Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	1	3218610	235075929	114107	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	1	235078938	235078957	2	4.567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	1	235079866	247813706	7415	-0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	2	484222	238489570	122433	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	2	238493118	238495115	2	-5.9128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	2	238496236	240125113	806	0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	2	240127076	240127549	3	-2.3768
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	2	240131244	242476062	1212	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	2212571	7350358	2375	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	7350877	7361342	6	-2.1939
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	7366195	30984982	13695	-0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	30986647	30987740	2	-2.8114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	30990068	46726536	8882	-0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	46730749	46737979	2	3.9817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	46741611	67162932	10896	-0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	67163881	67165103	3	-3.7315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	3	67173306	197538677	65027	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	1053934	39409484	22442	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	39410182	39410368	2	-2.5738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	39411647	39644684	94	-0.0702
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	39646286	39659943	5	-2.4267
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	39662080	180918137	71747	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	180922659	180930095	5	-2.4919
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	180935444	186602909	2256	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	186603464	186604905	2	2.6484
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	4	186605378	188763651	1232	0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	914233	37934463	20534	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	37935679	37935753	2	-3.9159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	37936352	55986750	7529	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	55987196	55987230	2	-3.6594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	55987417	118627271	32065	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	118627319	118627506	2	-5.1868
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	118628544	168720091	29057	0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	168721048	168721192	2	-3.916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	5	168722659	180360469	6030	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	6	1014281	3717179	1849	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	6	3717713	3718244	2	-2.7533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	6	3718624	18952606	9908	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	6	18954030	19036580	80	-0.7262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	6	19038296	170903919	79343	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	7	705284	158385118	76993	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	8	617667	14586593	6176	-0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	8	14588236	14588351	4	-2.439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	8	14589079	145232496	71170	-0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	789932	86103267	31921	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	86103530	86104398	3	-6.47
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	86108998	90050501	2582	-0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	90051391	90058688	2	-5.3292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	90060274	92682402	1595	-0.0307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	92684432	92685349	3	-3.3832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	9	92685383	140938752	27866	0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	10	415240	135225087	76039	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	11	456120	134142530	72760	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	12	889902	3096891	858	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	12	3099960	3100933	2	-5.0735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	12	3109641	46538696	21390	4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	12	46539044	46539630	3	-3.0892
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	12	46540003	133155338	47549	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	13	19450806	114987458	53608	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	14	20501368	105988038	46634	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	15	23687685	101884307	41890	0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	16	653459	67627069	25885	0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	16	67627635	67628479	2	-4.242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	16	67629809	89379936	12372	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	17	987221	9754964	4103	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	17	9755184	9763841	5	-3.209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	17	9764039	80917016	30542	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	18	329586	77109240	40328	-9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	19	284018	58878226	22295	0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	20	455764	62219837	34960	0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	21	15347621	39937005	15066	4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	21	39937085	39938097	2	-3.7019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	21	39938412	47678295	4339	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	22	17423930	45322417	13063	0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	22	45323933	45325461	2	3.1756
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	22	45326176	49331012	2639	0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F01_228700	X	3157107	154905589	61036	-0.0306
