Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	3218610	120354421	63496	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	120358925	120359202	2	-4.5965
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	120360143	161930476	5975	0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	161930730	161931260	4	-4.0221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	161933048	211166348	29716	0.0468
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	211168634	211168993	2	-4.7876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	211184068	220488956	5866	0.0834
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	220488972	220489544	5	-1.9597
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	220489717	220543697	39	0.0682
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	220546380	220546943	3	-2.8765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	220548037	229019148	4458	0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	229019415	229019455	2	-3.6898
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	229020078	235663874	4343	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	235678750	237014626	845	-0.5756
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	237015100	237299349	236	-0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	237301729	237570426	200	-0.5474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	237572756	239081747	1156	0.0639
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	239098134	239984363	573	-0.6689
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	239987651	239988849	2	-5.4644
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	239989748	240345142	266	-0.5669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	240346303	241764452	1023	0.0443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	241766551	242407657	380	-0.5784
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	242407921	242978133	401	0.1228
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	242979906	243001683	14	1.2474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	243003522	243005376	2	-0.7567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	243005398	243454680	64	1.3854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	243457944	243458457	2	3.1117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	243458922	244125726	464	1.3291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	244125754	246037558	1037	2.3539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	246037920	246175858	105	0.3848
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	246179308	247245248	99	-0.395
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	1	247247008	247813706	300	0.1951
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	484222	6323512	3032	-0.5777
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	6325751	18505576	7719	0.0323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	18505648	18505939	2	-3.4884
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	18506252	18680617	145	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	18681330	18681597	2	-3.0529
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	18682294	22894563	2503	0.0415
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	22896073	22897715	2	-4.8383
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	22897984	199294343	86256	0.0245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	199298854	199299078	2	-4.7097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	199302848	205163665	3008	0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	205163981	205165785	3	-3.9135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	205168145	219908937	8528	0.0463
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	219914357	223694545	2320	-0.5982
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	223700432	223893541	135	0.0386
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	223895958	223953603	42	-0.7069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	223958144	230391309	3950	0.0215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	230393031	230400840	3	-3.5835
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	230401851	231063655	234	0.083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	231065083	231065252	2	-3.3117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	231076289	234182907	1365	0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	234186489	234189359	2	-3.5527
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	2	234189406	242476062	4810	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	2212571	4799948	1353	0.0652
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	4800550	4801967	2	-4.3115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	4802165	17071977	7110	0.0459
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	17072930	17073032	3	-3.3162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	17073076	25883241	4711	0.0403
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	25885030	25885177	2	-5.2772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	25886052	46726536	11681	0.0271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	46730749	46737979	2	3.6769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	46741611	54314698	3140	0.0292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	54315380	54330712	12	-1.6663
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	54331795	58558056	2691	0.0252
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	58560043	58563283	2	2.8868
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	58564357	59365113	387	0.0093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	59366118	59373505	10	-2.5836
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	59373745	67162932	4631	0.0418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	67163881	67165060	2	-4.3511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	67165103	188920625	60991	0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	188920753	188959958	21	-1.1283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	3	188963780	197538677	3849	0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	1053934	6303844	2540	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	6303955	6304448	4	-2.7843
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	6309582	6728545	253	0.0605
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	6733659	6736365	2	-3.4477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	6736446	13071188	3569	0.0181
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	13071495	13072585	3	-3.7488
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	13073411	31306116	11382	0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	31307790	31307941	2	-5.8999
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	31316890	171143274	71399	0.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	171144642	171149711	5	-4.6673
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	171150657	179275460	4272	0.0355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	179278251	180390926	346	-0.6688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	180394340	180394551	2	-5.9771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	180398517	182742443	1265	-0.632
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	182751197	182753524	4	-4.2745
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	182754966	186602909	1250	-0.6168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	186603464	186604905	2	4.1307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	4	186605378	188763651	1213	-0.6168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	914233	10107331	6263	0.0248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	10107999	10113533	6	-3.1712
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	10114035	38006555	14268	0.0447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	38008042	38009210	2	-5.5078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	38009611	38801315	598	0.0416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	38804071	38806480	2	-4.6217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	38806643	59017442	8774	0.0224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	59017895	59018067	3	-3.523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	59028853	148189426	46296	0.0298
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	148191398	148191544	2	-4.4798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	148192943	167437715	11792	0.0307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	167437950	167437994	2	-3.4132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	167438741	173793337	4023	0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	173793690	173793906	3	-2.7695
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	5	173794073	180360469	2925	0.0369
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	1014281	124876943	64760	0.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	124878011	124887666	4	-4.1553
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	124890005	155691540	18536	0.0223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	155695101	156005116	225	-0.7116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	156008401	160771363	2715	0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	160772842	160774486	3	-3.3063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	6	160774928	170903919	4674	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	705284	31008004	15814	0.7544
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	31011485	31013504	2	4.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	31015530	54585273	14518	0.7347
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	54594535	55123552	390	3.3354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	55126912	55131000	14	5.0407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	55133003	55203297	126	3.3945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	55203571	55225327	39	0.8829
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	55225401	55717942	306	3.2677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	55724401	80660357	7562	0.7329
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	80665170	80665391	2	-3.2487
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	7	80665450	158385118	38304	0.7564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	617667	14544651	6106	0.0278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	14550156	14550460	4	-3.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	14552065	18141216	2438	0.0533
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	18141724	18141935	4	-2.2534
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	18143606	27787031	6435	0.0516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	27787224	27787309	2	-4.6365
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	27792837	90113946	30982	0.0346
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	90121459	90128525	2	-4.4711
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	90129505	108031311	9727	0.0339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	108031577	108042036	5	-2.8263
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	108046906	119537799	6227	0.0421
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	119538923	119539320	4	-5.0769
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	119540604	126494562	4264	0.0353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	126494764	126499878	2	-4.8222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	126500350	132408509	3935	0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	132411572	132411848	3	-3.4492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	8	132412449	145232496	6980	0.045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	789932	3765198	1820	-0.6117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	3766183	3766974	2	-4.9686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	3768162	4058429	282	-0.5809
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	4059101	4059466	3	-4.099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	4060068	4285670	170	-0.6963
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	4286898	4286932	2	-5.9722
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	4287021	7725478	1582	-0.5685
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	7725521	7727088	3	-5.7286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	7727388	21416492	8356	-0.5904
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	21419723	22293804	529	-1.9477
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	22300338	101909372	28579	0.0167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	101909657	101909753	2	-4.3196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	101911218	105600764	2016	0.0231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	105602631	105603101	2	-5.705
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	105604224	111281164	3574	0.0317
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	111281324	111281792	2	-5.2756
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	111282843	135590998	14771	0.0235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	135598603	135600186	4	-4.7329
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	9	135602668	140938752	1968	0.0199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	415240	10143234	6147	-0.6344
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	10144150	10146232	2	-6.7119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	10153386	56196319	23732	-0.6105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	56196942	56197191	2	-6.7936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	56197903	60712592	2151	-0.6054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	60715371	60741618	28	-1.87
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	60747086	61856269	778	-0.5874
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	61857361	61857543	3	-6.3377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	61859809	66283739	2614	-0.663
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	66286540	66290693	3	-6.2756
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	66291373	79527215	7192	-0.5798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	79527295	79528964	3	-5.5574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	79529215	85252727	3398	-0.5765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	85253567	85257423	3	-4.5942
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	85257718	85597561	279	-0.643
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	85600360	85600523	3	-5.5398
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	85600714	116686136	17966	-0.5837
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	116689519	116701469	5	-4.5486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	116702872	119466432	1739	-0.6012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	119466874	119467148	3	-5.7654
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	119470010	121266839	1116	-0.5892
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	121267016	121267823	2	-6.4916
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	121268113	126786046	3766	-0.5777
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	126787770	126788191	2	-5.5237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	126788324	127092847	168	-0.5056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	127096030	127096739	2	-6.0446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	127103671	127495807	255	-0.5439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	127495832	127505939	6	-2.0388
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	127509294	127731102	130	-0.4919
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	127731197	127731365	2	-6.1313
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	127734329	131225716	2477	-0.5884
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	131228043	131233033	4	-4.889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	10	131238604	135225087	1250	-0.5645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	456120	11455716	5823	0.053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	11456749	11464163	5	-2.9565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	11464790	31901346	12953	0.036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	31901999	31902533	3	-3.0243
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	31905087	64310452	14000	0.1331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	64312153	64312403	2	-5.272
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	64313291	131120859	38041	0.0318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	131121443	131121515	2	-4.9993
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	131132698	133561399	1508	0.0523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	133563309	133563491	2	3.0178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	11	133564792	134142530	222	0.1213
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	12	889902	15619906	7771	0.0355
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	12	15620803	15620858	2	-4.2865
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	12	15623517	68534606	26241	0.0291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	12	68536065	68536874	2	-4.9962
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	12	68537441	133155338	35600	0.0419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	19450806	23975637	2150	-0.6136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	23981275	23981974	2	-6.8538
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	23982351	26724328	1287	-0.6161
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	26724447	26726079	4	-4.2952
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	26726184	29930603	2190	-0.5536
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	29933712	29933851	2	-6.0199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	29934659	38289973	5315	-0.5998
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	38290276	38305571	13	-3.1665
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	38305722	44857632	3954	-0.5928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	44858122	44860077	3	-5.4483
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	44860118	46275415	725	-0.5417
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	46276766	46277597	2	-5.8884
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	46278715	46882527	390	-0.6036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	46884271	46887593	2	-6.0509
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	46890447	47327255	258	-0.6922
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	47328301	47328514	2	-5.5352
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	47329324	60191864	5868	-0.6117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	60194328	60204989	4	-4.8819
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	60207248	69072699	3890	-0.6174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	69078564	69083181	2	-6.3406
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	69083590	71276189	1224	-0.622
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	71276540	71277509	2	-6.9686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	71280034	72489377	659	-0.6155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	72495698	72495956	4	-4.6921
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	72498388	74748799	1544	-0.6058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	74748926	74749643	2	-6.6087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	74749753	77396820	1743	-0.6034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	77397101	77397774	2	-5.4829
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	77398081	104672517	15948	-0.5892
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	104672548	104673511	3	-4.8762
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	104674158	105162568	364	-0.6589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	105162846	105162926	2	-6.0581
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	105164223	108405263	1854	-0.6016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	108405965	108406614	2	-5.7139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	108407188	110124099	1224	-0.6098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	110125743	110126630	5	-4.9987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	110129209	112980687	1777	-0.5353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	112982751	112982829	2	-5.2527
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	112986588	113053470	68	-0.5925
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	113053810	113053924	2	-4.4125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	113054863	114162635	392	-0.5481
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	114162802	114164912	6	1.3321
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	13	114167496	114987458	174	-0.6566
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	14	20501368	33917668	6647	0.0133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	14	33918155	33918337	2	-4.6403
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	14	33918760	105988038	39851	0.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	15	23687685	101884307	41739	0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	653459	5729106	1816	0.0449
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	5729870	5730516	6	-1.7457
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	5731945	6186577	385	0.1059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	6188504	6188571	2	-4.2276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	6190098	26681463	9067	0.0403
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	26681997	26683422	2	-5.8586
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	26684145	26954867	200	-0.0397
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	26955020	26958800	5	-2.5615
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	26959121	64432222	12332	0.0314
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	64434375	64443229	4	-3.4582
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	64447002	71373230	3355	0.0608
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	71373498	71374298	2	-3.5888
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	71376500	76334673	2631	0.0253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	76335199	76335822	2	-5.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	76336609	77317787	695	0.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	77318502	77318571	2	-5.4563
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	16	77319899	89379936	7647	0.0339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	17	987221	80917016	34580	0.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	329586	3326091	1111	0.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	3327241	3327801	3	-3.3028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	3328493	38053900	17711	0.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	38054372	38054525	2	-4.7847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	38069852	45131812	3973	0.0172
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	45132081	45132520	2	4.3871
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	45134328	52533076	4677	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	52535785	52536724	3	-4.0748
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	52543021	73362511	10494	0.0226
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	73363526	73363949	2	-4.0137
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	18	73366794	77109240	2231	0.0253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	19	284018	58878226	22236	0.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	20	455764	9591112	5054	0.0308
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	20	9592338	9592598	2	-5.5565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	20	9595173	52610973	23692	0.0383
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	20	52611540	52611872	2	4.6282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	20	52612549	62219837	6092	0.0482
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	15347621	21234580	3531	0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	21236964	21237021	2	-6.0589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	21237033	33171449	7232	0.0283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	33171697	33171831	2	-4.0416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	33172343	39282854	3683	0.0309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	39284637	39293864	6	-2.2511
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	21	39297562	47678295	4880	0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	17423930	17922735	257	-0.5798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	17922770	17930263	3	-4.7876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	17931483	27278882	2370	-0.5402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	27279702	27279749	2	-5.4422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	27280483	47661726	11681	-0.5076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	47661833	47664826	4	-5.7496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	47666711	47940908	180	-0.5035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	47941243	47941603	2	-5.5245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	22	47945421	49331012	1053	-0.536
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	3157107	3218352	39	-0.041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	3219041	3219343	2	-4.8574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	3220671	30531773	11733	-0.0721
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	30532491	30532864	4	-4.1897
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	30534899	79142458	16842	-0.0664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	79143088	79143155	2	-5.2171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	79143384	95996447	6263	-0.0548
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	95997051	95997341	2	-4.6247
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	96002993	96978197	510	-0.0919
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	96980630	96982541	5	-3.7004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	96983400	97009913	35	-0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	97010824	97011682	2	-6.0368
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	97012154	113294320	7592	-0.0481
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	113294346	113295450	2	-5.2224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	113296837	144054178	13210	-0.0382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	144058073	144058923	2	-5.7799
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	144059409	146968397	1807	-0.0641
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G01_228702	X	146975821	154905589	2708	0.8981
