Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	1	3218610	3336621	70	0.066
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	1	3337408	3337552	2	-2.0494
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	1	3338348	247813706	129039	0.0032
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	484222	40045393	23282	0.0106
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	40047904	40050016	2	-1.9041
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	40051012	178836629	72035	0.0092
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	178846789	178859743	9	-1.0525
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	178861725	202422866	11915	0.0071
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	202423395	202423704	3	1.2472
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	2	202426707	242476062	24040	0.0105
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	3	2212571	197538677	106380	0.0036
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	4	1053934	188763651	102743	8e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	5	914233	168646721	93925	0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	5	168647504	168647600	2	-2.0597
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	5	168649621	180360469	6556	0.0013
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	1014281	114006396	62970	0.0039
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	114009667	114011152	2	-1.8066
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	114011280	115227127	698	0.0091
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	115244168	115251728	2	-1.5474
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	6	115257634	170903919	32810	-1e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	7	705284	158385118	81324	2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	8	617667	126394994	69835	5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	8	126398900	126399220	2	-1.6856
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	8	126404098	145232496	11694	0.003
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	9	789932	27456645	16870	0.0025
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	9	27456928	27475912	22	-1.284
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	9	27478709	140938752	51126	0.0034
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	10	415240	135225087	80853	0.0011
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	11	456120	134142530	77250	0.0041
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	12	889902	107570752	60370	0.0035
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	12	107571809	107574310	2	-1.6964
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	12	107575324	133161346	13553	0.0091
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	13	19450806	114987458	56642	0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	14	20501368	87334010	38424	-2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	14	87337898	87342981	12	-1.3893
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	14	87344148	105988038	11005	0.0019
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	15	23687685	101884307	44523	0.0031
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	16	653459	89379936	40789	0.0034
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	17	987221	80917016	36993	0.0019
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	18	329586	77109240	42664	-0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	19	284018	58878226	23947	0.0058
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	20	455764	62219837	37276	0.0023
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	15347621	39892408	15853	0.0036
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	39892584	39892798	3	-1.0981
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	39895880	43554527	2831	0.0056
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	43557659	43559782	2	-2.0039
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	21	43559902	47678774	1897	-0.0032
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	22	17423930	49331012	16928	0.0073
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	3157107	25736330	9587	-0.0038
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	25736432	25743658	2	-1.8899
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	25743706	79094602	20418	0.001
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	79096907	79097290	5	-1.1018
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	79098202	81095129	968	0.0187
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	81103508	81108466	2	-1.2836
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	81112290	88974207	3732	0.0218
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	88976824	88981409	2	1.3831
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	88983271	101340020	4679	0.0102
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	101342391	101345381	3	-1.5823
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_A09_680718	X	101347659	154905589	24392	0.0017
