Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	61735	41916264	21057	-0.0158
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	41921085	41922577	2	-5.0306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	41925050	72768916	18961	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	72768936	72811904	46	-1.3755
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	72812440	110227515	22540	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	110232974	110240178	16	-0.8663
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	110242953	152555527	9454	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	152555706	152579825	28	-1.9592
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	152585718	167617699	9674	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	167619333	167621870	2	-4.2549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	167621900	211166348	27404	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	211168634	211168993	2	-5.0581
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	1	211184068	249224388	24607	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	12784	8049450	5850	0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	8049981	8052138	3	-5.2892
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	8053844	40128877	20431	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	40129165	40130032	2	-6.8371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	40130738	74140010	21471	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	74142728	74142982	4	-3.9433
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	74143212	96378240	9395	0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	96380129	96380253	2	-4.5345
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	96382057	98846093	857	-0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	98846405	98846962	2	-4.0366
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	98847658	103757033	2890	-0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	103757763	103762222	4	-3.6605
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	103762341	106881633	2046	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	106883229	106885357	8	-3.0924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	106887255	112421509	2597	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	112421566	112423188	3	-5.4169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	112423212	127842642	9146	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	127843193	127861906	10	-2.3714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	127862269	129277394	714	-0.0575
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	129277813	129280640	3	-3.3107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	129281551	146862085	10191	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	146864404	146866934	24	-2.2052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	146878395	158899542	6854	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	158902989	158903284	2	-3.4398
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	158903943	159574020	390	-0.0399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	159574478	159577391	7	-3.2171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	159577731	160868382	850	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	160873623	160874354	2	-3.2817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	160875221	161214175	206	-0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	161214857	161216721	2	-4.2992
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	161217535	229649805	40109	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	229661588	229666921	3	-3.5371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	2	229668868	243089456	7732	-0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	60345	3525928	2880	0.0677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	3527974	3528827	2	-3.3439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	3529474	4467526	806	0.0302
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	4468080	4469949	2	-5.4644
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	4470714	12004003	5592	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	12004653	12004825	2	-3.9395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	12005207	13045719	729	-0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	13045939	13051493	3	-2.7317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	13053835	27664455	9328	0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	27664725	27666131	4	-3.9357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	27666362	45384633	10922	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	45385866	45386229	2	-5.9975
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	45387111	67162932	13684	0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	67163881	67165103	3	-5.2933
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	3	67173306	197896118	74205	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	12281	10210390	5316	-0.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	10214160	10229308	15	1.2267
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	10229630	14572536	3371	0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	14573403	14581435	4	-2.0816
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	14581820	15097567	358	0.0256
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	15101629	15101870	2	-5.1594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	15101916	20985108	3761	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	20985138	20987717	2	-4.5012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	20988469	115173700	53707	0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	115175323	115182175	23	-2.19
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	115184229	171143274	32412	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	171144642	171144822	2	-6.0959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	171145305	172369346	754	-0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	172374884	172377776	12	-1.2084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	4	172380371	191027923	11855	0.0306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	15532	1830977	834	-0.0461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	1833627	1838383	4	-3.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	1838481	3783902	1663	-0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	3788284	3790765	4	-2.6622
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	3793980	27524452	15721	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	27525514	27526020	9	-2.4103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	27527479	57321646	15719	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	57326027	57333533	32	1.4556
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	57338357	169439954	66359	0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	169440040	169440299	2	-4.3957
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	5	169440652	180790320	6536	-0.0224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	149661	31457633	21014	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	31465030	31484517	9	-3.5844
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	31484550	32452929	305	-0.1801
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	32454275	32544309	28	0.9533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	32561295	67008262	18133	0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	67009023	67048629	52	-0.6956
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	67049406	71726539	2971	0.0259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	71726719	71729019	5	-2.9425
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	71733002	74591858	1793	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	74592225	74601410	10	1.2822
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	74603555	79519669	3048	0.0256
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	79520689	79528574	4	-1.6829
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	79531255	80176353	369	-0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	80176581	80178392	3	-4.6379
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	80180120	103734829	14074	0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	103737976	103762061	45	-1.9918
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	103765470	168528019	40108	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	168534904	168535487	3	-3.9949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	6	168535515	171051005	1614	-0.0243
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	43355	20503965	13680	0.013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	20505823	20506245	4	-3.1212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	20516346	137002571	66222	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	137003857	137004444	2	-3.9392
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	137005808	142099968	2990	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	142099988	142108941	3	-2.7165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	142115353	146669707	2640	0.0419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	146673289	146673398	2	-4.1885
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	146674851	154954617	4994	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	154956931	154958404	5	-2.9208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	7	154960238	159127004	2487	-0.0242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	31254	594973	307	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	595220	595908	8	1.665
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	601043	6272138	6243	0.025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	6272399	6272799	2	-3.6591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	6273642	78813766	43466	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	78814588	78814748	2	-3.974
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	78814835	134515921	33418	0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	134521888	134528984	10	-1.483
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	134530353	142706830	5951	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	142706843	142709706	2	-5.1136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	142710122	143851755	458	0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	143857265	143879927	4	-3.4074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	8	143881905	146298155	755	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	46587	68183981	29767	0.0178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	68186051	68186059	5	3.0344
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	68188340	85978157	10463	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	85980087	85980446	2	-4.5464
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	85982130	94278244	5614	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	94281111	94281710	4	-4.6627
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	94283353	97338996	1674	-0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	97340038	97354528	3	-4.1489
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	97355233	100153904	1762	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	100156312	100156757	2	-2.4459
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	100158460	100533466	205	-0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	100534823	100535267	2	-3.9775
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	100535317	108919024	5617	0.0159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	108923289	108925446	3	-4.6544
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	108933072	138365624	18900	-0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	138373864	138376145	2	-5.6962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	9	138381515	141091394	910	-0.0999
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	72809	23206161	17167	-0.0134
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	23206246	23206303	2	-4.4945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	23209044	24372757	753	0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	24375263	24378054	12	1.43
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	24378908	24379039	4	0.7666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	24380660	43889315	10068	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	43890151	43891554	2	-3.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	43891890	47059821	1632	-0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	47062311	48117203	266	0.4771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	48179770	67306276	12092	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	67307923	67314430	27	-2.7026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	67314446	89357643	13638	-0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	89363781	89367086	5	-2.9861
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	89369898	105670013	9433	-0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	105671109	105671804	2	-6.5184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	105676825	130346509	16947	-0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	130347265	130347469	2	-5.5934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	130347918	132357304	1498	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	132358982	132360110	3	-3.2982
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	10	132362103	135506704	1736	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	198572	88378528	50594	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	88380349	88380618	5	-6.4728
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	88382118	103523652	10100	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	103524012	103524114	2	-4.1296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	103527382	131118618	18262	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	131120758	131121515	4	-3.3523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	11	131132698	134944770	2792	0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	150442	52752845	30426	0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	52753861	52755341	2	-5.8783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	52757924	53117023	309	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	53117157	53119891	3	-4.4363
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	53120231	104144852	30768	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	104147709	104149022	2	-4.3076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	104150431	128909655	15481	-0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	128909714	128909855	2	-5.0565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	12	128910398	133778189	3057	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	19026949	19731876	302	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	19732017	19734722	7	-2.4813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	19734835	26725394	4534	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	26726079	26726205	3	-6.1931
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	26726751	90478371	39398	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	90480383	90487155	2	-5.8418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	13	90491159	115108397	16414	-0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	19002124	21132022	694	0.0916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	21135449	21136991	2	-5.1448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	21143947	25684946	2808	0.0364
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	25688651	25689084	2	-4.0237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	25689978	61622976	21356	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	61623526	61623901	2	-5.2563
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	61624604	72807622	6726	-0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	72807663	72807682	2	-6.1847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	72808299	94326403	13186	0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	94326691	94329276	4	-3.0984
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	94329296	106879831	7193	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	106881352	106918108	49	-2.5347
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	14	106918649	107285437	217	0.1243
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	15	20016328	40885061	11460	0.0206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	15	40885107	40886553	3	-3.7079
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	15	40889607	78115998	21373	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	15	78119345	78121487	2	-4.9446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	15	78122509	102469040	15963	-0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	60777	9094667	5991	-0.0152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	9097525	9109391	11	-1.7758
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	9110890	23195646	8179	-0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	23195993	23196738	2	-3.8009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	23198810	33538238	4685	-0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	33542840	33644022	39	0.8842
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	33644292	78371498	20253	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	78371608	78373337	5	-2.584
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	78373764	78377528	8	-1.2577
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	78379675	78384738	3	-3.0415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	78384765	81161034	2986	-9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	81161083	81165193	5	-3.4912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	81165985	87859176	5832	-0.032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	87864074	87883721	8	-2.6179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	87884517	87997073	51	0.0132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	87998312	88000704	2	-3.3993
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	16	88001745	90287535	832	-0.0776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	526	18108496	10456	-0.0161
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	18108562	18109328	2	-4.5108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	18122868	18319862	117	-0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	18355392	18465221	29	-1.312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	18469197	19638543	448	-0.028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	19642952	19644881	2	-4.2244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	19645901	76638628	29261	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	76640691	76648711	5	-4.7263
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	17	76649688	81049726	1881	-0.0522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	11543	36063101	20192	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	36063764	36063865	2	-4.4113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	36065856	56088202	12692	0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	56095652	56096778	2	-5.4901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	56099492	74281812	12723	0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	74282359	74282563	3	-3.0876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	18	74283359	78014582	2268	-0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	90910	2242829	449	-0.0938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	2244072	2244903	2	-4.1552
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	2266821	8303398	2150	-0.0438
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	8303705	8304176	2	-5.2761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	8305221	11163562	1277	-0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	11163601	11163689	2	-3.688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	11168662	40050195	13676	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	40055116	40060380	2	-3.6172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	40061258	48346260	3851	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	48346462	48355023	2	-5.8678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	48355389	57474906	4886	-0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	57477271	57479482	5	-3.2703
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	19	57481592	59097854	919	-0.0236
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	61305	979720	681	0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	981118	985712	5	-2.9884
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	986820	1570737	431	0.0421
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	1570752	1582092	26	2.5688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	1582207	45693322	26980	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	45695362	45695518	3	-3.5553
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	45696812	52188995	4267	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	52189278	52189951	2	-4.0448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	52191399	56746045	3498	-0.0079
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	56747244	56747586	3	-3.5424
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	20	56750919	62956153	3747	-0.0245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	21	10736871	48096957	22917	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	16052528	18905606	1165	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	18908641	18909276	3	-3.7042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	18916856	19101008	112	-0.119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	19101978	19103298	2	-6.1847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	19103598	25615424	3779	-0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	25615724	25617346	4	-5.1225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	25617602	46677904	13587	-0.0235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	46684558	46685563	5	-3.2174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	46687091	47741458	697	-0.0293
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	47749241	47752322	4	-3.9132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	22	47753491	51234455	2429	-0.0478
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	168477	2777846	153	-0.0297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	2778322	2778345	2	-5.6327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	2778433	4425763	1102	-0.0453
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	4425944	4426159	2	-5.8979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	4426238	116543570	57731	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	116543681	116574486	24	-1.4286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	116577406	123440290	3924	-0.0369
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	123440540	123441167	2	-6.1621
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	123442215	130393121	3777	-0.0223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	130396119	130397166	2	-6.2664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	X	130397317	155182354	14082	-0.0268
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_E11_228858	Y	2650438	59018259	8562	-0.8497
