Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	3208470	38374067	17105	0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	38374660	38378987	2	-4.7109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	38381144	57410012	10064	0.0148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	57418107	57419249	4	-2.6226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	57419691	57496098	63	0.1352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	57498034	57498747	2	-2.7841
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	57499125	62531209	3409	0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	62532436	62532547	2	-2.9101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	62532940	66741157	2817	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	66741601	66741672	2	-6.5184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	66746802	166598133	40674	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	166599377	166603017	3	-3.5822
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	1	166605749	245880329	47104	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	474222	47610755	26532	-4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	47616523	47616873	2	-5.6663
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	47617399	113545993	29408	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	113546180	113547159	5	-4.1705
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	113547397	121607278	3971	-0.0337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	121609302	121609358	2	-3.8695
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	121613644	130176566	4188	-0.0492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	130176585	130186378	5	-2.322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	130186927	136748868	2650	-0.0768
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	136753589	136754575	3	-4.143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	136755441	192504860	30259	-0.0598
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	192505280	192507381	2	-4.5105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	2	192507401	242124735	27160	-0.0658
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	2187571	72388236	39149	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	72389275	72395732	5	-3.8417
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	72398059	112446964	17714	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	112448304	112448344	2	-4.4164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	112448835	141642763	16139	0.0132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	141647402	141648061	4	-2.8093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	141648210	151902286	4828	0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	151910219	151910819	3	-2.499
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	151911784	154493949	1476	0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	154496643	154496686	2	3.0531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	154503160	187116762	15258	0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	3	187118064	199023074	6076	-0.4511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	1043934	6354581	2522	-0.6017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	6354745	6355349	5	-4.3808
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	6360483	16940992	6733	-0.611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	16943901	16944628	3	-4.8847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	16946116	21153894	2506	-0.5954
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	21153950	21159281	6	-2.3891
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	21159916	25416506	2640	-0.6
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	25425169	25425918	2	-4.5411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	25427772	46133216	11176	-0.5918
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	46136660	54284786	1884	0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	54284822	54285226	2	-4.7648
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	54285974	100794421	24542	0.0278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	100794506	100794734	2	-6.2959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	100795349	118606149	9548	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	118607100	118609912	3	-3.2912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	118610577	156511392	19616	0.0023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	156517095	156521793	5	-2.349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	156523005	163124438	3700	0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	163135052	163507815	221	-0.6685
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	163508713	163508804	2	-4.0448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	163509783	165299826	996	-0.5826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	165300282	165300355	2	-3.9115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	165300853	166543877	438	-0.5641
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	166544765	166546460	3	-6.269
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	166553534	170183578	1939	-0.6328
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	170184575	170184677	4	-4.5127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	170184715	171379849	591	-0.609
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	171381217	171386286	5	-3.8207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	171387232	186839903	7129	-0.5962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	186840458	186841899	2	-5.6121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	186842372	188633215	1011	-0.6071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	188635657	188636028	4	-2.6711
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	4	188637331	189836143	208	-0.7149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	967233	1427712	79	-0.7374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	1427886	1428080	2	-6.163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	1428977	2749353	641	-0.5979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	2749580	2749644	2	-5.9381
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	2750687	6407132	2802	-0.6311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	6408394	6920195	423	-0.0565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	6920559	6921922	2	-3.648
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	6922839	9612222	1853	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	9612903	9613249	3	-4.9824
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	9613416	118655170	54242	0.013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	118655218	118655405	2	-4.5735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	118656443	127915600	5043	0.0182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	127915721	127930844	3	-2.9404
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	127933634	148169619	11209	0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	148171591	148171737	2	-3.3564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	148173136	165680464	10688	-0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	165680581	165685493	3	-3.8729
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	165685530	167476738	1225	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	167484081	167486458	7	-3.1373
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	5	167487855	180293075	6849	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	959281	91163036	46987	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	91163700	91163739	3	-4.3377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	91165112	155687147	36377	0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	155690271	155691347	2	-4.6217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	155693032	159260856	2014	-0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	159262765	159263351	2	-4.6984
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	6	159267390	170745844	5626	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	7	671810	2136257	342	-0.1031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	7	2137132	2137285	2	-5.7199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	7	2137641	34658283	17738	0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	7	34662904	34664776	5	-3.9051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	7	34665390	158077879	58816	0.0166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	607667	9240439	3448	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	9242915	9242941	2	-4.6904
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	9242994	14594583	2645	0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	14594595	14594831	2	-5.0792
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	14596436	18045532	2359	0.0355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	18048177	18050039	3	-2.7797
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	8	18050253	145304484	68790	0.2151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	9	779932	138191298	63420	0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	9	138390697	138390796	2	-6.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	9	138391176	140058573	414	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	405240	26227755	16831	0.3878
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	26227929	26230851	3	-4.4094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	26231120	33529600	4645	0.3854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	33535989	33536295	2	-3.3639
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	33537451	34466286	647	0.3752
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	34466691	34466918	2	-2.3466
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	34467464	83002708	22877	0.0588
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	83004141	83008198	4	-3.4692
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	83009527	117870491	20614	0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	117877267	117877598	3	-3.6218
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	117883955	121268049	2149	0.033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	121268062	121274031	2	3.5668
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	121274654	121864981	320	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	121865521	121865602	3	-3.0945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	121865711	126673626	3391	-0.0154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	126674064	126679388	5	-3.6904
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	10	126683183	135075077	4420	-0.0154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	446120	3083290	807	-0.5172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	3086529	3086541	2	-5.0959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	3089750	6937830	2095	-0.5412
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	6939568	6939797	2	-5.3724
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	6942422	16487028	6241	-0.5516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	16487528	69244757	25099	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	69246102	69250171	5	2.5179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	69252264	130623828	36546	0.0317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	130625968	130626725	4	-4.0339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	130637908	130971234	273	-0.0259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	130972652	130973066	3	2.1181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	130978044	133066609	1235	0.0317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	133068519	133068701	2	3.2111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	11	133070002	133645362	224	0.071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	760163	8979972	4210	0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	8980539	8981935	2	-3.4527
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	8982126	38976249	14936	0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	38994694	43458701	2337	-0.5743
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	43460676	44119407	348	0.0274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	44121098	45403426	674	-0.5714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	45405640	45486122	61	-0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	45491002	46459883	510	-0.6232
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	46466775	46467641	2	-5.0399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	46472448	47534150	584	-0.5273
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	47534881	51581088	1940	0.0252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	51581661	51581818	2	4.4879
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	51587029	53262828	712	-0.0103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	53264138	53266026	2	3.5796
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	53266342	70542569	9962	0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	70546315	70550650	3	-4.2565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	70551843	113081061	24297	0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	113081649	113083610	4	-3.2227
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	12	113086523	131665411	9085	-0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	18348806	28828603	5685	-0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	28831712	28831851	2	-6.3324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	28832602	29599118	557	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	29604303	29604962	2	2.0731
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	29605436	29658420	33	0.1459
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	29659027	29671281	7	-2.4223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	29673537	89276372	32310	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	89278384	89290080	4	-4.4082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	89292108	97888838	5253	0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	97889635	97893120	3	-4.5691
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	97895547	108922100	7229	0.0332
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	108923744	108924335	2	-5.2269
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	108924523	109813525	642	-0.0259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	109813629	109833937	23	-1.2842
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	109836653	111047742	774	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	111048111	111048395	2	-3.9299
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	111049123	113311128	879	-0.0604
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	113311698	113312518	4	-3.9036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	13	113313191	114005560	112	-0.0767
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	19571208	55542240	18076	0.0247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	55542359	55542802	2	-4.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	55542998	72357104	9755	0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	72360030	72360462	2	-3.3417
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	72364297	77407083	2756	0.0268
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	77407874	77414900	2	-6.1847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	77415285	82205956	3056	0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	82213118	84182396	1225	-0.5867
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	84184868	91857682	4315	0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	91866160	91866623	3	-2.823
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	91866998	93392915	828	0.0248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	93395565	93396444	2	-6.0751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	93396982	102615355	5759	0.0436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	102630339	102636538	2	-3.8094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	14	102649402	105059083	754	0.1224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	21238778	21569300	218	-0.5787
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	21576255	24779607	1681	-0.0287
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	24780701	25056614	203	-0.543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	25064527	25071628	13	-1.7769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	25072946	30830125	1028	-0.5714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	30830747	33750373	1783	0.035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	33754471	34536722	550	-0.6112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	34537075	36424560	1204	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	36426318	36830660	277	-0.5637
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	36832349	36833504	4	-5.598
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	36834091	38033128	811	0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	38037300	38313708	134	-0.6537
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	38316422	40307448	873	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	40307909	40499082	109	-0.601
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	40503236	40504390	2	-5.1532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	40506209	41627092	479	-0.5492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	41629597	41904178	31	0.0949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	41904208	42014145	56	-0.5023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	42014226	42296792	121	0.0818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	42301863	42301983	2	2.4997
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	42303156	44053184	742	0.0264
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	44053207	44702389	397	-0.576
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	44702758	44747277	41	0.0987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	44751538	44754569	6	0.6036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	44756947	44799775	27	0.0285
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	44803959	45714630	585	0.3757
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	45715212	47129827	905	-0.5664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	47133408	49467075	1263	0.2974
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	49467751	49472942	2	-3.374
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	49475150	50514090	547	0.2111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	50514389	50601024	40	-0.6283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	50602016	51923334	940	-0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	51924277	51979784	41	-0.6097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	51992663	52056154	59	-0.0406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	52057403	52062519	8	-1.0973
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	52063495	52502671	316	0.2968
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	52502842	52926669	263	-0.515
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	52926714	53017256	70	0.1172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	53017510	53088662	49	-0.6928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	53088684	53532077	243	0.0332
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	53535254	54539727	510	-0.5672
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	54539782	54928673	171	0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	54931303	55648665	299	-0.6623
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	55649306	56450565	583	0.2014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	56454082	57040287	331	-0.6465
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	57041651	60643911	2632	0.2244
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	60646813	60648062	3	-5.2992
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	60648330	60979804	258	0.102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	60981065	60982873	3	-1.8326
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	60990221	61381517	258	0.0472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	61381744	61604768	145	-0.6332
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	61605542	62117282	285	0.1837
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	62117314	62117855	4	2.2653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	62122278	63404871	496	0.1487
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	63406095	63659046	99	-0.5245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	63659696	66512451	1741	0.2348
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	66513213	66599223	58	-0.7155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	66599507	66602268	3	1.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	66603677	66649876	25	-0.5942
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	66650376	96049485	15886	0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	96049527	96049742	2	-3.7673
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	15	96051503	99701830	1860	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	16	593460	87907437	38208	0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	933971	5060996	1643	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	5065632	5079237	2	6.5144
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	5082524	30052803	10560	0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	30053683	30056353	10	-2.0906
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	30059266	60140619	13714	0.023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	60141226	60141318	2	-3.8536
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	60141419	74958465	7508	0.0351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	74960226	74967904	3	-3.3497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	74968597	75775894	262	-0.0199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	75775997	75776410	4	-2.4121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	17	75778616	78510305	863	-0.0594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	319586	9525143	4831	-0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	9526691	9527897	2	-4.0614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	9528533	9779325	173	0.0281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	9781117	9781344	2	-3.0493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	9782365	19946284	4161	-0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	19946880	19947846	2	-4.4214
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	19948000	36305869	9675	0.0138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	36307898	36323850	5	-4.7503
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	36327151	62667595	15556	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	62668055	62668257	2	-3.6091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	62669207	72851555	4510	0.2042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	72851811	72854154	4	2.2631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	72856491	72865573	9	0.1327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	72866930	72867293	3	-2.2674
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	18	72867438	75210228	1332	0.4134
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	235018	8920808	2472	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	8921812	8924678	3	-3.6379
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	8926632	21221087	4668	-4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	21223837	21224015	2	-3.3864
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	21228665	34553140	2369	-0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	34556421	34559636	5	-3.1911
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	34559723	48938175	7043	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	48939409	48948045	6	-4.7933
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	48950421	53232846	1814	0.0315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	53233536	53234144	2	-4.477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	53235408	56130289	908	-0.0451
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	56130510	62263780	2321	-0.5367
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	62263889	62265000	4	-3.6346
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	19	62267146	63570038	599	-0.5206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	403764	1158534	350	0.0274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	1162814	1162917	2	-2.7394
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	1165573	11614487	6272	0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	11619389	11789995	98	-0.6404
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	11796396	46025255	18441	0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	46025899	46034026	2	-4.5735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	20	46042835	61690281	9687	0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	21	14269492	46502723	19354	0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	15803930	25322055	2423	-0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	25327275	25327383	2	2.8356
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	25328710	25400806	46	-0.142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	25406412	25406596	3	-3.219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	25406984	37149295	7240	-0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	37149559	37150541	2	-4.9945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	22	37150782	47717016	5925	-0.0226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	3167107	12085627	2745	0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	12085766	12085850	3	5.2184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	12085940	15010121	1806	0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	15010156	15010543	4	-3.3148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	15010665	56005627	17471	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	56008971	56009069	3	-4.0982
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	56009801	97945523	14092	-0.0187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	97946950	97949207	2	-5.6728
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F09_228828	X	97949651	154558783	24842	-0.0487
