Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	1	3218610	247813706	128994	-0.002
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	484222	136049620	70309	0.0058
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	136059116	136065175	2	-1.4385
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	136068800	137877198	1160	-0.0127
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	137877219	137877266	2	-1.5399
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	137877593	140558741	1108	0.0039
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	140567473	140569795	5	-0.681
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	140569815	140652285	60	-0.0139
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	140652420	140655960	4	-1.2222
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	2	140657307	242476062	58499	0.0015
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	3	2212571	18383336	9795	0.0017
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	3	18384052	18387333	6	-0.759
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	3	18387611	23480526	2431	-1e-04
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	3	23486642	23490881	6	-1.0195
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	3	23500227	197538677	94036	8e-04
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	1053934	61405252	33551	0.0023
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	61427729	61429892	8	-0.8158
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	61434327	90827958	16246	-0.0015
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	90828388	90838130	11	-0.6029
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	90844992	136578475	24454	-0.0042
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	136582467	136592279	10	-0.6494
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	136592458	157314808	11862	0.0031
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	157315210	157328558	12	-0.5593
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	4	157330700	188763651	16447	0.0092
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	914233	23843070	13887	0.0133
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	23845881	23845886	2	-1.8347
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	23848060	97703737	38127	-5e-04
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	97704018	97715413	11	-0.5759
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	97719387	100631331	858	-0.0077
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	100633214	100636096	10	-0.9895
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	100640659	107614663	3589	-0.0166
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	107618033	107660003	28	-0.378
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	107660213	114869017	4557	0.0033
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	114869591	114877920	7	-0.8191
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	5	114882704	180360469	39321	0.0013
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	1014281	55365818	32863	0.0017
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	55366347	55376153	19	-0.5783
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	55376167	55741395	207	-0.0184
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	55741888	55768536	17	-0.3987
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	55770376	64771495	1931	-0.0089
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	64778726	65426814	319	-0.9323
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	65453785	67147285	877	-0.008
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	67148659	67153686	12	-0.8626
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	67154369	69081143	1194	0.0257
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	69081965	69084796	6	-0.6411
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	69085362	69502611	222	-0.0286
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	69503064	69503099	2	-2.0032
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	69503216	94032507	14051	0.0017
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	94033432	94040980	9	-0.7734
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	94041109	94055047	12	-0.3874
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	94056662	96652397	779	-0.0514
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	96658413	96662601	10	-0.6687
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	96662961	96981124	172	0.0237
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	96985531	96996610	12	-0.3949
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	96999089	97111690	81	0.0176
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	97112372	97119398	13	-0.4282
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	97119800	101724905	2669	0.0015
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	101724972	101727922	7	-0.6677
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	101727949	117261069	9144	0.0019
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	117266232	117268826	13	-0.5332
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	117269582	120906505	1768	-0.0065
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	120907952	120920346	13	-0.7198
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	120920565	122570110	846	0.0087
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	122580445	122580678	2	-1.3128
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	122581103	124414154	1021	-0.007
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	124414412	124415759	2	-1.5604
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	124416548	128325923	2309	-0.0101
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	128327760	128339824	8	-0.6909
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	6	128339840	170903919	25760	0.0146
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	705284	108577821	55050	0.0039
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	108589195	108634865	37	0.5955
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	108636269	108733279	74	-0.0607
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	108738937	108784879	23	0.607
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	108789316	110495248	970	-0.0017
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	110495462	110496272	2	-1.3428
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	7	110500468	158385118	25071	0.0024
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	617667	13746861	5895	0.0188
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	13749772	13755907	13	-0.7885
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	13756767	59707763	25637	0.0099
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	59707951	59710250	7	-1.1612
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	59710386	110751358	28846	0.0016
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	110756771	110756864	2	-1.5738
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	110756904	133781528	14550	0.0035
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	133782186	133815871	25	-0.3314
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	8	133825798	145232496	6470	0.0085
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	9	789932	3276396	1760	0.0086
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	9	3279135	3287307	10	-0.687
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	9	3288470	140938752	66193	-0.0024
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	10	415240	43524628	26406	0.012
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	10	43524701	43525742	2	-1.7228
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	10	43526023	92153969	27527	-0.0019
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	10	92155657	92159044	5	-0.9786
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	10	92160170	135225087	26846	0.0015
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	456120	16402205	9748	0.006
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	16403001	16426725	21	-0.4759
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	16429634	21343129	3696	-0.0025
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	21345128	21364574	25	-0.3972
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	21366588	24543734	2004	-0.0259
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	24549488	24558167	11	-0.7138
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	24558963	24751469	130	0.0459
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	24751744	24759043	18	-0.6597
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	24761831	90228690	32656	-0.0075
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	90229564	90247738	26	-0.5512
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	11	90248631	134142530	28819	0.0016
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	12	889902	75150281	39960	-0.0017
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	12	75155047	75165070	20	-0.7706
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	12	75167819	85734723	6556	-0.0105
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	12	85735978	85749416	14	-0.8528
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	12	85749793	133161346	27300	5e-04
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	13	19450806	88101003	39408	0.002
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	13	88107127	88119297	5	-1.1149
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	13	88121368	93368053	3114	-0.004
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	13	93374260	93386386	12	-0.6874
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	13	93388981	114987458	14020	0.0117
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	14	20501368	27360305	3302	-0.005
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	14	27363974	27370754	7	-0.9039
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	14	27374640	42317467	8484	-0.001
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	14	42318289	42321647	10	-0.6039
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	14	42321934	105988038	37570	0.0038
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	15	23687685	101884307	44475	0.006
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	16	653459	59745634	22527	-2e-04
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	16	59745718	59745776	2	-1.5773
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	16	59748615	61758741	1167	-0.0047
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	16	61760893	61765101	6	-0.8836
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	16	61768981	89379936	17059	0.0052
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	17	987221	80917016	36963	-0.0028
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	18	329586	56315336	31480	0.0021
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	18	56318033	56321254	5	-0.8822
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	18	56323879	77109240	11127	0.0147
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	19	284018	58878226	23932	-0.0024
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	20	455764	62219837	37259	9e-04
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	15347621	18110285	1698	-0.0017
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	18122773	18123473	2	-1.3499
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	18125164	23136053	3282	0.0055
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	23136185	23141222	13	-0.5374
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	23142841	26604764	1896	0.0029
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	26605984	26606219	3	-1.1298
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	21	26606444	47678774	13672	0.0132
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	22	17423930	49331012	16918	-0.0059
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	3157107	21571868	7400	0.0147
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	21573526	21582181	6	-0.6647
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	21582296	26341278	2541	0.0096
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	26342073	26347313	6	-0.6808
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	26348907	32455707	3513	0.003
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	32456711	32487198	15	-0.5881
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_C01_809436	X	32487337	154905589	50245	7e-04
