Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	3208470	91781471	48014	0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	91784742	91784777	2	-6.205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	91786113	101352922	5463	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	101353071	101355281	3	-2.5968
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	101356251	165882542	20540	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	165883462	165888494	4	-3.6979
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	165888524	210421035	26241	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	210422594	210423624	2	-4.8833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	210424829	233142552	13955	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	233145561	233145580	2	4.7934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	1	233146489	245880329	7425	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	2	474222	170340174	85552	0.0039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	2	170340732	170341053	3	-4.6138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	2	170344362	242124735	39104	3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	3	2187571	58244008	30695	0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	3	58244551	58244606	2	-4.4988
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	3	58244791	187384064	64434	-0.0027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	3	187384127	187384724	2	3.2546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	3	187385251	199023074	5856	-0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	1043934	9930061	4450	0.0286
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	9933258	9945130	2	-3.5827
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	9948524	151073118	74175	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	151073338	151073646	2	-5.9686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	151073717	188150357	18777	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	188153570	188154024	2	-4.5123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	4	188159738	189836143	487	0.0067
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	967233	4134510	1823	0.0131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	4137944	4138070	2	-2.8976
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	4140854	168652669	87520	0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	168653626	168653770	2	-4.0637
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	168655237	172340397	2154	0.0157
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	172341138	172345159	2	-2.4347
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	172345280	172655938	119	-0.0594
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	172656587	172656852	3	-4.0937
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	5	172656880	180293075	3751	0.0182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	6	959281	3860449	1995	-0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	6	3860790	3862536	2	2.3792
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	6	3864214	7149735	2227	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	6	7153006	7162219	3	-3.7934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	6	7167446	170745844	87077	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	7	671810	63752115	31909	0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	7	63754757	63766551	2	-5.7936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	7	63766795	79711900	6377	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	7	79712285	79712403	2	-3.7677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	7	79713521	158077879	38802	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	607667	4088966	1665	-0.0206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	4089356	4094020	10	-1.1571
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	4099262	8776278	1605	-0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	8776866	8776924	2	-4.5105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	8784561	56363676	24498	0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	56369808	56369870	2	3.2536
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	56370015	70221525	7727	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	70222057	70222138	2	-4.7632
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	8	70222667	145304484	41903	0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	779932	34556969	19587	-0.006
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	34557200	34557214	2	2.9091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	34558400	92128827	16868	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	92129735	92131154	2	-5.0376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	92133198	128309154	22381	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	128309299	128309667	2	-3.4012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	128310198	134131214	2944	0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	134133071	134147575	13	-1.2876
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	134147852	136793484	1271	0.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	136793538	136793557	2	2.7209
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	9	136794509	140058573	977	0.0684
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	10	405240	135075077	76172	0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	11	446120	2060935	424	-0.049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	11	2061791	2068107	3	-2.7674
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	11	2075695	64068424	32472	-8e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	11	64068729	64068979	2	-5.4591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	11	64069867	133647740	39964	0.0045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	12	760163	3874725	1437	0.0393
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	12	3875200	3875284	2	-4.8389
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	12	3878645	131665411	68467	0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	13	18348806	47093069	17101	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	13	47093128	47093779	3	-3.8215
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	13	47095421	107356912	32979	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	13	107357007	107357047	2	-3.3614
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	13	107357249	114005560	3593	0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	14	19571208	73998077	28723	0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	14	73999855	74002529	2	-2.9728
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	14	74009682	105059083	17973	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	15	21238778	99701830	41944	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	16	593460	27366401	11872	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	16	27371377	27374479	2	3.9429
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	16	27377050	63529205	12447	0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	16	63529665	63532649	2	-3.858
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	16	63532702	87907437	14070	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	17	933971	5060996	1652	-0.0052
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	17	5065632	5079237	2	7.6591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	17	5082524	67932668	29060	0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	17	67932773	67933633	3	-3.2684
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	17	67935196	78510305	3994	0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	18	319586	75210228	40390	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	19	235018	63570038	22337	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	20	403764	61690281	35035	0.0069
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	14269492	34184029	12027	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	34186244	34186267	2	-3.4162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	34186544	43387297	6281	0.0018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	43388081	43388754	4	-2.1832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	43390648	44451085	370	-0.0016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	44452404	44467640	2	3.2654
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	21	44467862	46502723	738	0.0441
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	22	15803930	47717016	15749	0.0166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	3167107	12085627	2745	-0.0159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	12085766	12086976	6	3.993
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	12087564	12408666	297	0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	12408804	12409202	4	-3.7554
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	12409391	39174015	12430	-0.0299
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	39175061	39175200	2	-5.1897
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	39175568	98335628	20919	-0.0257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	98336339	98338720	2	5.4905
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_G11_228862	X	98339357	154558783	24753	-0.0389
