Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	51598	72535958	40030	-0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	72541006	72584492	49	-1.1687
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	72585028	100714962	17280	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	100715688	100716850	2	-6.3071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	100716969	108531282	4598	-8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	108535758	108539019	3	-3.7647
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	108540627	119341205	6606	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	119342242	119342898	3	-3.4174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	119353483	147291432	1952	0.0431
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	147303148	147521544	131	-0.6488
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	147523315	199602522	32477	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	199606003	199611269	3	-5.7852
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	199611531	209232971	6125	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	209235257	209235616	2	-4.8198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	209250691	238050986	18686	-9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	238054274	238055472	2	-5.5056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	1	238056371	247191011	5926	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	2784	36543597	24106	0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	36543613	36543746	2	-3.7517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	36545455	39976476	2220	-0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	39976736	39977408	2	-3.5772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	39982381	41858006	1510	0.0441
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	41858382	41858501	3	-4.3528
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	41859784	48700581	4417	-0.0201
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	48700601	48702019	3	-3.6203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	48702570	52597429	2649	0.0356
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	52607972	52612619	15	0.8059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	52617712	52618317	5	-0.4721
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	52618896	52635046	20	0.6098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	52641453	67335067	9065	0.0154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	67335137	67336108	2	-3.237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	67338236	71821516	2867	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	71825651	71829429	2	-4.7632
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	71835442	75607773	1971	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	75608415	75608492	2	-3.8695
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	75613279	129642267	27195	0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	129643322	129643447	2	-4.9317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	129644017	134782946	2783	-0.0133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	134783572	134784477	3	-2.6756
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	134784940	146581564	6970	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	146581653	146583404	17	1.6928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	146594865	241325937	55633	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	241333365	241341646	3	-4.1359
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	2	241341913	242738129	560	0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	3	35345	163995433	97441	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	3	163995786	164111308	71	0.737
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	3	164111337	199380515	20731	0.0163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	2281	1214753	485	0.0357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	1214811	1215795	2	-6.5883
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	1217469	8596046	4159	-0.0327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	8600106	8601826	2	-4.1436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	8602719	9819488	666	0.0311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	9823258	9844105	33	0.7395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	9844264	9953529	127	-0.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	9953722	9955648	3	-2.6306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	9956054	14706665	3587	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	14710727	14712027	6	-3.1825
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	14713655	78411972	36157	0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	78412770	78413019	3	-3.86
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	78413233	81410083	1774	0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	81410911	81419159	5	-2.3509
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	81421026	109108655	15817	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	109109572	109114461	4	-2.7372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	109116892	162093375	30565	0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	162093390	162104369	24	0.7967
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	162104408	162158278	46	0.1095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	162160371	162166209	6	-0.7359
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	162171678	162222716	40	0.6717
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	162226274	172613549	6259	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	172613832	172614351	8	-1.3447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	172616946	173224503	374	0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	173225723	173226108	12	-2.4159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	4	173232554	191261904	11491	0.0187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	68532	33395254	21882	0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	33398150	33400441	2	-6.1847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	33403067	46306865	7260	0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	46307687	46309259	6	-2.4562
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	46349104	54980019	3263	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	54980027	54984946	3	-2.19
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	54985601	56022507	732	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	56022953	56022987	2	-3.0554
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	56023174	57357403	828	0.0217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	57361784	57369290	32	1.5264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	57374114	134755570	44657	0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	134756766	134756796	2	-6.2371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	5	134757421	180722926	28324	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	94661	1290648	1022	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	1291541	1291561	2	-3.5729
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	1292118	10267403	6468	-0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	10267800	10268018	2	-4.6109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	10268028	32516505	13842	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	32516575	32681749	60	-0.615
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	32681992	44713044	7052	0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	44714285	44718731	7	-2.3564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	44723839	71783260	14111	0.017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	71783440	71785587	2	-5.4422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	71785723	80234090	5237	0.0348
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	80235084	80235111	2	-6.9221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	80236839	95616875	9457	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	95623707	95661828	27	-0.7921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	95663480	103844669	4595	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	103844732	103868754	44	-1.9419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	103872163	105658022	1045	-0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	105659163	105659500	2	-3.9706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	105661048	108162596	1603	-0.0129
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	108162613	108163203	2	-3.643
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	108166124	124928918	9733	0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	124929365	124936665	3	-3.2027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	124936772	125887089	619	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	125893844	125894320	2	-3.691
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	125898670	150454451	15109	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	150457870	150457895	2	-6.1147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	6	150460808	170892930	13632	-0.0099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	52911	3943744	1758	-0.0167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	3947089	3949179	2	-3.8736
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	3952294	38353968	24203	0.0139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	38357890	38369021	7	-2.9669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	38370912	43742828	3449	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	43753709	43803278	14	-0.8586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	43806009	48892774	3110	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	48896149	48896760	3	-4.0545
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	48899553	52841425	2791	0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	52841668	52842431	3	-3.1881
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	52842447	109229045	28420	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	109229196	109241218	8	-3.2066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	109241465	133435735	14035	0.0139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	133435751	133440983	22	-1.7031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	133446174	141407299	4894	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	141409163	141429438	20	0.8245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	141430653	142154515	446	0.1104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	142156294	142165614	27	1.178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	142165684	143906857	975	0.0212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	143907929	143909802	6	-1.3936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	143910061	148710918	2926	0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	148711082	148712130	4	-2.497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	148713654	149903299	553	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	149909308	149909447	2	-3.7143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	7	149911205	158819765	5406	-0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	21254	5115569	5108	0.0169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	5115655	5121323	5	-2.6484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	5123201	5591415	584	0.0391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	5591735	5591903	2	-3.9915
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	5594496	5827712	303	0.0826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	5833235	5833276	2	-5.4722
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	5833730	7174056	1300	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	7181231	7869055	179	0.6642
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	7869464	12278771	3052	0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	12284206	12487426	93	0.6019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	12517914	39349816	18316	0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	39354760	39506122	56	1.1977
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	39507456	40295884	533	-0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	40296986	40297388	2	-3.8352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	40297644	42572417	1495	-0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	42574236	42578255	2	-3.2359
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	42581039	69135334	13139	0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	69135461	69136776	5	-3.0834
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	8	69137326	146268959	46523	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	36587	15287028	13112	0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	15289715	15289791	3	-3.4182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	15290968	19975052	3734	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	19978975	19983846	2	-6.7119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	19984441	20016883	33	-0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	20018452	20018769	2	-4.4596
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	20019294	22878171	2007	0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	22879518	22880200	5	-2.573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	22881410	31522075	5986	0.0292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	31522212	31523362	2	-3.4712
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	31524673	32107175	448	-0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	32111137	32117551	2	-6.0686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	32120986	134071192	46900	0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	134071320	134072800	3	-3.6389
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	134075673	134588424	296	-0.0359
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	134589718	134592548	5	-3.688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	9	134593046	140211215	2445	-0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	62809	23246167	17185	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	23246252	23246309	2	-5.3611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	23249050	49628541	13494	0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	49629651	49633074	3	-3.6859
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	49633137	58182551	5520	0.0113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	58182861	58202995	44	-0.634
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	58206058	60270608	1441	0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	60270852	60274889	3	-3.8471
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	60276333	73381509	8533	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	73384493	73387239	3	-4.4591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	73387364	78509095	2583	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	78509649	78510305	3	-4.9156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	78510482	112852425	21294	-0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	112855333	112855667	2	-4.7711
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	112856650	126776036	9551	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	126777760	126778181	2	-5.5004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	10	126778314	135356694	5749	-0.0279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	188572	4229734	1628	-0.0231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	4232580	4232709	2	-5.924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	4252332	12153934	5924	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	12155884	12156032	2	-4.7957
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	12156242	21450259	6558	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	21453008	21476107	18	0.9238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	21476872	21513344	31	0.3941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	21515067	21981697	335	0.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	21982053	21982348	2	-3.8009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	21982465	45087111	15351	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	45088245	45088963	4	-3.3375
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	45089575	55426966	2940	0.0348
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	55432601	55432875	2	-4.1663
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	55433475	64068424	4573	0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	64068729	64068979	2	-5.0391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	11	64069867	134449982	44443	-0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	12	20703	9525137	5773	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	12	9529176	9619559	22	-1.9206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	12	9626236	128935280	72476	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	12	128935861	128936783	3	-3.9898
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	12	128937890	132288262	1838	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	17924949	36970036	12679	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	36970224	36982757	15	-2.382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	36986330	39892824	2067	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	39893912	39893987	2	-2.5756
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	39894549	42673704	1713	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	42674912	42675338	3	-4.103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	42679811	47638730	3103	-0.0223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	47640062	47640366	2	-4.6433
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	47647340	50584167	1733	0.0139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	50590160	50590549	2	-5.5967
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	50591509	56649097	3161	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	56656271	56676381	34	-0.8156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	56687715	61867245	2987	0.0259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	61870441	61888071	13	-1.1048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	61889287	71387378	5630	0.0372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	71393699	71393881	3	-3.328
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	71393957	89276372	11091	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	89278384	89285156	2	-5.8162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	89289160	95825574	4136	-0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	95832990	95833299	2	-5.7402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	95833378	97888838	1328	-0.012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	97889635	97893120	3	-4.7184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	13	97895547	114126499	10946	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	18072124	19270023	82	0.1412
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	19270221	19493212	104	0.6857
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	19494766	22335876	1945	0.0379
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	22337895	22337958	2	-4.6184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	22338244	38765898	9708	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	38768217	38769221	2	-6.8783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	38772080	51354542	7224	0.0304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	51354722	51354757	2	-2.7058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	51356024	56084686	3139	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	56086562	56086715	2	-4.8659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	56086782	62551326	3909	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	62551475	62551668	2	-4.8749
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	14	62552644	106356482	26151	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	18276341	32773035	7558	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	32773276	32773368	2	-4.4417
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	32774556	34284367	1014	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	34288652	34293330	3	-4.4797
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	34293385	34960439	452	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	34962040	34962248	2	-6.0751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	34963827	64677328	17740	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	64677538	64677958	2	-4.56
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	64678142	68249719	2247	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	68250006	68258331	3	-5.3584
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	15	68267668	100286563	19796	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	777	12089011	8264	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	12091585	12093311	2	-5.3532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	12095593	19251309	3911	0.0106
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	19252259	19265272	14	-1.031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	19268509	25864239	3745	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	25864405	25865741	2	-4.8706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	25869582	34317210	3202	-0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	34324072	34614572	169	0.5185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	34618468	79048819	22371	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	79049388	79050326	3	-4.3782
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	79051746	79990909	822	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	79992878	79994698	2	-5.6238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	79995869	81729663	1674	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	81731393	81733211	5	-3.6239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	16	81733312	88815036	4834	-0.0344
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	526	36675234	19577	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	36676540	36684057	24	1.7779
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	36686250	41623640	2423	-0.0233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	41625323	41627777	2	5.3512
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	41632160	53002905	6676	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	53007065	53011089	2	-4.5751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	17	53012014	78643088	13533	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	18	1543	6076758	4075	4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	18	6076900	6078451	3	-3.9155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	18	6078790	76115554	43862	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	41910	5602889	1490	-0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	5603572	5603700	2	-4.6362
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	5610865	8042027	1054	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	8043192	8043902	2	-5.7381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	8044264	49733658	17630	0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	49733700	49734605	4	-4.3899
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	19	49734909	63789666	7138	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	9305	1520135	1132	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	1520203	1541893	17	-1.5063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	1545946	49953028	30117	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	49954643	49956217	3	-4.1426
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	49957394	61188767	7979	-0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	61192853	61201265	2	-5.4779
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	20	61208831	62426597	426	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	21	9758742	46921385	22924	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	22	14432528	49581321	21827	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	X	108477	3135887	379	0.0428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	X	3136916	3137231	2	-5.704
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	X	3137253	12054573	6369	-0.0099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	X	12054688	12054869	3	-5.5036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	X	12056551	154835548	74164	-0.0164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E03_228730	Y	2710438	57427647	8528	-0.8911
