Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	51598	5822693	2481	0.1773
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	5823875	5824673	3	3.3146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	5824901	17472904	6000	0.0481
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	17473024	17476204	2	2.9229
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	17477288	25455928	4621	0.0422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	25465715	25535931	33	-0.7545
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	25545741	72535958	27133	0.0328
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	72541006	72584492	49	1.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	72585028	111172260	23421	-0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	111175616	111185495	41	-0.9475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	111189707	147308346	7093	0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	147308430	147540169	128	-0.495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	147541278	150822151	1457	0.073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	150822330	150846449	28	-1.2816
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	150852342	159281351	4943	0.0333
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	159284180	159292703	4	2.101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	159293345	167482735	5934	0.029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	167500598	167505355	5	-3.1585
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	167505369	233142552	41820	0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	233145561	233145580	2	5.1
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	233146489	240887552	5513	-0.0162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	240892696	240893955	2	-4.1723
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	1	240894900	247191011	3790	0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	2784	52028961	34696	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	52033414	52042135	6	-2.5199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	52042257	89636367	22162	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	89639248	91091707	166	-0.6649
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	91124554	94943109	192	-0.034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	94944469	94944592	2	-2.5637
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	94944760	97484644	796	0.0387
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	97507179	97546012	17	-1.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	97553734	111757996	7779	0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	111767354	111885943	37	0.8428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	111888859	127558707	9289	-0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	127558794	127578376	14	1.754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	127578739	180127998	30653	-0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	180128688	180129742	10	-2.0588
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	180129757	242163554	36564	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	242163769	242164778	2	-5.2196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	2	242166443	242738129	172	0.2551
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	35345	10339793	8227	-0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	10343577	10344180	2	2.988
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	10344524	46701540	23085	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	46705753	46712983	2	3.5235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	46716615	56604945	5008	0.0091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	56605509	56608932	5	-1.6436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	56620906	68814718	8892	0.0211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	68828854	68831931	23	0.8101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	68831947	75651239	4674	0.018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	75655239	75669495	6	-2.078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	75677871	150445666	39929	-0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	150446085	150450811	25	-0.6794
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	150453770	154493949	2457	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	154496643	154496686	2	2.5545
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	154503160	163995433	5484	-0.0079
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	163995786	164007552	10	-2.8847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	164011324	164098261	50	-1.1459
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	164098401	164098609	2	-3.2537
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	164106536	194361515	18278	-0.0315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	194361700	194365597	14	-1.5518
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	194369129	196122605	1098	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	196122635	196123134	3	-5.2876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	3	196123769	199380515	1441	-0.0277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	4	2281	590272	275	-0.1586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	4	630536	936453	103	0.3951
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	4	936974	946047	2	4.4407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	4	954359	9819488	4978	0.0383
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	4	9823258	9844280	35	1.2569
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	4	9844366	191261904	106620	-0.0263
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	68532	678303	254	0.1646
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	678375	738504	33	0.65
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	751371	832881	30	1.2657
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	834547	862806	12	0.6252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	870850	3836751	2191	0.0894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	3836757	3854906	13	1.143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	3855870	28669634	16386	-0.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	28670548	28768336	72	-0.5133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	28773974	97069347	36996	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	97074222	97125076	40	-1.3304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	97125440	179753756	50938	0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	179754051	179754188	2	2.1801
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	5	179755711	180722926	435	0.1164
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	94661	24761064	17706	-0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	24761252	24761525	2	-4.0936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	24762167	32589965	3787	0.0426
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	32590947	32678343	23	1.125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	32681749	44548700	6963	0.0335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	44553424	44553968	3	2.3655
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	44555576	67058797	11250	-0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	67058910	67105350	58	-0.7828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	67106127	67789000	537	-0.0846
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	67790633	67794379	2	-2.732
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	67795507	166512362	61067	-0.0287
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	166512822	166517803	3	-3.5006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	6	166521720	170892930	2704	0.0907
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	52911	8790955	4688	0.0357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	8791785	8832382	48	-1.1009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	8832522	57540669	33642	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	57540715	57549503	7	-1.2554
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	57555694	57954873	153	-0.0439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	57964577	57978666	2	-3.5171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	57990533	91046078	15455	-0.034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	91056820	91056899	2	-2.1607
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	91057068	91195805	95	-0.017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	91196230	91196890	5	1.8138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	91196969	142069775	29393	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	142075381	142212903	97	0.5001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	7	142213198	158819765	9901	0.0309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	21254	584973	310	0.1401
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	585220	585908	8	2.2086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	591043	10736962	9429	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	10738524	10739369	2	-2.3399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	10739944	13113232	1395	0.0424
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	13113613	13114364	2	-2.6592
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	13114544	25027869	9314	-0.0187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	25030360	25040250	27	0.6925
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	25047021	26627485	1162	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	26627642	26627897	2	3.5749
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	26628061	32551911	3803	-0.0113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	32556417	32558949	4	-2.4894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	32561193	40302962	4236	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	40303101	40312067	32	-1.0665
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	40313586	41509670	785	0.0597
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	41510290	41510745	2	2.6887
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	41515724	112364257	38881	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	112364378	112364436	3	-2.9971
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	112370428	115703883	1770	-0.0383
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	115704083	115704877	8	-1.237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	115707526	143463800	19038	0.0288
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	143480866	143489451	10	1.3749
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	8	143489637	146268959	877	0.1709
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	36587	16897149	14427	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	16899633	16902435	27	-1.0292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	16902448	24493816	5596	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	24494125	24507682	19	-0.9232
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	24509684	33806476	6524	-0.0322
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	33809365	33809555	2	-3.6318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	33810314	89240321	16602	0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	89241211	89248508	2	-5.5493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	89250094	138104747	31434	0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	138108018	138254129	43	0.475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	138256550	138458448	41	0.0697
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	138461400	138461433	2	2.8499
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	9	138461632	140211215	599	0.1159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	62809	2345384	1645	0.0615
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	2345489	2350003	6	2.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	2350250	26350685	17688	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	26351223	26352830	3	-4.1098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	26353343	30530088	2920	-0.0236
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	30536131	30540273	10	1.034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	30540424	47417400	7789	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	47432905	47468066	3	-2.1213
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	47480482	48000958	45	0.1015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	48001310	48014648	10	1.2547
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	10	48015215	135356694	55708	0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	188572	4924226	2278	0.0497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	4924693	4932910	30	0.6662
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	4932947	55118007	30452	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	55119916	55191703	45	0.7202
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	55194295	55426966	162	-0.1012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	55432601	55432875	2	-4.1365
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	11	55433475	134449982	49290	0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	12	20703	50987234	30530	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	12	50988923	51078328	95	0.5514
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	12	51081854	128280351	47372	0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	12	128280600	128280696	2	-5.8454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	12	128281528	132288262	2426	0.1542
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	17924949	22527187	2713	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	22527210	22531515	13	-2.2911
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	22536195	36970224	10016	-0.0106
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	36973904	36982757	14	-1.5965
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	36986330	47093069	6609	-0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	47093128	47093779	3	-3.7091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	47095421	109091032	38839	-0.0353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	109092251	109094563	2	-3.7108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	13	109095408	114126499	2711	0.0447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	14	18072124	103850878	51580	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	14	103851532	103942911	42	0.6658
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	14	103945603	105867742	586	0.1561
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	14	105872400	105873098	4	-2.2513
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	14	105886988	106356482	301	0.123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	18276341	23780886	2464	0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	23781626	23781872	2	3.125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	23782918	27131084	1742	0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	27131536	27229496	60	0.6227
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	27229817	88692775	36475	0.0167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	88692986	88696269	2	3.8038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	15	88696363	100286563	8332	0.0323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	777	32000335	18809	0.0465
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	32010045	32496123	75	-0.428
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	32496402	32496407	4	-3.6974
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	32496410	32756408	46	-0.366
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	32771424	32921363	26	0.2853
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	32943509	33572668	102	-0.4549
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	33575313	76929109	20435	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	76929941	76942239	15	1.1351
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	76942266	78527648	1839	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	78528079	78528542	2	-3.3342
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	78528701	84833357	5718	0.0852
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	84834020	84834318	3	2.8614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	84834382	86432357	1356	0.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	86435769	86441222	4	2.3258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	16	86442018	88815036	883	0.2195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	526	223775	122	0.5456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	225965	5060996	2376	0.0223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	5065632	5079237	2	8.1064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	5082524	31931177	14841	0.033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	31931245	31958113	24	0.869
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	31958496	36675211	2310	0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	36675234	36683976	24	1.6158
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	36684057	74875108	21283	0.0323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	74877129	74892827	10	1.7819
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	17	74896101	78643088	1473	0.0901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	1543	6076758	4094	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	6076900	6078451	3	2.5872
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	6078790	24449993	10127	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	24450110	24450128	2	2.9595
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	24450630	36514418	7396	-0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	36514432	36519387	18	-0.8485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	36523496	54239182	11403	0.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	54246632	54247758	2	4.3187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	18	54250472	76115554	15059	-0.0298
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	19	41910	15641041	6105	0.0517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	19	15641222	15651085	15	1.1051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	19	15652664	63789666	21320	0.027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	20	9305	8475992	5950	0.0358
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	20	8476137	8480923	2	2.6593
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	20	8481991	52078275	26966	0.0221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	20	52081215	52088051	30	-0.6594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	20	52091124	62426597	6954	0.0611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	21	9758742	46789549	22921	-0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	21	46791405	46810697	25	0.9142
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	21	46811098	46921385	97	0.1452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	14432528	22700430	4358	0.1831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	22701070	22715546	4	-2.1076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	22716631	24082264	854	0.0418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	24083970	24086933	14	1.1302
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	24087268	40097866	10567	0.0423
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	40098571	40098808	2	3.3003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	40098978	41255558	582	0.0733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	41262261	41307010	15	1.0169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	22	41307134	49581321	5572	0.1072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	108477	2721961	104	0.0995
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	2722283	2722661	2	5.4684
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	2722915	2788433	50	-0.0166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	2788526	2789211	2	-5.2057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	2789749	3135887	222	-0.0435
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	3136916	3137253	3	2.1956
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	3137322	3176148	37	-0.1443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	3177032	3177102	2	-5.5023
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	3179781	33376418	19484	-0.0457
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	33377481	33575117	140	0.7897
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	33575548	35786584	1346	-0.1557
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	35789281	35792322	2	-5.8009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	X	35792348	154835548	59451	-0.037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	Y	2710438	22093119	7254	-0.9195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	Y	22099738	22175542	34	-0.318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_F12_228876	Y	22182373	57427647	1238	-0.909
