Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	51598	702408	36	-0.3886
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	708526	12761331	5998	0.0672
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	12762163	13590359	89	0.588
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	13590411	72541006	34144	0.0207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	72541086	72583736	47	1.0266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	72584492	150822151	32153	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	150822330	150846449	28	-1.0491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	150852342	151026302	170	0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	151028547	151050879	50	0.6657
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	151054049	191345037	25550	0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	191348772	191349506	2	-3.8279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	191350071	196361045	3179	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	196362423	196362503	2	-4.889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	196365863	197374325	644	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	197377986	197380463	9	-3.0526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	197380861	201428268	2504	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	201432734	203862376	1619	2.9906
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	203865733	221710884	11589	0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	221711029	221711879	4	2.2052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	221711984	226580341	2721	0.0233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	226593913	226709694	39	0.6653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	226710265	236166244	6596	0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	236167118	236279069	70	-0.7754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	236279328	247191011	7252	0.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	2784	109325563	65135	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	109326183	109326512	2	4.8004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	109328729	127559013	9998	-0.0152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	127559112	127577300	10	1.2505
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	127578376	154617139	15705	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	154617398	154663180	26	-1.0619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	154663611	242738129	51632	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	35345	26589978	18837	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	26589980	26589988	6	-2.0859
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	26589989	68814718	26367	0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	68828854	68831931	23	0.9061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	68831947	75503860	4613	0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	75509797	75721431	70	-1.3293
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	75722197	185230622	60182	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	185232425	185301849	39	0.7728
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	185302660	191032117	3739	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	191032895	191034855	2	-4.6296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	191035065	194363167	2271	0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	194363281	194365597	12	-1.5405
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	194369129	199380515	2538	0.0894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	2281	936453	381	0.1052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	936974	946047	2	4.5507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	954359	9832726	4986	0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	9832946	9838406	12	-2.5785
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	9838728	34455449	16228	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	34462895	34501120	38	-2.5376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	34506267	36523454	1266	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	36524951	36527245	6	-2.3062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	36527650	69043083	17299	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	69049737	69406991	76	0.5162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	69408681	126214294	32723	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	126215810	126216263	2	-5.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	126216411	190780142	38816	0.0026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	190782353	190782665	2	-4.179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	190788098	191261904	178	-0.065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	68532	2632136	1427	0.0971
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	2632462	2633144	2	3.9173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	2633455	135434162	78013	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	135434433	135434557	2	3.9747
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	135437581	178989201	27070	0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	178991287	179037873	45	0.7949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	179037934	180722926	827	0.0873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	94661	24207747	17325	0.0175
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	24209826	24210702	2	-3.5453
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	24212254	26135412	1287	-0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	26141485	26141807	4	-2.5636
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	26145828	32515131	2829	0.0618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32516505	32535767	10	1.3516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32537572	32609277	33	-0.0891
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32616454	32638122	7	-1.7645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32638276	34045977	780	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	34046721	34050683	7	1.5733
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	34052564	66404731	17036	0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	66405150	66405343	2	-3.3009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	66409322	67058797	403	-0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	67058910	67068099	9	-2.5902
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	67068322	67105350	49	-0.5883
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	67106127	71783440	2983	0.0079
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	71784285	71785740	3	2.0482
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	71789723	72086412	205	-0.0827
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	72090767	72091913	3	2.9006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	72093997	79028553	4255	0.0169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	79028807	79084234	97	-0.8127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	79084489	166871129	54294	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	166871594	166991938	108	-0.6836
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	166992493	168270868	724	0.1046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	168277753	168278336	3	3.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	168278364	170892930	1619	0.0525
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	52911	54828910	36915	0.3803
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	54829897	55091046	232	3.3427
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55094406	55098494	14	4.9165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55100497	55153329	101	3.2325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55153384	55169611	25	1.5543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55170003	55192821	45	0.7315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55192895	55291813	83	2.9231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55294004	97233398	20333	0.3995
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	97233401	97240411	14	-1.1893
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	97242176	141409593	25408	0.3931
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	141416112	141438377	40	-2.0234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	141438576	142154515	428	0.5093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	142156294	142156508	3	2.4832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	142158992	142186562	30	1.2248
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	142188690	153236666	6405	0.4279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	153237274	153237978	4	-2.1589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	153238171	155815796	1809	0.4099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	155820725	155820767	2	3.9118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	155828503	158819765	1707	0.4339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	21254	584973	311	0.1007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	585220	585908	8	3.5835
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	591043	2164910	1161	0.0476
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	2166003	2166214	2	3.6631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	2166935	39349816	27587	0.0151
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	39354760	39506122	56	-1.8771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	39507456	40586173	817	0.0307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40588400	40589270	3	-2.5412
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40594149	40891153	208	0.1212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40897009	40897628	2	-2.737
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40902837	41509670	354	-0.0308
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	41510290	41510745	2	2.5233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	41515724	47167018	1147	0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	47169399	47294570	33	0.6631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	47298479	55528172	4555	0.0099
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	55528232	55528483	4	2.3344
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	55528623	65011190	5958	-0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	65011451	65011672	6	2.5726
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	65012064	115700470	28941	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	115700612	115710907	37	-0.765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	115719873	146268959	19909	0.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	36587	2529051	2582	0.048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	2529222	2530325	5	2.8519
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	2533888	21428684	15429	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	21434143	21711939	223	-0.6478
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	21717208	22439925	461	-2.0132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	22445518	27678290	3559	-0.6746
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	27678488	140211215	53034	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	62809	4948591	3991	-0.5783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	4948841	4951021	2	-6.9771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	4952583	16528710	8857	-0.5984
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	16531923	16547230	6	-4.1323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	16551302	19683205	2087	-0.6182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19684689	19685158	4	-4.209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19685245	19773390	68	-0.6893
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19780302	19780641	4	-4.1523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19782387	26350685	4236	-0.6163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	26351223	26352830	3	-4.6207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	26353343	44141226	9417	-0.5987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	44141393	44141778	2	4.8082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	44143124	51759574	2986	-0.5286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	51759625	51764653	4	-3.7377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	51765276	52064779	252	-0.6854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52066765	52127505	28	0.1801
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52131469	52377479	102	-0.6211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52379270	52380078	4	-5.1988
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52381158	66978715	9977	-0.6552
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	66978743	66984436	20	-2.5136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	66984452	68107070	826	-0.7021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	68107621	68108810	3	-3.8489
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	68109008	133321506	41672	-0.5818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	133322525	133324068	7	-4.6048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	133330557	135356694	884	-0.3581
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	188572	9137977	5398	0.0253
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	9138795	9140329	2	-4.5671
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	9141270	14923167	4061	0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	14924186	14928183	3	-3.9964
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	14928381	48331189	22013	0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	48335526	48931204	192	-0.7455
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	48932932	88018176	19213	0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	88019997	88020266	5	2.3038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	88021766	133322866	30578	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	133323307	133324652	2	3.6316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	133327936	134449982	785	0.2304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	20703	10213449	6258	0.0498
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	10219902	10226508	4	1.6187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	10226773	11110690	562	-0.0276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11111991	11148096	14	-1.2539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11151542	11403759	128	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11403798	11434673	28	-0.7284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11443459	33185927	14592	0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	33192673	33198641	27	-1.6291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	33199627	51731192	9516	0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	51735819	51803246	34	0.8385
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	51809408	98319868	27975	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	98319904	98322865	27	-1.335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	98327224	99260894	501	0.0296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	99267170	99474502	100	-0.6109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	99474515	132288262	20693	0.0399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	17924949	35350463	11652	0.017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	35351926	35366492	19	-1.0285
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	35368177	35407634	39	0.0543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	35413298	55749295	12414	-0.6239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	55749973	55752014	3	-4.7136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	55756707	73055166	10205	-0.6783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	73055321	73055918	3	-4.6651
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	73061231	77646746	3055	-0.6196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	77646766	77653602	8	-1.2941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	77655469	81198779	2198	0.0296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	81198871	81313456	69	-0.7149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	81315112	82740295	869	-0.0188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	82740523	82760863	17	-0.9681
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	82764824	83173581	246	-0.0292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	83173932	84288089	637	-0.6714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	84288921	103201247	12105	0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	103201309	103201582	4	-1.3804
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	103201599	103205392	12	-0.5656
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	103205407	103205543	3	-1.8178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	103205664	114126499	7224	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	18072124	18611714	39	-0.4742
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	18627041	18730853	8	1.3616
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	18759317	18763249	3	-1.5738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	18767885	19494766	137	0.6233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	19495349	106356482	52343	0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	15	18276341	83225425	37039	0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	15	83226101	83279922	33	0.666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	15	83280975	100286563	12003	0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	777	6404895	3371	0.0885
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	6406253	6652187	291	-0.5611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	6655197	21715368	9975	0.0669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	21724961	21725436	2	-3.1696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	21727915	27711252	3720	0.0188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	27711388	27750325	40	0.9032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	27750645	79718535	25137	0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	79718584	79719238	2	4.2681
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	79719265	88815036	6804	0.1103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	526	18299671	10665	0.0485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	18299674	18405946	27	-0.9546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	18409922	26029280	3156	0.0446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	26035568	26078481	12	1.3828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	26079705	50108319	12827	0.0436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	50109556	50112271	2	-3.286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	50115525	75865101	14720	0.0456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	75865249	75878492	10	1.4407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	75885376	78643088	1077	0.0496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	1543	43385810	25886	0.0073
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	43386079	43386518	2	3.9697
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	43388326	54239182	7147	0.0218
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	54246632	54247758	2	4.024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	54250472	60018672	3990	0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60021128	60073854	25	-0.8855
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60074555	60392873	201	0.2982
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60393372	60406673	11	-0.2442
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60408391	60420251	3	1.1425
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60424413	60476564	28	-0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60477713	60710397	185	-0.7759
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	60713938	67938359	4947	-0.0312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	67939589	71802321	2909	-0.6706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	71803382	76115554	2742	0.0217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	41910	22530474	9513	0.1522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	22531602	22531944	2	-4.4417
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	22532965	53038072	12086	0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	53038274	53046835	2	3.619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	53047201	60974181	4135	0.0936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	60974347	60974879	3	-2.3702
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	60978105	63789666	1718	0.046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	9305	926920	681	0.5053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	927171	946167	14	1.5948
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	946383	1508288	415	0.4735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1508543	1516083	15	1.194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1518737	1538534	31	-0.2353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1541849	1541893	2	-3.2889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1545946	3633976	1397	0.356
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	3635687	3639520	2	2.0692
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	3644808	4034297	208	0.6847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	4034314	4052120	15	1.4747
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	4056015	62426597	37193	0.411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	21	9758742	37130997	16318	-0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	21	37133883	37134154	3	-3.3761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	21	37137206	46921385	6710	0.0426
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	14432528	15254810	98	0.0517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	15257135	15544625	85	-0.6257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	15546276	37658664	14346	0.0928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	37659539	37729258	55	0.65
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	37733740	39086986	617	0.0294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	39087174	40619263	865	-0.5085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	40626614	40705250	40	0.3659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	40708519	41106870	196	-0.5123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	41111567	41309995	93	0.2407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	41312516	48918710	5308	-0.4658
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	48924202	49581321	245	0.0601
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	108477	2721961	103	0.2694
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	2722283	2722661	2	5.2158
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	2722915	9176876	4651	-0.0613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	9177351	9177483	2	-5.2826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	9177822	22424473	8092	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	22424700	22425871	3	-4.8327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	22426261	26118856	2396	-0.0393
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	26120238	26120507	2	5.1618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	26128583	29445427	2021	-0.0618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	29445757	29446046	3	-5.7959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	29446164	32228620	1780	-0.058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	32230815	32288313	41	-1.3669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	32289057	64940220	14138	-0.0657
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	64940669	64959763	9	-2.8262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	64962429	71147754	2870	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	71149819	71150279	2	-5.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	71150653	74231906	1218	-0.0207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	74232729	74252140	11	-1.5567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	74252731	79253600	2273	-0.0432
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	79253979	79254246	2	-5.1035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	79255365	92931158	6989	-0.0719
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	92935755	93071535	75	-1.9754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	93072493	144944424	28555	-0.0486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	144944562	144952050	7	3.1941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	144952068	153219925	4980	-0.0294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153220619	153274213	58	0.9575
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153274581	153616462	121	0.0634
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153616950	153622146	6	1.7093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153623789	154835548	414	-0.0608
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	Y	2710438	57427647	8523	-0.962
