Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	1	3208470	239125069	125448	-4e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	1	239136050	239136227	2	-2.4015
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	1	239137822	245880329	3606	0.0035
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	2	474222	242124735	131304	0.0064
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	526235	34557871	19248	4e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	34560362	34560716	2	-3.0351
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	34562872	45986440	6772	6e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	45987840	45987844	2	-1.3476
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	45988305	76727748	17954	-1e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	76728537	76728550	2	-1.4744
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	76728703	196355581	61857	-0.0011
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	196355894	196357531	2	-2.3389
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	196362220	199023074	534	0.0267
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	1043934	24653602	14984	0.0016
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	24653732	24654310	3	1.499
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	24654439	109710013	45012	-6e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	109711881	109739714	3	-2.1613
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	109749774	148712177	21289	-0.0028
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	148719626	148720484	4	-1.1862
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	148722748	189836143	21446	-0.0031
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	5	967233	180293075	100497	-5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	959281	122221622	67133	-0.002
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	122222159	122250185	19	0.5535
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	122251223	126460130	2519	0.0031
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	126463296	126495846	30	0.6206
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	126506314	170745844	26774	-0.0024
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	7	671810	41824850	23941	-2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	7	41832921	41832994	2	1.8238
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	7	41833294	158077879	57367	-9e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	8	607667	145304484	81521	0.0015
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	9	779932	117104661	54744	0.0033
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	9	117107787	117110080	3	-1.4737
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	9	117113197	140058573	13255	0.0037
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	10	405240	25250755	17343	0.0013
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	10	25258832	25267658	10	0.5919
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	10	25267872	135075077	63500	-0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	446120	105633899	58337	4e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	105635793	105639662	5	-1.3799
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	105641224	113084808	4596	-0.0015
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	113085047	113085746	2	-1.4308
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	113086252	133647740	14312	0.0019
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	760163	23059284	12927	0.0013
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	23062282	23062430	2	-1.4327
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	23066128	54013019	15535	0
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	54013346	54013450	7	0.7865
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	54014802	65316167	6487	5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	65316563	65317122	3	1.1059
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	65321133	67833388	1890	9e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	67833909	67834063	2	1.6718
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	67834742	131671419	37088	-5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	13	18348806	106180636	51899	-6e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	13	106182239	106182711	2	-1.5449
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	13	106183236	114005560	4749	-0.0038
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	14	19571208	105059083	49444	0
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	21238778	47991858	13467	2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	47994953	47996759	5	-1.1466
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	47997773	99701830	31049	0.0028
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	593460	51019428	17528	0.0067
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	51020960	51021032	2	-1.4531
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	51021137	60002340	6025	7e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	60004023	60004480	2	-1.447
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	60004811	73782523	7655	0.0034
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	73785470	73785484	2	2.1718
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	73787130	80636592	5349	0.0089
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	80640130	80640140	2	-1.3017
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	80640479	81946217	1134	0.0016
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	81947943	81948372	4	-0.9455
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	81948789	81981791	44	-0.0201
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	81984537	81984616	2	-1.2764
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	81984680	87907437	3111	0.0045
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	17	933971	74767849	35584	0.0043
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	17	74768477	74768924	6	0.8859
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	17	74768940	78510305	1399	-0.0072
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	18	319586	7559277	3747	-0.0032
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	18	7562348	7566377	5	-0.9007
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	18	7569993	75210228	38914	8e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	19	235018	63570038	23943	-3e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	20	403764	61690281	37274	0.0024
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	14269492	24507255	6195	-0.0038
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	24510120	24510210	3	1.0358
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	24510827	24919161	258	0.0145
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	24922873	24938841	4	-1.8216
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	24938907	46503202	14121	-0.001
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	22	15803930	47717016	16931	0.0078
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	3167107	54855014	22540	-0.0029
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54855077	54856738	2	2.3978
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54857335	54934631	29	0.0713
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54934753	54935196	2	1.4093
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54936191	88860863	12132	0.0051
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	88863480	88868065	2	-1.446
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	88869927	100874699	4471	0.006
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	100875664	100886898	10	-0.6749
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	100887262	154558783	24581	0.001
