1.698
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	1631987	4990135	901	-0.0969
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	4992178	4997070	2	-6.7653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	5001133	15642246	4854	-0.0438
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	15642357	15651085	7	-2.4325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	15652664	38869610	8512	-0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	38870322	38871690	2	3.9311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	38872565	59188990	10135	-0.0333
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	59189513	59190388	2	-4.9143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	59191239	60974181	849	-0.0406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	60974347	60974879	3	-2.5816
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	19	60978105	63789666	1714	-0.0138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	20	9305	1518737	1115	-0.0373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	20	1518752	1541893	32	-1.1213
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	20	1545946	62426597	38613	-0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	21	9758742	42939842	20860	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	21	42944708	42945514	2	-3.3484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	21	42948499	46921385	2098	0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	22	14432528	49581321	21828	-0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	108477	588726	71	0.1315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	599203	602858	4	-1.351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	602861	2722915	31	0.1164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	2723139	2725324	5	-4.7499
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	2726141	7744677	3622	-0.0489
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	7745098	7749103	2	-5.8789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	7750896	75105884	33937	-0.0386
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	75105998	75106177	2	-5.9975
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	75106436	136231279	32065	-0.0452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	136237331	136238409	4	-4.3138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	136239027	137401436	679	-0.041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	137401740	137403506	5	-3.4174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	137403901	142116476	2942	-0.0301
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	142116982	142118553	3	-5.2539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	X	142120701	154835548	7370	-0.0253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	2710438	22063159	7254	-0.9239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	22093119	22305793	96	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	22364162	22418650	29	-0.8849
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	22426993	22432459	5	0.6002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	22479572	23193179	189	-0.9893
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	23281531	23601019	31	-2.239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	23634693	24138455	52	0.09
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_D12_228872	Y	24139905	57427647	870	-0.5334
