Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	3208470	18679771	7718	-0.0411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	18680879	18684255	3	-3.6194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	18684763	21735954	1684	-0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	21736543	21739471	5	-2.9047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	21745589	245880329	111998	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	474222	6381092	3179	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	6382484	6382837	2	-5.3009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	6382925	20626407	9153	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	20627392	20631728	3	-4.1677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	20632164	242124735	112030	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	2187571	14436526	6854	-0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	14438969	14439015	2	-4.1068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	14439299	124335019	56829	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	124336495	124336747	3	-3.297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	124340260	130616153	3421	-0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	130617100	130617125	3	-4.1735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	130619118	199023074	33694	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	1043934	4607436	1295	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	4609699	4610135	2	4.81
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	4611641	17076724	8159	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	17077019	17086754	11	-1.4894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	17088206	56186644	19574	-0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	56188162	56188796	3	2.456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	56198583	79501783	11703	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	79502667	79504423	2	3.2461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	79507718	189836143	56999	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	967233	2632136	634	0.0228
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	2632462	2633144	2	3.3624
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	2633455	6564314	3053	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	6571438	6571618	2	-3.7564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	6571858	8108690	1075	0.0257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	8110974	8112421	4	-2.1901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	8113276	56022507	23326	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	56022953	56022987	2	3.3184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	56023174	59053199	1933	0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	59053652	59053824	3	2.6388
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	59064610	168449379	59008	-0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	168449534	168449600	2	3.3047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	168450265	173056118	2790	-0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	173057108	173057601	3	-3.076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	173061074	177786138	2230	-0.0303
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	177789114	177789211	2	-3.2515
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	177789955	180293075	1188	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	959281	44548700	24403	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	44553424	44555576	4	-3.7814
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	44557194	53615325	5219	0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	53615586	53616286	4	-3.6483
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	53616631	82389621	12656	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	82398726	82400134	3	2.7847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	82400305	170745844	48863	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	7	671810	158077879	76998	0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	607667	3307156	1174	-0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	3307824	3308045	2	-5.9477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	3308063	41509670	21203	-0.0113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	41510290	41510745	2	3.1878
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	41515724	68600374	12024	-0.0099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	68601598	68602351	2	-5.5613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	68605301	115511597	25209	0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	115511850	115511898	2	-3.2541
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	115517618	145304484	17687	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	779932	32107175	18160	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	32111137	32117551	2	3.986
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	32120986	71914120	5070	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	71914869	71915079	3	-2.5776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	71916191	121526044	31513	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	121526167	121526309	2	-6.2119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	121526737	129899012	4766	-0.0324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	129899153	129913249	11	-1.4279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	129913284	138438814	3992	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	138438950	138439890	2	-5.0649
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	138440750	140058573	385	0.0466
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	405240	85630421	46828	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	85632462	85632625	2	6.4258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	85632728	97902475	6983	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	97903368	97903413	2	-4.6339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	97904267	99119121	812	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	99122073	99130208	3	-2.6258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	99130303	112488001	7459	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	112488296	112488320	2	-3.1563
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	112488333	135075077	13905	-0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	11	446120	133647740	72758	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	760163	82687040	43199	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	82689745	82689869	4	-2.5794
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	82690639	113338061	17661	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	113339379	113341562	4	-2.8373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	113341666	131665411	8882	-0.0233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	13	18348806	114005560	53595	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	14	19571208	94041708	40582	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	14	94041731	94041995	2	4.7239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	14	94042056	105059083	6017	-0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	15	21238778	36734366	6895	-0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	15	36737521	36738198	2	-5.9511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	15	36738864	99701830	34969	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	593460	80474139	34229	-0.0189
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	80474684	80479981	2	-5.7772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	80480314	85224403	3041	-0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	85225668	85229786	5	-2.0408
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	85230442	87907437	1010	0.0202
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	933971	5060996	1639	-0.0351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	5065632	5079237	2	8.3121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	5082524	28846569	10384	-0.033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	28847175	28847221	2	-4.8003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	28849229	78510305	22568	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	18	319586	75210228	40317	-0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	19	235018	63570038	22234	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	403764	18240818	10932	-0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	18242270	18243259	2	-3.3617
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	18243920	60447795	23622	-0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	60447831	60451450	5	-2.6603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	60451660	61354341	265	0.0224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	61370626	61370750	2	-3.2589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	61370955	61690281	71	0.1813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	21	14269492	46502723	19391	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	15803930	45414760	14018	-0.0367
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	45415115	45416745	2	3.8533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	45417951	45780362	238	-0.0113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	45780734	45781228	2	-3.7452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	45781888	47203379	1104	-0.0388
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47208708	47209058	2	3.242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47210207	47717016	319	-0.0541
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	X	3167107	154558783	60757	-0.0522
