Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	1	3208470	156699432	67832	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	1	156699609	156699698	3	-4.8444
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	1	156700919	165882542	6109	0.0179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	1	165883462	165888494	4	-3.2803
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	1	165888524	245880329	47582	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	2	474222	5715197	2640	0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	2	5715442	5715559	2	2.3192
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	2	5715693	7967432	1586	-0.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	2	7969406	7969589	2	-4.8071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	2	7971295	242124735	120283	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	2187571	43752349	23302	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	43757936	43759586	3	-2.611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	43759753	46701540	1646	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	46705753	46712983	2	2.4345
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	46716615	82838061	19858	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	82838682	82838867	2	-2.7969
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	82841433	135023573	24871	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	135024184	135024391	2	-5.5237
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	135024464	172280332	18324	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	172281488	172281618	2	-5.0739
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	3	172281820	199023074	12907	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	4	1043934	9949584	4442	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	4	9955343	9955648	2	-4.8669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	4	9956054	188150357	92894	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	4	188153570	188154024	2	-3.4616
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	4	188159738	189836143	485	-0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	5	967233	9612222	5846	-0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	5	9612903	9613030	2	-4.8071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	5	9613249	180293075	89449	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	959281	52328752	28863	0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	52328894	52330123	3	-4.3539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	52332217	57302077	2914	0.0174
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	57313879	57314189	2	-3.8117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	57314253	155208150	51508	-0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	155209066	155209126	2	-5.1269
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	155210058	155687147	273	-0.0305
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	155690271	155691347	2	-4.8808
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	155693032	169525676	7203	-0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	169530935	169531918	3	-3.2707
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	6	169531975	170745844	462	0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	7	671810	40726953	21926	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	7	40732974	40733140	2	-5.4274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	7	40735050	55399786	9109	0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	7	55405043	55407814	2	-6.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	7	55408269	158077879	45997	-0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	8	607667	143686392	76977	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	8	143687835	143688840	2	-3.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	8	143694569	145304484	387	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	9	779932	140058573	63973	-0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	405240	4058858	1953	-0.0223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	4058966	4059101	3	-1.9938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	4059215	6218620	1490	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	6218947	6222429	5	-2.0496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	6224630	7885304	1259	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	7885513	7886158	2	-3.3999
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	7886980	72425129	34642	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	72425160	72426336	2	3.5535
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	72427439	108573726	20442	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	108576087	108580272	4	-3.1098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	10	108580819	135075077	16276	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	446120	11653776	6037	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	11654603	11656559	2	-3.5443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	11657270	100692442	46326	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	100696376	100700084	5	-2.3288
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	100702398	133063491	20190	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	133066506	133066609	2	-2.7136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	133068519	133068701	2	2.9581
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	11	133070002	133647740	225	0.1098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	760163	53262828	26395	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	53264138	53266026	2	3.1524
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	53266342	70542569	9975	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	70546315	70550501	2	-4.6603
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	70550650	123360167	29888	-0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	123364366	123364808	3	3.1423
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	12	123365340	131665411	3564	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	13	18348806	24388514	2735	-0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	13	24392749	24393321	2	-2.6546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	13	24397783	27476748	1973	-0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	13	27482535	27482648	2	-5.7402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	13	27484220	114005560	48932	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	14	19571208	105059083	46654	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	21238778	56599161	17874	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	56599491	56600069	2	-2.7633
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	56601907	94719300	21360	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	94723091	94728761	3	-3.0523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	94728923	96049485	787	0.0311
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	96049527	96053778	5	-2.6526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	15	96054222	99701830	1858	0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	16	593460	24371715	9843	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	16	24373182	24373200	2	-4.1747
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	16	24373551	87907437	28483	-0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	17	933971	78510305	34645	6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	18	319586	75210228	40356	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	19	235018	5602889	1232	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	19	5603572	5603700	2	-4.8271
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	19	5610874	63570038	21041	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	20	403764	61690281	34958	0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	21	14269492	20172135	3550	-0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	21	20178450	20178674	2	-2.3876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	21	20182814	25105526	2773	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	21	25105595	25105958	2	-3.5799
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	21	25108310	46502723	13087	-0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	22	15803930	35734783	9167	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	22	35736280	35736347	2	2.5662
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	22	35736522	35911329	80	-0.0175
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	22	35911368	35911623	2	-4.7656
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	22	35911715	47717016	6472	0.0138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	X	3167107	107485907	40453	0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	X	107486302	107486342	2	-3.6998
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	X	107489585	128594522	9869	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	X	128595064	128595336	2	-3.0204
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G03_228734	X	128597089	154558783	10924	0.0106
