Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	3218610	18807184	7717	-0.0411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	18808292	18811668	3	-3.6194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	18812176	21863367	1683	-0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	21863956	21866884	5	-2.9047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	1	21873002	247813706	112038	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	484222	6463641	3179	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	6465033	6465386	2	-5.3009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	6465474	20762926	9152	0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	20763911	20768247	3	-4.1677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	2	20768683	242476062	112025	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	2212571	14461522	6853	-0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	14463965	14464011	2	-4.1068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	14464295	122852329	56827	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	122853805	122854057	3	-3.297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	122857570	129133463	3421	-0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	129134410	129134435	3	-4.1735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	3	129136428	197538677	33693	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	1053934	4556535	1295	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	4558798	4559234	2	4.81
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	4560740	17467626	8159	0.0114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	17467921	17477656	11	-1.4894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	17479108	56491887	19573	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	56493405	56494039	3	2.456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	56503826	79282759	11701	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	79283643	79285399	2	3.2461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	4	79288694	188763651	57004	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	914233	2579136	634	0.0228
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	2579462	2580144	2	3.3624
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	2580455	6511314	3054	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	6518438	6518618	2	-3.7564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	6518858	8055690	1076	0.0257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	8057974	8059421	4	-2.1901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	8060276	55986750	23323	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	55987196	55987230	2	3.3184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	55987417	59017442	1933	0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	59017895	59018067	3	2.6388
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	59028853	168516801	59007	-0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	168516956	168517022	2	3.3047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	168517687	173123512	2790	-0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	173124502	173124995	3	-3.076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	173128468	177853532	2231	-0.0302
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	177856508	177856605	2	-3.2515
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	5	177857349	180360469	1188	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	1014281	44440722	24404	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	44445446	44447598	4	-3.7814
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	44449216	53507366	5220	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	53507627	53508327	4	-3.6483
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	53508672	82332902	12657	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	82342007	82343415	3	2.7847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	6	82343586	170903919	48868	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	7	705284	158385118	76999	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	617667	3319748	1175	-0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	3320416	3320637	2	-5.9477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	3320655	41390513	21202	-0.0114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	41391133	41391588	2	3.1878
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	41396567	68437820	12025	-0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	68439044	68439797	2	-5.5613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	68442747	115442421	25215	0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	115442674	115442722	2	-3.2541
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	8	115448442	145232496	17686	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	789932	32117175	18163	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	32121137	32127551	2	3.986
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	32130986	72724300	5072	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	72725049	72725259	3	-2.5776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	72726371	122486223	31520	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	122486346	122486488	2	-6.2119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	122486916	130859191	4766	-0.0324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	130859332	130873428	11	-1.4279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	130873463	139318993	3992	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	139319129	139320069	2	-5.0649
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	9	139320929	140938752	385	0.0466
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	415240	85640441	46829	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	85642482	85642645	2	6.4258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	85642748	97912485	6981	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	97913378	97913423	2	-4.6339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	97914277	99129131	812	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	99132083	99140218	3	-2.6258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	10	99140313	135225087	21366	-0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	11	456120	134142530	72750	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	889902	84162909	43196	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	84165614	84165738	4	-2.5794
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	84166508	114853678	17661	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	114854996	114857179	4	-2.8373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	12	114857283	133155338	8881	-0.0234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	13	19450806	114987458	53591	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	14	20501368	94971955	40580	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	14	94971978	94972242	2	4.7239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	14	94972303	105988038	6017	-0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	15	23687685	38947074	6897	-0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	15	38950229	38950906	2	-5.9511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	15	38951572	101884307	34966	-0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	653459	81916638	34179	-0.019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	81917183	81922480	2	-5.7772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	81922813	86666902	3041	-0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	86668167	86672285	5	-2.0408
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	16	86672941	89379936	1010	0.0202
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	987221	5120272	1639	-0.0351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	5124908	5138513	2	8.3121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	5141800	31822456	10384	-0.033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	31823062	31823108	2	-4.8003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	17	31825116	80917016	22568	-0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	18	329586	77109240	40315	-0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	19	284018	58878226	22234	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	455764	18292818	10933	-0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	18294270	18295259	2	-3.3617
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	18295920	61014400	23622	-0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	61014436	61018055	5	-2.6603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	61018265	61883896	265	0.0224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	61900181	61900305	2	-3.2589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	20	61900510	62219837	71	0.1813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	21	15347621	47678295	19391	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	17423930	47036096	14017	-0.0365
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47036451	47038081	2	3.8533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47039287	47108355	41	0.1749
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47109525	47109621	2	-2.0266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47114521	47401698	195	-0.0298
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47402070	47402564	2	-3.7452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	47403224	48824715	1104	-0.0388
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	48830044	48830394	2	3.242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	22	48831543	49331012	319	-0.0541
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E02_228714	X	3157107	154905589	60773	-0.0525
