Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	1	3218610	241058446	125504	-4e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	1	241069427	241069604	2	-2.4015
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	1	241071199	247813706	3605	0.0036
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	2	484222	242476062	131296	0.0064
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	2212571	10765914	4920	0.0029
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	10767407	10774151	3	-1.0508
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	10775548	34582867	14323	-1e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	34585358	34585712	2	-3.0351
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	34587868	46011436	6773	6e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	46012836	46012840	2	-1.3476
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	46013301	76645058	17952	-1e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	76645847	76645860	2	-1.4744
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	76646013	194874292	61854	-0.0011
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	194874605	194876242	2	-2.3389
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	3	194880931	197538677	534	0.0267
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	1053934	25044504	14984	0.0016
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	25044634	25045212	3	1.499
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	25045341	109490564	45013	-6e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	109492432	109520265	3	-2.1613
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	109530325	148492727	21293	-0.0029
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	148500176	148501034	4	-1.1862
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	4	148503298	188763651	21446	-0.0031
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	5	914233	180360469	100497	-5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	1014281	122179923	67139	-0.002
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	122180460	122208486	19	0.5535
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	122209524	126418437	2519	0.0031
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	126421603	126454153	30	0.6206
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	6	126464621	170903919	26777	-0.0024
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	7	705284	41858325	23942	-2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	7	41866396	41866469	2	1.8238
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	7	41866769	158385118	57367	-9e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	8	617667	145232496	81528	0.0015
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	9	789932	118064840	54755	0.0033
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	9	118067966	118070259	3	-1.4737
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	9	118073376	140938752	13256	0.0037
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	10	415240	25210749	17343	0.0013
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	10	25218826	25227652	10	0.5919
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	10	25227866	135225087	63498	-0.0012
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	456120	106128689	58329	4e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	106130583	106134452	5	-1.3799
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	106136014	113579598	4594	-0.0016
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	113579837	113580536	2	-1.4308
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	11	113581042	134142530	14312	0.0019
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	889902	23168017	12924	0.0013
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	23171015	23171163	2	-1.4327
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	23174861	55726752	15534	0
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	55727079	55727183	7	0.7865
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	55728535	67029900	6486	5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	67030296	67030855	3	1.1059
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	67034866	69547121	1890	9e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	69547642	69547796	2	1.6718
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	12	69548475	133161346	37088	-5e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	13	19450806	107382635	51895	-6e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	13	107384238	107384710	2	-1.5449
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	13	107385235	114987458	4749	-0.0038
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	14	20501368	105988038	49442	0
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	23687685	50204566	13468	2e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	50207661	50209467	5	-1.1466
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	50210481	92431925	25251	0.0024
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	92432507	92432556	2	-1.3799
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	15	92432712	101884307	5793	0.005
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	653459	52461927	17528	0.0067
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	52463459	52463531	2	-1.4531
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	52463636	61444839	6025	7e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	61446522	61446979	2	-1.447
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	61447310	75225022	7590	0.0037
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	75227969	75227983	2	2.1718
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	16	75229629	89379936	9646	0.0055
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	17	987221	77256254	35584	0.0043
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	17	77256882	77257329	6	0.8859
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	17	77257345	80917016	1399	-0.0072
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	18	329586	7569277	3749	-0.003
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	18	7572348	7576377	5	-0.9007
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	18	7579993	77109240	38909	8e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	19	284018	58878226	23943	-3e-04
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	20	455764	62219837	37277	0.0024
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	15347621	25585384	6195	-0.0038
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	25588249	25588339	3	1.0358
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	25588956	25997290	257	0.0141
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	26001002	26016970	4	-1.8216
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	21	26017036	47678774	14121	-0.001
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	22	17423930	49331012	16930	0.0078
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	3157107	54838289	22542	-0.0029
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54838352	54840013	2	2.3978
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54840610	54917906	29	0.0713
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54918028	54918471	2	1.4093
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	54919466	88974207	12140	0.0051
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	88976824	88981409	2	-1.446
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	88983271	100988043	4474	0.006
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	100989008	101000242	10	-0.6749
BIKES_p_TCGAb62_SNP_N_GenomeWideSNP_6_C06_680700	X	101000606	154905589	24585	0.001
