Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	3218610	20572454	8704	-0.0153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	20572529	20572894	5	-5.2178
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	20573646	82699804	33316	-0.0111
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	82705547	82712113	6	-2.7665
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	82712893	100944119	10730	-0.002
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	100944262	100944381	2	-5.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	100945780	105658506	2214	-0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105659063	105662965	3	-6.561
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105666486	105746658	43	0.1645
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105748105	105748168	2	-4.5223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	105750769	157909708	12058	-0.0197
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	157911279	157911517	2	-4.2327
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	157913954	159002389	651	0.0216
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	159002778	159006747	3	-4.8267
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	159010153	161930476	1556	-0.0235
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	161930730	161931260	5	-5.5849
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	161933048	206799864	26642	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	206801947	206802440	2	-4.2171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	206803101	211166348	3001	-0.0128
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	211168634	211168993	2	-3.6454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	211184068	222788062	7238	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	222795118	222795769	2	-4.3695
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	222797462	241000812	11176	-0.0153
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	241003220	241003474	3	-3.6807
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	1	241004682	247813706	3400	-0.0191
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	484222	15703438	8916	-0.0155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	15704944	15705044	2	-5.9307
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	15705688	30864326	8520	-0.0146
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	30868942	30872064	3	-6.8699
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	30878949	35424964	2151	-0.0065
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	35429786	35429851	2	-3.5301
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	35430555	36177955	205	0.0741
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	36180123	36180242	4	-5.1475
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	36184659	107547777	33372	-0.0139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	107550686	107553920	2	-6.0493
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	107555246	137032398	13343	-0.0108
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	137037119	137041366	7	-3.0754
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	137043076	137338199	233	-0.0436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	137338940	137339004	2	4.0304
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	137340092	153324632	8640	0.0017
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	153324802	153333513	4	-2.8439
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	153337529	170997810	9736	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	170997821	170999176	4	-5.9313
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	2	171002560	242476062	38658	-0.0098
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	2212571	8548232	3287	-0.0031
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	8548827	8548885	3	-3.1577
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	8549665	38350075	16830	-0.0133
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	38350094	38350134	2	-4.0589
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	38350226	54298824	7789	-0.0277
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	54303189	54316176	9	-1.6624
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	54325356	59618769	3304	-0.0036
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	59618838	59620667	2	-6.8162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	59622110	72282222	7772	-0.0077
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	72282565	72285797	2	-6.6923
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	72286089	81802418	4999	0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	81802720	81802802	2	-3.8165
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	81805498	122373330	19076	0.0063
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	122380722	122382048	5	-3.6818
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	122382074	180041532	28841	0.0019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	180042551	180042567	2	-4.7532
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	180043170	186681272	3050	-0.0038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	186682227	186682506	5	-5.0382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	186684364	186792241	76	-0.0776
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	186793242	186793702	2	-3.2018
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	3	186793979	197538677	5222	-0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	1053934	5964594	2294	0.0106
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	5965259	5966618	3	-2.9712
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	5966665	11446969	2949	0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	11447833	11448182	3	-3.1612
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	11448644	13071188	1100	-0.0126
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	13071495	13072585	3	-3.7578
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	13073411	79131741	34101	0
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	79132602	79133110	2	-6.7259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	79133255	82849234	2075	0.0123
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	82850864	82850971	2	-3.8296
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	4	82853114	188763651	54830	0.0051
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	5	914233	106888783	52958	-0.0021
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	5	106897760	106897919	2	-5.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	5	106897977	180360469	41767	-0.0112
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	1014281	1973579	697	-0.0041
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	1973841	1976723	5	-3.6886
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	1977443	7711597	3796	-0.0195
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7712629	7712702	2	-3.7659
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7713980	7975831	196	0.0097
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7976455	7977406	4	-4.1968
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	7978228	45611655	20140	-0.0105
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	45616443	45620544	3	-2.8998
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	45621142	81344004	16615	-0.0012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	81345076	81352539	10	-1.4492
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	81352611	110159270	15426	0.0243
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	110159855	111246020	625	0.5678
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	111246510	111333851	42	-0.1498
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	111342629	111931468	302	0.497
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	111931687	150670899	21960	-0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	150673215	150677754	3	-4.9255
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	150677790	156946230	4143	0.0081
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	156946895	156954218	4	-1.1223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	156954566	156955041	2	-3.2416
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	156958511	165374882	4540	-0.019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	165377738	165377997	3	-5.6819
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	6	165383794	170903919	2188	-0.0207
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	705284	30981019	15705	0.0094
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	30989506	30989577	2	-4.3324
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	30990935	50531216	11770	0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	50531681	50531994	4	-5.0709
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	50534327	54972561	2942	0.0521
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	54973196	54973762	2	-2.2978
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	54977234	77742793	6287	0.0075
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	77744188	77744459	2	-6.4743
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	7	77745011	158385118	39911	0.0171
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	617667	5121355	2222	0.012
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	5124208	5135793	10	-1.2941
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	5135879	14544651	3842	-0.0072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	14550156	14550460	3	-3.4666
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	14552065	18141216	2431	0.0217
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	18141724	18141848	2	-6.6087
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	18141935	38471195	12167	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	38473575	38480405	6	-2.8294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	38481736	106007946	33999	-0.0013
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	106010200	106011235	2	-4.2447
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	106012214	139936115	20602	-0.0049
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	139937754	139942194	7	-2.527
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	8	139946046	145232496	1649	0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	789932	2396248	931	-0.0024
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	2396521	2396546	2	-3.5114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	2397313	4576995	1571	0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	4577088	4578846	3	-4.4335
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	4580444	7725478	1379	0.0208
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	7725521	7727088	3	-5.4028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	7727388	15299715	3890	0.022
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	15299735	15299791	2	-3.7802
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	15300968	23778056	6008	0.0113
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	23779237	23783166	2	-4.7259
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	23783619	26841184	1573	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	26842506	26842670	2	-4.0084
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	26843787	32889948	3194	-0.0086
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	32890699	32891041	5	-2.3861
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	32894709	36125629	1644	-1e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	36126723	36127196	4	-3.3817
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	36129157	89592288	13795	-0.0154
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	89593967	89594294	2	-3.8877
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	89595742	90050501	320	-0.0234
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	90051391	90058688	2	-4.7139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	90060274	101278848	6563	-0.0048
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	101279131	101279351	3	-3.524
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	101280566	101699248	331	0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	101701058	101701591	2	-4.1627
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	101702900	112885742	6968	-0.0062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	112886940	112890633	4	-4.2072
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	112891418	135598603	13459	-0.011
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	135599897	135600186	3	-4.5912
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	9	135602668	140938752	1971	0.0318
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	415240	23206161	14858	-0.0331
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	23206181	23206303	3	-4.9845
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	23209044	30489779	4640	-0.0448
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	30490082	30496125	2	-3.9938
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	30496246	90587803	30034	-0.0294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	90588601	90589116	4	-4.2397
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	90590534	97104805	3511	-0.0396
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	97105133	97105575	2	-5.5199
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	97105872	107324222	5545	-0.0183
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	107332541	107332574	2	-3.1423
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	107332968	111023049	2359	-0.0266
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	111024910	111025185	2	-3.7422
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	111028695	112862435	983	-0.0337
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	112865343	112865677	2	-5.0458
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	112866660	131228043	12322	-0.0282
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	131232788	131233033	3	-5.3068
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	10	131238604	135225087	1257	-0.0159
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	456120	38180237	22336	-0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	38183232	38183751	2	-4.2001
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	38185309	41430746	1972	0.0074
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	41430789	41430920	3	-3.0813
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	41434518	44347802	1817	0.0066
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	44351034	44351240	2	-4.6349
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	44352984	45224744	618	-0.0662
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	45228817	45228847	2	-3.3999
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	45231277	64310452	5878	-0.0092
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	64312153	64312403	2	-4.9825
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	64313291	79190857	6417	-0.0141
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	79192711	79195099	2	-6.0446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	11	79195257	134140152	33234	-0.007
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	889902	9088705	4186	-0.015
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	9089272	9090892	4	-5.6095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	9091347	97511062	46488	-0.0053
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	97511429	97515884	4	-4.454
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	97518534	116251236	10887	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	116251643	116252835	3	-4.1789
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	12	116252862	133155338	7844	-0.01
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	19450806	80677149	33358	-0.0156
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	80677902	80678014	2	-4.5306
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	80681594	86640772	3206	0.0057
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	86640992	86641078	2	-3.9885
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	86642535	90499964	1928	-0.0223
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	90501346	90509727	15	-1.0955
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	90510923	108436622	11215	-0.0114
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	108440259	108440474	4	-4.0847
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	108446424	113490165	3279	-0.0044
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	113493418	113493713	4	-2.7942
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	13	113494248	114987458	347	-0.0536
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	20501368	58813359	19580	9e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	58821929	58823033	2	-4.3019
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	58825542	65476425	3875	-0.0071
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	65480197	65480208	2	-3.0934
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	65481212	66518575	556	-0.0473
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	66519062	66522895	6	-3.7391
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	66525854	94839240	16185	-0.0176
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	94841500	94843083	4	-4.4038
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	94843565	95527352	612	-0.0816
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	95528862	95529636	2	-7.0751
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	14	95530061	105988038	5534	-0.0127
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	23687685	33478072	3493	-0.02
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	33478672	33482148	2	-4.6564
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	33484202	33521771	31	0.0734
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	33528078	33528427	3	-2.9222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	33529808	34985743	831	-0.0169
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	34985984	34986076	2	-3.2567
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	34987264	40713774	3640	0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	40713849	40714019	3	-2.8103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	40715103	42209672	622	-0.0272
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	42209923	42210023	2	-3.3167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	42210346	42711790	272	0.0104
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	42715944	42717098	2	-3.8162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	42718917	61222144	10475	-0.0116
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	61223062	61227793	7	-3.6994
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	61228170	68966304	4672	-0.0316
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	68966734	68967283	2	-4.8706
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	15	68967419	101884307	17574	-0.0029
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	653459	26681463	11220	-0.0095
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	26681997	26683422	2	-4.103
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	26684145	49158248	2890	-0.0034
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	49159377	49160959	2	-3.446
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	49163122	50640382	894	-0.0265
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	50641708	50641988	2	-4.3443
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	16	50642137	89379936	22992	-0.0083
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	987221	4004321	1241	0.0139
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	4007594	4007875	4	-3.7522
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	4008021	5120272	391	-0.0376
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	5124908	5138513	2	6.7148
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	17	5141800	80917016	32783	-0.0078
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	329586	4350156	1815	-0.0167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	4354518	4358437	2	-4.1583
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	4358654	8467173	2304	-0.0218
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	8467707	8467778	2	-4.2936
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	8467794	10290570	1233	-0.0212
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	10290985	10291274	2	-7.2696
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	18	10292864	77109240	34746	-0.0061
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	284018	5491674	1169	0.0888
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	5495197	5506129	4	-3.3623
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	19	5518860	58878226	20971	-0.008
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	455764	3435475	1754	-0.0089
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	3437479	3437622	2	-3.2155
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	3438396	9591112	3287	-0.0162
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	9592338	9592598	2	-4.4591
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	9595173	22514828	8723	-5e-04
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	22515122	22515330	3	-5.6082
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	20	22516755	62219837	20971	-0.0047
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	15347621	19428268	2342	0.0117
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	19428835	19432147	2	-3.1507
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	19432424	23493416	2653	-0.0014
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	23493686	23505309	5	-2.9222
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	21	23505652	47678295	14282	-0.0152
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	17423930	17790349	190	-0.0297
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	17792740	17793206	4	-4.2479
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	17796527	26644628	1924	-0.0088
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	26644715	26659267	14	-1.3587
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	26661500	26737544	63	-0.0354
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	26739840	26740087	2	-3.0832
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	26740281	26992055	219	-0.062
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	26997275	26997383	2	2.3201
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	26998710	27070806	46	0.0585
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	27076412	27076596	3	-3.4702
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	27076984	44744453	10129	-0.0167
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	44745442	44745583	2	3.4039
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	44745720	45330719	375	0.0629
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	45333160	45337892	4	-3.0785
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	22	45337943	49331012	2612	-0.0143
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	3157107	11908790	2504	-0.0042
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	11908989	11913247	5	-3.8028
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	11916455	12096102	151	0.0366
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	12096394	12098263	2	-4.8414
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	12098279	22009148	4577	-0.0119
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	22012302	22035609	10	-2.2502
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	22035621	23674768	911	-0.0436
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23676018	23676467	3	-4.9509
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23676892	23814752	84	-0.0458
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23814910	23815981	6	-3.2163
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	23815998	47318430	10668	-0.0294
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	47321871	47323527	2	-5.9602
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	47324078	58063177	3748	-0.0239
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	58064812	58064913	2	-5.2474
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	58065203	110359410	18775	-0.0274
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	110360631	110366760	4	-3.9688
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	110368165	137997571	12323	-0.0382
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	137997678	137997771	2	-5.7548
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	137998110	144249304	2537	-0.0289
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	144249600	144249724	2	-6.2402
SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_H07_228800	X	144249829	154905589	4355	-0.0268
