Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	1	3208470	31064325	14727	0.0512
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	1	31065195	31125302	55	0.5884
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	1	31126664	234190953	106804	0.0713
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	1	234191208	234296436	80	0.3896
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	1	234298006	245880329	7370	0.073
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	474222	41884842	24428	0.0171
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	41892705	41936336	79	-0.5626
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	41941651	212956563	88949	0.0425
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	212957067	212957489	2	-2.0686
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	212961771	226218503	8449	0.0518
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	226218537	226220458	2	-1.5833
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	2	226222706	242124735	9292	0.0606
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	3	526235	85421044	48516	0.0686
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	3	85428309	85518730	42	0.5179
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	3	85522304	175532099	45800	0.0717
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	3	175533609	175533732	2	-2.454
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	3	175535423	199023074	11988	0.0743
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	4	1043934	5167148	1835	-0.0051
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	4	5167192	5167341	2	-2.1729
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	4	5169070	183251489	98386	0.0121
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	4	183251872	183253938	2	-2.4539
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	4	183258073	189836143	2450	0.0114
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	5	967233	4456959	2184	0.3966
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	5	4457499	4459997	5	-0.2228
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	5	4460065	4715521	204	0.3592
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	5	4717457	75494467	37643	0.0517
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	5	75504763	75504790	2	2.9755
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	5	75510000	180293075	60428	0.0669
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	959281	18836987	12441	0.1043
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	18839757	19203871	293	1.2923
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	19214239	19494068	185	0.1208
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	19494126	20032434	397	1.2848
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	20034517	20687102	468	2.0375
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	20688175	21094979	272	1.6412
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	21101405	21850586	460	1.3254
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	21853381	23050192	956	0.1228
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	23052946	23433909	268	-0.176
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	23437848	23490064	35	1.3229
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	23493023	23844310	275	0.0863
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	23863103	25528971	1139	1.2738
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	25530332	25531286	3	0.2713
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	25531982	25871536	57	1.323
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	25872171	26113440	169	-0.2103
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	26116239	64943297	17678	0.0946
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	64943817	64945659	2	1.9718
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	64945883	129838227	36476	-0.0676
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	129838313	166821031	23470	-0.5187
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	166823337	166823740	2	-3.04
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	6	166823874	170745844	1305	-0.531
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	671810	24001652	12189	0.4889
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	24006403	24006908	2	2.2754
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	24007342	51674324	17938	0.478
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	51675610	51678338	2	-1.0263
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	51678451	99665171	20590	0.4713
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	99667048	99689872	6	1.0252
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	99690687	105676497	2912	0.4567
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	105677142	105677534	2	-1.3827
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	7	105687471	158077879	27697	0.4834
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	8	607667	145304484	81494	-0.0117
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	9	779932	140058573	67986	0.0692
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	10	405240	30128956	20449	-0.5982
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	10	30129175	30130784	6	-3.6877
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	10	30130870	135075077	59947	-0.5776
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	446120	60575997	33217	-0.1856
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	60576272	60576287	2	-2.9838
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	60578022	76225838	6910	-0.2106
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	76225856	76226860	2	-2.3321
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	76228590	78401371	1228	-0.219
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	78403390	78422312	21	0.262
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	78422844	78428022	5	0.7605
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	11	78431547	133647740	35763	-0.1842
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	760163	66073037	35535	0.023
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	66077836	66138734	62	2.3137
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	66139140	66627312	345	2.8865
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	66629807	66896602	227	2.5416
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	66901467	66901854	5	-0.5035
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	66902541	67269303	288	2.4589
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	67269487	67270107	3	-0.3671
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	67271472	67308707	19	2.5938
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	67308987	67701640	263	3.2168
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	67703840	72071344	2561	0.0293
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	72074103	72104775	10	-0.6608
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	12	72109355	131671419	34589	0.023
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	13	18348806	38365391	12561	-0.1801
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	13	38365496	114005560	43887	-0.5479
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	14	19571208	105059083	49431	0.0553
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	15	21238778	59196152	20838	0.0225
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	15	59196163	59196370	2	-1.7882
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	15	59198382	64198118	3102	0.0176
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	15	64198322	64312931	97	0.4214
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	15	64313225	99701830	20460	0.0227
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	16	593460	87907437	40837	0.0814
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	17	933971	7224019	3010	-0.2272
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	17	7225828	7226019	2	-2.0231
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	17	7226555	8559997	632	-0.227
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	17	8561175	8561373	3	-2.3671
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	17	8562915	78510305	33307	-0.0724
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	18	319586	14356663	8147	0.0872
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	18	14358811	14362350	3	-1.3055
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	18	14369514	75210228	34502	0.0865
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	235018	5621558	1390	0.3846
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	5622821	7255492	637	-0.0071
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	7260687	7295986	5	0.7505
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	7303015	7609211	115	-0.0304
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	7609696	41255589	12456	0.4296
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	41256598	41262236	4	1.7014
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	41264404	47150373	2731	0.4165
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	47161174	52534315	2093	0.0338
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	52539501	52758409	113	-0.5623
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	52764301	53463095	423	0.0343
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	53467186	55870704	738	-0.5555
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	55871709	56420453	239	0.068
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	56421406	56954899	380	-0.5994
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	56961899	57384108	50	0.0491
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	57387792	59228416	512	-0.5506
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	59228891	59640277	110	0.0169
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	19	59641579	63570038	1944	0.4273
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	20	403764	55379775	33221	0.0768
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	20	55383042	55499249	73	0.448
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	20	55499582	61690281	3961	0.0936
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	21	14269492	38710781	15662	0.0881
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	21	38714311	38714617	2	-2.127
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	21	38715509	46503202	4909	0.0827
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	22	15803930	22409593	964	0.0148
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	22	22410163	22508279	31	0.3715
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	22	22512325	47717016	15935	0.0247
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	3167107	37999318	15372	3e-04
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	38000186	38000429	2	-4.1296
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	38001666	45615822	3665	-0.0076
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	45619295	45619791	2	-3.2516
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	45620371	46332288	332	0.0193
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	46334970	46345843	4	-2.3823
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	46346480	65337319	5470	-0.0082
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	65337334	65341013	2	-2.6089
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	65341266	78873612	4892	-0.0066
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	78873762	78873863	2	-3.48
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	78887315	116820700	16469	-0.0047
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	116821099	116821652	2	-3.4281
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	116821956	122116947	2678	-0.0012
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	122117002	122117480	3	-3.2556
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	122119683	131978726	4510	-0.0095
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	131980287	131982823	3	-3.2892
COTES_p_TCGAaffxB8_9a_S_GenomeWideSNP_6_A09_292912	X	131983263	154558783	9910	-0.0063
