Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	3208470	238949987	125363	0.2678
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	238952828	240071967	838	2.663
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	240075450	240079229	14	-0.4359
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	240079662	241754948	932	2.6109
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	241757899	242172301	300	2.9132
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	242176281	242513062	236	2.5416
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	242516143	243388889	356	-0.5822
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	1	243389223	245880329	1070	0.2629
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	474222	57303740	33363	0.2151
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	57304118	57308976	2	-1.6105
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	57314548	178200910	61783	0.2162
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	178200968	178202016	2	-1.2421
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	178204307	202427995	12292	0.2227
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	202435281	202564207	82	-0.6486
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	2	202567683	242124735	23799	0.2149
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	526235	56316554	31431	-0.028
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	56317962	56318584	3	-1.234
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	56320104	57001884	399	-0.0184
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	57006509	57006856	2	-1.474
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	57007281	98179227	20568	-0.0129
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	98188069	98446048	132	-0.5406
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	98450248	158387519	33345	-0.0189
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	158397315	158713437	217	-1.142
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	3	158716090	199023074	20309	-0.0168
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	1043934	65502101	35764	-0.0237
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	65527029	66551394	667	-1.1289
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	66584122	66799785	115	-0.0111
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	66800153	68770310	1113	-1.1328
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	68781853	70556846	223	-0.0169
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	70571922	72138031	707	-1.1301
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	72138277	72169320	15	-0.3517
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	72176577	72454322	171	-1.1413
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	72468908	72568457	32	0.0103
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	72572303	73619072	548	-1.1046
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	73626029	80524203	4238	-0.0299
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	80524471	80525355	2	-1.9135
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	80526598	119691346	22081	-0.0156
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	119704793	119706984	2	1.7745
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	119710512	139370391	10129	-0.0118
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	139371302	139372068	4	-1.2576
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	139372087	140864723	1017	-0.018
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	140865722	140868325	2	-1.5947
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	140868855	144356751	2178	-0.0218
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	144356809	145621511	575	0.535
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	4	145622622	189836143	23162	-0.019
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	5	967233	1481514	125	0.0624
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	5	1943233	12613205	8076	-0.5334
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	5	12616693	12672289	30	0.1651
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	5	12676502	12712630	29	-0.5288
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	5	12801834	180293075	92251	0.0869
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	959281	24430016	16412	-0.5614
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	24433788	24434264	2	-2.7745
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	24436685	42707682	8801	-0.5768
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	42713510	42715376	2	-2.6076
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	42715819	56744355	8396	-0.5571
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	56745236	56749211	2	1.0727
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	56752464	56808420	31	-0.5851
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	56817940	64688408	1310	0.0498
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	64691523	67561083	1538	-0.5675
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	67561703	67562087	2	-2.7243
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	6	67564026	170745844	59906	-0.5442
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	671810	18740024	9028	0.5938
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	18740160	18740187	2	-0.7932
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	18740248	54756184	23164	0.5868
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	54761448	54872844	94	2.3346
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	54873168	55176338	326	2.694
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	55176421	55235414	69	2.4025
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	7	55236410	158077879	48660	0.5834
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	607667	23206616	12783	-0.4197
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	23210076	23210545	2	-2.3794
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	23213238	99065068	41214	-0.4216
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	99065203	99065404	2	-2.6498
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	99065821	133723883	20918	-0.4201
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	133727142	133733145	2	-2.3438
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	133737573	135004082	1069	-0.4155
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	135004568	135004745	2	-2.488
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	8	135005767	145304484	5515	-0.421
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	779932	7142400	3701	0.2162
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	7142636	7142828	2	-1.2382
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	7143489	17571422	6420	0.2445
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	17711988	19672676	1728	-0.5379
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	19673072	19673207	2	-2.6922
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	19674839	21944953	1623	-0.5477
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	21946078	21989240	24	-3.393
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	21989615	21995330	24	-1.5939
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	21995394	22165292	133	-3.8824
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	22166251	22189230	8	-0.5746
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	9	22191586	140058573	54360	0.2043
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	10	405240	2339133	1011	-0.5562
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	10	2339357	2339567	2	-3.0069
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	10	2340773	43340473	25723	-0.5606
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	10	43341728	43341775	2	-3.7154
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	10	43342491	135075077	54034	-0.5471
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	446120	36504443	23306	-0.0344
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	36512771	36528353	13	-0.5533
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	36529598	55771355	7211	-0.0443
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	55773069	55773232	2	-2.7042
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	55773272	88290992	17237	-0.06
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	88298791	88857515	301	0.4845
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	88858779	95843949	4131	-0.0222
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	95844429	95882837	20	-1.0101
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	95926465	103479298	4923	-0.0401
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	103480386	103480387	2	-2.1556
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	11	103482157	133647740	20123	-0.0362
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	12	760163	131671419	73967	0.2069
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	13	18348806	47486739	18464	0.0684
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	13	47501842	48624350	799	-0.8819
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	13	48624753	114005560	37407	0.0875
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	14	19571208	20300040	464	-0.5239
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	14	20300174	20300264	2	-2.3633
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	14	20300416	40452095	10811	-0.4904
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	14	40452220	40452545	2	-4.4598
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	14	40455255	105059083	38129	-0.5071
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	15	21238778	40368874	9379	-0.565
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	15	40371353	99701830	35152	0.2534
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	16	593460	87907437	40866	-0.0383
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	17	933971	66550926	31492	0.1913
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	17	66551678	66552470	3	-1.0183
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	17	66554532	70530218	2266	0.2281
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	17	70536391	70537414	2	-1.0424
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	17	70539112	78510305	3233	0.163
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	18	319586	5925865	2957	5e-04
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	18	5925963	5948901	30	-1.1122
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	18	6593954	37385579	17591	0.0114
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	18	37387744	37389349	5	-1.2179
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	18	37389596	75210228	22091	0.0059
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	19	235018	46998190	17272	0.195
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	19	47001526	47100279	53	0.5329
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	19	47106470	63570038	6633	0.1807
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	20	403764	61690281	37283	0.2201
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	21	14269492	21897983	4877	0.2532
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	21	21901744	21902747	3	-1.1887
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	21	21904445	46503202	15709	0.2272
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	22	15803930	47717016	16913	-0.5737
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A03_292900	X	3167107	154558783	63782	2e-04
