Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	1	3208470	3326481	70	0.066
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	1	3327268	3327412	2	-2.0494
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	1	3328208	245880329	128984	0.0033
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	474222	39898897	23284	0.0106
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	39901408	39903520	2	-1.9041
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	39904516	178544875	72043	0.0092
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	178555035	178567989	9	-1.0525
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	178569971	202131111	11914	0.0072
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	202131640	202131949	3	1.2472
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	202134952	242124735	24039	0.0105
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	3	526235	199023074	106385	0.0036
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	4	1043934	189836143	102738	8e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	5	967233	168579299	93925	0.0011
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	5	168580082	168580178	2	-2.0597
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	5	168582199	180293075	6556	0.0015
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	959281	114113089	62968	0.0039
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	114116360	114117845	2	-1.8066
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	114117973	115333820	698	0.0091
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	115350861	115358421	2	-1.5474
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	115364327	170745844	32803	-2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	7	671810	158077879	81323	2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	8	607667	126464176	69828	4e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	8	126468082	126468402	2	-1.6856
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	8	126473280	145304484	11694	0.003
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	9	779932	27446645	16869	0.0025
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	9	27446928	27465912	22	-1.284
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	9	27468709	140058573	51115	0.0034
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	10	405240	135075077	80855	0.0011
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	11	446120	133647740	77260	0.0041
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	12	760163	106094882	60374	0.0035
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	12	106095939	106098440	2	-1.6964
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	12	106099454	131671419	13554	0.0091
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	13	18348806	114005560	56646	0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	14	19571208	86403763	38426	-2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	14	86407651	86412734	12	-1.3893
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	14	86413901	105059083	11005	0.0019
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	15	21238778	99701830	44525	0.0031
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	16	593460	87907437	40854	0.0033
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	17	933971	78510305	36993	0.0019
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	18	319586	75210228	42667	-0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	19	235018	63570038	23947	0.0058
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	20	403764	61690281	37273	0.0023
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	14269492	38814278	15852	0.0036
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	38814454	38814668	3	-1.0981
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	38817750	42427596	2832	0.0055
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	42430728	42432851	2	-2.0039
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	42432971	46503202	1898	-0.0032
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	22	15803930	47717016	16929	0.0074
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	3167107	25646251	9586	-0.0037
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	25646353	25653579	2	-1.8899
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	25653627	78981258	20410	0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	78983563	78983946	5	-1.1018
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	78984858	80981785	968	0.0184
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	80990164	80995122	2	-1.2836
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	80998946	88860863	3732	0.0218
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	88863480	88868065	2	1.3831
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	88869927	101226676	4675	0.0102
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	101229047	101232037	3	-1.5823
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	101234315	154558783	24389	0.0018
