Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	61735	712545	36	-0.3886
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	718663	12838744	5998	0.0672
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	12839576	13717772	89	0.588
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	13717824	72768418	34208	0.0212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	72768498	72811148	47	1.0266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	72811904	152555527	32140	0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	152555706	152579825	28	-1.0491
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	152585718	152759678	170	0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	152761923	152784255	50	0.6657
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	152787425	193078414	25548	0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	193082149	193082883	2	-3.8279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	193083448	198094422	3179	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	198095800	198095880	2	-4.889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	198099240	199107702	644	0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	199111363	199113840	9	-3.0526
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	199114238	203161645	2504	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	203166111	205595753	1619	2.9906
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	205599110	223644261	11590	0.0194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	223644406	223645256	4	2.2052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	223645361	228513718	2720	0.024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	228527290	228643071	39	0.6653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	228643642	238099621	6595	0.0154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	238100495	238212446	70	-0.7754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	1	238212705	249224388	7251	0.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	12784	109959131	65125	0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	109959751	109960080	2	4.8004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	109962297	127842543	9997	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	127842642	127860830	10	1.2505
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	127861906	154908893	15702	0.0135
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	154909152	154954934	26	-1.0619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	2	154955365	243089456	51636	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	60345	26614974	18838	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	26614976	26614984	6	-2.0859
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	26614985	68732028	26367	0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	68746164	68749241	23	0.9061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	68749257	75421170	4612	0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	75427107	75638741	70	-1.3293
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	75639507	183747928	60178	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	183749731	183819155	39	0.7728
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	183819966	189549423	3739	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	189550201	189552161	2	-4.6296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	189552371	192880473	2271	0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	192880587	192882903	12	-1.5405
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	3	192886435	197896118	2538	0.0894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	12281	946453	381	0.1052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	946974	956047	2	4.5507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	964359	10223628	4986	0.0173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	10223848	10229308	12	-2.5785
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	10229630	34779054	16228	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	34786500	34824725	38	-2.5376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	34829872	36847059	1266	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	36848556	36850850	6	-2.3062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	36851255	69360489	17302	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	69367142	69528959	71	0.4638
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	69536788	69540025	3	1.954
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	69551744	125994844	32726	-0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	125996360	125996813	2	-5.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	125996961	190543148	38816	0.0025
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	190545359	190545671	2	-4.179
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	4	190551104	191027923	178	-0.065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	15532	2579136	1427	0.0971
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	2579462	2580144	2	3.9173
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	2580455	135406263	78013	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	135406534	135406658	2	3.9747
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	135409682	179056595	27071	0.0192
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	179058681	179105267	45	0.7949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	5	179105328	180790320	827	0.0873
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	149661	24099768	17324	0.0176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	24101847	24102723	2	-3.5453
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	24104275	26027433	1287	-0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	26033506	26033828	4	-2.5636
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	26037849	32407153	2829	0.0618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32408527	32427789	10	1.3516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32429594	32501299	33	-0.0891
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32508476	32530144	7	-1.7645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	32530298	66348010	17825	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	66348429	66348622	2	-3.3009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	66352601	66403753	45	0.1286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	66403766	66423054	17	-0.6894
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	66426643	67002076	341	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	67002189	67011378	9	-2.5902
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	67011601	67048629	49	-0.5883
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	67049406	71726719	2983	0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	71727564	71729019	3	2.0482
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	71733002	72029691	205	-0.0827
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	72034046	72035192	3	2.9006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	72037276	78971834	4253	0.0166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	78972088	79027515	97	-0.8127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	79027770	166951139	54300	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	166951604	167071948	108	-0.6836
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	167072503	168528019	724	0.1046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	168534904	168535487	3	3.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	6	168535515	171051005	1619	0.0525
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	43355	54861416	36911	0.3802
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	54862403	55123552	232	3.3427
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55126912	55131000	14	4.9165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55133003	55185835	101	3.2325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55185890	55202117	25	1.5543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55202509	55225327	45	0.7315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55225401	55324319	83	2.9231
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	55326510	97395462	20338	0.3994
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	97395465	97402475	14	-1.1893
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	97404240	141763124	25411	0.393
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	141769643	141770532	9	-1.5005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	141770627	141781794	6	-4.7233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	141782110	141791908	25	-1.5637
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	141792107	142474939	428	0.5093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	142476719	142476933	3	2.4832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	142479416	142486560	28	1.2257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	142488688	153605733	6404	0.4278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	153606341	153607045	4	-2.1589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	153607238	156123035	1811	0.4098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	156127964	156128006	2	3.9118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	7	156135742	159127004	1707	0.4339
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	31254	594973	311	0.1007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	595220	595908	8	3.5835
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	601043	2177503	1162	0.0479
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	2178596	2178807	2	3.6631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	2179528	2246543	27	0.3065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	2246686	2270328	19	-0.8584
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	2270705	5950706	4595	-0.0337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	5950845	5955490	10	-0.8409
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	5955536	39230659	22936	0.0258
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	39235603	39386965	56	-1.8771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	39388299	40467016	817	0.0307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40469243	40470113	3	-2.5412
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40474992	40771996	208	0.1212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40777852	40778471	2	-2.737
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	40783680	41390513	354	-0.0308
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	41391133	41391588	2	2.5233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	41396567	47047853	1147	0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	47050234	47175405	33	0.6631
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	47179314	55365619	4554	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	55365679	55365930	4	2.3344
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	55366070	64848636	5960	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	64848897	64849118	6	2.5726
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	64849510	115631294	28947	0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	115631436	115641731	37	-0.765
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	8	115650697	146298155	19908	0.0275
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	46587	2539051	2584	0.0478
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	2539222	2540325	5	2.8519
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	2543888	21438684	15431	2e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	21444143	21721939	223	-0.6478
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	21727208	22449925	461	-2.0132
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	22455518	27688290	3558	-0.674
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	9	27688488	141091394	53045	0.0033
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	72809	4958591	3991	-0.5783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	4958841	4961021	2	-6.9771
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	4962583	16488704	8857	-0.5984
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	16491917	16507224	6	-4.1323
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	16511296	19643199	2087	-0.6182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19644683	19645152	4	-4.209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19645239	19733384	68	-0.6893
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19740296	19740635	4	-4.1523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	19742381	26310679	4235	-0.6163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	26311217	26312824	3	-4.6207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	26313337	44821220	9417	-0.5987
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	44821387	44821772	2	4.8082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	44823118	52089568	2986	-0.528
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52089619	52094647	4	-3.7377
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52095270	52394773	252	-0.6854
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52396759	52457499	28	0.1801
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52461463	52707473	102	-0.6211
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52709264	52710072	4	-5.1988
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	52711152	67308709	9977	-0.655
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	67308737	67314430	20	-2.5136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	67314446	68437064	826	-0.7021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	68437615	68438804	3	-3.8489
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	68439002	133471516	41671	-0.5817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	133472535	133474078	7	-4.6048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	10	133480567	135506704	884	-0.3581
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	198572	9181401	5397	0.0254
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	9182219	9183753	2	-4.5671
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	9184694	14966591	4061	0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	14967610	14971607	3	-3.9964
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	14971805	48374613	22010	0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	48378950	48974628	192	-0.7455
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	48976356	88378528	19214	0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	88380349	88380618	5	2.3038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	88382118	133817656	30572	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	133818097	133819442	2	3.6316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	11	133822726	134944770	785	0.2304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	150442	10322182	6258	0.0496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	10328635	10335241	4	1.6187
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	10335506	11219423	562	-0.0276
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11220724	11256829	14	-1.2539
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11260275	11512492	128	0.0059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11512531	11543406	28	-0.7284
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	11552192	33294660	14589	0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	33301406	33307374	27	-1.6291
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	33308360	53444925	9515	0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	53449552	53516979	34	0.8385
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	53523141	99795737	27974	0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	99795773	99798734	27	-1.335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	99803093	100736763	501	0.0296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	100743039	100950371	100	-0.6109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	12	100950384	133778189	20691	0.0399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	19026949	36452463	11650	0.017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	36453926	36468492	19	-1.0285
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	36470177	36509634	39	0.0543
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	36515298	38924871	1620	-0.648
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	38927410	38927888	2	-5.2566
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	38931144	56851294	10792	-0.6195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	56851972	56854013	3	-4.7136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	56858706	74157165	10204	-0.6783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	74157320	74157917	3	-4.6651
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	74163230	78748745	3055	-0.6196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	78748765	78755601	8	-1.2941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	78757468	82300778	2198	0.0296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	82300870	82415455	69	-0.7149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	82417111	83842294	869	-0.0188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	83842522	83862862	17	-0.9681
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	83866823	84275580	246	-0.0292
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	84275931	85390088	637	-0.6714
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	85390920	104403246	12104	0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	104403308	104403581	4	-1.3804
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	104403598	104407391	12	-0.5656
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	104407406	104407542	3	-1.8178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	13	104407663	115108397	7224	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	19002124	19541714	39	-0.4742
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	19557041	19660853	8	1.3616
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	19689317	19693249	3	-1.5738
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	19697885	20424926	137	0.6233
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	14	20425509	107285437	52340	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	15	20016328	85424421	37038	0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	15	85425097	85478918	33	0.666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	15	85479971	102469040	12002	0.0285
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	60777	6464894	3370	0.0878
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	6466252	6712186	291	-0.5611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	6715196	21807867	9975	0.0669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	21817460	21817935	2	-3.1696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	21820414	27803751	3720	0.0188
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	27803887	27842824	40	0.9032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	27843144	81161034	25069	0.0281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	81161083	81161737	2	4.2681
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	16	81161764	90287535	6806	0.1105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	526	18358946	10666	0.0485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	18358949	18465221	27	-0.9546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	18469197	29005154	3156	0.0446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	29011442	29054355	12	1.3828
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	29055579	52753320	12826	0.0436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	52754557	52757272	2	-3.286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	52760526	78250506	14720	0.0456
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	78250654	78263897	10	1.4407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	17	78270781	81049726	1077	0.0496
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	11543	45131812	25886	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	45132081	45132520	2	3.9697
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	45134328	56088202	7146	0.0219
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	56095652	56096778	2	4.024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	56099492	61867692	3991	0.0149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	61870148	61922874	25	-0.8855
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	61923575	62246709	203	0.2986
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	62250410	62255693	8	-0.3853
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	62257411	62269271	3	1.1425
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	62273433	62325584	28	-0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	62326733	62559417	185	-0.7759
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	62562958	69787379	4946	-0.0312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	69788609	73673333	2909	-0.6706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	18	73674394	78014582	2742	0.0217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	90910	22738634	9512	0.1522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	22739762	22740104	2	-4.4417
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	22741125	48346260	12086	0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	48346462	48355023	2	3.619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	48355389	56282369	4135	0.0936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	56282535	56283067	3	-2.3702
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	19	56286293	59097854	1718	0.046
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	61305	978920	681	0.5053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	979171	998167	14	1.5948
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	998383	1560288	415	0.4735
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1560543	1568083	15	1.194
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1570737	1590534	31	-0.2353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1593849	1593893	2	-3.2889
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	1597946	4086297	1608	0.4006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	4086314	4104120	15	1.4747
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	20	4108015	62956153	37194	0.411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	21	10736871	38209127	16319	-0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	21	38212013	38212284	3	-3.3761
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	21	38215336	48096957	6709	0.0427
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	16052528	16874810	98	0.0517
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	16877135	17164625	85	-0.6257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	17166276	39328718	14345	0.0928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	39329593	39399312	55	0.65
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	39403794	40757040	617	0.0294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	40757228	42289317	865	-0.5085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	42296668	42375304	40	0.3659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	42378573	42776926	196	-0.5123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	42781623	42980051	93	0.2407
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	42982572	50576583	5308	-0.4658
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	22	50582075	51234455	245	0.0601
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	168477	2711961	103	0.2694
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	2712283	2712661	2	5.2158
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	2712915	9216876	4651	-0.0611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	9217351	9217483	2	-5.2826
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	9217822	22514552	8092	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	22514779	22515950	3	-4.8327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	22516340	26208935	2397	-0.0392
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	26210317	26210586	2	5.1618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	26218662	29535506	2021	-0.0618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	29535836	29536125	3	-5.7959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	29536243	32318699	1780	-0.059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	32320894	32378392	41	-1.3669
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	32379136	65023495	14143	-0.0651
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	65023944	65043038	9	-2.8262
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	65045704	71231029	2873	-0.012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	71233094	71233554	2	-5.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	71233928	74315181	1219	-0.0207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	74316004	74335415	11	-1.5567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	74336006	79366944	2272	-0.0438
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	79367323	79367590	2	-5.1035
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	79368709	93044502	6961	-0.0667
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	93049099	93184879	75	-1.9754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	93185837	145136732	28563	-0.0486
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	145136870	145144358	7	3.1941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	145144376	153566731	4979	-0.0293
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153567425	153621019	58	0.9575
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153621387	153963268	121	0.0634
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153963756	153968952	6	1.7093
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	X	153970595	155182354	415	-0.0614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G08_228814	Y	2650438	59018259	8563	-0.9633
