Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	51598	20445041	10286	0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	20445116	20445481	5	-5.2208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	20446233	23583963	1727	-0.0325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	23584925	23585212	3	2.4361
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	23586962	25333188	906	-0.062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	25334666	25348005	10	-1.9923
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	25351439	72535958	27005	-0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	72541006	72584492	49	1.2059
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	72585028	82472392	6065	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	82478135	82484701	6	-2.77
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	82485481	100716707	11162	-0.0028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	100716850	100716969	2	-5.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	100718368	103933882	1833	-0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	103957166	104117274	53	0.6318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	104118420	105460029	661	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105460586	105464488	3	-6.561
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105468009	105548181	43	0.1618
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105549628	105549691	2	-4.5223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105552292	150804578	12108	-0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	150804659	150860547	77	0.5687
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	150860993	155858657	2598	-0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	155860498	155860713	3	-2.8492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	155862016	156176332	219	4e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	156177903	156178141	2	-4.2327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	156180578	157117197	725	0.0162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	157119144	157121392	3	-3.6309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	157133096	157269013	91	0.1184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	157269402	157273371	3	-4.8278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	157276777	160197100	1686	-0.0205
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	160197354	160197884	5	-5.5884
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	160199672	197374325	24093	-0.0055
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	197377986	197380463	9	-2.6682
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	197380861	204866487	4463	-0.024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	204868570	204869063	2	-4.2245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	204869724	209232971	3119	-0.0158
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	209235257	209235616	2	-3.6454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	209250691	220854685	7503	-0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	220861741	220862392	2	-4.3695
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	220864085	239067435	11935	-0.0152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	239069843	239070097	3	-3.6816
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	239071305	243882746	3147	-0.0131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	243882970	243883323	2	-3.2341
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	243883422	244724622	608	0.0659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	244730657	244731257	3	-3.5653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	244731705	247191011	1356	0.0482
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	2784	15620889	11041	-0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	15622395	15622495	2	-5.9307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	15623139	18025549	1674	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	18037156	18055751	40	-0.9147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	18056230	30717830	7444	-0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	30722446	30725568	3	-6.8699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	30732453	34544573	2354	-0.0085
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	34554898	34590561	45	0.7279
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	34590667	35278468	424	0.0443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	35283290	35283355	2	-3.5332
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	35284059	36031459	554	0.0865
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	36033627	36033746	4	-5.1481
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	36038163	49099087	8846	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	49101241	49101336	2	-4.532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	49103279	52680891	2443	0.0261
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	52682617	52708071	9	-1.4699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	52711945	53510181	643	0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	53510892	53511205	2	-6.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	53513571	79369712	15649	-0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	79370094	79370641	2	-7.3371
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	79370854	106248065	11738	0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	106249661	106275805	21	-1.655
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	106276024	106914209	351	-0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	106917118	106920352	2	-6.0493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	106921678	136748868	16352	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	136753589	136757836	7	-3.0813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	136759546	137054669	233	-0.0462
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	137055410	137055474	2	4.0277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	137056562	153032878	9463	0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	153033048	153041759	4	-2.8452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	153045775	170706056	10158	-7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	170706067	170707422	4	-5.9327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	170710806	242738129	42185	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	35345	59593809	37780	-0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	59593878	59595707	2	-6.8162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	59597150	60316742	796	0.0619
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	60319230	60324502	2	-3.3336
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	60325749	60408880	89	0.2372
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	60409162	60409922	3	-2.6449
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	60416381	62948163	2150	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	62952892	62954797	2	-3.9464
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	62956954	72364912	6670	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	72365255	72368487	2	-6.6923
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	72368779	81885108	5453	0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	81885410	81885492	2	-3.8212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	81888188	123856020	20815	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	123863412	123864738	5	-3.6886
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	123864764	163990962	23427	0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	163995351	164111308	73	-1.7419
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	164111337	172280332	4485	0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	172281488	172281820	3	-3.1168
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	172283842	174494966	1403	5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	174495170	174499005	3	-2.4653
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	174504349	175013413	347	0.1335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	175013923	175016771	3	-3.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	175022097	181524226	4024	0.0357
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	181525245	181525261	2	-4.7664
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	181525864	188163966	3641	-0.014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	188164921	188165200	5	-5.039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	188167058	188274935	86	-0.0758
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	188275936	188276396	2	-3.2018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	188276673	194363167	4162	0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	194363281	194363536	4	-2.878
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	194365098	196110340	1092	-0.049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	196110825	196110998	2	-3.8027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	196115404	199380515	1437	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	2281	6015495	2960	0.0161
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	6016160	6017519	3	-2.973
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	6017566	8472657	1644	0.022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	8472673	8487186	3	-3.7972
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	8494018	9819488	709	0.0338
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	9823258	9839895	23	-2.0393
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	9839910	11056067	1001	0.009
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	11056931	11057280	3	-3.1632
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	11057742	12680286	1227	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	12680593	12681683	3	-3.7588
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	12682509	44700512	20190	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	44700609	44701092	4	-2.8834
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	44705726	58201054	5996	0.0136
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	58202774	58202932	5	-2.0425
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	58207096	58297471	85	-0.1167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	58298296	58298340	2	-2.7903
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	58298389	65093110	3738	0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	65095384	65095424	2	-4.606
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	65096776	79350765	8165	0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	79351626	79352134	2	-6.7259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	79352279	83068258	2127	0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	83069888	83069995	2	-3.8333
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	83072138	129997526	26801	0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	129998526	129998980	2	-3.8793
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	130001726	141043992	6305	0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	141044042	141044880	2	-3.7057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	141047466	142929173	1093	0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	142929779	142930198	2	-3.5146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	142931615	162099591	11148	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	162099647	162104573	25	-2.0988
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	162104615	184050141	13674	0.0182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	184050419	184050451	2	-5.4945
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	184052288	189613517	3521	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	189614712	189617215	3	-4.6321
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	189621068	190179912	423	0.0532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	190184856	190184980	2	-3.1196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	190185876	191261904	573	0.0989
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	5	68532	106916682	61284	0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	5	106925659	106925818	2	-5.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	5	106925876	180722926	45421	-0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	94661	1918578	1450	-6e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	1918840	1921722	5	-3.6928
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	1922442	7656596	4337	-0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7657628	7657701	2	-3.7727
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7658979	7920830	200	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7921454	7922405	4	-4.1976
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7923227	29958253	14283	-0.0064
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	29958345	30029106	34	-0.8097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	30029202	31374314	521	-0.0565
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	31374366	31377501	9	-2.8523
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	31380442	31551889	144	-0.1206
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	31554345	31554775	5	-6.5115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	31556512	31565612	12	-0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	31573009	31573469	4	-3.6281
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	31582667	71783440	21469	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	71784285	71785740	4	-3.7
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	71789723	73147595	893	0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	73148072	73148099	2	-2.9027
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	73148973	81400723	5091	0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	81401795	81409258	10	-1.4516
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	81409330	103841522	13285	-0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	103844669	103868754	45	-1.8283
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	103872163	150454280	28075	0.0353
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	150454451	150457895	3	-6.4294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	150460808	150712592	175	-0.1031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	150714908	150719447	3	-4.9265
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	150719483	165294872	9834	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	165297728	165297987	3	-5.6819
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	165303784	169109675	2555	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	169109895	169110065	2	-4.1269
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	169111115	170892930	1004	0.0224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	52911	50498710	33533	0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	50499175	50499488	4	-5.0716
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	50501821	54353999	2804	0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	54354003	54354011	5	-2.787
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	54360982	77547274	8864	0.0325
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	77548871	77549226	4	-2.5783
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	77551861	77580729	17	-0.1014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	77582124	77582395	2	-6.4743
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	77582947	127701107	29245	0.0278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	127701578	127702612	2	-5.3082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	127703350	158819765	18493	0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	21254	14589022	12493	0.0138
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	14594527	14594831	3	-3.4723
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	14596436	18185496	2995	0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	18186004	18186128	2	-6.6087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	18186215	22283216	3118	0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	22283956	22284102	2	-6.6349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	22285189	38590352	9928	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	38592732	38599562	6	-2.8309
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	38600893	40547722	1171	-0.0109
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	40548155	40548187	2	-3.2822
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	40549614	42158985	938	-0.0238
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	42159107	42165246	2	-2.8507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	42169745	43198051	546	-0.0198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	43198145	43198174	2	-4.1091
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	43200408	106077122	34118	0.0011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	106079376	106080411	2	-4.2447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	106081390	107503008	842	0.0567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	107505652	107506360	2	-4.2474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	107513090	140005297	21394	-0.003
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	140006936	140011376	7	-2.5287
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	140015228	146268959	2992	0.0382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	36587	2386248	2434	0.0102
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	2386521	2386546	2	-3.5154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	2387313	3997769	1312	0.0408
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	3998586	3999019	3	-5.4959
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	3999178	4566995	650	0.0186
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	4567088	4568846	3	-4.4343
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	4570444	7715478	2554	0.0198
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	7715521	7717088	3	-5.4028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	7717388	15289715	6115	0.0367
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	15289735	15289791	2	-3.7802
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	15290968	23351805	6086	0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	23353115	23362399	7	-2.7819
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	23363484	23768056	341	0.014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	23769237	23773166	2	-4.7259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	23773619	26447025	1750	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	26447170	26447404	2	-3.6949
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	26450924	26831184	277	-0.0321
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	26832506	26832670	2	-4.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	26833787	32078488	3693	0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	32078785	32078857	2	-4.149
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	32080238	32879948	567	-0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	32880699	32881041	5	-2.3901
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	32884709	36115629	1717	-0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	36116723	36117196	4	-3.3832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	36119157	44569219	1989	0.0118
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	44667855	44777523	33	0.9246
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	44780914	65356791	96	0.1082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	65356966	65412427	3	-2.875
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	66062879	88782108	12943	-0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	88783787	88784114	2	-3.8877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	88785562	89240321	337	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	89241211	89248508	2	-4.7199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	89250094	100318669	6950	-0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	100318952	100319172	3	-3.5345
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	100320387	100739069	338	0.0177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	100740879	100741412	2	-4.1677
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	100742721	111925563	7843	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	111926761	111930454	4	-4.2092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	111931239	134588424	14350	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	134589718	134590007	3	-4.5912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	134592489	135945024	815	0.0398
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	135951119	135951194	3	-4.7224
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	135953280	140211215	1623	0.0515
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	62809	23246167	17153	-0.0278
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	23246187	23246309	3	-4.9868
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	23249050	90577783	39394	-0.0225
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	90578581	90579096	4	-4.2411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	90580514	91988492	1008	0.0124
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	91988554	91992092	3	-4.5758
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	91992471	97094795	2839	-0.0564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	97095123	97095565	2	-5.5199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	97095862	111013039	8442	-0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	111014900	111015175	2	-3.7455
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	111018685	112852425	1067	-0.0249
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	112855333	112855667	2	-5.0535
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	112856650	131118033	12706	-0.0312
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	131122778	131123023	3	-5.3068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	131128594	135356694	2543	0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	188572	44304378	29172	-0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	44307610	44307816	2	-4.6349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	44309560	45181320	656	-0.0772
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	45185393	45185423	2	-3.3999
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	45187853	55119916	2668	0.0145
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	55130608	55210152	60	0.7411
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	55217259	55426966	146	0.0871
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	55432601	55432875	2	-4.1625
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	55433475	64067028	4573	-0.0037
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	64068729	64068979	2	-4.9825
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	64069867	69120684	1958	-0.0315
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	69122062	69122441	3	-4.2368
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	69123458	78868505	5108	-0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	78870359	78872747	2	-6.0446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	78872905	78907417	33	0.0495
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	78910751	78917044	3	-2.0728
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	78917149	79165637	185	0.0912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	79167580	79167858	5	-2.0488
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	79169880	79645451	322	-0.0274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	79648752	79650581	2	-3.3575
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	79653634	88018176	5618	0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	88019997	88020266	5	-6.358
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	88021766	134449982	31100	-0.004
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	20703	8979972	5497	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	8980539	8982159	4	-5.6193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	8982614	96035193	51722	-0.0032
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	96035560	96040015	4	-4.4546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	96042665	112869783	10334	-0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	112870631	112871022	2	-5.6818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	112871106	114735619	1585	-0.0185
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	114736026	114737218	3	-4.1798
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	114737245	132288262	10781	-3e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	17924949	42673704	16447	-0.0182
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	42675086	42675338	2	-6.0661
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	42679811	64782562	12617	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	64783547	64786214	2	-4.0718
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	64791551	71485477	4140	0.028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	71486210	71486241	2	-3.3439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	71487471	71702901	180	-0.0501
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	71706483	71708337	3	-4.7318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	71711063	79575150	5191	-0.0193
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	79575903	79576015	2	-4.5382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	79579595	107234623	17911	-0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	107238260	107238475	4	-4.0866
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	107244425	112538166	3490	-0.005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	112541419	112541714	4	-2.7994
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	112542249	114126499	614	-0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	18072124	19490079	184	0.4944
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	19492423	57883112	23130	0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	57891682	57892786	2	-4.3019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	57895295	64546178	4042	-0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	64549950	64549961	2	-3.0997
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	64550965	65588328	574	-0.0501
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	65588815	65592648	6	-3.7401
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	65595607	93908993	17112	-0.0184
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	93911253	93912836	4	-4.4045
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	93913318	94597105	619	-0.0784
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	94598615	94599389	2	-7.0751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	94599814	106356482	6510	7e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	18276341	18652835	59	0.0121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	18655543	20085795	357	0.6833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	20088324	31265364	6040	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	31265964	31269440	2	-4.6649
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	31271494	59009436	16853	-0.0101
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	59010354	59015085	7	-3.7005
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	59015462	66753358	4771	-0.0329
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	66753788	66754337	2	-4.8706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	66754473	100286563	20645	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	777	6903771	3932	0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	6904210	6908730	11	-1.7787
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	6909296	26588964	12495	-0.0107
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	26589498	26590923	2	-4.103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	26591646	34283951	2627	0.0399
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	34284436	34284511	4	2.1232
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	34286278	47715749	1668	0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	47716878	47718460	2	-3.446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	47720623	49197883	908	-0.0303
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	49199209	49199489	2	-4.3443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	49199638	54356280	3877	-0.0196
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	54361849	54379898	12	-1.6686
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	54379945	79048819	16055	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	79049388	79050326	2	-6.1087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	79051746	88815036	7326	0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	526	3951070	1962	0.0087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	3954343	3954624	4	-3.7529
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	3954770	5060996	504	-0.0298
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	5065632	5079237	2	6.7122
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	5082524	18260587	8098	-0.0147
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	18296117	18405946	29	1.221
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	18409922	29858052	5584	-0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	29861005	29861106	2	-5.5718
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	29862528	78643088	25982	1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	1543	652370	421	0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	658258	658465	4	-2.177
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	658650	2555103	1297	0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	2562056	2562095	2	-6.0833
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	2566053	10280570	5320	-0.014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	10280985	10281274	2	-7.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	10282864	61872559	30959	-0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	61878472	61879320	12	-2.0898
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	61883718	67527303	3897	0.0277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	67529832	67529846	2	-3.8971
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	67530092	76115554	5903	0.0165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	41910	5442674	1417	0.0893
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	5446197	5457129	4	-3.3634
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	5457457	20386147	6829	-0.0068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	20386516	20513074	72	-0.7896
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	20513302	47982613	10820	-0.0082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	47986230	48225361	101	-0.7766
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	48225966	63789666	7999	-0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	9305	1518737	1119	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	1518752	1541893	32	1.5579
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	1545946	3383475	1243	0.0043
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	3385479	3385622	2	-3.2183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	3386396	4033669	332	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	4034072	4046739	14	-0.9158
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	4049800	4052120	3	-3.5965
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	4056015	9539112	4040	-0.0076
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	9540338	9540598	2	-4.4591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	9543173	15085154	3924	0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	15087345	15087547	2	-4.4694
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	15091794	22462828	5622	-0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	22463122	22463330	3	-5.6082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	22464755	62426597	23293	-0.0058
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	9758742	15937162	1591	0.0416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	15938142	15943077	2	-6.1991
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	15943852	15954879	14	-0.0542
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	15955494	15955845	3	-2.4166
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	15956628	18350139	1472	0.0054
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	18350706	18354018	2	-3.1524
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	18354295	22415287	2948	-0.0022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	22415557	22427180	5	-2.9236
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	22427523	46921385	16840	-0.0096
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	14432528	16170349	543	0.0213
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	16172740	16173206	4	-4.2485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	16176527	24974628	5488	0.0217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	24974715	24989267	14	-1.3613
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	24991500	25067544	70	-0.022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	25069840	25070087	2	-3.0858
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	25070281	25322055	219	-0.0646
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	25327275	25327383	2	2.3175
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	25328710	25400806	46	0.0559
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	25406412	25406596	3	-3.4712
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	25406984	43709383	11460	-0.0115
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	43711824	43716556	4	-3.0803
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	43716607	49581321	3933	0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	108477	12730338	7301	-0.0348
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	12731815	12735560	3	-5.5602
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	12735683	13852876	768	-0.0731
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	13856751	13856877	2	-6.2199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	13857934	15384205	952	0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15384878	15412926	15	-1.2214
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15413724	15419110	7	0.2014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15419609	15421078	6	-0.9121
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15422587	15425240	4	0.019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15427982	15428120	3	2.3245
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15428197	15492232	38	0.1125
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15492668	15494110	4	-5.5529
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	15497425	21919069	3267	-0.0056
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	21922223	21945530	10	-2.2519
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	21945542	23584689	1356	-0.0189
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23585939	23586388	3	-4.9509
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23586813	23724673	84	-0.0485
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23724831	23725902	6	-3.2176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23725919	28762543	2958	-0.0162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	28762785	28766509	6	-3.6531
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	28767319	32839025	2682	-0.026
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	32839883	32840914	5	-3.3584
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	32841697	43506409	6018	-0.0257
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	43506712	43508028	2	-5.2119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	43508249	47203374	1853	-0.0452
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	47206815	47208471	2	-5.9602
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	47209022	47777323	308	-0.0131
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	47778038	47778204	2	-5.9546
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	47779347	58079902	4187	-0.0327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	58081537	58081638	2	-5.2474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	58081928	78658267	7200	-0.0362
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	78658482	78658515	2	-5.9274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	78659755	83887911	2671	-0.048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	83893114	83904371	3	-5.5958
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	83905632	110246066	13695	-0.0263
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	110247287	110253416	4	-3.9693
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	110254821	113231263	1623	-0.013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	113232114	113232500	2	-6.7611
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	113237412	144056996	17301	-0.0418
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	144057292	144057416	2	-6.2402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	144057521	154835548	6161	-0.016
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	Y	2710438	57427647	8520	-0.8783
