Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	3208470	16368357	6595	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	16368433	16368501	2	-4.5906
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	16370161	20024597	1920	-0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	20030828	20030921	2	-4.0872
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	20031191	47706110	13257	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	47710716	47715009	2	-4.6587
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	47716835	53560167	2837	-0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	53560221	53569371	3	-3.5472
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	53569489	112856459	34760	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	112856496	112860743	3	-4.8278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	112861756	156694175	8304	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	156699432	156699609	2	-3.9574
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	1	156699698	245880329	53619	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	474222	20248410	12122	0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	20249820	20252440	3	-2.9817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	20257050	55036454	17976	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	55036770	55037131	2	-4.8162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	55039898	73973170	10236	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	73973689	73974293	3	-3.8847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	2	73974844	242124735	83940	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	3	2187571	199023074	100768	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	1043934	5003712	1589	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	5003958	5015538	6	-2.6221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	5019681	9949584	2830	-0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	9955343	9955648	2	-4.1349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	9956054	16940992	4918	0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	16943901	16944125	2	-4.8706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	4	16944628	189836143	88332	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	967233	156961525	81870	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	156962973	156965361	2	-5.8941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	156971194	169829730	8100	0.001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	169830331	169830976	2	-4.2386
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	169837432	170904468	575	0.0235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	170905268	170905863	3	-2.4262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	170907226	179192640	4151	0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	179192819	179193557	4	-1.9313
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	5	179197337	180293075	462	-0.0546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	959281	1290648	309	-0.0356
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	1291541	1291561	2	-3.8944
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	1292118	7149735	3895	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	7153006	7162219	3	-3.7616
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	7167446	30986898	13557	0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	30990410	30995323	2	-5.2761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	30998850	108558586	38420	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	108565690	108566703	2	-4.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	108573717	169530935	34432	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	169531790	169531918	2	-6.4115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	6	169531975	170745844	461	0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	671810	20470490	9088	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	20472348	20472770	4	-2.6738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	20482871	48896149	17473	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	48896160	48896760	2	-4.1349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	48899553	137381118	40660	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	137381958	137382749	2	-4.0532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	137384533	147872872	5069	0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	147874283	147874668	2	-3.2227
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	147875501	151185554	1392	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	151186459	151189245	3	-3.2086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	151189930	155816006	2201	-0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	155820725	155820767	2	-5.4105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	7	155828503	158077879	1007	-0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	8	607667	96261210	49403	-2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	8	96263071	96264347	3	-3.2499
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	8	96266831	145304484	27820	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	9	779932	13520487	6407	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	9	13520515	13520711	2	-5.9274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	9	13521732	140058573	57472	-0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	10	405240	102922425	56614	-0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	10	102926869	102928178	2	-5.0573
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	10	102928513	125702317	14391	0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	10	125715799	125718054	2	3.2423
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	10	125718076	135075077	4918	-0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	446120	1979288	388	-0.0319
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	1979380	1981259	3	-5.5234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	1984664	59884747	30599	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	59884897	59902398	5	-3.1563
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	59905573	130623828	39915	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	130625968	130626725	4	-3.3328
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	130637908	130971234	275	0.0403
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	130973004	130973066	2	-6.5368
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	130978044	133066609	1236	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	133068519	133068701	2	-4.4547
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	11	133070002	133645362	223	0.0448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	12	760163	114840858	61926	-0.0046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	12	114841090	114855703	5	-3.3957
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	12	114855724	123599854	4313	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	12	123599886	123601656	4	-3.842
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	12	123604249	131665411	3464	-0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	18348806	89276372	38588	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	89278384	89285156	2	-5.5833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	89289160	89304790	13	-0.0987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	89305689	89307006	2	-2.6743
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	89307239	101145914	7240	-0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	101146706	101147035	2	-3.4895
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	13	101148882	114005560	7674	-0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	14	19571208	36355107	8623	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	14	36356972	36357355	2	-6.3277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	14	36360856	105059083	37988	0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	15	21238778	91446830	37408	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	15	91448829	91450443	2	-5.6977
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	15	91450748	96049485	2540	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	15	96049527	96049742	2	-4.4831
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	15	96051503	99701830	1862	0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	16	593460	87907437	38239	-0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	17	933971	72729603	32563	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	17	72729661	72731882	2	-6.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	17	72737160	78510305	2033	-0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	18	319586	52895843	28762	8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	18	52896404	52897154	2	-6.6087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	18	52897216	75210228	11509	-0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	19	235018	63171623	22042	0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	19	63171656	63175521	3	-3.454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	19	63176958	63264771	39	-0.052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	19	63264932	63267612	4	-1.3049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	19	63268756	63570038	168	-0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	20	403764	44350380	24020	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	20	44354555	44354606	2	-5.8659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	20	44355592	61690281	10853	-0.0015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	14269492	15286027	604	0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	15286793	15290124	2	-5.5012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	15290428	36273111	12779	-4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	36273176	36275261	3	-3.7834
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	36275310	36939193	319	0.0035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	36942057	36942176	2	-3.7457
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	36942867	38102032	663	-0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	38102522	38110247	11	-1.1813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	38110476	39302119	961	0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	39302693	39304254	3	-3.3376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	21	39304649	46502723	4032	-0.0099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	22	15803930	47717016	15683	0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	X	3167107	12091974	2761	0.0163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	X	12095803	12095951	2	-5.1382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	X	12096519	133285555	49436	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	X	133287574	133292529	4	-2.9462
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G05_228766	X	133292576	154558783	8932	0.0157
