Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	51598	4479099	1443	-0.0538
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	4479118	4481126	5	-3.2208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	4481198	5257031	635	-0.057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	5259358	5268449	4	-3.5421
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	5268607	14953770	5012	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	14957733	14958600	3	-4.5253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	14962354	37961794	12217	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	37965124	37969428	2	-4.6931
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	37972420	53875531	8310	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	53875963	53881494	3	-3.0834
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	53886743	72541504	12584	0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	72541524	72583721	44	-1.2438
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	72583736	156694175	35390	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	156699432	156699609	2	-4.242
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	156699675	167482735	7673	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	167500598	167508390	7	-3.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	167509025	194981496	17329	0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	194994473	195028443	42	-1.9516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	195028689	195082414	54	-0.9642
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	195083353	209232971	8983	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	209235257	209235616	2	-4.6668
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	209250691	227415740	11231	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	227423460	227423549	2	-3.1597
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	1	227425305	247191011	13481	0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	2784	3599424	2317	-0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	3601866	3633697	20	-0.7513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	3636042	10980492	5570	0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	10980920	10982079	3	-3.551
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	10986187	20616292	6743	0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	20619679	20623132	4	-2.9214
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	20623604	34544573	8059	9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	34554898	34590017	44	0.6573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	34590561	35963326	949	0.0694
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	35963438	35965782	2	-4.8395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	35967039	44180454	5751	0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	44182502	44191258	2	-4.3261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	44195480	45708368	1016	0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	45710394	45710855	2	-2.9404
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	45714271	69902038	15438	0.0201
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	69908546	69908675	2	-4.0175
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	69909986	74069836	2147	0.0146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	74070023	74071364	2	-4.9159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	74074539	75099424	580	-0.0203
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	75102163	75102305	2	3.2188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	75105944	87592428	7514	0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	87596763	87805782	41	-0.6936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	87827736	101533302	4065	0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	101534343	101534448	3	-3.5664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	101536455	239525524	80631	0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	239528796	239530073	3	-4.3017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	239530402	240884003	835	-0.0346
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	240888050	240888452	2	-5.3553
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	2	240889705	242738129	781	-0.1648
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	35345	6052996	4939	0.0461
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	6057275	6073381	16	-1.2619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	6075959	13020939	5126	0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	13022002	13026493	2	-4.3726
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	13028835	65163493	32773	0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	65164275	65174742	30	-0.6069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	65174907	65178572	6	0.2027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	65178578	65185339	14	-0.6674
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	65185355	68828854	2291	0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	68828949	68830103	14	-1.3987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	68831448	110092046	20951	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	110096756	110096976	2	-5.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	110101691	124266643	8278	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	124270696	124271312	2	-3.2951
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	124273413	131169124	3899	-0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	131169516	131181393	9	-2.1503
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	131182048	131245549	32	0.105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	131246388	131288926	52	-1.222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	131289614	135024184	2369	0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	135024391	135024464	2	-3.1962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	135026484	163990886	16987	0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	163990962	164106591	69	0.7197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	164108674	181521208	10304	0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	181524226	181525261	3	-4.0573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	181525864	185809558	2163	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	185813936	185814140	2	-4.4187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	185817444	194360596	5775	0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	194360656	194365597	19	-1.5309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	3	194369129	199380515	2537	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	2281	9819488	5352	-0.0224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	9832514	9840596	28	-1.982
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	9843312	9953722	133	0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	9955343	9955648	2	-3.8936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	9956054	115393149	61263	0.0113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	115394772	115401624	23	-1.9113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	115403678	172611602	33302	0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	172613549	172614285	7	1.8096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	172614299	186127479	8661	0.0187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	186129509	186130134	2	-3.6584
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	4	186130394	191261904	3258	0.0402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	68532	2632136	1430	-0.0323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	2632462	2633144	2	-5.8721
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	2633455	37970220	23305	0.0189
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	37971436	37971510	2	-3.8431
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	37972109	57357403	9352	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	57361784	57369290	32	1.6249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	57374114	135434162	45291	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	135434433	135434557	2	-4.6217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	5	135437581	180722926	27941	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	94661	71783260	42758	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	71783440	71785740	5	-3.1889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	71789723	74648586	1799	0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	74648953	74658138	10	-2.4926
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	74660283	75156042	315	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	75156500	75169435	14	-1.2171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	75169621	79029340	2337	0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	79029443	79036552	14	-0.6293
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	79037067	79037166	3	0.9708
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	79044205	79083964	73	-0.6707
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	79084016	86003121	4286	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	86003220	86003407	2	-4.9354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	86005310	155799473	42490	0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	155799927	155801887	2	-3.1825
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	155802077	162709290	4565	0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	162709305	162753205	36	-0.7571
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	6	162757512	170892930	5387	-0.0199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	52911	1017032	223	-0.0612
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	1021043	1031246	4	-3.0691
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	1032387	12131518	7047	0.022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	12132511	12132798	3	-3.5562
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	12133309	20740359	6627	0.028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	20740520	20740616	2	-3.524
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	20742816	22114260	1022	0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	22114495	22115321	4	-2.4315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	22117413	23998591	1241	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	23998832	24023520	15	-1.0327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	24026093	31977339	5608	0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	31981820	31982063	2	-2.9729
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	31982564	32005807	23	0.1123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	32006891	32033840	31	-0.4028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	32034427	32411195	311	0.0406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	32413265	32413608	3	-3.1762
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	32413787	48896149	10504	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	48896160	48896760	2	-3.9608
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	48899553	54347867	3853	0.0226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	54353999	54354011	6	-2.4862
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	7	54360982	158819765	56919	0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	21254	584973	307	-0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	585220	585474	3	2.7062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	585693	2164910	1174	0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	2166003	2166214	2	3.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	2166935	8948305	6839	0.0309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	8948718	8948883	2	-2.8198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	8950115	10391620	1154	-0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	10392712	10393121	3	-5.8428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	10394904	82626393	42862	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	82627461	82628165	2	-3.9462
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	8	82629998	146268959	38687	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	36587	4625525	4486	0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	4626840	4626900	2	-3.9118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	4629853	7381634	2177	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	7381785	7381948	3	-2.9514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	7382288	7715409	329	0.0328
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	7715478	7717062	3	-4.2332
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	7717088	15289715	6150	0.0553
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	15289735	15289791	2	-4.2545
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	15290968	22482889	5568	0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	22491913	22492699	2	-2.8473
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	22499340	27571474	3483	0.0244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	27571980	27585995	11	-1.5277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	27589202	32107175	3223	0.0335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	32111137	32117551	2	-6.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	32120986	110495122	31852	0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	110495196	110497808	5	-2.3854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	110499006	111218900	500	0.029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	111218931	111220428	2	-4.7959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	111220776	137505445	16595	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	137513685	137515966	2	-4.8666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	9	137521336	140211215	911	-0.0526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	62809	23246167	17283	0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	23246252	23246309	2	-5.2569
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	23249050	25670930	1551	-0.013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	25674112	25674325	2	-4.2402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	25674545	28631322	2005	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	28637198	28637314	2	-4.7232
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	28641999	49863528	10184	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	49864414	49866388	2	3.4479
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	49867490	51500366	689	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	51510990	51561926	4	-2.402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	51580604	56850159	3743	0.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	56850247	56850323	3	-2.3922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	56850327	61425303	3220	0.0325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	61425483	61430183	3	-3.8618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	61431453	66976282	3517	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	66977929	66984436	27	-2.3619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	10	66984452	135356694	43549	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	188572	3083290	1076	-0.0301
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	3086529	3086541	2	-4.7347
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	3089750	4229734	567	-0.0314
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	4232580	4232709	2	-5.9686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	4252332	55426966	31292	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	55432601	55432875	2	-4.2312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	55433475	88018176	17906	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	88019997	88020266	5	-5.7163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	88021766	95607459	4936	0.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	95612158	95614629	2	-5.4477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	95614765	134366753	26329	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	134367406	134367615	2	-4.2224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	11	134373058	134449982	50	-0.0987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	20703	739459	388	-0.1042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	739524	744290	16	-2.8384
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	745615	9525137	5399	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	9529176	9619559	22	-1.7331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	9626236	46604236	22546	0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	46607966	46610741	3	-3.3179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	46611662	89007481	24603	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	89015800	89016205	7	-2.1295
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	89017688	123360167	21166	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	123364366	123364808	3	2.933
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	123365340	129545241	4894	0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	129546423	129546471	2	-4.7653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	12	129548125	132288262	1376	-0.0349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	17924949	20427926	1295	0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	20428331	20437147	3	-2.8422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	20439027	24407506	2789	0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	24407846	24413343	5	-2.0768
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	24414291	41013956	11281	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	41015928	41016151	2	-4.8979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	41016511	42673704	1157	0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	42674912	42675338	2	-4.4546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	42679811	47093069	2806	-0.0125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	47093128	47093779	3	-3.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	47095421	113289469	41309	0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	113292270	113292342	2	-4.1612
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	13	113293862	114126499	238	-0.0635
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	14	18072124	106356482	52514	0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	18276341	20602728	648	0.1142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	20606352	20606428	2	-3.3113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	20609612	39607062	11219	0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	39607260	39607290	2	-4.784
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	39607492	74254433	20364	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	74256261	74256581	2	-5.4686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	74257031	78286930	2323	0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	78287422	78288090	2	-3.3929
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	78288297	96049485	11577	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	96049527	96053778	6	-2.4513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	96054222	96494149	310	0.021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	96494606	96495728	2	-3.8424
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	15	96496047	100286563	2606	-0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	777	8548538	5728	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	8549970	8549992	2	-3.6156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	8550622	22336146	8143	-0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	22338871	22611363	73	-0.9498
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	22618243	76579857	25263	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	76580331	76582579	4	-2.9313
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	76582701	77363264	809	-0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	77364570	77364735	2	-3.5605
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	77364757	82003048	4779	0.0122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	82003648	82003805	3	-3.1064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	16	82004528	88815036	4515	-0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	526	41564451	22078	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	41568205	41756832	93	-0.4701
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	41764423	60140619	9995	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	60141226	60141318	2	-4.2171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	60141419	74037160	8299	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	74040865	74043459	4	-2.6479
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	17	74043727	78643088	1983	-0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	1543	6358300	4262	0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	6358668	6358752	2	-3.7724
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	6361311	36512725	17363	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	36514418	36519387	19	-0.7671
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	36523496	38304426	1160	0.0497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	38310567	38311765	25	-0.6526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	38312393	47551571	6007	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	47551652	47552413	2	-6.5184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	47552934	49515148	1290	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	49515577	49516443	6	2.441
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	18	49517431	76115554	17959	0.0263
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	19	41910	63789666	27446	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	9305	204727	152	0.0765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	204886	205032	3	-2.3498
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	205440	1494762	925	-0.0284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	1494811	1530207	71	-0.6374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	1538257	40905751	24409	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	40907163	40907316	2	-4.614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	40908219	46022442	3303	0.0168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	46024993	46034026	4	-3.0295
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	46042835	52717551	4564	-0.0133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	52718171	52722031	4	-2.7416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	52725495	55090303	1889	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	55091699	55095218	4	-3.8257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	55095921	56179451	762	-0.0264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	56180650	56180992	3	-4.5736
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	56184325	59189147	2350	0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	59189372	59193184	2	-3.6714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	20	59193438	62426597	1430	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	21	9758742	46921385	23034	0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	14432528	25942763	6996	-0.0218
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	25944307	25951151	6	-2.6889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	25954732	26286556	349	-0.0407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	26286628	26287277	2	-4.7873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	26287942	33667956	4896	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	33668995	33669359	2	-4.4096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	33672654	48036400	8898	-0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	48036422	48036679	3	-4.9028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	22	48036717	49581321	792	-0.0674
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	108477	2787846	153	0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	2788322	2788526	4	-4.496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	2789211	12054573	6618	-0.0407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	12054688	12054869	3	-4.566
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	12056551	12085627	28	0.0824
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	12085766	12085796	2	3.7237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	12085850	12219605	144	0.0544
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	12221602	12229178	7	-1.55
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	12229499	13226167	726	-0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	13240560	13246980	4	-2.9924
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	13247036	13256225	12	0.1044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	13257002	13265088	14	-1.1911
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	13270816	22424700	5196	-0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	22425693	22425871	2	4.1913
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	22426261	23890354	1112	-0.0169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	23892759	23892973	2	4.9253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	23893037	111394382	42414	-0.0202
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	111394490	111396730	3	-5.2247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	111397113	117451322	3447	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	117452305	117478777	14	-1.2074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	117479654	117512711	21	0.102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	117517282	117517440	2	-6.3418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	X	117517569	154835548	21252	-0.022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F05_228764	Y	2710438	57427647	8527	-0.882
